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Nwankwo C, Hou J, Cui HL. Extracellular proteases from halophiles: diversity and application challenges. Appl Microbiol Biotechnol 2023; 107:5923-5934. [PMID: 37566160 DOI: 10.1007/s00253-023-12721-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Revised: 07/26/2023] [Accepted: 08/01/2023] [Indexed: 08/12/2023]
Abstract
Halophilic extracellular proteases offer promising application in various fields. Information on these prominent proteins including the synthesizing organisms, biochemical properties, domain organisation, purification, and application challenges has never been covered in recent reviews. Although extracellular proteases from bacteria pioneered the study of proteases in halophiles, progress is being made in proteases from halophilic archaea. Recent advances in extracellular proteases from archaea revealed that archaeal proteases are more robust and applicable. Extracellular proteases are composed of domains that determine their mechanisms of action. The intriguing domain structure of halophilic extracellular proteases consists of N-terminal domain, catalytic domain, and C-terminal extension. The role of C-terminal domains varies among different organisms. A high diversity of C-terminal domains would endow the proteases with diverse functions. With the development of genomics, culture-independent methods involving heterologous expression, affinity chromatography, and in vitro refolding are deployed with few challenges on purification and presenting novel research opportunities. Halophilic extracellular proteases have demonstrated remarkable potentials in industries such as detergent, leather, peptide synthesis, and biodegradation, with desirable properties and ability to withstand harsh industrial processes. KEY POINTS: • Halophilic extracellular proteases have robust properties suitable for applications. • A high diversity of C-terminal domains may endow proteases with diverse properties. • Novel protease extraction methods present novel application opportunities.
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Affiliation(s)
- Chidiebele Nwankwo
- School of Food and Biological Engineering, Jiangsu University, 301 Xuefu Road, Jingkou District, Zhenjiang, 212013, Jiangsu, People's Republic of China
- Natural Sciences Unit, School of General Studies, University of Nigeria, Nsukka, 410002, Enugu State, Nigeria
- Department of Microbiology, Faculty of Biological Sciences, University of Nigeria, Nsukka, 410002, Enugu State, Nigeria
| | - Jing Hou
- School of Food and Biological Engineering, Jiangsu University, 301 Xuefu Road, Jingkou District, Zhenjiang, 212013, Jiangsu, People's Republic of China.
| | - Heng-Lin Cui
- School of Food and Biological Engineering, Jiangsu University, 301 Xuefu Road, Jingkou District, Zhenjiang, 212013, Jiangsu, People's Republic of China.
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Borchert AJ, Bleem A, Beckham GT. RB-TnSeq identifies genetic targets for improved tolerance of Pseudomonas putida towards compounds relevant to lignin conversion. Metab Eng 2023; 77:208-218. [PMID: 37059293 DOI: 10.1016/j.ymben.2023.04.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2023] [Revised: 03/21/2023] [Accepted: 04/12/2023] [Indexed: 04/16/2023]
Abstract
Lignin-derived mixtures intended for bioconversion commonly contain high concentrations of aromatic acids, aliphatic acids, and salts. The inherent toxicity of these chemicals places a significant bottleneck upon the effective use of microbial systems for the valorization of these mixtures. Pseudomonas putida KT2440 can tolerate stressful quantities of several lignin-related compounds, making this bacterium a promising host for converting these chemicals to valuable bioproducts. Nonetheless, further increasing P. putida tolerance to chemicals in lignin-rich substrates has the potential to improve bioprocess performance. Accordingly, we employed random barcoded transposon insertion sequencing (RB-TnSeq) to reveal genetic determinants in P. putida KT2440 that influence stress outcomes during exposure to representative constituents found in lignin-rich process streams. The fitness information obtained from the RB-TnSeq experiments informed engineering of strains via deletion or constitutive expression of several genes. Namely, ΔgacAS, ΔfleQ, ΔlapAB, ΔttgR::Ptac:ttgABC, Ptac:PP_1150:PP_1152, ΔrelA, and ΔPP_1430 mutants showed growth improvement in the presence of single compounds, and some also exhibited greater tolerance when grown using a complex chemical mixture representative of a lignin-rich chemical stream. Overall, this work demonstrates the successful implementation of a genome-scale screening tool for the identification of genes influencing stress tolerance against notable compounds within lignin-enriched chemical streams, and the genetic targets identified herein offer promising engineering targets for improving feedstock tolerance in lignin valorization strains of P. putida KT2440.
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Affiliation(s)
- Andrew J Borchert
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN, USA
| | - Alissa Bleem
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN, USA
| | - Gregg T Beckham
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
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Ares Á, Sakai S, Sasaki T, Shimamura S, Mitarai S, Nunoura T. Sequestration and efflux largely account for cadmium and copper resistance in the deep-sea Nitratiruptor sp. SB155-2 (phylum Campylobacterota). Environ Microbiol 2022; 24:6144-6163. [PMID: 36284406 PMCID: PMC10092412 DOI: 10.1111/1462-2920.16255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Accepted: 10/20/2022] [Indexed: 01/12/2023]
Abstract
In deep-sea hydrothermal vent environments, metal-enriched fluids and sediments abound, making these habitats ideal to study metal resistance in prokaryotes. In this investigation, we employed transcriptomics and shotgun proteomics with scanning transmission electron microscopy and energy-dispersive x-ray spectroscopy (STEM-EDX) to better understand mechanisms of tolerance for cadmium (Cd) and copper (Cu) at stress-inducing concentrations in Nitratiruptor sp. SB155-2 (phylum Campylobacterota). Transcriptomic profiles were remarkably different in the presence of these two metals, displaying 385 (19%) and 629 (31%) differentially transcribed genes (DTG) in the presence of Cd(II) and Cu(II), respectively, while only 7% of differentially transcribed (DT) genes were shared, with genes for non-specific metal transporters and genes involved in oxidative stress-response predominating. Transcriptomic and proteomic analyses confirmed that metal-specific DT pathways under Cu(II) stress, including those involving sulfur, cysteine, and methionine, are likely required for high-affinity efflux systems, while flagella formation and chemotaxis were over-represented under Cd(II) stress. Consistent with these differences, STEM-EDX analysis revealed that polyphosphate-like granules (pPLG), the formation of CdS particles, and the periplasmic space are crucial for Cd(II) sequestration. Overall, this study provides new insights regarding metal-specific adaptations of Campylobacterota to deep-sea hydrothermal vent environments.
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Affiliation(s)
- Ángela Ares
- Marine Biophysics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, Japan
| | - Sanae Sakai
- Super-Cutting-Edge Grand and Advanced Research (SUGAR) Program, Institute for Extra-cutting-edge Science and Technology Avant-garde Research (X-STAR), Japan Agency for Marine-Earth Science & Technology (JAMSTEC), Yokosuka, Japan
| | - Toshio Sasaki
- Imaging section, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, Japan
| | - Shigeru Shimamura
- Super-Cutting-Edge Grand and Advanced Research (SUGAR) Program, Institute for Extra-cutting-edge Science and Technology Avant-garde Research (X-STAR), Japan Agency for Marine-Earth Science & Technology (JAMSTEC), Yokosuka, Japan
| | - Satoshi Mitarai
- Marine Biophysics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, Japan
| | - Takuro Nunoura
- Research and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan
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4
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Rationally tailoring the halophilicity of an amylolytic enzyme for application in dehydrating conditions. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2022.108708] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Xia Y, Jiang X, Wang Y, Huang Q, Chen D, Hou C, Mu Y, Shen J. Enhanced anaerobic reduction of nitrobenzene at high salinity by betaine acting as osmoprotectant and regulator of metabolism. WATER RESEARCH 2022; 223:118982. [PMID: 36058098 DOI: 10.1016/j.watres.2022.118982] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Revised: 07/24/2022] [Accepted: 08/13/2022] [Indexed: 06/15/2023]
Abstract
Anaerobic technology is extensively applied in the treatment of industrial organic wastewater, but high salinity always triggers microbial cell dehydration, causing the failure of the anaerobic process. In this work, betaine, one kind of compatible solutes which could balance the osmotic pressure of anaerobic biomass, was exogenously added for enhancing the anaerobic reduction of nitrobenzene (NB) at high salinity. Only 100 mg L-1 betaine dosing could significantly promote the removal efficiency of NB within 35 h at 9% salinity (36.92 ± 4.02% without betaine and 72.94 ± 6.57% with betaine). The relieving effects on salt stress could be observed in the promotion of more extracellular polymeric substances (EPS) secretion with betaine addition. Additionally, the oxidation-reduction potential (ORP), as well as the electron transfer system (ETS) value, was increased with betaine addition, which was reflected in the improvement of system removal efficiency and enzyme activity. Microbial community analysis demonstrated that Bacillus and Clostridiisalibacter which were positively correlated with the stability of the anaerobic process were enriched with betaine addition at high salinity. Metagenomic analysis speculated that the encoding genes for salt tolerance (kdpB/oadA/betA/opuD/epsP/epsH) and NB degradation (nfsA/wrbA/ccdA/menC) obtained higher relative abundance with betaine addition under high salt environment, which might be the key to improving salt tolerance of anaerobic biomass. The long-term assessment demonstrated that exogenous addition betaine played an important role in maintaining the stability of the anaerobic system, which would be a potential strategy to achieve a high-efficiency anaerobic process under high salinity conditions.
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Affiliation(s)
- Yan Xia
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China
| | - Xinbai Jiang
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China.
| | - Yuxuan Wang
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China
| | - Qian Huang
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China
| | - Dan Chen
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China
| | - Cheng Hou
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China
| | - Yang Mu
- CAS Key Laboratory of Urban Pollutant Conversion, Department of Applied Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Jinyou Shen
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, China.
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Feng Y, Ming T, Zhou J, Lu C, Wang R, Su X. The Response and Survival Mechanisms of Staphylococcus aureus under High Salinity Stress in Salted Foods. Foods 2022; 11:foods11101503. [PMID: 35627073 PMCID: PMC9140498 DOI: 10.3390/foods11101503] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2022] [Revised: 05/11/2022] [Accepted: 05/20/2022] [Indexed: 11/29/2022] Open
Abstract
Staphylococcus aureus (S. aureus) has a strong tolerance to high salt stress. It is a major reason as to why the contamination of S. aureus in salted food cannot be eradicated. To elucidate its response and survival mechanisms, changes in the morphology, biofilm formation, virulence, transcriptome, and metabolome of S. aureus were investigated. IsaA positively regulates and participates in the formation of biofilm. Virulence was downregulated to reduce the depletion of nonessential cellular functions. Inositol phosphate metabolism was downregulated to reduce the conversion of functional molecules. The MtsABC transport system was downregulated to reduce ion transport and signaling. Aminoacyl-tRNA biosynthesis was upregulated to improve cellular homeostasis. The betaine biosynthesis pathway was upregulated to protect the active structure of proteins and nucleic acids. Within a 10% NaCl concentration, the L-proline content was upregulated to increase osmotic stability. In addition, 20 hub genes were identified through an interaction analysis. The findings provide theoretical support for the prevention and control of salt-tolerant bacteria in salted foods.
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Affiliation(s)
- Ying Feng
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo University, Ningbo 315211, China; (Y.F.); (T.M.); (J.Z.); (C.L.); (X.S.)
- College of Life Sciences, Tonghua Normal University, Tonghua 134000, China
- School of Marine Sciences, Ningbo University, Ningbo 315211, China
| | - Tinghong Ming
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo University, Ningbo 315211, China; (Y.F.); (T.M.); (J.Z.); (C.L.); (X.S.)
- School of Marine Sciences, Ningbo University, Ningbo 315211, China
| | - Jun Zhou
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo University, Ningbo 315211, China; (Y.F.); (T.M.); (J.Z.); (C.L.); (X.S.)
- School of Marine Sciences, Ningbo University, Ningbo 315211, China
| | - Chenyang Lu
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo University, Ningbo 315211, China; (Y.F.); (T.M.); (J.Z.); (C.L.); (X.S.)
- School of Marine Sciences, Ningbo University, Ningbo 315211, China
| | - Rixin Wang
- School of Marine Sciences, Ningbo University, Ningbo 315211, China
- Correspondence: ; Tel.: +86-574-8760-8368
| | - Xiurong Su
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo University, Ningbo 315211, China; (Y.F.); (T.M.); (J.Z.); (C.L.); (X.S.)
- School of Marine Sciences, Ningbo University, Ningbo 315211, China
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Csitári B, Bedics A, Felföldi T, Boros E, Nagy H, Máthé I, Székely AJ. Anion-type modulates the effect of salt stress on saline lake bacteria. Extremophiles 2022; 26:12. [PMID: 35137260 PMCID: PMC8825391 DOI: 10.1007/s00792-022-01260-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2021] [Accepted: 01/10/2022] [Indexed: 11/29/2022]
Abstract
Beside sodium chloride, inland saline aquatic systems often contain other anions than chloride such as hydrogen carbonate and sulfate. Our understanding of the biological effects of salt composition diversity is limited; therefore, the aim of this study was to examine the effect of different anions on the growth of halophilic bacteria. Accordingly, the salt composition and concentration preference of 172 strains isolated from saline and soda lakes that differed in ionic composition was tested using media containing either carbonate, chloride or sulfate as anion in concentration values ranging from 0 to 0.40 mol/L. Differences in salt-type preference among bacterial strains were observed in relationship to the salt composition of the natural habitat they were isolated from indicating specific salt-type adaptation. Sodium carbonate represented the strongest selective force, while majority of strains was well-adapted to growth even at high concentrations of sodium sulfate. Salt preference was to some extent associated with taxonomy, although variations even within the same bacterial species were also identified. Our results suggest that the extent of the effect of dissolved salts in saline lakes is not limited to their concentration but the type of anion also substantially impacts the growth and survival of individual microorganisms.
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Affiliation(s)
- Bianka Csitári
- Department of Microbiology, ELTE Eötvös Loránd University, Pázmány Péter stny. 1/c, 1117, Budapest, Hungary
- Department of Ecology and Genetics/Limnology, Uppsala University EBC, Norbyvägen 18D, 75236, Uppsala, Sweden
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solnavägen 9, 17165, Stockholm, Sweden
| | - Anna Bedics
- Department of Microbiology, ELTE Eötvös Loránd University, Pázmány Péter stny. 1/c, 1117, Budapest, Hungary
- Depatment of Molecular Ecology, Institute of Aquaculture and Environmental Safety, Hungarian University of Agriculture and Life Sciences, Páter Károly utca 1, 2100, Gödöllő, Hungary
| | - Tamás Felföldi
- Department of Microbiology, ELTE Eötvös Loránd University, Pázmány Péter stny. 1/c, 1117, Budapest, Hungary
- Institute of Aquatic Ecology, Centre for Ecological Research, Karolina u. 29, 1113, Budapest, Hungary
| | - Emil Boros
- Institute of Aquatic Ecology, Centre for Ecological Research, Karolina u. 29, 1113, Budapest, Hungary
| | - Hajnalka Nagy
- Department of Microbiology, ELTE Eötvös Loránd University, Pázmány Péter stny. 1/c, 1117, Budapest, Hungary
| | - István Máthé
- Department of Bioengineering, Sapientia Hungarian University of Transylvania, Piaţa Libertăţii 1, 530104, Miercurea Ciuc, Romania
| | - Anna J Székely
- Department of Ecology and Genetics/Limnology, Uppsala University EBC, Norbyvägen 18D, 75236, Uppsala, Sweden.
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences (SLU), Box 7050, 75007, Uppsala, Sweden.
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Khan SA, Jung HS, Park HY, Jeon CO. Maritimibacter harenae sp. nov. and Sneathiella litorea sp. nov.: members of Alphaproteobacteria isolated from sea sand. Antonie van Leeuwenhoek 2021; 114:799-811. [PMID: 33770292 DOI: 10.1007/s10482-021-01559-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Accepted: 03/14/2021] [Indexed: 11/24/2022]
Abstract
Two Gram-negative, rod bacteria, strains DP07T and DP05T, showing catalase- and oxidase-positive activities, were isolated from sea sand in South Korea. Strain DP07T was strictly aerobic and had a yellow colony colour. Contrastingly, strain DP05T was facultatively aerobic and had a creamy colony colour. Both strains contained ubiquinone-10 as the sole isoprenoid quinone. Strain DP07T contained cyclo-C19:0 ω8c, C16:0, summed feature 8 (comprising C18:1 ω7c and/or C18:1 ω6c), and C16:0 2-OH as the major fatty acids and phosphatidylglycerol, phosphatidylethanolamine, an unidentified phospholipid, and an unidentified polar lipid as the major polar lipids. Strain DP05T contained C16:0, cyclo-C19:0, and summed feature 8 (comprising C18:1 ω7c and/or C18:1 ω6c) as the major fatty acids and phosphatidylglycerol, phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids as the major polar lipids. Cadaverine was detected as the predominant polyamine in both strains. The DNA G + C contents of strains DP07T and DP05T were 66.1 mol% and 51.8 mol%, respectively. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains DP07T and DP05T formed close phylogenetic lineages with Maritimibacter alkaliphilus HTCC2654T (similarity, 98.1%) and Sneathiella chungangensis CAU 1294 T (similarity, 98.5%), respectively. The average nucleotide identity and DNA-DNA hybridisation values between strain DP07T and M. alkaliphilus were 80.0% and 23.0%, respectively, and those between strain DP05T and S. chungangensis were 77.1% and 19.9%, respectively. Based on the results of phenotypic, chemotaxonomic, and molecular analyses, strains DP07T and DP05T represent two novel species of the genera Maritimibacter and Sneathiella, respectively, for which we propose the following names: Maritimibacter harenae sp. nov. and Sneathiella litorea sp. nov. The type strains of M. harenae and S. litorea were DP07T (= KACC 21429 T = JCM 33811 T) and DP05T (= KACC 21431 T = JCM 33810 T), respectively.
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Affiliation(s)
- Shehzad Abid Khan
- Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea
| | - Hye Su Jung
- Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea
| | - Hye Yoon Park
- National Institute of Biological Resources, Incheon, 22689, Republic of Korea
| | - Che Ok Jeon
- Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
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Song WS, Shin SG, Jo SH, Lee JS, Jeon HJ, Kwon JE, Park JH, Cho S, Jeong JH, Kim BG, Kim YG. Development of an in vitro coculture device for the investigation of host-microbe interactions via integrative multiomics approaches. Biotechnol Bioeng 2021; 118:1612-1623. [PMID: 33421096 DOI: 10.1002/bit.27676] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 12/26/2020] [Accepted: 12/29/2020] [Indexed: 01/05/2023]
Abstract
The commensal gut bacterium Akkermansia muciniphila is well known as a promising probiotic candidate that improves host health and prevents diseases. However, the biological interaction of A. muciniphila with human gut epithelial cells has rarely been explored for use in biotherapeutics. Here, we developed an in vitro device that simulates the gut epithelium to elucidate the biological effects of living A. muciniphila via multiomics analysis: the Mimetic Intestinal Host-Microbe Interaction Coculture System (MIMICS). We demonstrated that both human intestinal epithelial cells (Caco-2) and the anaerobic bacterium A. muciniphila can remain viable for 12 h after coculture in the MIMICS. The transcriptomic and proteomic changes (cell-cell junctions, immune responses, and mucin secretion) in gut epithelial cells treated with A. muciniphila closely correspond with those reported in previous in vivo studies. In addition, our proteomic and metabolomic results revealed that A. muciniphila activates glucose and lipid metabolism in gut epithelial cells, leading to an increase in ATP production. This study suggests that A. muciniphila improves metabolism for ATP production in gut epithelial cells and that the MIMICS may be an effective general tool for evaluating the effects of anaerobic bacteria on gut epithelial cells.
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Affiliation(s)
- Won-Suk Song
- School of Chemical and Biological Engineering, Seoul National University, Seoul, Korea
| | - Sung Gyu Shin
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
| | - Sung-Hyun Jo
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
| | - Jae-Seung Lee
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
| | - Hyo-Jin Jeon
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
| | - Ji-Eun Kwon
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
| | - Ji-Hyeon Park
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
| | - Sungwoo Cho
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
| | - Jae Hyun Jeong
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
| | - Byung-Gee Kim
- School of Chemical and Biological Engineering, Seoul National University, Seoul, Korea
| | - Yun-Gon Kim
- Department of Chemical Engineering, Soongsil University, Seoul, Korea
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