Toxicity assessment and microbial response to soil antibiotic exposure: differences between individual and mixed antibiotics

Effects of antibiotics on microbial nitrogen cycling and N2O emissions: A review

Sulfonamides, quinolones, tetracyclines, and macrolides are the most prevalent classes of antibiotics used in both medical treatment and agriculture. The misuse of antibiotics leads to their extensive dissemination in the environment. These antibiotics can modify the structure and functionality of microbial communities, consequently impacting microbial-mediated nitrogen cycling processes including nitrification, denitrification, and anammox. They can change the relative abundance of nirK/norB contributing to the emission of nitrous oxide, a potent greenhouse gas. This review provides a comprehensive examination of the presence of these four antibiotic classes across different environmental matrices and synthesizes current knowledge of their effects on the nitrogen cycle, including the underlying mechanisms. Such an overview is crucial for understanding the ecological impacts of antibiotics and for guiding future research directions. The presence of antibiotics in the environment varies widely, with significant differences in concentration and type across various settings. We conducted a comprehensive review of over 70 research articles that compare various aspects including processes, antibiotics, concentration ranges, microbial sources, experimental methods, and mechanisms of influence. Antibiotics can either inhibit, have no effect, or even stimulate nitrification, denitrification, and anammox, depending on the experimental conditions. The influence of antibiotics on the nitrogen cycle is characterized by dose-dependent responses, primarily inhibiting nitrification, denitrification, and anammox. This is achieved through alterations in microbial community composition and diversity, carbon source utilization, enzyme activities, electron transfer chain function, and the abundance of specific functional enzymes and antibiotic resistance genes. These alterations can lead to diminished removal of reactive nitrogen and heightened nitrous oxide emissions, potentially exacerbating the greenhouse effect and related environmental issues. Future research should consider diverse reaction mechanisms and expand the scope to investigate the combined effects of multiple antibiotics, as well as their interactions with heavy metals and other chemicals or organisms.

Chemistry of soil-type dependent soil matrices and its influence on behaviors of pharmaceutical compounds (PCs) in soils

Behaviors of pharmaceutical compounds (PCs) in soil are usually determined by experimental extrapolation of results from separate constitutes to the soil, or from a special soil to other regional soil conditions. However, such extrapolation is problematic due to variations in soil clay mineral and organic matter (OM) compositions with soil types, which dominate the interaction mechanisms of PCs in soil. It is essential to review current literature to enhance our understanding of the soil-type dependent surface chemistry of soil matrices and the environmental behavior of PCs in different soil types. Major types of soils occur globally in parallel to the latitudinal or altitudinal zonation due to regional climate conditions with distinct clay mineral and OM compositions. The soil-type dependent surface chemistry results in variations in retention, distribution, transport, and transformation PCs in soil. The mixture of PCs of different classes usually exhibited enhanced sorption due to the cooperative multilayer sorption on soil constituents, and that of the same class often caused differential adsorption capacity compared to the sorption from single compound due to competitive sorption. PCs preferentially adsorb to a soil component, or to a special soil type, and exhibit notably soil-type dependent sorption affinity, mobility, and dissipation. The soil-dependent surface chemistry of soil is critical to predict the persistence and bioavailability of PCs in soil. In the future, more detailed studies of influence of individual soil factor on the behaviors of PCs and especially the practical field site investigation are required to better understand the sorption, transport, transformation, and ecotoxicology of PCs in typical soil types.