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Serrano GP, Echavarría CF, Mejias SH. Development of artificial photosystems based on designed proteins for mechanistic insights into photosynthesis. Protein Sci 2024; 33:e5164. [PMID: 39276008 PMCID: PMC11400635 DOI: 10.1002/pro.5164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2024] [Revised: 08/14/2024] [Accepted: 08/19/2024] [Indexed: 09/16/2024]
Abstract
This review aims to provide an overview of the progress in protein-based artificial photosystem design and their potential to uncover the underlying principles governing light-harvesting in photosynthesis. While significant advances have been made in this area, a gap persists in reviewing these advances. This review provides a perspective of the field, pinpointing knowledge gaps and unresolved challenges that warrant further inquiry. In particular, it delves into the key considerations when designing photosystems based on the chromophore and protein scaffold characteristics, presents the established strategies for artificial photosystems engineering with their advantages and disadvantages, and underscores the recent breakthroughs in understanding the molecular mechanisms governing light-harvesting, charge separation, and the role of the protein motions in the chromophore's excited state relaxation. By disseminating this knowledge, this article provides a foundational resource for defining the field of bio-hybrid photosystems and aims to inspire the continued exploration of artificial photosystems using protein design.
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Affiliation(s)
- Gonzalo Pérez Serrano
- Madrid Institute for Advanced Studies (IMDEA‐Nanoscience)Ciudad Universitaria de CantoblancoMadridSpain
| | - Claudia F. Echavarría
- Madrid Institute for Advanced Studies (IMDEA‐Nanoscience)Ciudad Universitaria de CantoblancoMadridSpain
| | - Sara H. Mejias
- Madrid Institute for Advanced Studies (IMDEA‐Nanoscience)Ciudad Universitaria de CantoblancoMadridSpain
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Madrid-Úsuga D, Ortiz A, Reina JH. Photophysical Properties of BODIPY Derivatives for the Implementation of Organic Solar Cells: A Computational Approach. ACS OMEGA 2022; 7:3963-3977. [PMID: 35155892 PMCID: PMC8829925 DOI: 10.1021/acsomega.1c04598] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Accepted: 11/22/2021] [Indexed: 06/14/2023]
Abstract
Solar cells based on organic compounds are a proven emergent alternative to conventional electrical energy generation. Here, we provide a computational study of power conversion efficiency optimization of boron dipyrromethene (BODIPY) derivatives by means of their associated open-circuit voltage, short-circuit density, and fill factor. In doing so, we compute for the derivatives' geometrical structures, energy levels of frontier molecular orbitals, absorption spectra, light collection efficiencies, and exciton binding energies via density functional theory (DFT) and time-dependent (TD)-DFT calculations. We fully characterize four D-π-A (BODIPY) molecular systems of high efficiency and improved J sc that are well suited for integration into bulk heterojunction (BHJ) organic solar cells as electron-donor materials in the active layer. Our results are twofold: we found that molecular complexes with a structural isoxazoline ring exhibit a higher power conversion efficiency (PCE), a useful result for improving the BHJ current, and, on the other hand, by considering the molecular systems as electron-acceptor materials, with P3HT as the electron donor in the active layer, we found a high PCE compound favorability with a pyrrolidine ring in its structure, in contrast to the molecular systems built with an isoxazoline ring. The theoretical characterization of the electronic properties of the BODIPY derivatives provided here, computed with a combination of ab initio methods and quantum models, can be readily applied to other sets of molecular complexes to hierarchize optimal power conversion efficiency.
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Affiliation(s)
- Duvalier Madrid-Úsuga
- Centre
for Bioinformatics and Photonics—CIBioFi, Universidad del Valle, Calle 13 No. 100-00, Edificio E20 No. 1069, 760032 Cali, Colombia
- Quantum
Technologies, Information and Complexity Group—QuanTIC, Departamento
de Física, Universidad del Valle, 760032 Cali, Colombia
| | - Alejandro Ortiz
- Centre
for Bioinformatics and Photonics—CIBioFi, Universidad del Valle, Calle 13 No. 100-00, Edificio E20 No. 1069, 760032 Cali, Colombia
- Heterocyclic
Compounds Research Group—GICH, Departamento de Química, Universidad del Valle, 760032 Cali, Colombia
| | - John H. Reina
- Centre
for Bioinformatics and Photonics—CIBioFi, Universidad del Valle, Calle 13 No. 100-00, Edificio E20 No. 1069, 760032 Cali, Colombia
- Quantum
Technologies, Information and Complexity Group—QuanTIC, Departamento
de Física, Universidad del Valle, 760032 Cali, Colombia
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Madrid-Úsuga D, Reina JH. Molecular Structure, Quantum Coherence, and Solvent Effects on the Ultrafast Electron Transport in BODIPY- C60 Derivatives. J Phys Chem A 2021; 125:2518-2531. [PMID: 33754739 DOI: 10.1021/acs.jpca.1c00603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Photoinduced electron transfer in multichromophore molecular systems is defined by a critical interplay between their core unit configuration (donor, molecular bridge, and acceptor) and their system-solvent coupling; these lead to energy and charge transport processes that are key in the design of molecular antennas for efficient light harvesting and organic photovoltaics. Here, we quantify the ultrafast non-Markovian dissipative dynamics of electron transfer in D-π-A molecular photosystems comprising 1,3,5,7-tetramethyl-8-phenyl-4,4-difluoroboradiazaindacene (BODIPY), Zn-porphyrin, fulleropyrrolidine, and fulleroisoxazoline. We find that the stabilization energy of the charge transfer states exhibits a significant variation for different polar (methanol, tetrahydrofuran (THF)) and nonpolar (toluene) environments and determine such sensitivity according to the molecular structure and the electron-vibration couplings that arise at room temperature. For the considered donor-acceptor (D-A) dyads, we show that the stronger the molecule-solvent coupling, the larger the electron transfer rates, regardless of the dyads' electronic coherence properties. We find such coupling strengths to be the largest (lowest) for methanol (toluene), with an electron transfer rate difference of 2 orders of magnitude between the polar and nonpolar solvents. For the considered donor-bridge-acceptor (D-B-A) triads, the molecular bridge introduces an intermediate state that allows the realization of Λ or cascaded-type energy mechanisms. We show that the latter configuration, obtained for BDP-ZnP-[PyrC60] in methanol, exhibits the highest transfer rate of all of the computed triads. Remarkably, and in contrast with the dyads, we show that the larger charge transfer rates are obtained for triads that exhibit prolonged electron coherence and population oscillations.
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Affiliation(s)
- Duvalier Madrid-Úsuga
- Centre for Bioinformatics and Photonics-CIBioFi, Universidad del Valle, Calle 13 No. 100-00, Edificio E20 No. 1069, 760032 Cali, Colombia.,Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
| | - John H Reina
- Centre for Bioinformatics and Photonics-CIBioFi, Universidad del Valle, Calle 13 No. 100-00, Edificio E20 No. 1069, 760032 Cali, Colombia.,Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
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González LE, Ordoñez JE, Melo-Luna CA, Mendoza E, Reyes D, Zambrano G, Porras-Montenegro N, Granada JC, Gómez ME, Reina JH. Experimental realisation of tunable ferroelectric/superconductor
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1D photonic crystals in the whole visible spectrum. Sci Rep 2020; 10:13083. [PMID: 32753626 PMCID: PMC7403599 DOI: 10.1038/s41598-020-69811-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 07/17/2020] [Indexed: 11/25/2022] Open
Abstract
Emergent technologies that make use of novel materials and quantum properties of light states are at the forefront in the race for the physical implementation, encoding and transmission of information. Photonic crystals (PCs) enter this paradigm with optical materials that allow the control of light propagation and can be used for optical communication, and photonics and electronics integration, making use of materials ranging from semiconductors, to metals, metamaterials, and topological insulators, to mention but a few. Here, we show how designer superconductor materials integrated into PCs fabrication allow for an extraordinary reduction of electromagnetic waves damping, making possible their optimal propagation and tuning through the structure, below critical superconductor temperature. We experimentally demonstrate, for the first time, a successful integration of ferroelectric and superconductor materials into a one-dimensional (1D) PC composed of( B T O / Y B C O ) N / S T O bilayers that work in the whole visible spectrum, and below (and above) critical superconductor temperatureT C = 80 K . Theoretical calculations support, for different number of bilayers N, the effectiveness of the produced 1D PCs and may pave the way for novel optoelectronics integration and information processing in the visible spectrum, while preserving their electric and optical properties.
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Affiliation(s)
- Luz E. González
- Centre for Bioinformatics and Photonics (CIBioFi), Universidad del Valle, Edificio E20 No. 1069, 760032 Cali, Colombia
- Solid State Theoretical Physics Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
- Facultad de Ciencias Naturales y Matemáticas, Universidad de Ibagué, 730001 Ibagué, Colombia
| | - John E. Ordoñez
- Thin Films Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
| | - Carlos A. Melo-Luna
- Centre for Bioinformatics and Photonics (CIBioFi), Universidad del Valle, Edificio E20 No. 1069, 760032 Cali, Colombia
- Quantum Technologies, Information and Complexity Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
| | - Evelyn Mendoza
- Thin Films Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
| | - David Reyes
- Centre d’Élaboration de Matériaux et d’Etudes Structurales (CEMES) CNRS-UPR 8011, 29 Rue Jeanne Marvig, 31055 Toulouse, France
| | - Gustavo Zambrano
- Thin Films Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
| | - Nelson Porras-Montenegro
- Centre for Bioinformatics and Photonics (CIBioFi), Universidad del Valle, Edificio E20 No. 1069, 760032 Cali, Colombia
- Solid State Theoretical Physics Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
| | - Juan C. Granada
- Centre for Bioinformatics and Photonics (CIBioFi), Universidad del Valle, Edificio E20 No. 1069, 760032 Cali, Colombia
- Solid State Theoretical Physics Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
| | - Maria E. Gómez
- Thin Films Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
| | - John H. Reina
- Centre for Bioinformatics and Photonics (CIBioFi), Universidad del Valle, Edificio E20 No. 1069, 760032 Cali, Colombia
- Quantum Technologies, Information and Complexity Group, Departamento de Física, Universidad del Valle, 760032 Cali, Colombia
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