1
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Bösch A, Macha ME, Ren Q, Kohler P, Qi W, Babouee Flury B. Resistance development in Escherichia coli to delafloxacin at pHs 6.0 and 7.3 compared to ciprofloxacin. Antimicrob Agents Chemother 2023; 67:e0162522. [PMID: 37882542 PMCID: PMC10649057 DOI: 10.1128/aac.01625-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 09/08/2023] [Indexed: 10/27/2023] Open
Abstract
Understanding the resistance mechanisms of antibiotics in the micro-environment of the infection is important to assess their clinical applicability and potentially prevent resistance development. We compared the laboratory resistance evolution of Escherichia coli to delafloxacin (DLX) compared to ciprofloxacin (CIP), the co-resistance evolution, and underlying resistance mechanisms at different pHs. Three clones from each of the eight clinical E. coli isolates were subjected to subinhibitory concentrations of DLX or CIP in parallel at either pH 7.3 or 6.0. Minimum inhibitory concentrations (MICs) were regularly tested (at respective pHs), and the antibiotic concentration was adjusted accordingly. After 30 passages, MICs were determined in the presence of the efflux pump inhibitor phenylalanine-arginine-β-naphthylamide. Whole genome sequencing of the parental isolates and their resistant derivatives (n = 54) was performed. Complementation assays were carried out for selected mutations. Quantitative PCR and efflux experiments were carried out for selected derivatives. For DLX-challenged strains, resistance to DLX evolved much slower in acidic than in neutral pH, whereas for CIP-challenged strains, the opposite was the case. Mutations in the quinolone resistance-determining region were mainly seen in CIP-challenged E. coli, whereas a multifactorial mechanism including mutations in efflux-related genes played a role in DLX resistance evolution (predominantly at pH 6.0). This work provides novel insights into the resistance mechanisms of E. coli to delafloxacin and highlights the importance of understanding micro-environmental conditions at the infection site that might affect the true clinical efficacy of antibiotics and challenges our current antibiotic susceptibility-testing paradigm.
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Affiliation(s)
- Anja Bösch
- Medical Research Center, Kantonsspital St. Gallen, St. Gallen, Switzerland
- Division of Infectious Diseases and Hospital Epidemiology, Kantonsspital St. Gallen, St. Gallen, Switzerland
| | - Magreth E. Macha
- Medical Research Center, Kantonsspital St. Gallen, St. Gallen, Switzerland
- St. Francis University College of Health and Allied Sciences, Morogoro, Tanzania
| | - Qun Ren
- Laboratory for Biointerfaces, Empa, Swiss Federal Laboratories for Materials Science and Technology, St. Gallen, Switzerland
| | - Philipp Kohler
- Division of Infectious Diseases and Hospital Epidemiology, Kantonsspital St. Gallen, St. Gallen, Switzerland
| | - Weihong Qi
- Functional Genomics Center Zurich, University of Zurich, ETH Zurich, Zurich, Switzerland
| | - Baharak Babouee Flury
- Medical Research Center, Kantonsspital St. Gallen, St. Gallen, Switzerland
- Division of Infectious Diseases and Hospital Epidemiology, Kantonsspital St. Gallen, St. Gallen, Switzerland
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2
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Miyabe K, Inaba S, Umeda M. A study on attempt for determination of permeation kinetics of coumarin at lipid bilayer of liposomes by using capillary electrophoresis with moment analysis theory. J Chromatogr A 2023; 1687:463691. [PMID: 36542884 DOI: 10.1016/j.chroma.2022.463691] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Revised: 11/14/2022] [Accepted: 11/28/2022] [Indexed: 11/30/2022]
Abstract
It was tried to develop a moment analysis method for the determination of lipid membrane permeability. The first absolute and second central moments of elution peaks measured by liposome electrokinetic chromatography (LEKC) are analyzed by using moment equations. As a concrete example, elution peak profiles of coumarin in a LEKC system, in which liposomes consisting of 1-palmitoyl-2-oleoyl-sn‑glycero-3-phosphocholine (POPC) and phosphatidylserine (PS) are used as a pseudo-stationary phase, were analyzed. It seems that lipid membrane permeability of coumarin across the lipid bilayer of POPC/PS liposomes was measured by the moment analysis method because previous permeability measurements using parallel artificial membrane permeability assay (PAMPA) and Caco-2 cells indicated that coumarin is permeable across lipid bilayer. However, it was also pointed out that the moment analysis method with LEKC is not effective for the determination of lipid membrane permeability and that it provides information about adsorption/desorption kinetics at lipid bilayer of liposomes. Therefore, different moment equations were also developed for the determination of adsorption/desorption rate constants of coumarin from the LEKC data. It was demonstrated that permeation rate constants at lipid bilayer or adsorption/desorption rate constants can be determined from the LEKC data on the basis of moment analysis theory for the mass transfer phenomena of coumarin at the lipid bilayer of POPC/PS liposomes. Mass transfer kinetics of solutes at lipid bilayer should be determined under the conditions that liposomes originally be because they are self-assembling and dynamic systems formed through weak interactions between phospholipid monomers. The moment analysis method using LEKC is effective for the experimental determination of the mass transfer rate constants at the lipid bilayer of liposomes because neither immobilization nor chemical modification of liposomes is necessary when LEKC data are measured. It is expected that the results of this study contribute to the dissemination of an opportunity for the determination of permeation rate constants or adsorption/desorption rate constants at the lipid bilayer of liposomes to many researchers because capillary electrophoresis is widespread.
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Affiliation(s)
- Kanji Miyabe
- Department of Chemistry, Faculty of Science, Rikkyo University, 3-34-1, Nishi-Ikebukuro, Toshimaku, Tokyo 171-8501, Japan.
| | - Shunta Inaba
- Department of Chemistry, Faculty of Science, Rikkyo University, 3-34-1, Nishi-Ikebukuro, Toshimaku, Tokyo 171-8501, Japan
| | - Momoko Umeda
- Department of Chemistry, Faculty of Science, Rikkyo University, 3-34-1, Nishi-Ikebukuro, Toshimaku, Tokyo 171-8501, Japan
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3
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Light-Switchable Membrane Permeability in Giant Unilamellar Vesicles. Pharmaceutics 2022; 14:pharmaceutics14122777. [PMID: 36559270 PMCID: PMC9780837 DOI: 10.3390/pharmaceutics14122777] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 12/03/2022] [Accepted: 12/06/2022] [Indexed: 12/14/2022] Open
Abstract
In this work, giant unilamellar vesicles (GUVs) were synthesized by blending the natural phospholipid 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) with a photoswitchable amphiphile (1) that undergoes photoisomerization upon irradiation with UV-A (E to Z) and blue (Z to E) light. The mixed vesicles showed marked changes in behavior in response to UV light, including changes in morphology and the opening of pores. The fine control of membrane permeability with consequent cargo release could be attained by modulating either the UV irradiation intensity or the membrane composition. As a proof of concept, the photocontrolled release of sucrose from mixed GUVs is demonstrated using microscopy (phase contrast) and confocal studies. The permeability of the GUVs to sucrose could be increased to ~4 × 10-2 μm/s when the system was illuminated by UV light. With respect to previously reported systems (entirely composed of synthetic amphiphiles), our findings demonstrate the potential of photosensitive GUVs that are mainly composed of natural lipids to be used in medical and biomedical applications, such as targeted drug delivery and localized topical treatments.
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4
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Kaur J, Ghorbanpoor H, Öztürk Y, Kaygusuz Ö, Avcı H, Darcan C, Trabzon L, Güzel FD. On‐chip label‐free impedance‐based detection of antibiotic permeation. IET Nanobiotechnol 2021; 15:100-106. [PMID: 34694729 PMCID: PMC8675796 DOI: 10.1049/nbt2.12019] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Revised: 10/14/2020] [Accepted: 11/02/2020] [Indexed: 12/20/2022] Open
Abstract
Biosensors are analytical tools used for the analysis of biomaterial samples and provide an understanding about the biocomposition, structure, and function of biomolecules and/or biomechanisms by converting the biological response into an electrical and/or optical signal. In particular, with the rise in antibiotic resistance amongst pathogenic bacteria, the study of antibiotic activity and transport across cell membranes in the field of biosensors has been gaining widespread importance. Herein, for the rapid and label‐free detection of antibiotic permeation across a membrane, a microelectrode integrated microfluidic device is presented. The integrated chip consists of polydimethylsiloxane based microfluidic channels bonded onto microelectrodes on‐glass and enables us to recognize the antibiotic permeation across a membrane into the model membranes based on electrical impedance measurement, while also allowing optical monitoring. Impedance testing is label free and therefore allows the detection of both fluorescent and non‐fluorescent antibiotics. As a model membrane, Giant Unilamellar Vesicles (GUVs) are used and impedance measurements were performed by a precision inductance, capacitance, and resistance metre. The measured signal recorded from the device was used to determine the change in concentration inside and outside of the GUVs. We have found that permeation of antibiotic molecules can be easily monitored over time using the proposed integrated device. The results also show a clear difference between bilayer permeation that occurs through the lipidic bilayer and porin‐mediated permeation through the porin channels inserted in the lipid bilayer.
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Affiliation(s)
- Jaspreet Kaur
- Department of Electrical and Electronic Engineering Yıldırım Beyazıt University Ankara Turkey
| | - Hamed Ghorbanpoor
- Department of Biomedical Engineering Yıldırım Beyazıt University Ankara Turkey
| | - Yasin Öztürk
- Department of Material Engineering Yıldırım Beyazıt University Ankara Turkey
| | - Özge Kaygusuz
- Biotechnology Application and Research Center Bilecik Şeyh Edebali University Bilecik Turkey
| | - Hüseyin Avcı
- Metallurgical and Materials Engineering Department Eskisehir Osmangazi University Eskisehir Turkey
- Cellular Therapy and Stem Cell Research Center (ESTEM) Eskisehir Osmangazi University Eskisehir Turkey
- AvciBio Research Group Eskisehir Osmangazi University Eskisehir Turkey
| | - Cihan Darcan
- Biotechnology Application and Research Center Bilecik Şeyh Edebali University Bilecik Turkey
- Department of Molecular Biology and Genetics Bilecik Seyh Edebali University Bilecik Turkey
| | - Levent Trabzon
- Department of Mechanical Engineering Istanbul Technical University Istanbul Turkey
- Nanotechnology Research and Application Center – ITUnano Istanbul Technical University Istanbul Turkey
| | - Fatma D. Güzel
- Department of Biomedical Engineering Yıldırım Beyazıt University Ankara Turkey
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5
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Design and Clinical Application of an Integrated Microfluidic Device for Circulating Tumor Cells Isolation and Single-Cell Analysis. MICROMACHINES 2021; 12:mi12010049. [PMID: 33401770 PMCID: PMC7824094 DOI: 10.3390/mi12010049] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 12/27/2020] [Accepted: 12/30/2020] [Indexed: 12/20/2022]
Abstract
Circulating tumor cells (CTCs) have been considered as an alternative to tissue biopsy for providing both germline-specific and tumor-derived genetic variations. Single-cell analysis of CTCs enables in-depth investigation of tumor heterogeneity and individualized clinical assessment. However, common CTC enrichment techniques generally have limitations of low throughput and cell damage. Herein, based on micropore-arrayed filtration membrane and microfluidic chip, we established an integrated CTC isolation platform with high-throughput, high-efficiency, and less cell damage. We observed a capture rate of around 85% and a purity of 60.4% by spiking tumor cells (PC-9) into healthy blood samples. Detection of CTCs from lung cancer patients demonstrated a positive detectable rate of 87.5%. Additionally, single CTCs, ctDNA and liver biopsy tissue of a representative advanced lung cancer patient were collected and sequenced, which revealed comprehensive genetic information of CTCs while reflected the differences in genetic profiles between different biological samples. This work provides a promising tool for CTCs isolation and further analysis at single-cell resolution with potential clinical value.
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6
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Carbon Source Influence on Extracellular pH Changes along Bacterial Cell-Growth. Genes (Basel) 2020; 11:genes11111292. [PMID: 33142974 PMCID: PMC7693008 DOI: 10.3390/genes11111292] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 10/24/2020] [Accepted: 10/28/2020] [Indexed: 02/07/2023] Open
Abstract
The effect of initial pH on bacterial cell-growth and its change over time was studied under aerobic heterotrophic conditions by using three bacterial strains: Escherichia coli ATCC 25922, Pseudomonas putida KT2440, and Pseudomonas pseudoalcaligenes CECT 5344. In Luria-Bertani (LB) media, pH evolved by converging to a certain value that is specific for each bacterium. By contrast, in the buffered Minimal Medium (MM), pH was generally more stable along the growth curve. In MM with glucose as carbon source, a slight acidification of the medium was observed for all strains. In the case of E. coli, a sudden drop in pH was observed during exponential cell growth that was later recovered at initial pH 7 or 8, but was irreversible below pH 6, thus arresting further cell-growth. When using other carbon sources in MM at a fixed initial pH, pH changes depended mainly on the carbon source itself. While glucose, glycerol, or octanoate slightly decreased extracellular pH, more oxidized carbon sources, such as citrate, 2-furoate, 2-oxoglutarate, and fumarate, ended up with the alkalinization of the medium. These observations are in accordance with pH change predictions using genome-scale metabolic models for the three strains, thus revealing the metabolic reasons behind pH change. Therefore, we conclude that the composition of the medium, specifically the carbon source, determines pH change during bacterial growth to a great extent and unravel the main molecular mechanism behind this phenotype. These findings pave the way for predicting pH changes in a given bacterial culture and may anticipate the interspecies interactions and fitness of bacteria in their environment.
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7
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Schaich M, Sobota D, Sleath H, Cama J, Keyser UF. Characterization of lipid composition and diffusivity in OLA generated vesicles. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2020; 1862:183359. [PMID: 32416194 PMCID: PMC7322398 DOI: 10.1016/j.bbamem.2020.183359] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Revised: 04/15/2020] [Accepted: 05/11/2020] [Indexed: 11/19/2022]
Abstract
Giant Unilamellar Vesicles (GUVs) are a versatile tool in many branches of science, including biophysics and synthetic biology. Octanol-Assisted Liposome Assembly (OLA), a recently developed microfluidic technique enables the production and testing of GUVs within a single device under highly controlled experimental conditions. It is therefore gaining significant interest as a platform for use in drug discovery, the production of artificial cells and more generally for controlled studies of the properties of lipid membranes. In this work, we expand the capabilities of the OLA technique by forming GUVs of tunable binary lipid mixtures of DOPC, DOPG and DOPE. Using fluorescence recovery after photobleaching we investigated the lateral diffusion coefficients of lipids in OLA liposomes and found the expected values in the range of 1 μm2/s for the lipid systems tested. We studied the OLA derived GUVs under a range of conditions and compared the results with electroformed vesicles. Overall, we found the lateral diffusion coefficients of lipids in vesicles obtained with OLA to be quantitatively similar to those in vesicles obtained via traditional electroformation. Our results provide a quantitative biophysical validation of the quality of OLA derived GUVs, which will facilitate the wider use of this versatile platform.
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Affiliation(s)
- Michael Schaich
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Diana Sobota
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Hannah Sleath
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Jehangir Cama
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom; Living Systems Institute, University of Exeter, Stocker Road, Exeter EX4 4QD, United Kingdom; College of Engineering, Mathematics and Physical Sciences, University of Exeter, Harrison Building, Streatham Campus, North Park Road, Exeter EX4 4QF, United Kingdom.
| | - Ulrich F Keyser
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom.
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8
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Mohanan G, Nair KS, Nampoothiri KM, Bajaj H. Engineering bio-mimicking functional vesicles with multiple compartments for quantifying molecular transport. Chem Sci 2020; 11:4669-4679. [PMID: 34122921 PMCID: PMC8159255 DOI: 10.1039/d0sc00084a] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Controlled design of giant unilamellar vesicles under defined conditions has vast applications in the field of membrane and synthetic biology. Here, we bio-engineer bacterial-membrane mimicking models of controlled size under defined salt conditions over a range of pH. A complex bacterial lipid extract is used for construction of physiologically relevant Gram-negative membrane mimicking vesicles whereas a ternary mixture of charged lipids (DOPG, cardiolipin and lysyl-PG) is used for building Gram-positive bacterial-membrane vesicles. Furthermore, we construct stable multi-compartment biomimicking vesicles using the gel-assisted swelling method. Importantly, we validate the bio-application of the bacterial vesicle models by quantifying diffusion of chemically synthetic amphoteric antibiotics. The transport rate is pH-responsive and depends on the lipid composition, based on which a permeation model is proposed. The permeability properties of antimicrobial peptides reveal pH dependent pore-forming activity in the model vesicles. Finally, we demonstrate the functionality of the vesicles by quantifying the uptake of membrane-impermeable molecules facilitated by embedded pore-forming proteins. We suggest that the bacterial vesicle models developed here can be used to understand fundamental biological processes like the peptide assembly mechanism or bacterial cell division and will have a multitude of applications in the bottom-up assembly of a protocell. Giant vesicle functional models mimicking a bacterial membrane under physiological conditions are constructed.![]()
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Affiliation(s)
- Gayathri Mohanan
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST) Trivandrum 695019 Kerala India
| | - Karthika S Nair
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST) Trivandrum 695019 Kerala India
| | - K Madhavan Nampoothiri
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST) Trivandrum 695019 Kerala India
| | - Harsha Bajaj
- Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST) Trivandrum 695019 Kerala India
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9
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On-chip MIC by Combining Concentration Gradient Generator and Flanged Chamber Arrays. MICROMACHINES 2020; 11:mi11020207. [PMID: 32079258 PMCID: PMC7074598 DOI: 10.3390/mi11020207] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/21/2020] [Revised: 02/14/2020] [Accepted: 02/14/2020] [Indexed: 01/31/2023]
Abstract
Minimum inhibition concentration (MIC) of antibiotic is an effective value to ascertain the agent and minimum dosage of inhibiting bacterial growth. However, current techniques to determine MIC are labor intensive and time-consuming, and require skilled operator and high initial concentration of bacteria. To simplify the operation and reduce the time of inhibition test, we developed a microfluidic system, containing a concentration generator and sub-micro-liter chambers, for rapid bacterial growth and inhibition test. To improve the mixing effect, a micropillar array in honeycomb-structure channels is designed, so the steady concentration gradient of amoxicillin can be generated. The flanged chambers are used to culture bacteria under the condition of continuous flow and the medium of chambers is refreshed constantly, which could supply the sufficient nutrient for bacteria growth and take away the metabolite. Based on the microfluidic platform, the bacterial growth with antibiotic inhibition on chip can be quantitatively measured and MIC can be obtained within six hours using low initial concentration of bacteria. Overall, this microfluidic platform has the potential to provide rapidness and effectiveness to screen bacteria and determine MIC of corresponding antibiotics in clinical therapies.
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10
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Breaching the Barrier: Quantifying Antibiotic Permeability across Gram-negative Bacterial Membranes. J Mol Biol 2019; 431:3531-3546. [DOI: 10.1016/j.jmb.2019.03.031] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2018] [Revised: 01/29/2019] [Accepted: 03/28/2019] [Indexed: 11/22/2022]
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11
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Robinson T. Microfluidic Handling and Analysis of Giant Vesicles for Use as Artificial Cells: A Review. ACTA ACUST UNITED AC 2019; 3:e1800318. [PMID: 32648705 DOI: 10.1002/adbi.201800318] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2018] [Revised: 03/22/2019] [Indexed: 01/04/2023]
Abstract
One of the goals of synthetic biology is the bottom-up construction of an artificial cell, the successful realization of which could shed light on how cellular life emerged and could also be a useful tool for studying the function of modern cells. Using liposomes as biomimetic containers is particularly promising because lipid membranes are biocompatible and much of the required machinery can be reconstituted within them. Giant lipid vesicles have been used extensively in other fields such as biophysics and drug discovery, but their use as artificial cells has only recently seen an increase. Despite the prevalence of giant vesicles, many experiments remain challenging or impossible due to their delicate nature compared to biological cells. This review aims to highlight the effectiveness of microfluidic technologies in handling and analyzing giant vesicles. The advantages and disadvantages of different microfluidic approaches and what new insights can be gained from various applications are introduced. Finally, future directions are discussed in which the unique combination of microfluidics and giant lipid vesicles can push forward the bottom-up construction of artificial cells.
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Affiliation(s)
- Tom Robinson
- Department of Theory & Bio-Systems, Max Planck Institute of Colloids and Interfaces, Potsdam, 14424, Germany
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12
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Schaich M, Cama J, Al Nahas K, Sobota D, Sleath H, Jahnke K, Deshpande S, Dekker C, Keyser UF. An Integrated Microfluidic Platform for Quantifying Drug Permeation across Biomimetic Vesicle Membranes. Mol Pharm 2019; 16:2494-2501. [PMID: 30994358 DOI: 10.1021/acs.molpharmaceut.9b00086] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The low membrane permeability of candidate drug molecules is a major challenge in drug development, and insufficient permeability is one reason for the failure of antibiotic treatment against bacteria. Quantifying drug transport across specific pathways in living systems is challenging because one typically lacks knowledge of the exact lipidome and proteome of the individual cells under investigation. Here, we quantify drug permeability across biomimetic liposome membranes, with comprehensive control over membrane composition. We integrate the microfluidic octanol-assisted liposome assembly platform with an optofluidic transport assay to create a complete microfluidic total analysis system for quantifying drug permeability. Our system enables us to form liposomes with charged lipids mimicking the negative charge of bacterial membranes at physiological pH and salt concentrations, which proved difficult with previous liposome formation techniques. Furthermore, the microfluidic technique yields an order of magnitude more liposomes per experiment than previous assays. We demonstrate the feasibility of the assay by determining the permeability coefficient of norfloxacin and ciprofloxacin across biomimetic liposomes.
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Affiliation(s)
- Michael Schaich
- Cavendish Laboratory , University of Cambridge , JJ Thomson Avenue , Cambridge CB3 0HE , U.K
| | - Jehangir Cama
- Cavendish Laboratory , University of Cambridge , JJ Thomson Avenue , Cambridge CB3 0HE , U.K.,Living Systems Institute , University of Exeter , Stocker Road , Exeter EX4 4QD , U.K
| | - Kareem Al Nahas
- Cavendish Laboratory , University of Cambridge , JJ Thomson Avenue , Cambridge CB3 0HE , U.K
| | - Diana Sobota
- Cavendish Laboratory , University of Cambridge , JJ Thomson Avenue , Cambridge CB3 0HE , U.K
| | - Hannah Sleath
- Cavendish Laboratory , University of Cambridge , JJ Thomson Avenue , Cambridge CB3 0HE , U.K
| | - Kevin Jahnke
- Cavendish Laboratory , University of Cambridge , JJ Thomson Avenue , Cambridge CB3 0HE , U.K.,Department of Biophysical Chemistry , University of Heidelberg , Im Neuenheimer Feld 253 , D-69120 Heidelberg , Germany.,Department of Cellular Biophysics , Max Planck Institute for Medical Research , Jahnstraße 29 , D-69120 Heidelberg , Germany
| | - Siddharth Deshpande
- Department of Bionanoscience, Kavli Institute of Nanoscience , Delft University of Technology , Van der Maasweg 9 , 2629 HZ Delft , The Netherlands
| | - Cees Dekker
- Department of Bionanoscience, Kavli Institute of Nanoscience , Delft University of Technology , Van der Maasweg 9 , 2629 HZ Delft , The Netherlands
| | - Ulrich F Keyser
- Cavendish Laboratory , University of Cambridge , JJ Thomson Avenue , Cambridge CB3 0HE , U.K
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13
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Al Nahas K, Cama J, Schaich M, Hammond K, Deshpande S, Dekker C, Ryadnov MG, Keyser UF. A microfluidic platform for the characterisation of membrane active antimicrobials. LAB ON A CHIP 2019; 19:837-844. [PMID: 30698187 PMCID: PMC6404476 DOI: 10.1039/c8lc00932e] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2018] [Accepted: 12/05/2018] [Indexed: 05/21/2023]
Abstract
The spread of bacterial resistance against conventional antibiotics generates a great need for the discovery of novel antimicrobials. Polypeptide antibiotics constitute a promising class of antimicrobial agents that favour attack on bacterial membranes. However, efficient measurement platforms for evaluating their mechanisms of action in a systematic manner are lacking. Here we report an integrated lab-on-a-chip multilayer microfluidic platform to quantify the membranolytic efficacy of such antibiotics. The platform is a biomimetic vesicle-based screening assay, which generates giant unilamellar vesicles (GUVs) in physiologically relevant buffers on demand. Hundreds of these GUVs are individually immobilised downstream in physical traps connected to separate perfusion inlets that facilitate controlled antibiotic delivery. Antibiotic efficacy is expressed as a function of the time needed for an encapsulated dye to leak out of the GUVs as a result of antibiotic treatment. This proof-of-principle study probes the dose response of an archetypal polypeptide antibiotic cecropin B on GUVs mimicking bacterial membranes. The results of the study provide a foundation for engineering quantitative, high-throughput microfluidics devices for screening antibiotics.
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Affiliation(s)
- K. Al Nahas
- Cavendish Laboratory
, Univ. of Cambridge
,
JJ Thomson Avenue
, Cambridge CB3 0HE
, UK
.
| | - J. Cama
- Cavendish Laboratory
, Univ. of Cambridge
,
JJ Thomson Avenue
, Cambridge CB3 0HE
, UK
.
| | - M. Schaich
- Cavendish Laboratory
, Univ. of Cambridge
,
JJ Thomson Avenue
, Cambridge CB3 0HE
, UK
.
| | - K. Hammond
- National Physical Laboratory
,
Hampton Road, Teddington
, Middlesex TW11 0LW
, UK
| | - S. Deshpande
- Kavli Institute of Nanoscience
, Delft Univ. of Technology
,
van der Maasweg 9
, Delft 2629 HZ
, Netherlands
| | - C. Dekker
- Kavli Institute of Nanoscience
, Delft Univ. of Technology
,
van der Maasweg 9
, Delft 2629 HZ
, Netherlands
| | - M. G. Ryadnov
- National Physical Laboratory
,
Hampton Road, Teddington
, Middlesex TW11 0LW
, UK
| | - U. F. Keyser
- Cavendish Laboratory
, Univ. of Cambridge
,
JJ Thomson Avenue
, Cambridge CB3 0HE
, UK
.
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14
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Gong J, Liu J, Tan X, Li Z, Li Q, Zhang J. Bio-Preparation and Regulation of Pyrrole Structure Nano-Pigment Based on Biomimetic Membrane. NANOMATERIALS (BASEL, SWITZERLAND) 2019; 9:E114. [PMID: 30669357 PMCID: PMC6359519 DOI: 10.3390/nano9010114] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/07/2018] [Revised: 01/04/2019] [Accepted: 01/09/2019] [Indexed: 12/18/2022]
Abstract
Microbial pigments, regarded as the most potential biomass pigments, have lately attracted increasing attention in textile dyeing due to their sustainability and cleaner production. The pyrrole structure microbial pigment, called prodigiosin, recently have become a research hotspot for its bright colors and antibacterial function. However, in most case the extraction and preparation are time-consuming and expensive processes since these kinds of microbial pigments are intracellular metabolites. In order to promote the application of microbial pigments in textile dyeing, a novel idea of preparing dye liquid of pyrrole structure pigments based on fermentation broth was put forward via increasing the proportion of extracellular pigments. A model membrane platform was established with a planar lipid bilayer to investigate transmembrane transport of microbial pigments and permeability barrier of cell membrane. The nano-dispersion of pigments was produced as the dye liquor owing to high-throughput transmembrane transfer of intracellular pigments and the increase of extracellular pigments proportion. The results indicated that the size and surface electrical properties of the pigments had contributed much to the mass transfer. It is also showed that transmembrane transmission of the intracellular pigments could be regulated by physical and chemical methods. With the improvement of transmembrane transfer efficiency of microbial pigments and the proportion of extracellular pigments, the complicated biological separation process could be avoided and the application of microbial pigments in textile dyeing can be promoted.
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Affiliation(s)
- Jixian Gong
- School of Textiles Science and Engineering, Tianjin Polytechnic University, Tianjin 300387, China.
- Key Laboratory of Advanced Textile Composites Ministry of Education, Tianjin Polytechnic University, Tianjin 300387, China.
| | - Jiayin Liu
- School of Textiles Science and Engineering, Tianjin Polytechnic University, Tianjin 300387, China.
- Key Laboratory of Advanced Textile Composites Ministry of Education, Tianjin Polytechnic University, Tianjin 300387, China.
| | - Xueqiang Tan
- School of Textiles Science and Engineering, Tianjin Polytechnic University, Tianjin 300387, China.
- Key Laboratory of Advanced Textile Composites Ministry of Education, Tianjin Polytechnic University, Tianjin 300387, China.
| | - Zheng Li
- School of Textiles Science and Engineering, Tianjin Polytechnic University, Tianjin 300387, China.
- Key Laboratory of Advanced Textile Composites Ministry of Education, Tianjin Polytechnic University, Tianjin 300387, China.
| | - Qiujin Li
- School of Textiles Science and Engineering, Tianjin Polytechnic University, Tianjin 300387, China.
- Key Laboratory of Advanced Textile Composites Ministry of Education, Tianjin Polytechnic University, Tianjin 300387, China.
| | - Jianfei Zhang
- School of Textiles Science and Engineering, Tianjin Polytechnic University, Tianjin 300387, China.
- Key Laboratory of Advanced Textile Composites Ministry of Education, Tianjin Polytechnic University, Tianjin 300387, China.
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15
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Mehrdel P, Karimi S, Farré-Lladós J, Casals-Terré J. Novel Variable Radius Spiral⁻Shaped Micromixer: From Numerical Analysis to Experimental Validation. MICROMACHINES 2018; 9:E552. [PMID: 30715051 PMCID: PMC6266334 DOI: 10.3390/mi9110552] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/24/2018] [Revised: 10/19/2018] [Accepted: 10/25/2018] [Indexed: 12/19/2022]
Abstract
A novel type of spiral micromixer with expansion and contraction parts is presented in order to enhance the mixing quality in the low Reynolds number regimes for point-of-care tests (POCT). Three classes of micromixers with different numbers of loops and modified geometries were studied. Numerical simulation was performed to study the flow behavior and mixing performance solving the steady-state Navier⁻Stokes and the convection-diffusion equations in the Reynolds range of 0.1⁻10.0. Comparisons between the mixers with and without expansion parts were made to illustrate the effect of disturbing the streamlines on the mixing performance. Image analysis of the mixing results from fabricated micromixers was used to verify the results of the simulations. Since the proposed mixer provides up to 92% of homogeneity at Re 1.0, generating 442 Pa of pressure drop, this mixer makes a suitable candidate for research in the POCT field.
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Affiliation(s)
- Pouya Mehrdel
- Mechanical Engineering Department-MicroTech Lab., Universitat Politècnica de Catalunya, Colom 7-11 08222 Terrassa, Barcelona, Spain.
| | - Shadi Karimi
- Mechanical Engineering Department-MicroTech Lab., Universitat Politècnica de Catalunya, Colom 7-11 08222 Terrassa, Barcelona, Spain.
| | - Josep Farré-Lladós
- Mechanical Engineering Department-MicroTech Lab., Universitat Politècnica de Catalunya, Colom 7-11 08222 Terrassa, Barcelona, Spain.
| | - Jasmina Casals-Terré
- Mechanical Engineering Department-MicroTech Lab., Universitat Politècnica de Catalunya, Colom 7-11 08222 Terrassa, Barcelona, Spain.
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16
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Smith A, Kaczmar A, Bamford RA, Smith C, Frustaci S, Kovacs-Simon A, O'Neill P, Moore K, Paszkiewicz K, Titball RW, Pagliara S. The Culture Environment Influences Both Gene Regulation and Phenotypic Heterogeneity in Escherichia coli. Front Microbiol 2018; 9:1739. [PMID: 30158905 PMCID: PMC6104134 DOI: 10.3389/fmicb.2018.01739] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2018] [Accepted: 07/11/2018] [Indexed: 11/13/2022] Open
Abstract
Microorganisms shape the composition of the medium they are growing in, which in turn has profound consequences on the reprogramming of the population gene-expression profile. In this paper, we investigate the progressive changes in pH and sugar availability in the medium of a growing Escherichia coli (E. coli) culture. We show how these changes have an effect on both the cellular heterogeneity within the microbial community and the gene-expression profile of the microbial population. We measure the changes in gene-expression as E. coli moves from lag, to exponential, and finally into stationary phase. We found that pathways linked to the changes in the medium composition such as ribosomal, tricarboxylic acid cycle (TCA), transport, and metabolism pathways are strongly regulated during the different growth phases. In order to quantify the corresponding temporal changes in the population heterogeneity, we measure the fraction of E. coli persisters surviving different antibiotic treatments during the various phases of growth. We show that the composition of the medium in which β-lactams or quinolones, but not aminoglycosides, are dissolved strongly affects the measured phenotypic heterogeneity within the culture. Our findings contribute to a better understanding on how the composition of the culture medium influences both the reprogramming in the population gene-expression and the emergence of phenotypic variants.
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Affiliation(s)
- Ashley Smith
- Living Systems Institute, University of Exeter, Exeter, United Kingdom.,Biosciences, University of Exeter, Exeter, United Kingdom
| | - Agnieszka Kaczmar
- Living Systems Institute, University of Exeter, Exeter, United Kingdom.,Biosciences, University of Exeter, Exeter, United Kingdom
| | - Rosemary A Bamford
- Living Systems Institute, University of Exeter, Exeter, United Kingdom.,Biosciences, University of Exeter, Exeter, United Kingdom
| | | | - Simona Frustaci
- Living Systems Institute, University of Exeter, Exeter, United Kingdom
| | | | - Paul O'Neill
- Biosciences, University of Exeter, Exeter, United Kingdom
| | - Karen Moore
- Biosciences, University of Exeter, Exeter, United Kingdom
| | | | | | - Stefano Pagliara
- Living Systems Institute, University of Exeter, Exeter, United Kingdom.,Biosciences, University of Exeter, Exeter, United Kingdom
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17
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Numerical and Experimental Study on Mixing Performances of Simple and Vortex Micro T-Mixers. MICROMACHINES 2018; 9:mi9050204. [PMID: 30424137 PMCID: PMC6187307 DOI: 10.3390/mi9050204] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/30/2018] [Revised: 04/18/2018] [Accepted: 04/25/2018] [Indexed: 01/04/2023]
Abstract
Vortex flow increases the interface area of fluid streams by stretching along with providing continuous stirring action to the fluids in micromixers. In this study, experimental and numerical analyses on a design of micromixer that creates vortex flow were carried out, and the mixing performance was compared with a simple micro T-mixer. In the vortex micro T-mixer, the height of the inlet channels is half of the height of the main mixing channel. The inlet channel connects to the main mixing channel (micromixer) at the one end at an offset position in a fashion that creates vortex flow. In the simple micro T-mixer, the height of the inlet channels is equal to the height of the channel after connection (main mixing channel). Mixing of fluids and flow field have been analyzed for Reynolds numbers in a range from 1–80. The study has been further extended to planar serpentine microchannels, which were combined with a simple and a vortex T-junction, to evaluate and verify their mixing performances. The mixing performance of the vortex T-mixer is higher than the simple T-mixer and significantly increases with the Reynolds number. The design is promising for efficiently increasing mixing simply at the T-junction and can be applied to all micromixers.
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18
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Zuo Y, Zhu X, Shi Y, Liang L, Yang Y. Light Manipulation in Inhomogeneous Liquid Flow and Its Application in Biochemical Sensing. MICROMACHINES 2018; 9:mi9040163. [PMID: 30424097 PMCID: PMC6187708 DOI: 10.3390/mi9040163] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/29/2018] [Revised: 03/23/2018] [Accepted: 03/26/2018] [Indexed: 02/06/2023]
Abstract
Light manipulation has always been the fundamental subject in the field of optics since centuries ago. Traditional optical devices are usually designed using glasses and other materials, such as semiconductors and metals. Optofluidics is the combination of microfluidics and optics, which brings a host of new advantages to conventional solid systems. The capabilities of light manipulation and biochemical sensing are inherent alongside the emergence of optofluidics. This new research area promotes advancements in optics, biology, and chemistry. The development of fast, accurate, low-cost, and small-sized biochemical micro-sensors is an urgent demand for real-time monitoring. However, the fluid flow in the on-chip sensor is usually non-uniformed, which is a new and emerging challenge for the accuracy of optical detection. It is significant to reveal the principle of light propagation in an inhomogeneous liquid flow and the interaction between biochemical samples and light in flowing liquids. In this review, we summarize the current state of optofluidic lab-on-a-chip techniques from the perspective of light modulation by the unique dynamic properties of fluid in heterogeneous media, such as diffusion, heat transfer, and centrifugation etc. Furthermore, this review introduces several novel photonic phenomena in an inhomogeneous liquid flow and demonstrates their application in biochemical sensing.
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Affiliation(s)
- Yunfeng Zuo
- School of Physics and Technology, Wuhan University, Wuhan 430070, China.
| | - Xiaoqiang Zhu
- School of Physics and Technology, Wuhan University, Wuhan 430070, China.
| | - Yang Shi
- School of Physics and Technology, Wuhan University, Wuhan 430070, China.
| | - Li Liang
- School of Physics and Technology, Wuhan University, Wuhan 430070, China.
| | - Yi Yang
- School of Physics and Technology, Wuhan University, Wuhan 430070, China.
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19
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20
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Direct Optofluidic Measurement of the Lipid Permeability of Fluoroquinolones. Sci Rep 2016; 6:32824. [PMID: 27604156 PMCID: PMC5015079 DOI: 10.1038/srep32824] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2016] [Accepted: 08/11/2016] [Indexed: 11/17/2022] Open
Abstract
Quantifying drug permeability across lipid membranes is crucial for drug development. In addition, reduced membrane permeability is a leading cause of antibiotic resistance in bacteria, and hence there is a need for new technologies that can quantify antibiotic transport across biological membranes. We recently developed an optofluidic assay that directly determines the permeability coefficient of autofluorescent drug molecules across lipid membranes. Using ultraviolet fluorescence microscopy, we directly track drug accumulation in giant lipid vesicles as they traverse a microfluidic device while exposed to the drug. Importantly, our measurement does not require the knowledge of the octanol partition coefficient of the drug – we directly determine the permeability coefficient for the specific drug-lipid system. In this work, we report measurements on a range of fluoroquinolone antibiotics and find that their pH dependent lipid permeability can span over two orders of magnitude. We describe various technical improvements for our assay, and provide a new graphical user interface for data analysis to make the technology easier to use for the wider community.
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21
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Passive Mixing Capabilities of Micro- and Nanofibres When Used in Microfluidic Systems. SENSORS 2016; 16:s16081238. [PMID: 27527184 PMCID: PMC5017403 DOI: 10.3390/s16081238] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Revised: 07/26/2016] [Accepted: 07/30/2016] [Indexed: 11/17/2022]
Abstract
Nanofibres are increasingly being used in the field of bioanalytics due to their large surface-area-to-volume ratios and easy-to-functionalize surfaces. To date, nanofibres have been studied as effective filters, concentrators, and immobilization matrices within microfluidic devices. In addition, they are frequently used as optical and electrochemical transduction materials. In this work, we demonstrate that electrospun nanofibre mats cause appreciable passive mixing and therefore provide dual functionality when incorporated within microfluidic systems. Specifically, electrospun nanofibre mats were integrated into Y-shaped poly(methyl methacrylate) microchannels and the degree of mixing was quantified using fluorescence microscopy and ImageJ analysis. The degree of mixing afforded in relationship to fibre diameter, mat height, and mat length was studied. We observed that the most mixing was caused by small diameter PVA nanofibres (450–550 nm in diameter), producing up to 71% mixing at the microchannel outlet, compared to up to 51% with polystyrene microfibres (0.8–2.7 μm in diameter) and 29% mixing in control channels containing no fibres. The mixing afforded by the PVA nanofibres is caused by significant inhomogeneity in pore size and distribution leading to percolation. As expected, within all the studies, fluid mixing increased with fibre mat height, which corresponds to the vertical space of the microchannel occupied by the fibre mats. Doubling the height of the fibre mat led to an average increase in mixing of 14% for the PVA nanofibres and 8% for the PS microfibres. Overall, mixing was independent of the length of the fibre mat used (3–10 mm), suggesting that most mixing occurs as fluid enters and exits the fibre mat. The mixing effects observed within the fibre mats were comparable to or better than many passive mixers reported in literature. Since the nanofibre mats can be further functionalized to couple analyte concentration, immobilization, and detection with enhanced fluid mixing, they are a promising nanomaterial providing dual-functionality within lab-on-a-chip devices.
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22
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Purushothaman S, Cama J, Keyser UF. Dependence of norfloxacin diffusion across bilayers on lipid composition. SOFT MATTER 2016; 12:2135-2144. [PMID: 26768751 DOI: 10.1039/c5sm02371h] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Antibiotic resistance is a growing concern in medicine and raises the need to develop and design new drug molecules that can efficiently inhibit bacterial replication. Spurring the passive uptake of the drug molecules is an obvious solution. However our limited understanding of drug-membrane interactions due to the presence of an overwhelming variety of lipids constituting cellular membranes and the lack of facile tools to probe the bio-physical interactions between drugs and lipids imposes a major challenge towards developing new drug molecules that can enter the cell via passive diffusion. Here, we used a label-free micro-fluidic platform combined with giant unilamellar lipid vesicles to investigate the permeability of membranes containing mixtures of DOPE and DOPG in DOPC, leading to a label-free measurement of passive membrane-permeability of autofluorescent antibiotics. A fluoroquinolone drug, norfloxacin was used as a case study. Our results indicate that the diffusion of norfloxacin is strongly dependent on the lipid composition which is not expected from the traditional octanol-lipid partition co-efficient assay. The anionic lipid, DOPG, slows the diffusion process whereas the diffusion across liposomes containing DOPE increases with higher DOPE concentration. Our findings emphasise the need to investigate drug-membrane interactions with focus on the specificity of drugs to lipids for efficient drug delivery, drug encapsulation and targeted drug-delivery.
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Affiliation(s)
- Sowmya Purushothaman
- Biological and Soft Systems, Department of Physics, University of Cambridge, Cavendish Laboratory, JJ Thomson Avenue, Cambridge, CB3 0HE, UK.
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23
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Deshpande S, Caspi Y, Meijering AEC, Dekker C. Octanol-assisted liposome assembly on chip. Nat Commun 2016; 7:10447. [PMID: 26794442 PMCID: PMC4735860 DOI: 10.1038/ncomms10447] [Citation(s) in RCA: 202] [Impact Index Per Article: 25.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2015] [Accepted: 12/14/2015] [Indexed: 12/22/2022] Open
Abstract
Liposomes are versatile supramolecular assemblies widely used in basic and applied sciences. Here we present a novel microfluidics-based method, octanol-assisted liposome assembly (OLA), to form monodisperse, cell-sized (5-20 μm), unilamellar liposomes with excellent encapsulation efficiency. Akin to bubble blowing, an inner aqueous phase and a surrounding lipid-carrying 1-octanol phase is pinched off by outer fluid streams. Such hydrodynamic flow focusing results in double-emulsion droplets that spontaneously develop a side-connected 1-octanol pocket. Owing to interfacial energy minimization, the pocket splits off to yield fully assembled solvent-free liposomes within minutes. This solves the long-standing fundamental problem of prolonged presence of residual oil in the liposome bilayer. We demonstrate the unilamellarity of liposomes with functional α-haemolysin protein pores in the membrane and validate the biocompatibility by inner leaflet localization of bacterial divisome proteins (FtsZ and ZipA). OLA offers a versatile platform for future analytical tools, delivery systems, nanoreactors and synthetic cells.
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Affiliation(s)
- Siddharth Deshpande
- Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Lorentzweg 1, 2628 CJ Delft, The Netherlands
| | - Yaron Caspi
- Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Lorentzweg 1, 2628 CJ Delft, The Netherlands
| | - Anna E C Meijering
- Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Lorentzweg 1, 2628 CJ Delft, The Netherlands
| | - Cees Dekker
- Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Lorentzweg 1, 2628 CJ Delft, The Netherlands
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24
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Cama J, Bajaj H, Pagliara S, Maier T, Braun Y, Winterhalter M, Keyser UF. Quantification of Fluoroquinolone Uptake through the Outer Membrane Channel OmpF of Escherichia coli. J Am Chem Soc 2015; 137:13836-43. [DOI: 10.1021/jacs.5b08960] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jehangir Cama
- Biological
and Soft Systems, Cavendish Laboratory, Department of Physics, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Harsha Bajaj
- Jacobs University Bremen, Campus
Ring 1, D-28759, Bremen, Germany
| | - Stefano Pagliara
- Biological
and Soft Systems, Cavendish Laboratory, Department of Physics, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
- Department
of Biosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, Devon EX4, United Kingdom
| | - Theresa Maier
- Biological
and Soft Systems, Cavendish Laboratory, Department of Physics, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
| | - Yvonne Braun
- Jacobs University Bremen, Campus
Ring 1, D-28759, Bremen, Germany
| | | | - Ulrich F. Keyser
- Biological
and Soft Systems, Cavendish Laboratory, Department of Physics, University of Cambridge, JJ Thomson Avenue, Cambridge CB3 0HE, United Kingdom
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