SadPhos Library: A Comprehensive Resource for Exploring Chiral Ligand Chemical Space

Traditionally, the discovery of ligands for organic reactions has relied heavily on the intuition and experience of chemists, leading to a trial-and-error process that is both time-consuming and inherently biased. The rise of data science now offers a more systematic and efficient approach to exploring chemical spaces, moving beyond the heuristic constraints of conventional ligand design and enabling a more data-driven, predictive method. In this study, we introduce "SadPhos Library", a comprehensive collection of 890 reported chiral sulfinamide phosphine ligands, and use physical organic descriptors to systematically map their chemical space. By examining a small dataset of known active ligands, we demonstrate how SadPhos library can help identify key properties associated with ligand performance and thus streamline the process of ligand optimization. Furthermore, employing dimensionality reduction and clustering techniques, we pinpoint a representative subset of SadPhos ligands that facilitates more targeted and efficient exploration of this diverse chemical landscape.

31P Nuclear Magnetic Resonance Spectroscopy for Monitoring Organic Reactions and Organic Compounds

31P NMR spectroscopy is a consolidated tool for the characterization of organophosphorus compounds and, more recently, for reaction monitoring. The evolution of organic synthesis, mainly due to the combination of elaborated building blocks with enabling technologies, generated great challenges to understand and to optimize the synthetic methodologies. In this sense, 31P NMR experiments also became a routine technique for reaction monitoring, accessing products and side products yields, chiral recognition, kinetic data, intermediates, as well as basic organic parameters, such as acid-base and hydrogen-bonding. This review deals with these aspects demonstrating the essential role of the 31P NMR spectroscopy. The recent publications (the last ten years) will be explored, discussing the experiments of 31P NMR and the strategies accomplished to detect and/or quantify distinct organophosphorus molecules, approaching reaction mechanism, stability, stereochemistry, and the utility as a probe.

Metal-Free Enantioselective 1,4-Addition of Diarylphosphine Oxides to α,β-Unsaturated Carboxylic Esters

The catalytic asymmetric conjugate addition of phosphorus nucleophiles to unsaturated compounds, catalyzed by metallic or nonmetallic catalysts, has been extensively developed. However, the enantioselective transformations involving α,β-unsaturated carboxylic esters for constructing chiral c-p bonds have been rarely reported, particularly in metal-free processes. In this study, we present a novel metal-free methodology for enantioselective 1,4-addition of diarylphosphine oxides to α,β-unsaturated carboxylic esters using classical chiral oxazaborolidine catalysts. Remarkably high yields and enantioselectivities were obtained for most of the products. Furthermore, these valuable chiral phosphorus esters serve as crucial intermediates that can be transformed into various derivatives including amides, acids, and alcohols in a single step.

Application of phosphorus-bridged rigid, bent bis(NHCs) as dipodal ligands in main group and transition metal chemistry

Phosphorus-bridged rigid, bent bis(N-heterocyclic) carbenes have not been reported, so far, despite having structural features that could make them interesting ligands in coordination and main group element chemistry. In previous reports, we had demonstrated that tuning of σ3- and σ4-phosphorus environments in planarised bis(NHCs) affects electronic properties and can provide additional coordination sites. Herein, we report on first examples of synthesis and conversion of 1,4-diphosphabarrelene-related compounds into rigid bent, doubly P-bridged bis(NHCs). The formation of main group element adducts with substrates from group 13, 14 and 15 illustrates opportunities to access novel scaffolds and to create nonplanar branching points. DFT calculations reveal the new bis(NHCs) to be good candidates as novel soft/hard ligands with up to four coordination sites. The synthesis of a dinuclear Fe(CO)4 complex is demonstrated. The thermal retro-[4 + 2] cycloaddition was theoretically and experimentally explored for a variety of ionic and zwitterionic 1,4-diphosphabarrelenes, and the generation and trapping of a dinuclear Fe(0) bis(NHC) complex with a tricyclic 1σ2,4 σ2-diphosphinine scaffold is presented.

Pd(II)- and Pt(II)-Assisted P-C Activation/Cyclization Reactions with a Luminescent α-Aminophosphine

There is unceasing interest toward transformations of phosphine derivatives, which are facilitated by transition metals. We report a facile Pd(II)- and Pt(II)-assisted P-C bond cleavage in a luminescent 2-phenylbenzothiazole-based α-methylaminophosphine (PCN, 1). Specifically, reactions between 1 and [M(COD)Cl2] (M = Pd, Pt; COD = cycloocta-1,5-diene) in different solvents (methylene chloride, acetonitrile, pyridine, toluene) resulted in the formation of PPh2-, captured either as a bridging ligand in binuclear complexes with a {M2(PPh2)2} moiety or as an adduct to COD in [Pt2(PPh2COD)2Cl2]. The heterocyclic part transforms to annulated c-CN+ species with a 1,2-dihydroquinazoline cycle formed. In the presence of pyridine as a base, annulated form c-CN+ destabilizes and undergoes reverse cyclization transforming to deprotonated CN form. Quantum-chemical density functional theory (DFT) calculations predict that a crucial step in the reactions involves proton transfer from the N atom of the amino group of PCN to a neighboring molecule. A combination of high photophysical sensitivity of c-CN+ toward its immediate environment and rich structural capabilities in assembling (c-CN)22+ pairs in different crystal packings in a family of phases with the general formula (c-CN)2[M2(PPh2)2Cl4] allows one to fine-tune the luminescence properties of the latter. The results were rationalized as a variation of π-π intercationic spacings, which tunes the degree of excited-state charge transfer between c-CN+ cations. As a result, compounds with relatively short interplanar π-π-separation between the cations show a stronger charge-transfer-mediated bathochromic shift.

Dioxaphosphabicyclooctanes: small caged phosphines from tris(hydroxymethyl)phosphine

Dioxaphosphabicyclo[2.2.2]octanes (L1-L4) have been prepared in a one-pot reaction from tris(hydroxymethyl)phosphine and various α,β-unsaturated ketones. The non-volatile phosphines oxidise very slowly in air. They possess highly upfield 31P chemical shifts (-59 to -70 ppm), small cone angles (121-140°) and a similar electronic parameter to PPh3. Reaction of L1 with [Rh(acac)(CO)2] gave the complex [Rh(acac)(CO)(L1)] with a ν(CO) of 1981.5 cm-1, whereas reaction L1 with [Rh(CO)2Cl]2 gave [Rh(CO)(L1)2Cl] with a ν(CO) of 1979.9 cm-1, remarkably similar to the CO stretching frequencies reported for analogous PPh3 complexes. The cage phosphines were explored as ligands in rhodium catalysed hydroformylation of 1-octene. All of the ligands gave a linear selectivity to n-nonanal of 68%, regardless of the substituents. However the ligand substituents had a significant effect on the catalyst activity, with increased steric bulk around the coordination environment giving a three-fold increase in aldehyde yield. The phosphines undergo ligand subsitution with [Pd(MeCN)2Cl2] forming square planar trans-[Pd(L)2Cl2] complexes. Subsequent reduction with hydrazine furnishes homoleptic tetravalent [Pd(L1)4] which was applied as a catalyst in Suzuki-Miyaura couplings, furnishing the C-C coupled products in moderate yields.

Fusing Triphenylbismuth and PnPh3 (Pn = P-Bi): Synthesis, Isolation, and Characterization of 9-Bisma-10-Pnictatriptycenes

The first series of 9-bisma-10-pnictatriptycenes Bi(C6H4)3Pn (2-Pn, Pn = P-Bi; see graphic) has been synthesized in a two-step procedure via suitable tris(2-bromophenyl)pnictanes 1-Pn and characterized in solution as well as in the solid state. DFT calculations suggest preferential interactions between 2-Pn and soft Lewis acids via the lighter pnictogen donor atom. Experimental studies demonstrate that even the weakest Lewis base in the series of 2-Pn, namely the dibismatriptycene 2-Bi, interacts with Lewis acidic [BiMe2(SbF6)] in solution. Analytical techniques include (VT-)NMR spectroscopy, DOSY NMR spectroscopy, high-resolution mass spectrometry, single-crystal X-ray diffraction analyses, and DFT calculations.

New cationic coinage metal complexes featuring silyl group functionalized phosphine: syntheses, structures and catalytic studies in alkyne-azide cycloaddition reactions

A series of coinage metal complexes bearing rarely explored ortho-silylated phosphine is reported. The treatment of diphenyl(2-(trimethylsilyl)phenyl)phosphine (1) with CuCl and [Cu(CH3CN)4]BF4 furnished the corresponding neutral [(1)CuCl]2 (2) and mono-cationic [(1)2Cu(CH3CN)]BF4 (3) complexes, respectively. The reactions of 1 with AgX (X = BF4-, NO3-) in 2 : 1 ratio furnished the corresponding mono cationic dicoordinate silver(I) complexes of the type [(1)2Ag]X (X = BF4- (4a), NO3- (4b)). The ortho-silylated phosphine ligand (1) was conveniently converted into the corresponding sulfide (5a) and selenide (5b) species, and their reactions with [Cu(CH3CN)4]BF4 yielded mono-cationic, homoleptic tris(silylphosphinochalcogenide)copper(I) complexes of the type [(5a/5b)3Cu]BF4 (6a/6b). The molecular structures of 2-4 and 6 were established by single-crystal X-ray diffraction analysis. The copper complexes 2, 3, and 6a were employed as catalysts in azide-alkyne cycloaddition reactions. Among these complexes, 3 was extensively used in the preparation of various mono- and bis-triazoles consisting of tolyl, benzyl, carbazolyl, and propargylic ether groups. Three sets of substituted triazole derivatives were achieved under mild conditions by employing copper(I) catalytic systems. The mechanistic studies indicated the formation of a heteroleptic copper(I) triazolide intermediate which was detected by high-resolution mass spectral analysis.

Synthesis of Hybrid Ligands with Nitrile and Cage Phosphane Donor Groups and their Applications in Gold-Mediated Reactions

Altering the donor properties of phosphane ligands through substituent variation is an established tool in coordination chemistry and catalysis. This contribution describes the synthesis of two new hybrid donors (L) combining 1,3,5,7-tetramethyl-2,4,6-trioxa-8-phosphaadamantane-8-yl (PCg) and nitrile donor groups at different molecular scaffolds, viz. ferrocene-1,1'-diyl (fc) and 1,2-phenylene. These ligands were used to prepare dimeric Au(I) complexes [Au2 (μ(P,N)-L)2 ][SbF6 ]2 , which were evaluated as silver-free, preformed catalysts in Au-mediated cycloisomerization of (Z)-3-methylpent-2-en-4-yn-1-ol to 2,3-dimethylfuran. The catalyst featuring the ferrocene-based ligand, viz., [Au2 (μ(P,N)-CgPfcCN)2 ][SbF6 ]2 , showed the best catalytic performance at low catalyst loading (0.5 or 0.15 mol.%), which exceeded that of its diphenylphosphanyl analog [Au2 (μ(P,N)-Ph2 PfcCN)2 ][SbF6 ]2 studied earlier and the prototypical Au(I) precatalyst [Au(PPh3 )(MeCN)][SbF6 ].

The heterometallic one-dimensional solvated coordination polymer [NiPt2Cl6(TRIP-Py)4]n

The ditopic ligand 10-[4-(pyridin-4-yl)phenyl]-9-phospha-10-silatriptycene (TRIP-Py, C29H20NPSi) binds as a pyridine donor to NiII and as a phosphatriptycene donor towards PtII. The selectivity relies entirely on the Pearson character of the donor sites and the matching hardness of the respective metal cations. The product is the one-dimensional coordination polymer catena-poly[[[dichloridonickel(II)]-bis{μ-10-[4-(pyridin-4-yl)phenyl]-9-phospha-10-silatriptycene}-bis[dichloridoplatinum(II)]-bis{μ-10-[4-(pyridin-4-yl)phenyl]-9-phospha-10-silatriptycene}] dichloromethane pentasolvate ethanol icosasolvate], {[NiPt2Cl6(TRIP-Py)4]·5CH2Cl2·20EtOH}n (1), which retains large pores due to the inherent rigidity of the ligand. This is enabled by the caged triptycene scaffold which fixes the direction of the phosphorus donor with respect to the remaining molecule and especially the pyridyl moiety. In its crystal structure, which was determined from synchrotron data, the pores of the polymer are filled with dichloromethane and ethanol molecules. Finding a suitable model for the pore content is complicated as it is too disordered to give a reasonable atomic model but too ordered to be described by an electron gas solvent mask. This article presents an in-depth description of this polymer, as well as a discussion on the use of the bypass algorithm for solvent masks.

Rapid plugged flow synthesis of nucleoside analogues via Suzuki-Miyaura coupling and heck Alkenylation of 5-Iodo-2'-deoxyuridine (or cytidine)

Nucleosides modification via conventional cross-coupling has been performed using different catalytic systems and found to take place via long reaction times. However, since the pandemic, nucleoside-based antivirals and vaccines have received widespread attention and the requirement for rapid modification and synthesis of these moieties has become a major objective for researchers. To address this challenge, we describe the development of a rapid flow-based cross-coupling synthesis protocol for a variety of C5-pyrimidine substituted nucleosides. The protocol allows for facile access to multiple nucleoside analogues in very good yields in a few minutes compared to conventional batch chemistry. To highlight the utility of our approach, the synthesis of an anti-HSV drug, BVDU was also achieved in an efficient manner using our new protocol.

Graphical abstract

Supplementary Information

The online version contains supplementary material available at 10.1007/s41981-023-00265-1.

Facile One-Step Access to Pyrrole-Based 1,4-Diphosphabarrelenes

1,4-Diphosphabarrelenes are bicyclic diphosphines relevant, for example, for the generation of polymetallic coordination compounds. However, current synthetic protocols either suffer from low yields or require multiple reaction steps. Herein, we report the one-step synthesis of pyrrole-based 1,4-diphosphabarrelenes that are obtained in very good yields from the reaction of 1,2,5-trimethylpyrrole with 1,2-bis(dichlorophosphino)ethane or 1,2-bis(dichlorophosphino)benzene. The new caged diphosphines are strong donor ligands and act as bridging ligand in nickel(0), rhodium(I), iridium(I) and copper(I) coordination compounds.

A Rigid Linker for Site-Selective Coordination of Transition Metal Cations: Combining an Acetylacetone with a Caged Phosphine

The combination of a soft phosphorus and a hard oxygen donor in the new ligand HacacTRIP leads to excellent site selectivity for the coordination of two different metal cations of matching Pearson character. The deprotonation step required for coordinating the acetylacetone oxygen donor further increases the selectivity. In contrast to most phosphines, the use of the caged phosphatriptycene motif enables a rigid and directional orientation of the phosphorus binding site which is required to form stable coordination network structures. In addition to the synthesis of HacacTRIP, we present its selective coordination. The deprotonated acetylacetone was selectively bound to Cu^II and Fe^III. The solid state structure of the former displays a rare axial coordination of chloroform molecules. The phosphorus donor was selectively coordinated to the monovalent coinage metal cations Cu^I, Ag^I, and Au^I. The Cu^I and Ag^I complexes represent the first examples in which a phosphatriptycene is bound to these metal cations. Heterometallic coordination compounds were characterized with combinations of these two groups. They comprise an oligonuclear Cu^I/Cu^II mixed-valence compound in which iodide binds to both Cu^I and Cu^II cations and a complex in which acacTRIP^- bridges Cu^II and Au^I. In addition to these discrete aggregates, the ligand has been used to link Fe^III and Ag^I into a 2D coordination polymer with unprecedented trigonal planar coordination of three bulky phosphatriptycenes to a cation and resulting honeycomb topology. Its almost regular hexagons underline the desired rigidity of the ditopic acacTRIP^- ligand.

Diametric calix[6]arene-based phosphine gold(I) cavitands

We report the synthesis and characterization, in low polarity solvents, of a novel class of diametric phosphine gold(I) cavitands characterized by a 1,2,3-alternate geometry. Preliminary catalytic studies were performed on a model cycloisomerization of 1,6-enynes as a function of the relative orientation of the bonded gold(I) nuclei with respect to the macrocyclic cavity.

Forever young: the first seventy years of ferrocene

The discovery of ferrocene, [Fe(η5-C5H5)2], seventy years ago has significantly influenced chemical research and provided a key impetus for establishing and rapidly expanding organometallic chemistry, which has continued at a...

Rh-catalyzed asymmetric hydrogenation of α- and β-enamido phosphonates: highly enantioselective access to amino phosphonic acids

Broad substrate scope; high isloated yield and enantioselectivity; novel hybrid bisphosphine ligands; gram-scale reaction with lower catalyst usage.

Phosphorus or Nitrogen - The first Phosphatriptycene in Coordination Polymer Chemistry

Phosphasilatriptycene, a phenylene spacer and a pyridyl moiety represent the building blocks of TRIP-Py, the first heteroditopic ligand featuring a phoshatriptycene scaffold. The P and N donor sites located at...

Catalytic Approaches to Multicomponent Reactions: A Critical Review and Perspectives on the Roles of Catalysis

In this review, we comprehensively describe catalyzed multicomponent reactions (MCRs) and the multiple roles of catalysis combined with key parameters to perform these transformations. Besides improving yields and shortening reaction times, catalysis is vital to achieving greener protocols and to furthering the MCR field of research. Considering that MCRs typically have two or more possible reaction pathways to explain the transformation, catalysis is essential for selecting a reaction route and avoiding byproduct formation. Key parameters, such as temperature, catalyst amounts and reagent quantities, were analyzed. Solvent effects, which are likely the most neglected topic in MCRs, as well as their combined roles with catalysis, are critically discussed. Stereocontrolled MCRs, rarely observed without the presence of a catalytic system, are also presented and discussed in this review. Perspectives on the use of catalytic systems for improved and greener MCRs are finally presented.

Bicyclic Bridgehead Phosphoramidite-Based Hybrid Diphosphorus Ligands: Design, Synthesis, and Application in Catalytic Asymmetric Hydrogenation

A strategy for chiral ligand design has been developed that allows for incorporation of an achiral bicyclic bridgehead phosphoramidite to generate a class of hybrid diphosphorus ligands for high activity and asymmetric control. Using this concept, a series of chiral phosphine-phosphoramidite ligands bearing the sole chirality at the ligand backbone have been prepared and successfully employed in the Rh-catalyzed asymmetric hydrogenation of 2-vinylanilides for the synthesis of optically active anilines bearing an ortho-tertiary benzylic stereocenter.

Room-Temperature Amination of Chloroheteroarenes in Water by a Recyclable Copper(II)-Phosphaadamantanium Sulfonate System

Buchwald-Hartwig amination of chloroheteroarenes has been a challenging synthetic process, with very few protocols promoting this important transformation at ambient temperature. The current report discusses about an efficient copper-based catalytic system (Cu/PTABS) for the amination of chloroheteroarenes at ambient temperature in water as the sole reaction solvent, a combination that is first to be reported. A wide variety of chloroheteroarenes could be coupled efficiently with primary and secondary amines as well as selected amino acid esters under mild reaction conditions. Catalytic efficiency of the developed protocol also promotes late-stage functionalization of active pharmaceutical ingredients (APIs) such as antibiotics (floxacins) and anticancer drugs. The catalytic system also performs efficiently at a very low concentration of 0.0001 mol % (TON = 980,000) and can be recycled 12 times without any appreciable loss in activity. Theoretical calculations reveal that the π-acceptor ability of the ligand PTABS is the main reason for the appreciably high reactivity of the catalytic system. Preliminary characterization of the catalytic species in the reaction was carried out using UV-VIS and ESR spectroscopy, providing evidence for the Cu(II) oxidation state.

Hetero-Diels–Alder reactions of 2H-phospholes with allenes: synthesis and functionalization of 6-methylene-1-phosphanorbornenes

The phospha-Diels–Alder reaction between 2H-phospholes and arylallenes affords 6-methylene-1-phosphanorbornenes in high yields with excellent regioselectivity. Further functionalization provides a 1-phosphanorbornene modified PCH₂CH₂P skeleton.