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Rose JB, Gascón JA, Sutter M, Sheppard DI, Kerfeld CA, Beck WF. Photoactivation of the orange carotenoid protein requires two light-driven reactions mediated by a metastable monomeric intermediate. Phys Chem Chem Phys 2023; 25:33000-33012. [PMID: 38032096 DOI: 10.1039/d3cp04484j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2023]
Abstract
The orange carotenoid protein (OCP) functions as a sensor of the ambient light intensity and as a quencher of bilin excitons when it binds to the core of the cyanobacterial phycobilisome. We show herein that the photoactivation mechanism that converts the resting, orange-colored state, OCPO, to the active red-colored state, OCPR, requires a sequence of two reactions, each requiring absorption of a single photon by an intrinsic ketocarotenoid chromophore. Global analysis of absorption spectra recorded during continuous illumination of OCPO preparations from Synechocystis sp. PCC 6803 detects the reversible formation of a metastable intermediate, OCPI, in which the ketocarotenoid canthaxanthin exhibits an absorption spectrum with a partial red shift and a broadened vibronic structure compared to that of the OCPO state. While the dark recovery from OCPR to OCPI is a first-order, unimolecular reaction, the subsequent conversion of OCPI to the resting OCPO state is bimolecular, involving association of two OCPO monomers to form the dark-stable OCPO dimer aggregate. These results indicate that photodissociation of the OCPO dimer to form the monomeric OCPO intermediate is the first step in the photoactivation mechanism. Formation of the OCPO monomer from the dimer increases the mean value and broadens the distribution of the solvent-accessible surface area of the canthaxanthin chromophore measured in molecular dynamics trajectories at 300 K. The second step in the photoactivation mechanism is initiated by absorption of a second photon, by canthaxanthin in the OCPO monomer, which obtains the fully red-shifted and broadened absorption spectrum detected in the OCPR product state owing to displacement of the C-terminal domain and the translocation of canthaxanthin more than 12 Å into the N-terminal domain. Both steps in the photoactivation reaction of OCP are likely to involve changes in the structure of the C-terminal domain elicited by excited-state conformational motions of the ketocarotenoid.
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Affiliation(s)
- Justin B Rose
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824-1322, USA.
| | - José A Gascón
- Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269-3060, USA
| | - Markus Sutter
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824-1322, USA
- Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - Damien I Sheppard
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824-1322, USA
| | - Cheryl A Kerfeld
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824-1322, USA
- Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - Warren F Beck
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824-1322, USA.
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2
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Schwinger DP, Peschel MT, Rigotti T, Kabaciński P, Knoll T, Thyrhaug E, Cerullo G, Hauer J, de Vivie-Riedle R, Bach T. Photoinduced B-Cl Bond Fission in Aldehyde-BCl 3 Complexes as a Mechanistic Scenario for C-H Bond Activation. J Am Chem Soc 2022; 144:18927-18937. [PMID: 36205547 DOI: 10.1021/jacs.2c06683] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
In concert with carbonyl compounds, Lewis acids have been identified as a versatile class of photocatalysts. Thus far, research has focused on activation of the substrate, either by changing its photophysical properties or by modifying its photochemistry. In this work, we expand the established mode of action by demonstrating that UV photoexcitation of a Lewis acid-base complex can lead to homolytic cleavage of a covalent bond in the Lewis acid. In a study on the complex of benzaldehyde and the Lewis acid BCl3, we found evidence for homolytic B-Cl bond cleavage leading to formation of a borylated ketyl radical and a free chlorine atom only hundreds of femtoseconds after excitation. Both time-dependent density functional theory and transient absorption experiments identify a benzaldehyde-BCl2 cation as the dominant species formed on the nanosecond time scale. The experimentally validated B-Cl bond homolysis was synthetically exploited for a BCl3-mediated hydroalkylation reaction of aromatic aldehydes (19 examples, 42-76% yield). It was found that hydrocarbons undergo addition to the C═O double bond via a radical pathway. The photogenerated chlorine radical abstracts a hydrogen atom from the alkane, and the resulting carbon-centered radical either recombines with the borylated ketyl radical or adds to the ground-state aldehyde-BCl3 complex, releasing a chlorine atom. The existence of a radical chain was corroborated by quantum yield measurements and by theory. The photolytic mechanism described here is based on electron transfer between a bound chlorine and an aromatic π-system on the substrate. Thereby, it avoids the use of redox-active transition metals.
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Affiliation(s)
- Daniel P Schwinger
- Department Chemie and Catalysis Research Center (CRC) School of Natural Sciences, Technische Universität München, D-85747 Garching, Germany
| | - Martin T Peschel
- Department of Chemistry, Ludwig-Maximilians-Universität München, D-81377 München, Germany
| | - Thomas Rigotti
- Department Chemie and Catalysis Research Center (CRC) School of Natural Sciences, Technische Universität München, D-85747 Garching, Germany
| | - Piotr Kabaciński
- IFN-CNR and Dipartimento di Fisica, Politecnico di Milano, I-20133 Milano, Italy
| | - Thomas Knoll
- Department of Chemistry, Ludwig-Maximilians-Universität München, D-81377 München, Germany
| | - Erling Thyrhaug
- Department Chemie and Catalysis Research Center (CRC) School of Natural Sciences, Technische Universität München, D-85747 Garching, Germany
| | - Giulio Cerullo
- IFN-CNR and Dipartimento di Fisica, Politecnico di Milano, I-20133 Milano, Italy
| | - Jürgen Hauer
- Department Chemie and Catalysis Research Center (CRC) School of Natural Sciences, Technische Universität München, D-85747 Garching, Germany
| | - Regina de Vivie-Riedle
- Department of Chemistry, Ludwig-Maximilians-Universität München, D-81377 München, Germany
| | - Thorsten Bach
- Department Chemie and Catalysis Research Center (CRC) School of Natural Sciences, Technische Universität München, D-85747 Garching, Germany
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3
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Šebelík V, Duffy CDP, Keil E, Polívka T, Hauer J. Understanding Carotenoid Dynamics via the Vibronic Energy Relaxation Approach. J Phys Chem B 2022; 126:3985-3994. [PMID: 35609122 DOI: 10.1021/acs.jpcb.2c00996] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Carotenoids are an integral part of natural photosynthetic complexes, with tasks ranging from light harvesting to photoprotection. Their underlying energy deactivation network of optically dark and bright excited states is extremely efficient: after excitation of light with up to 2.5 eV of photon energy, the system relaxes back to ground state on a time scale of a few picoseconds. In this article, we summarize how a model based on the vibrational energy relaxation approach (VERA) explains the main characteristics of relaxation dynamics after one-photon excitation with special emphasis on the so-called S* state. Lineshapes after two-photon excitation are beyond the current model of VERA. We outline this future line of research in our article. In terms of experimental method development, we discuss which techniques are needed to better describe energy dissipation effects in carotenoids and within the first solvation shell.
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Affiliation(s)
- Václav Šebelík
- Dynamical Spectroscopy, Department of Chemistry, Technical University of Munich, Lichtenbergstraße 4, 85748 Garching bei Munich, Germany
| | - Christopher D P Duffy
- Digital Environment Research Institute, Queen Mary University of London, London E1 4NS, U.K
| | - Erika Keil
- Dynamical Spectroscopy, Department of Chemistry, Technical University of Munich, Lichtenbergstraße 4, 85748 Garching bei Munich, Germany
| | - Tomáš Polívka
- Department of Physics, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05 České Budějovice, Czech Republic.,Biology Centre, Institute of Plant Molecular Biology, Czech Academy of Sciences, Branišovská 1160/31, 370 05 České Budějovice, Czech Republic
| | - Jürgen Hauer
- Dynamical Spectroscopy, Department of Chemistry, Technical University of Munich, Lichtenbergstraße 4, 85748 Garching bei Munich, Germany
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4
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The Energy Transfer Yield between Carotenoids and Chlorophylls in Peridinin Chlorophyll a Protein Is Robust against Mutations. Int J Mol Sci 2022; 23:ijms23095067. [PMID: 35563456 PMCID: PMC9099807 DOI: 10.3390/ijms23095067] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Revised: 04/29/2022] [Accepted: 04/29/2022] [Indexed: 12/12/2022] Open
Abstract
The energy transfer (ET) from carotenoids (Cars) to chlorophylls (Chls) in photosynthetic complexes occurs with almost unitary efficiency thanks to the synergistic action of multiple finely tuned channels whose photophysics and dynamics are not fully elucidated yet. We investigated the energy flow from the Car peridinin (Per) to Chl a in the peridinin chlorophyll a protein (PCP) from marine algae Amphidinium carterae by using two-dimensional electronic spectroscopy (2DES) with a 10 fs temporal resolution. Recently debated hypotheses regarding the S2-to-S1 relaxation of the Car via a conical intersection and the involvement of possible intermediate states in the ET were examined. The comparison with an N89L mutant carrying the Per donor in a lower-polarity environment helped us unveil relevant details on the mechanisms through which excitation was transferred: the ET yield was conserved even when a mutation perturbed the optimization of the system thanks to the coexistence of multiple channels exploited during the process.
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5
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Jakučionis M, Gaižiu Nas I, Šulskus J, Abramavičius D. Simulation of Ab Initio Optical Absorption Spectrum of β-Carotene with Fully Resolved S0 and S2 Vibrational Normal Modes. J Phys Chem A 2022; 126:180-189. [PMID: 34985272 DOI: 10.1021/acs.jpca.1c06115] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The electronic absorption spectrum of β-carotene (β-Car) is studied using quantum chemistry and quantum dynamics simulations. Vibrational normal modes were computed in optimized geometries of the electronic ground state S0 and the optically bright excited S2 state using the time-dependent density functional theory. By expressing the S2-state normal modes in terms of the ground-state modes, we find that no one-to-one correspondence between the ground- and excited-state vibrational modes exists. Using the ab initio results, we simulated the β-Car absorption spectrum with all 282 vibrational modes in a model solvent at 300 K using the time-dependent Dirac-Frenkel variational principle and are able to qualitatively reproduce the full absorption line shape. By comparing the 282-mode model with the prominent 2-mode model, widely used to interpret carotenoid experiments, we find that the full 282-mode model better describes the high-frequency progression of carotenoid absorption spectra; hence, vibrational modes become highly mixed during the S0 → S2 optical excitation. The obtained results suggest that electronic energy dissipation is mediated by numerous vibrational modes.
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Affiliation(s)
- Mantas Jakučionis
- Institute of Chemical Physics, Vilnius University, Sauletekio Avenue 9-III, LT-10222 Vilnius, Lithuania
| | - Ignas Gaižiu Nas
- Institute of Chemical Physics, Vilnius University, Sauletekio Avenue 9-III, LT-10222 Vilnius, Lithuania
| | - Juozas Šulskus
- Institute of Chemical Physics, Vilnius University, Sauletekio Avenue 9-III, LT-10222 Vilnius, Lithuania
| | - Darius Abramavičius
- Institute of Chemical Physics, Vilnius University, Sauletekio Avenue 9-III, LT-10222 Vilnius, Lithuania
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6
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Keil E, Malevich P, Hauer J. Achromatic frequency doubling of supercontinuum pulses for transient absorption spectroscopy. OPTICS EXPRESS 2021; 29:39042-39054. [PMID: 34809275 DOI: 10.1364/oe.442400] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Accepted: 10/25/2021] [Indexed: 06/13/2023]
Abstract
We present achromatic frequency doubling of supercontinuum pulses from a hollow core fiber as a technique for obtaining tunable ultrashort pulses in the near UV and blue spectral range. Pulse energies are stable on a 1.1% level, averaged over 100 000 shots. By the use of conventional optics only, we compress a 0.2 µJ pulse at a center wavelength of 475 nm to a pulse duration of 12 fs, as measured by X-FROG. We test the capabilities of the approach by employing the ASHG-pulses as a pump in a transient absorption experiment on β-carotene in solution.
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7
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UV Excitation of Carotenoid Binding Proteins OCP and HCP: Excited‐State Dynamics and Product Formation. CHEMPHOTOCHEM 2021. [DOI: 10.1002/cptc.202100194] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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8
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Mohan T M N, Leslie CH, Sil S, Rose JB, Tilluck RW, Beck WF. Broadband 2DES detection of vibrational coherence in the S x state of canthaxanthin. J Chem Phys 2021; 155:035103. [PMID: 34293883 DOI: 10.1063/5.0055598] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The nonadiabatic mechanism that mediates nonradiative decay of the bright S2 state to the dark S1 state of carotenoids involves population of a bridging intermediate state, Sx, in several examples. The nature of Sx remains to be determined definitively, but it has been recently suggested that Sx corresponds to conformationally distorted molecules evolving along out-of-plane coordinates of the isoprenoid backbone near a low barrier between planar and distorted conformations on the S2 potential surface. In this study, the electronic and vibrational dynamics accompanying the formation of Sx in toluene solutions of the ketocarotenoid canthaxanthin (CAN) are characterized with broadband two-dimensional electronic spectroscopy (2DES) with 7.8 fs excitation pulses and detection of the linear polarization components of the third-order nonlinear optical signal. A stimulated-emission cross peak in the 2DES spectrum accompanies the formation of Sx in <20 fs following excitation of the main absorption band. Sx is prepared instantaneously, however, with excitation of hot-band transitions associated with distorted conformations of CAN's isoprenoid backbone in the low frequency onset of the main absorption band. Vibrational coherence oscillation maps and modulated anisotropy transients show that Sx undergoes displacements from the Franck-Condon S2 state along out-of-plane coordinates as it passes to the S1 state. The results are consistent with the conclusion that CAN's carbonyl-substituted β-ionone rings impart an intramolecular charge-transfer character that frictionally slows the passage from Sx to S1 compared to carotenoids lacking carbonyl substitution. Despite the longer lifetime, the S1 state of CAN is formed with retention of vibrational coherence after passing through a conical intersection seam with the Sx state.
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Affiliation(s)
- Nila Mohan T M
- Department of Chemistry, Michigan State University, 578 S. Shaw Lane, East Lansing, Michigan 48824, USA
| | - Chase H Leslie
- Department of Chemistry, Michigan State University, 578 S. Shaw Lane, East Lansing, Michigan 48824, USA
| | - Sourav Sil
- Department of Chemistry, Michigan State University, 578 S. Shaw Lane, East Lansing, Michigan 48824, USA
| | - Justin B Rose
- Department of Chemistry, Michigan State University, 578 S. Shaw Lane, East Lansing, Michigan 48824, USA
| | - Ryan W Tilluck
- Department of Chemistry, Michigan State University, 578 S. Shaw Lane, East Lansing, Michigan 48824, USA
| | - Warren F Beck
- Department of Chemistry, Michigan State University, 578 S. Shaw Lane, East Lansing, Michigan 48824, USA
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9
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Chen ZH, Wang Y, Xu RX, Yan Y. Correlated vibration-solvent effects on the non-Condon exciton spectroscopy. J Chem Phys 2021; 154:244105. [PMID: 34241336 DOI: 10.1063/5.0053169] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Excitation energy transfer is crucially involved in a variety of systems. During the process, the non-Condon vibronic coupling and the surrounding solvent interaction may synergetically play important roles. In this work, we study the correlated vibration-solvent influences on the non-Condon exciton spectroscopy. Statistical analysis is elaborated for the overall vibration-plus-solvent environmental effects. Analytic solutions are derived for the linear absorption of monomer systems. General simulations are accurately carried out via the dissipaton-equation-of-motion approach. The resulted spectra in either the linear absorption or strong field regime clearly demonstrate the coherence enhancement due to the synergetic vibration-solvent correlation.
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Affiliation(s)
- Zi-Hao Chen
- Department of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Yao Wang
- Hefei National Laboratory for Physical Sciences at the Microscale and iChEM and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Rui-Xue Xu
- Department of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - YiJing Yan
- Department of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
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10
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Mondal S, Mondal S, Seki K, Bagchi B. An exact solution in the theory of fluorescence resonance energy transfer with vibrational relaxation. J Chem Phys 2021; 154:134104. [PMID: 33832249 DOI: 10.1063/5.0045008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The elegant expression of Förster that predicts the well-known 1/R6 distance (R) dependence of the rate of energy transfer, although widely used, was derived using several approximations. Notable among them is the neglect of the vibrational relaxation in the reactant (donor) and product (acceptor) manifolds. Vibrational relaxation can play an important role when the energy transfer rate is faster than the vibrational relaxation rate. Under such conditions, donor to acceptor energy transfer can occur from the excited vibrational states. This phenomenon is not captured by the usual formulation based on the overlap of donor emission and acceptor absorption spectra. Here, we develop a Green's function-based generalized formalism and obtain an exact solution for the excited state population relaxation and the rate of energy transfer in the presence of vibrational relaxation. We find that the application of the well-known Förster's expression might lead to overestimation of R.
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Affiliation(s)
- Sangita Mondal
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bengaluru, India
| | - Sayantan Mondal
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bengaluru, India
| | - Kazuhiko Seki
- National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Japan
| | - Biman Bagchi
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bengaluru, India
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11
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Khan T, Litvín R, Šebelík V, Polívka T. Excited-State Evolution of Keto-Carotenoids after Excess Energy Excitation in the UV Region. Chemphyschem 2021; 22:471-480. [PMID: 33373476 DOI: 10.1002/cphc.202000982] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Revised: 12/23/2020] [Indexed: 11/10/2022]
Abstract
Carotenoids are molecules with rich photophysics that are in many biological systems involved in photoprotection. Yet, their response to excess energy excitation is only scarcely studied. Here we have explored excited state properties of three keto-carotenoids, echinenone, canthaxanthin and rhodoxanthin after excess energy excitation to a singlet state absorbing in UV. Though the basic spectral features and kinetics of S2 , hot S1 , relaxed S1 states remain unchanged upon UV excitation, the clear increase of the S* signal is observed after excess energy excitation, associated with increased S* lifetime. A multiple origin of the S* signal, originating either from specific conformations in the S1 state or from a non-equilibrated ground state, is confirmed in this work. We propose that the increased amount of energy stored in molecular vibrations, induced by the UV excitation, is the reason for the enhanced S* signal observed after UV excitation. Our data also suggest that a fraction of the UV excited state population may proceed through a non-sequential pathway, bypassing the S2 state.
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Affiliation(s)
- Tuhin Khan
- Institute of Physics, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
| | - Radek Litvín
- Institute of Chemistry, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic.,Biology Centre, Czech Academy of Sciences, Branišovská 31, 370 05, České Budějovice, Czech Republic
| | - Václav Šebelík
- Institute of Physics, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
| | - Tomáš Polívka
- Institute of Physics, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
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12
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Optical Projection and Spatial Separation of Spin-Entangled Triplet Pairs from the S1 (21 Ag–) State of Pi-Conjugated Systems. Chem 2020. [DOI: 10.1016/j.chempr.2020.09.011] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
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13
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Balevičius V, Duffy CDP. Excitation quenching in chlorophyll-carotenoid antenna systems: 'coherent' or 'incoherent'. PHOTOSYNTHESIS RESEARCH 2020; 144:301-315. [PMID: 32266612 PMCID: PMC7239839 DOI: 10.1007/s11120-020-00737-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Accepted: 03/18/2020] [Indexed: 05/20/2023]
Abstract
Plants possess an essential ability to rapidly down-regulate light-harvesting in response to high light. This photoprotective process involves the formation of energy-quenching interactions between the chlorophyll and carotenoid pigments within the antenna of Photosystem II (PSII). The nature of these interactions is currently debated, with, among others, 'incoherent' or 'coherent' quenching models (or a combination of the two) suggested by a range of time-resolved spectroscopic measurements. In 'incoherent quenching', energy is transferred from a chlorophyll to a carotenoid and is dissipated due to the intrinsically short excitation lifetime of the latter. 'Coherent quenching' would arise from the quantum mechanical mixing of chlorophyll and carotenoid excited state properties, leading to a reduction in chlorophyll excitation lifetime. The key parameters are the energy gap, [Formula: see text] and the resonance coupling, J, between the two excited states. Coherent quenching will be the dominant process when [Formula: see text] i.e., when the two molecules are resonant, while the quenching will be largely incoherent when [Formula: see text] One would expect quenching to be energetically unfavorable for [Formula: see text] The actual dynamics of quenching lie somewhere between these limiting regimes and have non-trivial dependencies of both J and [Formula: see text] Using the Hierarchical Equation of Motion (HEOM) formalism we present a detailed theoretical examination of these excitation dynamics and their dependence on slow variations in J and [Formula: see text] We first consider an isolated chlorophyll-carotenoid dimer before embedding it within a PSII antenna sub-unit (LHCII). We show that neither energy transfer, nor the mixing of excited state lifetimes represent unique or necessary pathways for quenching and in fact discussing them as distinct quenching mechanisms is misleading. However, we do show that quenching cannot be switched 'on' and 'off' by fine tuning of [Formula: see text] around the resonance point, [Formula: see text] Due to the large reorganization energy of the carotenoid excited state, we find that the presence (or absence) of coherent interactions have almost no impact of the dynamics of quenching. Counter-intuitively significant quenching is present even when the carotenoid excited state lies above that of the chlorophyll. We also show that, above a rather small threshold value of [Formula: see text]quenching becomes less and less sensitive to J (since in the window [Formula: see text] the overall lifetime is independent of it). The requirement for quenching appear to be only that [Formula: see text] Although the coherent/incoherent character of the quenching can vary, the overall kinetics are likely robust with respect to fluctuations in J and [Formula: see text] This may be the basis for previous observations of NPQ with both coherent and incoherent features.
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Affiliation(s)
- Vytautas Balevičius
- School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London, E1 4NS, UK
| | - Christopher D P Duffy
- School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London, E1 4NS, UK.
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14
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Šebelík V, Kloz M, Rebarz M, Přeček M, Kang EH, Choi TL, Christensen RL, Polívka T. Spectroscopy and excited state dynamics of nearly infinite polyenes. Phys Chem Chem Phys 2020; 22:17867-17879. [PMID: 32766621 DOI: 10.1039/d0cp02465a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Steady-state and transient absorption spectra with <50 fs time resolution were obtained for two conjugated polymers, both with ≈200 conjugated double bonds (N), constrained in planar, stable, polyene frameworks. Solutions of the polymers exhibit the same S2 → S1 → S* → S0 decay pathway observed for the N = 11-19 polyene oligomers and for zeaxanthin homologues with N = 11-23. Comparisons with the excited state dynamics of polydiactylene and a much longer, more disordered polyene polymer (poly(DEDPM)) show that the S2, S1, and S* lifetimes of the four polymers are almost identical. The S* signals in the polymers are assigned to absorption from vibrationally excited ground states. In spite of significant heterogeneities and variations in conjugation lengths in these long polyenes, their S0 → S2 absorptions are vibronically-resolved in room temperature solutions with electronic origins at ≈600 nm. The limiting wavelength for the S0 → S2 transitions is consistent with the persistence of bond length alternation in the electronic ground states and a HOMO-LUMO band gap in polyenes with N ≈ 200. The coincidence of the well-resolved S0 → S2 electronic origins and the convergence of the excited state lifetimes in the four polymers point to a common, "nearly infinite" polyene limit.
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Affiliation(s)
- Václav Šebelík
- Institute of Physics, Faculty of Science, University of South Bohemia, České Budjovice, Czech Republic.
| | - Miroslav Kloz
- ELI Beamlines, Institute of Physics, Czech Academy of Sciences, Za Radnicí 835, 252 41 Dolní BřeŽany, Czech Republic
| | - Mateusz Rebarz
- ELI Beamlines, Institute of Physics, Czech Academy of Sciences, Za Radnicí 835, 252 41 Dolní BřeŽany, Czech Republic
| | - Martin Přeček
- ELI Beamlines, Institute of Physics, Czech Academy of Sciences, Za Radnicí 835, 252 41 Dolní BřeŽany, Czech Republic
| | - Eun-Hye Kang
- Department of Chemistry, Seoul National University, Seoul 08826, Korea
| | - Tae-Lim Choi
- Department of Chemistry, Seoul National University, Seoul 08826, Korea
| | | | - Tomáš Polívka
- Institute of Physics, Faculty of Science, University of South Bohemia, České Budjovice, Czech Republic.
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15
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Wei T, Balevičius V, Polívka T, Ruban AV, Duffy CDP. How carotenoid distortions may determine optical properties: lessons from the Orange Carotenoid Protein. Phys Chem Chem Phys 2019; 21:23187-23197. [PMID: 31612872 DOI: 10.1039/c9cp03574e] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Carotenoids in photosynthetic proteins carry out the dual function of harvesting light and defending against photo-damage by quenching excess energy. The latter involves the low-lying, dark, excited state labelled S1. Here "dark" means optically-forbidden, a property that is often attributed to molecular symmetry, which leads to speculation that its optical properties may be strongly-perturbed by structural distortions. This has been both explicitly and implicitly proposed as an important feature of photo-protective energy quenching. Here we present a theoretical analysis of the relationship between structural distortions and S1 optical properties. We outline how S1 is dark not because of overall geometric symmetry but because of a topological symmetry related to bond length alternation in the conjugated backbone. Taking the carotenoid echinenone as an example and using a combination of molecular dynamics, quantum chemistry, and the theory of spectral lineshapes, we show that distortions that break this symmetry are extremely stiff. They are therefore absent in solution and only marginally present in even a very highly-distorted protein binding pocket such as in the Orange Carotenoid Protein (OCP). S1 remains resolutely optically-forbidden despite any breaking of bulk molecular symmetry by the protein environment. However, rotations of partially conjugated end-rings can result in fine tuning of the S1 transition density which may exert some influence on interactions with neighbouring chromophores.
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Affiliation(s)
- Tiejun Wei
- School of Biological and Chemical Sciences, Queen Mary University of London, London E1 4NS, UK.
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16
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17
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Balevičius V, Wei T, Di Tommaso D, Abramavicius D, Hauer J, Polívka T, Duffy CDP. The full dynamics of energy relaxation in large organic molecules: from photo-excitation to solvent heating. Chem Sci 2019; 10:4792-4804. [PMID: 31183032 PMCID: PMC6521204 DOI: 10.1039/c9sc00410f] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2019] [Accepted: 03/29/2019] [Indexed: 01/04/2023] Open
Abstract
In some molecular systems, such as nucleobases, polyenes or sunscreens, substantial amounts of photo-excitation energy are dissipated on a sub-picosecond time scale. Where does this energy go or among which degrees of freedom it is being distributed at such early times?
In some molecular systems, such as nucleobases, polyenes or the active ingredients of sunscreens, substantial amounts of photo-excitation energy are dissipated on a sub-picosecond time scale, raising questions such as: where does this energy go or among which degrees of freedom it is being distributed at such early times? Here we use transient absorption spectroscopy to track excitation energy dispersing from the optically accessible vibronic subsystem into the remaining vibrational subsystem of the solute and solvent. Monitoring the flow of energy during vibrational redistribution enables quantification of local molecular heating. Subsequent heat dissipation away from the solute molecule is characterized by classical thermodynamics and molecular dynamics simulations. Hence, we present a holistic approach that tracks the internal temperature and vibronic distribution from the act of photo-excitation to the restoration of the global equilibrium. Within this framework internal vibrational redistribution and vibrational cooling are emergent phenomena. We demonstrate the validity of the framework by examining a highly controversial example, carotenoids. We show that correctly accounting for the local temperature unambiguously explains their energetically and temporally congested spectral dynamics without the ad hoc postulation of additional ‘dark’ states. An immediate further application of this approach would be to monitor the excitation and thermal dynamics of pigment–protein systems.
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Affiliation(s)
- Vytautas Balevičius
- School of Chemical and Biological Sciences , Queen Mary University of London , Mile End Road , London E1 4NS , UK .
| | - Tiejun Wei
- School of Chemical and Biological Sciences , Queen Mary University of London , Mile End Road , London E1 4NS , UK .
| | - Devis Di Tommaso
- School of Chemical and Biological Sciences , Queen Mary University of London , Mile End Road , London E1 4NS , UK .
| | - Darius Abramavicius
- Institute of Chemical Physics , Vilnius University , Sauletekio av. 9 , Vilnius , LT-10222 , Lithuania
| | - Jürgen Hauer
- Fakultät für Chemie , Technical University of Munich , Lichtenbergstraße 4 , D-85748 Garching , Germany.,Photonics Institute , TU Wien , Gußhausstraße 27 , 1040 Vienna , Austria
| | - Tomas Polívka
- Institute of Physics and Biophysics , Faculty of Science , University of South Bohemia , Branišovská 1760 , 37005 České Budějovice , Czech Republic
| | - Christopher D P Duffy
- School of Chemical and Biological Sciences , Queen Mary University of London , Mile End Road , London E1 4NS , UK .
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18
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Excited-state dynamics of 3,3′-dihydroxyisorenieratene and (3R,3′R)-zeaxanthin: Observation of vibrationally hot S0 species. Arch Biochem Biophys 2018; 646:137-144. [DOI: 10.1016/j.abb.2018.03.035] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2018] [Revised: 03/13/2018] [Accepted: 03/26/2018] [Indexed: 11/19/2022]
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19
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Affiliation(s)
- Hou-Dao Zhang
- Department of Chemical Physics and Hefei National Laboratory for Physical Sciences at the Microscale, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Rui-Xue Xu
- Department of Chemical Physics and Hefei National Laboratory for Physical Sciences at the Microscale, University of Science and Technology of China, Hefei, Anhui 230026, China
- Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Xiao Zheng
- Department of Chemical Physics and Hefei National Laboratory for Physical Sciences at the Microscale, University of Science and Technology of China, Hefei, Anhui 230026, China
- Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - YiJing Yan
- Department of Chemical Physics and Hefei National Laboratory for Physical Sciences at the Microscale, University of Science and Technology of China, Hefei, Anhui 230026, China
- iChEM (Collaborative Innovation Center of Chemistry for Energy Materials), University of Science and Technology of China, Hefei, Anhui 230026, China
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Thyrhaug E, Lincoln CN, Branchi F, Cerullo G, Perlík V, Šanda F, Lokstein H, Hauer J. Carotenoid-to-bacteriochlorophyll energy transfer through vibronic coupling in LH2 from Phaeosprillum molischianum. PHOTOSYNTHESIS RESEARCH 2018; 135:45-54. [PMID: 28523607 PMCID: PMC5783993 DOI: 10.1007/s11120-017-0398-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2017] [Accepted: 05/09/2017] [Indexed: 06/07/2023]
Abstract
The peripheral light-harvesting antenna complex (LH2) of purple photosynthetic bacteria is an ideal testing ground for models of structure-function relationships due to its well-determined molecular structure and ultrafast energy deactivation. It has been the target for numerous studies in both theory and ultrafast spectroscopy; nevertheless, certain aspects of the convoluted relaxation network of LH2 lack a satisfactory explanation by conventional theories. For example, the initial carotenoid-to-bacteriochlorophyll energy transfer step necessary on visible light excitation was long considered to follow the Förster mechanism, even though transfer times as short as 40 femtoseconds (fs) have been observed. Such transfer times are hard to accommodate by Förster theory, as the moderate coupling strengths found in LH2 suggest much slower transfer within this framework. In this study, we investigate LH2 from Phaeospirillum (Ph.) molischianum in two types of transient absorption experiments-with narrowband pump and white-light probe resulting in 100 fs time resolution, and with degenerate broadband 10 fs pump and probe pulses. With regard to the split Qx band in this system, we show that vibronically mediated transfer explains both the ultrafast carotenoid-to-B850 transfer, and the almost complete lack of transfer to B800. These results are beyond Förster theory, which predicts an almost equal partition between the two channels.
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Affiliation(s)
- Erling Thyrhaug
- Photonics Institute, TU Wien, Gußhausstraße 27, 1040, Vienna, Austria
| | - Craig N Lincoln
- Photonics Institute, TU Wien, Gußhausstraße 27, 1040, Vienna, Austria
| | - Federico Branchi
- Dipartimento di Fisica, IFN-CNR, Politecnico di Milano, Piazza L. da Vinci, 32, 20133, Milan, Italy
| | - Giulio Cerullo
- Dipartimento di Fisica, IFN-CNR, Politecnico di Milano, Piazza L. da Vinci, 32, 20133, Milan, Italy
| | - Václav Perlík
- Faculty of Mathematics and Physics, Institute of Physics, Charles University, Ke Karlovu 5, 12116, Prague, Czech Republic
| | - František Šanda
- Faculty of Mathematics and Physics, Institute of Physics, Charles University, Ke Karlovu 5, 12116, Prague, Czech Republic
| | - Heiko Lokstein
- Department of Chemical Physics and Optics, Charles University, Ke Karlovu 3, 12116, Praha 2, Czech Republic
| | - Jürgen Hauer
- Photonics Institute, TU Wien, Gußhausstraße 27, 1040, Vienna, Austria.
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21
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Balevičius V, Lincoln CN, Viola D, Cerullo G, Hauer J, Abramavicius D. Effects of tunable excitation in carotenoids explained by the vibrational energy relaxation approach. PHOTOSYNTHESIS RESEARCH 2018; 135:55-64. [PMID: 28741055 DOI: 10.1007/s11120-017-0423-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2017] [Accepted: 07/09/2017] [Indexed: 05/20/2023]
Abstract
Carotenoids are fundamental building blocks of natural light harvesters with convoluted and ultrafast energy deactivation networks. In order to disentangle such complex relaxation dynamics, several studies focused on transient absorption measurements and their dependence on the pump wavelength. However, such findings are inconclusive and sometimes contradictory. In this study, we compare internal conversion dynamics in [Formula: see text]-carotene, pumped at the first, second, and third vibronic progression peak. Instead of employing data fitting algorithms based on global analysis of the transient absorption spectra, we apply a fully quantum mechanical model to treat the high-frequency symmetric carbon-carbon (C=C and C-C) stretching modes explicitly. This model successfully describes observed population dynamics as well as spectral line shapes in their time-dependence and allows us to reach two conclusions: Firstly, the broadening of the induced absorption upon excess excitation is an effect of vibrational cooling in the first excited state ([Formula: see text]). Secondly, the internal conversion rate between the second excited state ([Formula: see text]) and [Formula: see text] crucially depends on the relative curve displacement. The latter point serves as a new perspective on solvent- and excitation wavelength-dependent experiments and lifts contradictions between several studies found in literature.
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Affiliation(s)
- Vytautas Balevičius
- School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London, E1 4NS, UK
| | - Craig N Lincoln
- Photonics Institute, TU Wien, Gusshausstr. 27, 1040, Vienna, Austria
| | - Daniele Viola
- IFN-CNR, Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milan, Italy
| | - Giulio Cerullo
- IFN-CNR, Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milan, Italy
| | - Jürgen Hauer
- Photonics Institute, TU Wien, Gusshausstr. 27, 1040, Vienna, Austria
| | - Darius Abramavicius
- Department of Theoretical Physics, Vilnius University, Sauletekio al. 9-III, 10222, Vilnius, Lithuania.
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22
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Yu J, Fu LM, Yu LJ, Shi Y, Wang P, Wang-Otomo ZY, Zhang JP. Carotenoid Singlet Fission Reactions in Bacterial Light Harvesting Complexes As Revealed by Triplet Excitation Profiles. J Am Chem Soc 2017; 139:15984-15993. [DOI: 10.1021/jacs.7b09809] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jie Yu
- Department
of Chemistry, Renmin University of China, Beijing 100872, P. R. China
| | - Li-Min Fu
- Department
of Chemistry, Renmin University of China, Beijing 100872, P. R. China
| | - Long-Jiang Yu
- Faculty
of Science, Ibaraki University, Mito 310-8512, Japan
- Department
of Biology, Faculty of Science, Okayama University, Okayama 700-8530, Japan
| | - Ying Shi
- Department
of Chemistry, Renmin University of China, Beijing 100872, P. R. China
| | - Peng Wang
- Department
of Chemistry, Renmin University of China, Beijing 100872, P. R. China
| | | | - Jian-Ping Zhang
- Department
of Chemistry, Renmin University of China, Beijing 100872, P. R. China
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23
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Kowalewski M, Fingerhut BP, Dorfman KE, Bennett K, Mukamel S. Simulating Coherent Multidimensional Spectroscopy of Nonadiabatic Molecular Processes: From the Infrared to the X-ray Regime. Chem Rev 2017; 117:12165-12226. [DOI: 10.1021/acs.chemrev.7b00081] [Citation(s) in RCA: 81] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Markus Kowalewski
- Department
of Chemistry and Department of Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
| | - Benjamin P. Fingerhut
- Max-Born-Institut für Nichtlineare Optik und Kurzzeitspektroskopie, D-12489 Berlin, Germany
| | - Konstantin E. Dorfman
- State
Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China
| | - Kochise Bennett
- Department
of Chemistry and Department of Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
| | - Shaul Mukamel
- Department
of Chemistry and Department of Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
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24
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Kuznetsova V, Southall J, Cogdell RJ, Fuciman M, Polívka T. Spectroscopic properties of the S1 state of linear carotenoids after excess energy excitation. Chem Phys Lett 2017. [DOI: 10.1016/j.cplett.2017.03.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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25
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Kuznetsova V, Chábera P, Litvín R, Polívka T, Fuciman M. Effect of Isomerization on Excited-State Dynamics of Carotenoid Fucoxanthin. J Phys Chem B 2017; 121:4438-4447. [DOI: 10.1021/acs.jpcb.7b02526] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Valentyna Kuznetsova
- Institute
of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Pavel Chábera
- Division
of Chemical Physics, Lund University, P.O. Box 124, Lund SE-22100, Sweden
| | - Radek Litvín
- Institute
of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 37005 České Budějovice, Czech Republic
- Institute
of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences, 37005 České Budějovice, Czech Republic
| | - Tomáš Polívka
- Institute
of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 37005 České Budějovice, Czech Republic
- Institute
of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences, 37005 České Budějovice, Czech Republic
| | - Marcel Fuciman
- Institute
of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 37005 České Budějovice, Czech Republic
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26
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Fox KF, Balevičius V, Chmeliov J, Valkunas L, Ruban AV, Duffy CDP. The carotenoid pathway: what is important for excitation quenching in plant antenna complexes? Phys Chem Chem Phys 2017; 19:22957-22968. [DOI: 10.1039/c7cp03535g] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Plant light-harvesting is regulated by the Non-Photochemical Quenching (NPQ) mechanism involving the slow trapping of excitation energy by carotenoids in the Photosystem II (PSII) antenna in response to high light.
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Affiliation(s)
- Kieran F. Fox
- School of Biological and Chemical Sciences
- Queen Mary University of London
- London E1 4NS
- UK
| | - Vytautas Balevičius
- School of Biological and Chemical Sciences
- Queen Mary University of London
- London E1 4NS
- UK
| | - Jevgenij Chmeliov
- Department of Theoretical Physics
- Faculty of Physics
- Vilnius University
- Sauletekio Ave. 9
- 10222 Vilnius
| | - Leonas Valkunas
- Department of Theoretical Physics
- Faculty of Physics
- Vilnius University
- Sauletekio Ave. 9
- 10222 Vilnius
| | - Alexander V. Ruban
- School of Biological and Chemical Sciences
- Queen Mary University of London
- London E1 4NS
- UK
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27
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Zhang HD, Qiao Q, Xu RX, Yan Y. Effects of Herzberg–Teller vibronic coupling on coherent excitation energy transfer. J Chem Phys 2016; 145:204109. [DOI: 10.1063/1.4968031] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hou-Dao Zhang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemical Physics and Synergetic Innovation Center of Quantum Information and Quantum Physics and iChEM, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Qin Qiao
- Discipline of Neuroscience and Department of Anatomy, Histology and Embryology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China
| | - Rui-Xue Xu
- Discipline of Neuroscience and Department of Anatomy, Histology and Embryology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China
| | - YiJing Yan
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemical Physics and Synergetic Innovation Center of Quantum Information and Quantum Physics and iChEM, University of Science and Technology of China, Hefei, Anhui 230026, China
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Balevičius V, Abramavicius D, Polívka T, Galestian
Pour A, Hauer J. A Unified Picture of S* in Carotenoids. J Phys Chem Lett 2016; 7:3347-3352. [PMID: 27509302 PMCID: PMC5011297 DOI: 10.1021/acs.jpclett.6b01455] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2016] [Accepted: 08/10/2016] [Indexed: 05/29/2023]
Abstract
In π-conjugated chain molecules such as carotenoids, coupling between electronic and vibrational degrees of freedom is of central importance. It governs both dynamic and static properties, such as the time scales of excited state relaxation as well as absorption spectra. In this work, we treat vibronic dynamics in carotenoids on four electronic states (|S0⟩, |S1⟩, |S2⟩, and |Sn⟩) in a physically rigorous framework. This model explains all features previously associated with the intensely debated S* state. Besides successfully fitting transient absorption data of a zeaxanthin homologue, this model also accounts for previous results from global target analysis and chain length-dependent studies. Additionally, we are able to incorporate findings from pump-deplete-probe experiments, which were incompatible to any pre-existing model. Thus, we present the first comprehensive and unified interpretation of S*-related features, explaining them by vibronic transitions on either S1, S0, or both, depending on the chain length of the investigated carotenoid.
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Affiliation(s)
- Vytautas Balevičius
- Department
of Theoretical Physics, Faculty of Physics, Vilnius University, Sauletekio Avenue 9, Building 3, LT-10222 Vilnius, Lithuania
| | - Darius Abramavicius
- Department
of Theoretical Physics, Faculty of Physics, Vilnius University, Sauletekio Avenue 9, Building 3, LT-10222 Vilnius, Lithuania
| | - Tomáš Polívka
- Institute
of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 37005 České Budějovice, Czech
Republic
| | | | - Jürgen Hauer
- Photonics
Institute, TU Wien, Gusshausstrasse
27, 1040 Vienna, Austria
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29
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Challenges facing an understanding of the nature of low-energy excited states in photosynthesis. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2016; 1857:1627-1640. [PMID: 27372198 DOI: 10.1016/j.bbabio.2016.06.010] [Citation(s) in RCA: 63] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2016] [Revised: 06/27/2016] [Accepted: 06/28/2016] [Indexed: 01/09/2023]
Abstract
While the majority of the photochemical states and pathways related to the biological capture of solar energy are now well understood and provide paradigms for artificial device design, additional low-energy states have been discovered in many systems with obscure origins and significance. However, as low-energy states are naively expected to be critical to function, these observations pose important challenges. A review of known properties of low energy states covering eight photochemical systems, and options for their interpretation, are presented. A concerted experimental and theoretical research strategy is suggested and outlined, this being aimed at providing a fully comprehensive understanding.
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Staleva H, Zeeshan M, Chábera P, Partali V, Sliwka HR, Polívka T. Ultrafast Dynamics of Long Homologues of Carotenoid Zeaxanthin. J Phys Chem A 2015; 119:11304-12. [PMID: 26502350 DOI: 10.1021/acs.jpca.5b08460] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Three zeaxanthin homologues with conjugation lengths N of 15, 19, and 23 denoted as Z15, Z19, and Z23 were studied by femtosecond transient absorption spectroscopy, and the results were compared to those obtained for zeaxanthin (Z11). The energies of S2 decrease from 20 450 cm(-1) (Z11) to 18 280 cm(-1) (Z15), 17 095 cm(-1) (Z19), and 16 560 cm(-1) (Z23). Fitting the N dependence of the S2 energies allowed the estimation of [Formula: see text], the S2 energy of a hypothetical infinite zeaxanthin, to be ∼14 000 cm(-1). Exciting the 0-0 band of the S2 state produces characteristic S1-Sn spectral profiles in transient absorption spectra with maxima at 556 nm (Z11), 630 nm (Z15), 690 nm (Z19), and 740 nm (Z23). The red shift of the S1-Sn transition with increasing conjugation length is caused by a decrease in the S1 state energy, resulting in S1 lifetimes of 9 ps (Z11), 0.9 ps (Z15), 0.35 ps (Z19), and 0.19 ps (Z23). Essentially the same lifetimes were obtained after excess energy excitation at 400 nm, but S1-Sn becomes broader, indicating a larger conformation disorder in the S1 state after 400 nm excitation compared to excitation into the 0-0 band of the S2 state. An S* signal was observed in all samples, but only for Z15, Z19, and Z23 does the S* signal decay with a lifetime different from that of the S1 state. The S* lifetimes are 2.9 and 1.6 ps for Z15 and Z19, respectively. In Z23 the S* signal needs two decay components yielding lifetimes of 0.24 and 2.3 ps. The S* signal is more pronounced after 400 nm excitation.
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Affiliation(s)
- Hristina Staleva
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Muhammad Zeeshan
- Department of Chemistry, Norwegian University of Science and Technology , 7491 Trondheim, Norway
| | - Pavel Chábera
- Department of Chemical Physics, Lund University , SE-221 00 Lund, Sweden
| | - Vassilia Partali
- Department of Chemistry, Norwegian University of Science and Technology , 7491 Trondheim, Norway
| | - Hans-Richard Sliwka
- Department of Chemistry, Norwegian University of Science and Technology , 7491 Trondheim, Norway
| | - Tomáš Polívka
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
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32
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Keşan G, Durchan M, Tichý J, Minofar B, Kuznetsova V, Fuciman M, Šlouf V, Parlak C, Polívka T. Different Response of Carbonyl Carotenoids to Solvent Proticity Helps To Estimate Structure of the Unknown Carotenoid from Chromera velia. J Phys Chem B 2015; 119:12653-63. [PMID: 26362118 DOI: 10.1021/acs.jpcb.5b08152] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
In order to estimate the possible structure of the unknown carbonyl carotenoid related to isofucoxanthin from Chromera velia denoted as isofucoxanthin-like carotenoid (Ifx-l), we employed steady-state and ultrafast time-resolved spectroscopic techniques to investigate spectroscopic properties of Ifx-l in various solvents. The results were compared with those measured for related carotenoids with known structure: fucoxanthin (Fx) and isofucoxanthin (Ifx). The experimental data were complemented by quantum chemistry calculations and molecular modeling. The data show that Ifx-l must have longer effective conjugation length than Ifx. Yet, the magnitude of polarity-dependent changes in Ifx-l is larger than for Ifx, suggesting significant differences in structure of these two carotenoids. The most interesting spectroscopic feature of Ifx-l is its response to solvent proticity. The transient absorption data show that (1) the magnitude of the ICT-like band of Ifx-l in acetonitrile is larger than in methanol and (2) the S1/ICT lifetime of Ifx-l in acetonitrile, 4 ps, is markedly shorter than in methanol (10 ps). This is opposite behavior than for Fx and Ifx whose S1/ICT lifetimes are always shorter in protic solvent methanol (20 and 13 ps) than in aprotic acetonitrile (30 and 17 ps). Comparison with other carbonyl carotenoids reported earlier showed that proticity response of Ifx-l is consistent with presence of a conjugated lactone ring. Combining the experimental data and quantum chemistry calculations, we estimated a possible structure of Ifx-l.
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Affiliation(s)
- Gürkan Keşan
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Milan Durchan
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic.,Institute of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences , České Budějovice, Czech Republic
| | - Josef Tichý
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic.,Institute of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences , České Budějovice, Czech Republic
| | - Babak Minofar
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic.,Center for Nanobiology and Structural Biology, Institute of Microbiology and Global Change Research Center, Academy of Sciences of the Czech Republic , Nové Hrady, Czech Republic
| | - Valentyna Kuznetsova
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Marcel Fuciman
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Václav Šlouf
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Cemal Parlak
- Department of Physics, Dumlupınar University , Kütahya, Turkey
| | - Tomáš Polívka
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic.,Institute of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences , České Budějovice, Czech Republic
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