Exploring potential impact(s) of cerium in mining wastewater on the performance of partial-nitrification process and nitrogen conversion microflora

Cerium Ce(III) is one of the major pollutants contained in wastewater generated during Ce(III) mining. However, the effect(s) of Ce(III) on the functional genera responsible for removing nitrogen biologically from wastewater has not been studied and reported. In this study, the effects of Ce(III) on aspects of partial-nitritation-(PN) process including ammonia oxidation rate (AOR), process kinetics, and microbial activities were investigated. It was found that the effect of dosing Ce(III) in the PN system correlated strongly with the AOR. Compared to the control, batch assays dosed with 5 mg/L Ce(III) showed elevated PN efficiency of about 121%, an indication that maximum biological response was feasible upon Ce(III) dose. It was also found that, PN performance was not adversely affected, given that Ce(III) dose was ≤20 mg/L. Process kinetics investigated also suggested that the maximum Ce(III) dose without any visible inhibition to the activities of ammonium oxidizing bacteria was 1.37 mg/L, but demonstrated otherwise when Ce(III) dose exceeded 5.63 mg/L. Compared to the control, microbes conducted efficient Ce(III) removal (averaged 98.66%) via biosorption using extracellular polymeric substances (EPS). Notably, significant deposits of Ce(III) was found within the EPS produced as revealed by SEM, EDX, CLSM and FTIR. 2-dimensional correlation infrared-(2DCOS-IR) revealed ester group (uronic acid) as a major organic functional group that promoted Ce(III) removal. Excitation-emission matrix-(EEM) spectrum and 2DCOS-IR suggested the dominance of Fulvic acid, hypothesized to have promoted the performance of the PN process under Ce(III) dosage.

Short-term effects of Mn2O3 nanoparticles on physiological activities and gene expression of nitrifying bacteria under low and high dissolved oxygen conditions

The short-term effects of Mn₂O₃ nanoparticles (NPs) were examined for nitrifying bacterial enrichments exposed under low and high dissolved oxygen (DO) conditions using substrate (ammonia) specific oxygen uptake rates (sOUR), reverse transcriptase - quantitative polymerase chain reaction (RT-qPCR) assays, and by analysis of 16S rRNA sequences. Samples from nitrifying bioreactor were exposed in batch vessels to Mn₂O₃ NPs (1, 5 and 10 mg/L) for either 1 or 3 h under no additional aeration or 0.25 L/min aeration. There was increase in nitrification inhibition as determined by sOUR with increasing dosages of Mn₂O₃ NPs for both low and high DO. At 10 mg/L Mn₂O₃ NPs, the inhibition was about 7-10% for 1 and 3 h exposure in both cases. There was notable reduction in the transcript levels of amoA, hao and nirK for 10 mg/L of Mn₂O₃ NPs under 3 h, high DO exposure, which corresponded well with sOUR. The 16S rRNA sequencing showed that there was an inhibitory effect on ammonia oxidizers activity upon exposure to 10 mg/L of Mn₂O₃ NPs. Collectively, the findings in this study advanced understanding of the different effects of Mn₂O₃ NPs on nitrifying bacteria.

Adding NBPT to urea increases N use efficiency of maize and decreases the abundance of N-cycling soil microbes under reduced fertilizer-N rate on the North China Plain

Urease inhibitor (UI) and nitrification inhibitor (NI) can reduce N losses from agricultural soils but effects of inhibitors on N cycle are unclear. A field experiment was conducted with maize to test effects of UI (N-(n-Butyl) thiophosphoric, NBPT) and NI (3,4-dimethylepyrazolephosphate, DMPP) on N uptake and N-cycling soil microbes. Five treatments were imposed: no N fertilizer input (CK), conventional fertilization (CF) and 80% of urea input with NBPT (80%U+UI), with DMPP (80%U+NI) and with half NBPT and half DMPP (80%U+1/2(UI+NI)). There were no significant differences in biomass between 80%U+UI, 80%U+NI and CF but harvest index was increased under 80%U+UI and 80%U+NI. Compared to CF, N use efficiency of grain under 80%U+UI was increased by 7.1%, whereas grain yield and N uptake under 80%U+1/2(UI+NI) were decreased by 8.2% and 9.4%, respectively. The peak soil NO3‐‐N content was at about 15 days after fertilization (DAF) under CF but 30 DAF under the inhibitor treatments. In soils of 80%U+UI, the activities of urease and nitrate reductase were decreased between 15–45 DAF and between 5–30 DAF. The abundance of N-cycling soil microbes was affected: 80%U+UI and 80%U+NI reduced the copies of the amoA AOA and nir genes at about 15 days and reduced the copies of the amoA AOB gene at about 30 days. Correlation analysis indicated that there were significant positive relationships between amoA AOB gene and NH4+‐N, as well as between nirK gene and NO3‐‐N. Overall, urea applied with NBPT has greater potential for improving maize N use efficiency and inhibiting nitrification under reduced fertilizer-N applications.

Do soil property variations affect dicyandiamide efficiency in inhibiting nitrification and minimizing carbon dioxide emissions?

Nitrification inhibitors (NIs) are used to retard the nitrification process and reduce nitrogen (N) losses. However, the effects of soil properties on NI efficacy are less clear. Moreover, the direct and indirect effects of soil property variations on NI efficiency in minimizing carbon dioxide (CO₂) emissions have not been previously studied. An incubation experiment was conducted for 40 days with two treatments, N (200 mg N-urea kg^-1) and N + dicyandiamide (DCD) (20 mg DCD kg^-1), and a control group (without the N) to investigate the response of ammonia-oxidizing bacteria (AOB) and archaea (AOA) to DCD application and the consequences for CO₂, nitrous oxide (N₂O) and ammonia (NH₃) emissions from six soils from the Loess Plateau with different properties. The nitrification process completed within 6-18 days for the N treatment and within 30->40 days for the N + DCD treatment. AOB increased significantly with N fertilizer application, while this effect was inhibited in soils when DCD was applied. AOA was not sensitive to N fertilizer and DCD application. The nitrification rate was positively correlated with the clay (p < 0.05) and SOM contents (p < 0.01); DCD was more effective in loam soil with low SOM and high soil pH. Soil pH significantly was decreased with N fertilizer application, while it increased when DCD was applied. Moreover, DCD application decreased CO₂ emissions from soils by 22%-172%; CO₂ emissions were negatively correlated with the clay and SOM contents. DCD application decreased N₂O emissions in each soil by 1.0- to 94-fold compared with those after N fertilizer application. In contrast, DCD application increased NH₃ release from soils by 59-278%. NH₃ volatilization was negatively correlated with clay (p < 0.05) and SOM (p < 0.01) contents and positively correlated with soil pH (p < 0.01). Therefore, soil texture, SOM and soil pH have significant effects on the DCD performance, nitrification process and gaseous emissions.

Trichloroethylene inhibits nitrogen transformation and microbial community structure in Mollisol

Trichloroethylene (TCE) is the most ubiquitous halogenated organic pollutant in the environment, it is one of the 129 priority control pollutants. In order to clarify the influence of TCE on microorganisms and nitrogen transformation in Mollisol is the core purpose of this study. Results showed that 10 mg kg^-1 TCE is the concentration limit of ammonification in Mollisol. When the concentration of TCE reached 10 mg kg^-1 and the effect lasted for over 7 days, the process of ammonia oxidation to nitric acid in Mollisol will be affected. TCE affected the process of nitrate (NO₃^-) transformation into nitrite (NO₂^-) by affecting the activity of nitrate reductase, thereby affected the denitrification process in soil. When the concentration of TCE is more than 10 mg kg^-1 it reduced the ability of soil microorganisms to obtain nitrogen, thereby affecting soil nitrogen transformation. RDA (Redundancy analysis) showed that the activity of nitrate reductase and the number of nitrifying bacteria and denitrifying bacteria in soil was negatively correlated with the incubation of TCE. In addition, soil nitrate reductase, nitrite reductase, peroxidase activity, ammonifying bacteria, nitrifying bacteria and denitrifying bacteria were negatively correlated with TCE concentration. Beyond that PICRUSt (Phylogenetic Investigation of Communities by Reconstruction of Unobserved States) of functional gene structure depend on KEGG (Kyoto Encyclopedia of Genes and Genomes) showed that 20 mg kg^-1 TCE significantly inhibited the metabolism of energy and other substances in Mollisol. Based on the above, it is found that TCE significantly affected nitrification and denitrification in Mollisol, thus the nitrogen transformation in Mollisol was affected by TCE contamination.

Tetracyclines lead to ammonium accumulation during nitrification process

The effect of tetracyclines used for swine food-production (tetracycline and oxytetracycline) on enriched nitrifying bacteria cultures over time was investigated in this study. Short-term exposure assays were performed in different concentrations of each antibiotic, using ammonia oxidizing bacteria (AOB) culture and nitrifying bacteria. The results pointed out a higher inhibitory effect of tetracycline on both bacterial communities. The AOB was more sensitive to antibiotic exposure when compared to the nitrifying culture. Although high antibiotic concentrations were applied, the half maximal inhibitory concentration (IC₅₀) was achieved only for the AOB culture exposed to tetracycline at a concentration of 273 mg L^-1. Nonetheless, the long-term exposure assay demonstrated a reduction of the tetracycline inhibition effect against AOB. The exposure to 100 mg L^-1 of tetracycline (TC) did not show relevant influence over ammonium conversion efficiency; however, at 128 mg L^-1 of TC, the efficiency decreased from 94% to 72%. Further investigation revealed that TC reduced the final effluent quality due to the development of a resistance mechanism by AOB culture against this antibiotic. This mechanism involves increasing the excretion of extracellular polymeric substances (EPS) and soluble microbial products (SMP), which probably increases BOD, and reduces ammonia consumption by the bacterial culture.

Effects of silver nanoparticles on coupled nitrification-denitrification in suspended sediments

The effects of varying concentrations of Ag NPs on coupled nitrification and denitrification (CND) in two suspended sediments (SPSs) sizes were investigated using isotopic tracer method. In general, 0.5 and 5 mg/L Ag NPs had less effect on CND, while 2 and 10 mg/L Ag NPs exhibited the improvement and inhibition effect, respectively. The CND improvement by 2 mg/L NPs was mainly due to the enhanced nitrifying and denitrifying enzyme activity. However, 10 mg/L Ag NPs inhibited NH₄⁺ oxidation by directly reducing the AMO activity and AOB abundance. The inhibition on NAR and NIR activity and their encoding narG and nirK gene abundance further inhibited NO₃^- and NO₂^- reduction, leading to a dramatic decrease in the ¹⁵N-N₂ production. The above inhibition effects were attributed to the nano-effects of Ag NPs, which led to the excessive ROS amount and the decreased T-AOC level in microbial systems. But the connection between nitrification and denitrification was not broken after Ag NPs exposure. Moreover, the results indicated that N-cycling in clay and silt-type SPS systems could be more sensitive than sand-type SPS systems to NP exposure. The findings provide a basis for evaluating the environmental risks of Ag NPs in water-sediment systems.

Evaluation of partial nitrification efficiency as a response to cadmium concentration and microplastic polyvinylchloride abundance during landfill leachate treatment

The partial nitrification efficiency response to the presence of cadmium (Cd²⁺) and microplastics was investigated. Microplastics polyvinylchloride (PVC) abundance was 0-10,000 particles/L, and Cd²⁺ concentration was 0-10 mg/L. Cd-only inhibited the NH₄⁺-N oxidation rate 1.21, 1.23, and 1.18 times with concentrations at 1, 5, and 10 mg/L, respectively. PVC-only inhibited NH₄⁺-N oxidation rate 1.01, 1.21 and 1.05 times with PVC abundance at 1000, 5000 and 10,000 particles/L, respectively. The ammonia oxidation rate was improved with the co-existence of PVC and Cd²⁺ at the conditions PVC1000 and PVC5000, which could be attributed to the PVC. PVC at 1000 particles/L could act as carrier and mitigate the negative effect of Cd²⁺ to the partial nitrification process. Moreover, the partial nitrification process was largely inhibited with PVC abundance at 10,000 particles/L. First-order kinetic models could simulate the NH₄⁺-N, NO₂^-N, and NO₃^--N changes in the partial nitrification process.

Diazole and triazole inhibition of nitrification process in return activated sludge

Azoles are emerging contaminants that are resistant to biodegradation during wastewater treatment. Their presence has been widely reported in wastewater effluents and receiving waters. In this work, the potential inhibition of nitrification process by six different azole compounds in wastewater treatment plants was investigated in batch bioassays. The azoles studied included three diazoles: pyrazole (Pz); 1-methylpyrazole (MePz); 3,5-dimethylpyrazole (DMePz); and three triazoles: 1,2,4-triazole (Tz); benzotriazole (BTz); and 5-methyl benzotriazole (MeBTz). The concentration of azoles causing 50% inhibition (IC₅₀) increased (azoles became less inhibitory) in the following order (mg L^-1): BTz (1.99) < MeBTz (2.18) < Pz (2.69) < Tz (3.53) < DMePz (17.3) < MePz (49.6). No clear structure-inhibitory relationships were found using Log P and pKa as structural properties. The toxicity of any given azole may be related to the role of substituent groups on disabling/enabling binding to the active sites of metallo-enzymes in nitrifying microorganisms. This is exemplified by the low toxicity of MePz, which has a cyclic N blocked by a methyl group. The observed inhibition caused to nitrifying bacteria is more severe than their cytotoxicity to other target organisms (e.g., methanogens and heterotrophic bacteria), suggesting a specific inhibition to the copper-containing enzyme, ammonium monooxygenase, in ammonia oxidizing nitrifying microorganisms.

Effects of warming and elevated O3 concentrations on N2O emission and soil nitrification and denitrification rates in a wheat-soybean rotation cropland

The effects of warming and elevated ozone (O3) concentrations on nitrous oxide (N2O) emission from cropland has received increasing attention; however, the small number of studies on this topic impedes understanding. A field experiment was performed to explore the role of warming and elevated O3 concentrations on N2O emission from wheat-soybean rotation cropland from 2012 to 2013 using open-top chambers (OTCs). Experimental treatments included ambient temperature (control), elevated temperature (+2 °C), elevated O3 (100 ppb), and combined elevated temperature (+2 °C) and O3 (100 ppb). Results demonstrate that warming significantly increased the accumulative amount of N2O (AAN) emitted from the soil-winter wheat system due to enhanced nitrification rates in the wheat farmland and nitrate reductase activity in wheat leaves. However, elevated O3 concentrations significantly decreased AAN emission from the soil-soybean system owing to reduced nitrification rates in the soybean farmland. The combined treatment of warming and elevated O3 inhibited the emission of N2O from the soybean farmland. Additionally, both the warming and combined treatments significantly increased soil nitrification rates in winter wheat and soybean croplands and decreased denitrification rates in the winter wheat cropping system. Our results suggest that global warming and elevated O3 concentrations will strongly affect N2O emission from wheat-soybean rotation croplands.

Tetracycline-induced effects on the nitrogen transformations in sediments: Roles of adsorption behavior and bacterial activity

Nitrification and denitrification are the most important nitrogen transformation processes in the environment. Recently, due to widespread use, antibiotics have been reported to lead to environmental risks. Tetracycline (TC) is one of the most extensively used antibiotics in many areas. However, its reported effects on nitrogen transformations were conflicting in previous studies. In this study, the effects of TC on nitrogen transformations in sediment were investigated by analyzing TC transport and bacterial activity. It was found that the adsorption of TC onto the sediment was favorable and spontaneous, with adsorption capacity 54.3 mg/kg. The adsorption kinetics of TC onto the sediment and the isotherm fitted the Elvoich and Freundlich models, respectively, indicating that the adsorption was a chemisorption process, including electrostatic interactions and chemical bonding between TC and the sediment. TC showed no effect on nitrification in the sediment, but significantly inhibited the reduction of nitrate and nitrite during denitrification, consistent with observations made for the model denitrifier Paracoccus denitrificans under TC stress. Mechanistic study indicated that TC at 130 μg/g-cell inhibited 50.7% of P. denitrificans growth and 61.6% of cell viability. Meanwhile, the catalytic activities of the key denitrifying enzymes, nitrate reductase (NAR) and nitrite reductase (NIR), decreased to 29.1% and 68.0% of the control levels when the TC concentration was 130 μg/g-cell, suggesting that NAR was more sensitive to the TC than NIR, which contributed to a delay in nitrite accumulation.

Denitrification responses to increasing cadmium exposure in Baltic Sea sediments

Benthic ecosystems have come under intense pressure, due to eutrophication-driven oxygen decline and industrial metal contamination. One of the most toxic metals is Cadmium (Cd), which is lethal to many aquatic organisms already at low concentrations. Denitrification by facultative anaerobic microorganisms is an essential process to transform, but also to remove, excess nitrate in eutrophied systems. Cd has been shown to decrease denitrification and sequester free sulfide, which is available when oxygen is scarce and generally inhibits complete denitrification (i.e. N₂O to N₂). In polluted sediments, an interaction between oxygen and Cd may influence denitrification and this relationship has not been studied. For example, in the Baltic Sea some sediments are double exposed to both Cd and hypoxia. In this study, we examined how the double exposure of Cd and fluctuations in oxygen affects denitrification in Baltic Sea sediment. Results show that oxygen largely regulated N₂O and N₂ production after 21 days of exposure to Cd (ranging from 0 to 500 μg/L, 5 different treatments, measured by the isotope pairing technique (IPT)). In the high Cd treatment (500 μg/L) the variation in N₂ production increased compared to the other treatments. Increases in N₂ production are suggested to be an effect of 1) enhanced nitrification that increases NO₃^- availability thus stimulating denitrification, and 2) Cd successfully sequestrating sulfide (yielding CdS), which allows for full denitrification to N₂. The in situ field sediment contained initially high Cd concentrations in the pore water (∼10 μg/L) and microbial communities might already have been adapted to metal stress, making the effect of low Cd levels negligible. Here we show that high levels of cadmium pollution might increase N₂ production and influence nitrogen cycling in marine sediments.

Long-term impact of sulfate on an autotrophic nitrogen removal system integrated partial nitrification, anammox and endogenous denitrification (PAED)

A nitrogen removal system integrating partial nitrification, anaerobic ammonium oxidation (Anammox) and endogenous denitrification (PAED) was established in a sequencing batch reactor (SBR) for treating low nitrogen sewage (approximately 40 mg L^-1 ammonia-nitrogen). The impact of sulfate on PAED sludge was investigated in five identical SBRs, fed with different levels of sulfate (0, 50, 100, 200 and 400 mg L^-1). Ammonia oxidation was improved by the addition of Results showed that the sulfate addition in low concentration of sulfate (≤50 mg L^-1), but was profoundly suppressed by higher levels of sulfate. Sulfate feeding enhanced both total nitrogen removal by Anammox and endogenous denitrification, with the abundance of Candidatus Kuenenia increasing to 4.39% in 400 mg L^-1 sulfate from 0.83% in the control reactor, and Denitratisoma increasing to 6.35% from 2.77%. The results proved the feasibility of the PAED system in treating low nitrogen sewage with sulfate, which also enhanced the nitrogen-sulfate interaction.

Influence of chlorothalonil and carbendazim fungicides on the transformation processes of urea nitrogen and related microbial populations in soil

To improve crop yielding, a large amount of fungicides is continuously applied during the agricultural management, while the effects of fungicides residues on microbial processing of N in soil need further study. In the present study, two broad spectrum fungicides, chlorothalonil and carbendazim, were applied at the rates of 5, 10, and 50 mg of active ingredient (A.I.) per kg of dry soil combined with urea with 200 mg of N per kg of dry soil under laboratory conditions. The results showed that chlorothalonil obviously retarded the hydrolysis of urea, whereas carbendazim accelerated it in 4 days after the treatments (P < 0.05). Chlorothalonil reduced denitrification, nitrification, and N₂O production (P < 0.05), but not for carbendazim. Further analysis on N-associated microbial communities showed chlorothalonil reduced nitrosomonas populations at the rates of 10 and 50 mg of A.I. per kg and autotrophic nitrifying bacterial populations at three application rates (P < 0.05), but Carbendazim decreased nitrosomonas populations only at the rate of 50 mg of A.I. per kg and also autotrophic nitrifying bacterial populations at three rates and heterotrophic nitrifying bacterial populations at the rates of 10 and 50 mg of A.I. per kg. The reasons for this difference were ascribed to arrest urea hydrolysis and impediment of denitrification and nitrification processes by chlorothalonil. In conclusion, to improve crop yielding, chlorothalonil might be more beneficial to conserve soil N by improving soil N fertility, compared with carbendazim.

PAC dosing to an MBBR - Effects on adsorption of micropollutants, nitrification and microbial community

Two nitrifying MBBR reactors were operated in parallel, one with PAC dosing and one without, to determine the effects of PAC dosing on nitrification and micropollutant adsorption in municipal wastewater. The removal of micropollutants was evaluated for several doses of PAC and batch experiments were performed to measure adsorption kinetics and nitrification rates. The influence of PAC on the nitrifying microbial community was examined by high-throughput amplicon sequencing. Long-term operation of the pilot reactors showed that nitrification could be maintained while supplying PAC at increasing doses, as confirmed by high nitrification rates and significant abundance of nitrifying bacteria. The adsorption of organic micropollutants could be controlled by the PAC dose, and increased dosing resulted in corresponding improvements in removal efficiency. Biomass, suspended or attached to carriers, did not interfere with the adsorption of organic micropollutants. Freundlich isotherms obtained from the batch experiments were used to predict removal of organic micropollutants in the pilot reactors, suggesting that batch adsorption experiments can be used to predict micropollutant removal on a full scale. Collectively, the results show that nitrification and adsorption of organic micropollutants can be performed simultaneously in an MBBR.

Acute and chronic toxicity of nickel to nitrifiers at different temperatures

This study investigated the acute nickel toxicity on nitrification of low ammonia synthetic wastewater at 10, 23, and 35°C. The nickel inhibition half-velocity constants (K_I,Ni) for ammonia oxidizing bacteria (AOB) and nitrite oxidizing bacteria (NOB) based on Ni/MLSS ratio at 10, 23, and 35°C were 5.4 and 5.6 mg Ni/g MLSS, 4.6 and 3.5 mg Ni/g MLSS, and 9.1 and 2.7 mg Ni/g MLSS, respectively. In addition, chronic toxicity of nickel to nitrification of low ammonia synthetic wastewater was investigated at 10°C in two sequencing batch reactors (SBRs). Long-term SBRs operation and short-term batch tests were comparable with respect to the extent of inhibition and corresponding Ni/MLSS ratio. The μ_max, b, and K_o of AOB were 0.16 day^-1, 0.098 day^-1 and 2.08 mg O₂/L after long-term acclimatization to nickel of 1 mg/L at 10°C, high dissolved oxygen (DO) (7 mg/L) and long solids retention time (SRT) of 63-70 days. Acute nickel toxicity of nitrifying bacteria was completely reversible.

Low yield and abiotic origin of N2O formed by the complete nitrifier Nitrospira inopinata

Nitrous oxide (N2O) and nitric oxide (NO) are atmospheric trace gases that contribute to climate change and affect stratospheric and ground-level ozone concentrations. Ammonia oxidizing bacteria (AOB) and archaea (AOA) are key players in the nitrogen cycle and major producers of N2O and NO globally. However, nothing is known about N2O and NO production by the recently discovered and widely distributed complete ammonia oxidizers (comammox). Here, we show that the comammox bacterium Nitrospira inopinata is sensitive to inhibition by an NO scavenger, cannot denitrify to N2O, and emits N2O at levels that are comparable to AOA but much lower than AOB. Furthermore, we demonstrate that N2O formed by N. inopinata formed under varying oxygen regimes originates from abiotic conversion of hydroxylamine. Our findings indicate that comammox microbes may produce less N2O during nitrification than AOB.

Multi-omic and physiologic approach to understand Lotus japonicus response upon exposure to 3,4 dimethylpyrazole phosphate nitrification inhibitor

Nitrogen fertilization is a major force in global greenhouse gases emissions and causes environmental contamination through nitrate leaching. The use of nitrification inhibitors has been proven successful to mitigate these effects. However, there is an increasing concern about the undesired effects that their potential persistence in the soil or accumulation in plants may provoke. In this study, we first exposed Lotus japonicus plants to high amounts of 3,4 dimethylpyrazole phosphate (DMPP) and 2-(N-3,4-dimethyl-1H-pyrazol-1-yl) succinic acid isomeric mixture (DMPSA) nitrification inhibitors. Exposure to doses higher than 1 mg·L^-1 provoked DMPP accumulation mostly in the aerial part, while DMPSA was only detected from 10 mg·L^-1 and nearly no translocation. To evaluate the effect that DMPP accumulation in leaves may provoke on plant performance we combined a transcriptome, proteome, and physiological analysis in plants treated with 10 mg/ L of DMPP. This treatment provoked changes in the expression of 229 genes and 59 proteins. Overall, we evidence that when DMPP accumulates in leaves it induces stress responses, notably provoking changes in cell redox balance, hormone signaling, protein synthesis and turnover and carbon and nitrogen metabolism.

Nitrification inhibitors effectively target N2 O-producing Nitrosospira spp. in tropical soil

The nitrification inhibitors (NIs) 3,4-dimethylpyrazole (DMPP) and dicyandiamide (DCD) can effectively reduce N2 O emissions; however, which species are targeted and the effect of these NIs on the microbial nitrifier community is still unclear. Here, we identified the ammonia oxidizing bacteria (AOB) species linked to N2 O emissions and evaluated the effects of urea and urea with DCD and DMPP on the nitrifying community in a 258 day field experiment under sugarcane. Using an amoA AOB amplicon sequencing approach and mining a previous dataset of 16S rRNA sequences, we characterized the most likely N2 O-producing AOB as a Nitrosospira spp. and identified Nitrosospira (AOB), Nitrososphaera (archaeal ammonia oxidizer) and Nitrospira (nitrite-oxidizer) as the most abundant, present nitrifiers. The fertilizer treatments had no effect on the alpha and beta diversities of the AOB communities. Interestingly, we found three clusters of co-varying variables with nitrifier operational taxonomic units (OTUs): the N2 O-producing AOB Nitrosospira with N2 O, NO3 - , NH4 + , water-filled pore space (WFPS) and pH; AOA Nitrososphaera with NO3 - , NH4 + and pH; and AOA Nitrososphaera and NOB Nitrospira with NH4 + , which suggests different drivers. These results support the co-occurrence of non-N2 O-producing Nitrososphaera and Nitrospira in the unfertilized soils and the promotion of N2 O-producing Nitrosospira under urea fertilization. Further, we suggest that DMPP is a more effective NI than DCD in tropical soil under sugarcane.

Rapid start-up and stable maintenance of domestic wastewater nitritation through short-term hydroxylamine addition

This study investigated the nitritation of domestic wastewater through the short-term addition of hydroxylamine (NH₂OH). Sequencing batch reactor (SBR) was used and the NH₂OH solution with an initial concentration of 5.0 mg/L was injected at each cycle. With NH₂OH addition, the nitritation was quickly established in 5 d with nitrite accumulation ratio above 95%. Further, stable nitritation could be maintained without NH₂OH addition in the following 53 days, even under unfavorable conditions (DO = 3 mg/L). According to qPCR results, NH₂OH significantly reduced and continuously suppressed nitrite oxidizing bacteria (NOB), while the abundance of ammonia oxidizing bacteria was stable, induced the start-up and maintenance of nitritation. Among NOB, NH₂OH significantly suppressed Nitrospira, while did not affect Nitrobactor. Nitrobactor gradually increased during the operation, which could induce the final deterioration of nitritation. Overall, this research provided the fundamental knowledge required to optimize the NH₂OH addition strategy for operating a stable nitritation in domestic wastewater.

Understanding the Mobilization of a Nitrification Inhibitor from Novel Slow Release Pellets, Fabricated through Extrusion Processing with PHBV Biopolymer

Dicyandiamide (DCD) has been studied as a stabilizer for nitrogen fertilizers for over 50 years. Its efficacy is limited at elevated temperatures, but this could be addressed by encapsulation to delay exposure. Here, poly(3-hydroxybutyrate- co-3-hydroxyvalerate) (PHBV) was investigated as a biodegradable matrix for the encapsulation of DCD. Cylindrical ∼3 mm × 3 mm pellets were fabricated through extrusion processing with 23 wt % DCD. Release kinetics were monitored in water, sand, and both active and γ-irradiated agricultural clay loam soils. Raman maps showed a wide particle size distribution of DCD crystals and indicated that Hitachi's classic moving front theory did not hold for this formulation. The inhibitor release kinetics were mediated by four distinct mechanisms: (i) initial rapid dissolution of surface DCD, (ii) channeling of water through voids and pores in the PHBV matrix, (iii) gradual diffusion of water and DCD through layers of PHBV, and (iv) biodegradation of the PHBV matrix. After ∼6 months, 45-100% release occurred, depending on the release media. PHBV is shown to be an effective, biodegradable matrix for the long-term slow release of nitrification inhibitors.

Effects of antibiotic residuals in dewatered sludge on the behavior of ammonia oxidizers during vermicomposting maturation process

Antibiotics existed in dewatered sludge may affect the organic decomposition and nitrification efficiency of vermicomposting process, and thus lowering the agricultural value of sludge vermicompost. However, few studies have focused on the effects of antibiotics during vermicomposting process of sludge, notably for the maturated phage. Hence, this study aimed to investigate the effects of antibiotics on the nitrification rate and the features of ammonia oxidizing archaea (AOA) and bacteria (AOB) during vermicomposting maturated phage of sludge. The treatments including the additions of tetracycline and ofloxacin with high and low concentrations were compared with the control without adding antibiotics. The results showed the antibiotics enhanced the nitrification rate of 15.8%-42% in vermicomposting maturated phage compared with the counterpart, with a better stimulating effect in the low concentration of tetracycline. The population of amoA genes increased in antibiotic treatments with low concentrations but decreased in these with high concentrations. In addition, high through-put sequencing results revealed that the tetracycline had a stronger influence on the α and β diversities of AOA and AOB, relative to the ofloxacin. In contrast to the AOB, the AOA played a more important role in ammonia oxidization, in the presence of antibiotics. This study suggests that the antibiotics of dewatered sludge can strongly affect the ammonia oxidization process through modifying the numbers and community structures of AOA and AOB during vermicomposting and these effects are associated with the types and concentrations of antibiotics.

The roles of free ammonia (FA) in biological wastewater treatment processes: A review

Free ammonia (FA) can pose inhibitory and/or biocidal effects on a variety of microorganisms involved in different biological wastewater treatment process, which is widely presented in wastewater treatment plants (WWTPs) due to the high levels of ammonium in the systems. This review article gives the up-to-date status on several essential roles of FA in biological wastewater treatment processes: the impacts of FA, mechanisms of FA roles, modeling of FA impacts, and implications of FA for wastewater treatment. Specifically, the impacts of FA on both wastewater and sludge treatment lines were firstly summarized, including nitrification, denitrification, anaerobic ammonium oxidation (Anammox), enhanced biological phosphorus removal and anaerobic processes. The involved mechanisms were then analyzed, which indicated FA inhibition can slow specific microbial activities or even reconfigure the microbial community structure, likely due to negative impacts of FA on intracellular pH, specific enzymes and extracellular polymeric substances (EPS), thus causing cell inactivation/lysis. Mathematical models describing the impact of FA on both wastewater and sludge treatment processes were also explored to facilitate process optimization. Finally, the key implications of FA were identified, that is FA can be leveraged to substantially enhance the biodegradability of secondary sludge, which would further improve biological nutrient removal and enhance renewable energy production.

Effects of biochar and dicyandiamide combination on nitrous oxide emissions from Camellia oleifera field soil

Greenhouse gas emissions from agricultural soils contribute substantially to global atmospheric composition. Nitrous oxide (N₂O) is one important greenhouse gas induces global warming. Nitrification inhibitors (NI) or biochar can be effective soil N₂O emission mitigation strategies for agricultural soils. However, due to differences in crop physiological traits or agricultural management, the effectiveness of mitigation strategies varies among agricultural systems. Camellia oleifera is a woody oil plant widely grown and requires intensive N input, which will potentially increase N₂O emissions. Thereby, mitigation of N₂O emissions from C. oleifera field soil is vital for sustainable C. oleifera development. Besides NI, incorporation of C. oleifera fruit shell-derived biochar into its soil will benefit waste management and simultaneous mitigation of N₂O emissions but this has not been investigated. Here, we conducted two studies to examine effects of biochar addition and NI (dicyandiamide, DCD) application on N₂O emissions from C. oleifera field soil with different N (urea or NH₄NO₃) and incubation temperatures. Biochar effects on nitrification rates varied among N treatments. Biochar applied in combination with DCD further reduced nitrification rates (for urea treatment, decreased from 1.1 to 0.3 mg kg^-1 day^-1). Biochar addition consistently increased soil N₂O emissions (for urea treatment, increased from 0.03 to 0.08 ng g^-1 h^-1) and their temperature sensitivity. DCD application reduced soil N₂O emissions with greater reductions with urea application. In future cultivation of intensively managed C. oleifera gardens, NI should be applied to mitigate N₂O emissions if biochar is added, especially when urea is used.

Nitrification inhibitor DMPSA mitigated N2O emission and promoted NO sink in rainfed wheat

Fertilized cropping systems are important sources of nitrous oxide (N₂O) and nitric oxide (NO) to the atmosphere, and biotic and abiotic processes control the production and consumption of these gases in the soil. In fact, the inhibition of nitrification after application of urea or an ammonium-based fertilizer to agricultural soils has resulted in an efficient strategy to mitigate both N₂O and NO in aerated agricultural soils. Therefore, the NO and N₂O mitigation capacity of a novel nitrification inhibitor (NI), 2-(3,4-dimethyl-1H-pyrazol-1-yl) succinic acid isomeric mixture (DMPSA), has been studied in a winter wheat crop. A high temporal resolution of fluxes of NO and NO₂, obtained by using automatic chambers for urea (U) and urea with DMPSA, allowed a better understanding of the temporal net emissions of these gases under field conditions. Seventy-five days after fertilization, the effective reduction of nitrification by DMPSA significantly decreased the production of NO with respect to the treatment without it, giving net consumption of NO in the soil (-61.72 g-N ha^-1) for U + DMPSA in comparison to net production (227.44 g-N ha^-1) for U. The explanation of NO deposition after NI application, due to biotic and abiotic processes in the soil-plant system, supposes a challenge that needs to be studied in the future. In the case of N₂O, the addition of DMPSA significantly mitigated the emissions of this gas by 71%, though the total N₂O emissions in both fertilized treatments were significantly greater than those of the control (43.69 g-N ha^-1). Regarding the fertilized treatments, no significant effect of DMPSA in comparison to urea alone was observed on grain yield nor bread-making wheat quality. To sum up, we got a significant reduction of N₂O and NO with the addition of DMPSA, without a loss in yield and quality parameters in wheat.

Research on the nitrogen transformation in rhizosphere of winter wheat (Triticum aestivum) under molybdenum addition

Molybdenum (Mo), an essential microelement for plants, animals, and microorganisms, is reported can reduce soil nitrogen (N) residues and regulate plant root growth, but little is known about its effect on soil N transformation in plant-root region. A specially designed rhizobox was used in the present study to investigate the N processes in rhizosphere and non-rhizosphere soils of winter wheat applied with different rates of Mo fertilizer. (1) In the rhizosphere soil, pH values increased with increasing rates of Mo application, nitrate (NO₃^--N) accumulated at the rates of 0.15 and 0.3 mg Mo kg^-1, potential denitrification activity (PDA) was significantly reduced by application of 0.15-1 mg Mo kg^-1, and the copy numbers of narG and nosZ genes were increased by application of 0.15-1 mg Mo kg^-1. (2) In the non-rhizosphere soil, NO₃^--N content decreased by application of 0.15-0.3 mg Mo kg^-1, and narG gene abundance increased obviously by application of 0.3-1 mg Mo kg^-1. (3) Soil pH, NO₃^--N, apparent nitrification rate (ANR), and nosZ gene abundance were significantly higher in rhizosphere than in non-rhizosphere soil. On the contrary, NH₄⁺-N and total N, PDA, the abundance of AOB, and nirK and nirS genes were significantly higher in non-rhizosphere soil. The results indicated that the N transformations in rhizosphere and non-rhizosphere soils were differently affected by soil application of Mo fertilizer, and rhizosphere played a more important role in soil N cycle processes. The regulatory effects of Mo on these processes were to increase plant biomass and N uptake, promote the NO₃^--N accumulation in rhizosphere soil, and weaken the denitrification in both rhizosphere and non-rhizosphere soils.

Heavy metals in slag affect inorganic N dynamics and soil bacterial community structure and function

Heavy metal contamination of soil in the vicinity of mining sites is a serious environmental problem around the world when mining residue (slag) is dispersed as dust. We conducted an incubation experiment to investigate the effect of a slag containing high levels of Pb and Zn (62.2 and 33.6 g kg^-1 slag as PbO and ZnO, respectively, sampled from a site formerly used as a lead and zinc mine) on the nitrogen cycle when mixed with soil (0-0.048 g slag g^-1 soil). The nitrogen cycle provides many life supporting-functions. To assess the quality of the soil in terms of the nitrogen cycle we focused on the dynamics of nitrate and ammonium, and bacterial community structure and functions within the soil. After two weeks of pre-incubation, ¹⁵N-labeled urea (500 mg N kg^-1) was added to the soil. Changes in soil pH, the concentration and ¹⁵N ratio of nitrate (NO₃^--N) and ammonium, and bacterial relative abundance and community structure were measured. Results indicated that increasing the ratio of slag to soil had a stronger negative effect on nitrification than ammonification, as suggested by slower nitrate accumulation rates as the slag:soil ratio increased. In the treatment with the highest amount of slag, the concentration of NO₃^--N was 50% of that in the controls at the end of the incubation. Regarding the bacterial community, Firmicutes had a positive and Planctomycetes a negative correlation with increasing slag concentration. Bacterial community functional analysis showed the proportion of bacterial DNA sequences related to nitrogen metabolism was depressed with increasing slag, from 0.68 to 0.65. We concluded that the slag impacted the soil bacterial community structure, and consequently influenced nitrogen dynamics. This study could form the basis of further investigation into the resistance of the nitrogen cycle to contamination in relation to soil bacterial community.

Effect of the nitrification inhibitor (3, 4-dimethylpyrazole phosphate) on the activities and abundances of ammonia-oxidizers and denitrifiers in a phenanthrene polluted and waterlogged soil

Through a 60-day microcosm incubation, the effect of 3, 4-dimethylpyrazole phosphate (DMPP) on the activities and abundances of ammonia-oxidizers and denitrifiers in phenanthrene-polluted soil was investigated. Five treatments were conducted for clean soil (CK), phenanthrene added (P), phenanthrene and DMPP added (PD), phenanthrene and urea added (PU), and phenanthrene, urea, and DMPP added (PUD) soils. The results indicate that the potential nitrification rate (PNR) in the P treatment was significantly higher than that in the PD treatment only on day 7, whereas the PNR in the PU treatment was significantly higher than that in the PUD treatment on each sampling day. The abundance of soil ammonia-oxidizing bacteria (AOB) in the PU treatment was significantly higher than that in the PUD treatment on each sampling day. Moreover, the abundance of AOB but rather than the ammonia-oxidizing archaea (AOA) had significantly positive correlation with soil PNR (P < 0.05). DMPP showed no obvious effect on the soil denitrification enzyme activity (DEA), which could have inhibited the abundances of denitrification-related narG, nirS, and nirK genes. The results of this study should provide a deeper understanding of the interaction between soil polycyclic aromatic hydrocarbons (PAH) contamination, ammonia oxidization, and denitrification, and offer valuable information for assessing the potential contribution of denitrification for soil PAH elimination.

Effects of nitrification inhibitors on gross N nitrification rate, ammonia oxidizers, and N2O production under different temperatures in two pasture soils

Australian pasture soil for cattle and sheep industries constitutes the principal land use with considerable N fertilizer consumption, which is one of the causes of local environmental problems. Nitrification plays a key role in regulating soil inorganic N concentration and its environmental diffusion. The effects of different nitrification inhibitors (NIs) on gross N nitrification (n_gross) rate and N₂O production under different temperatures in pasture soils remain unclear. A laboratory incubation experiment was conducted to determine the effect of NIs (dicyandiamide [DCD], 3,4-dimethylpyrazole phosphate [DMPP], and 3-methylpyrazol and 1H-1,2,4-triazol [3MP + TZ]) on N₂O emissions, n_gross and net N nitrification (n_net) rates, and the abundance of ammonia oxidizers, namely, ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB), in two Australian pasture soils incubated at temperatures of 15, 25, and 35 °C. All NIs reduced both n_gross and n_net rates and N₂O production rate from the two pasture soils but to different extents. The inhibitory rates of NIs on n_gross and n_net reached 6.80-63.8 and 5.91-62.3%, respectively, whereas that on N₂O production rate totaled 4.5-41.4% in the tested soils. NIs reduced nitrification and N₂O production by inhibiting the growth of AOB rather than AOA. The inhibitory effects of NIs were temperature-dependent, that is, decreasing with increasing temperature from 15 to 35 °C. In general, DMPP performed better than DCD and 3MP + TZ at 15 and 35 °C, whereas DCD performed more effectively than the other two NIs at 25 °C. Our results suggest that the utilization of NIs will depend on the conditions present, especially soil temperature. Additionally, AOB is the target of inhibition when mitigating nitrification and N₂O emission by applying NIs in pasture soils.

Roxarsone exposure jeopardizes nitrogen removal and regulates bacterial community in biological sequential batch reactors

Roxarsone is widely present in wastewaters of many animal farms in China. However, little is known about how long-term roxarsone exposure influences the nitrogen removal of biological wastewater treatment in agricultural settings. Here we investigated the nitrogen removal performance of a biological sequential batch reactor (SBR) and the changes of bacterial community, upon long-term roxarsone exposure. The long-term roxarsone dosing decreased the SBR nitrogen removal by 52.4%, with an immediate inhibition on denitrification and a delayed inhibition on nitrification. The analyses of bacterial enzymatic activities and 16 S rRNA sequencing revealed that bacterial activities generally decreased, and the nitrogen-cycling bacterial community was changed, particularly by the decrease (Acinetobacter and Methylophilaceae), persistence (Flavobacterium and Methylotenera), and emergence (Aeromonas) of certain bacterial genera. Overall, chronic roxarsone exposure could suppress nitrification and denitrification, which may even have broad implications on the use efficiency and cycling of nitrogen in agroecosystems.

Dicyandiamide has more inhibitory activities on nitrification than thiosulfate

Dicyandiamide (DCD) and thiosulfates are two type of nitrification inhibitors (NIs) that have been widely used in agriculture to improve nitrogen (N) fertilizer use efficiency and mitigate negative effect of N on environment. Little information is available concerning the comparison of the efficacy of DCD and thiosulfate on N transformations in soil. The aim of this study was to compare the effects of DCD and thiosulfate (K2S2O3) on changes of NH4+-N, nitrification inhibition and N recovery in a latosolic red soil. An incubation experiment was conducted with four treatments of control (CK), N, N+DCD, and N+K2S2O3. Soil samples were collected periodically over 50 d to determine concentrations of mineral N, and the amoA gene abundance of ammonia monooxygenase (AMO) for ammonia-oxidizing bacteria (AOB) was estimated by qPCR after 10 d incubation. In the N treatment, 67.8% of the applied N as NH4+-N disappeared from the mineral N pool and only 2.7% and 30.8% of the applied N was accumulated as NO2--N and NO3--N, respectively. Addition of DCD and thiosulfate to the soil prevented NH4+-N disappearance by 63.0% and 13.6%, respectively. DCD suppressed the production of NO2--N by 97.41%, whereas thiosulfate increased accumulation of NO2--N by 14.6%. Application of N along with DCD and thiosulfate inhibited nitrification, respectively, by 72.6% and 33.1%, resulting in the delay of the nitrification process for 30 days and 10 days, respectively. Apparent N recovery in N treatment was 66.2%, which increased by 55.2% and 4.8% by DCD and thiosulfate, respectively. Numbers of AOB amoA gene copy was significantly inhibited by both DCD and thiosulfate, and the stronger inhibition induced by DCD than thiosulfate was recorded. Results indicated that both DCD and thiosulfate were effective inhibitors for NH4+-N oxidation, NO3--N production, mineral N losses and AOB growth. DCD showed a more pronounced effect on nitrification inhibition than thiosulfate.

Acute Impact of Chlortetracycline on Nitrifying and Denitrifying Processes

  In the current study, sequential nitrification and anoxic experiments in synthetic municipal wastewater were exposed to 0.5 to 100 mg/L of chlortetracycline for 24 h to evaluate acute impact on the nitrification, and denitrification processes of biological treatment. Both processes were significantly (p < 0.05) inhibited at >50 mg/L of chlortetracycline, and the results revealed that nitrification was adversely affected by chlortetracycline compared with the anoxic process. In nitrification, chemical oxygen removal (COD) and ammonia oxidation kinetics were 50% inhibited at 10 mg chlortetracycline/L, and nitrite oxidation kinetics at 0.5 mg chlortetracycline/L. Likewise, in the anoxic process, 14 and 10 mg/L of chlortetracycline inhibited 50% of COD removal and nitrate reduction kinetics, respectively. In nitrification and denitrification, 90% of chlortetracycline was removed by adsorbing onto sludge suspended solids. In addition, a higher chlortetracycline concentration in anoxic effluent, compared with aerobic effluents, indicated a dissimilarity in the composition of sludge solids, pH, and biomass production for both processes.

Effects of metal oxide nanoparticles on nitrification in wastewater treatment systems: A systematic review

While the variety of engineered nanoparticles used in consumer products continues to grow, the use of metal oxide nanoparticles in electronics, textiles, cosmetics and food packaging industry has grown exponentially in recent years, which will inevitably result in their release into wastewater streams in turn impacting the important biological processes in wastewater treatment plants. Among these processes, nitrification play a critical role in nitrogen removal during wastewater treatment, however, it is sensitive to a wide range of inhibitory substances including metal oxide nanoparticles. Therefore, it is essential to systematically asses the effects of metal oxide nanoparticles on nitrification in biological wastewater treatment systems. In this review we discuss the present scenario of metal oxide nanoparticles and their impact on biological wastewater treatment processes, specifically nitrogen removal through nitrification. We also summarize the various methods used to measure nitrification inhibition by metal oxide nanoparticles and highlight corresponding results obtained using those methods. Finally, the key research gaps that need to be addressed in future are discussed.

Inhibitory effects of heavy metals and antibiotics on nitrifying bacterial activities in mature partial nitritation

To facilitate the use of partial nitritation (PN) in nitrogen removal processes for livestock wastewater, this work investigated the inhibitory effects of heavy metals and antibiotics on the nitrifying bacterial activities of the PN processes. Biomass was collected from a continuous-flow internal-loop airlift reactor and cultured with fixed ammonium concentrations of 921 mg N L^-1. Batch activity tests were conducted to determine the specific oxygen uptake rate. The individual and interactive inhibitory effects of Zn²⁺, Cu²⁺, oxytetracycline (OTC) and sulfamethazine (SMZ) were evaluated using an orthogonal test. The results showed that the half maximal inhibitory concentration (IC₅₀) values of Zn²⁺, Cu²⁺, OTC and SMZ on PN sludge were 50.1, 35.4, 447 and 1890 mg L^-1, respectively. The joint toxicities of heavy metals (Zn²⁺ and Cu²⁺) and antibiotics (OTC and SMZ) in the PN mixed culture were generally synergistic, except for between Zn²⁺ and Cu²⁺, which was antagonistic. In joint toxicity tests, the significance of the inhibitory effect of Zn²⁺ (15.3-164.3 mg L^-1), Cu²⁺ (13.8-90.9 mg L^-1), OTC (27.0-866.5 mg L^-1) and SMZ (290-3490 mg L^-1) on the nitrifying bacterial activity can be ranked in the following order: SMZ > Cu²⁺ > Zn²⁺ > OTC. Additionally, different exposure times (1 h, 3 h and 24 h) with or without aeration were also comparatively studied. These results show that a greater PN sludge activity loss than when exposure without aeration.

3,4-Dimethylpyrazole phosphate and 2-(N-3,4-dimethyl-1H-pyrazol-1-yl) succinic acid isomeric mixture nitrification inhibitors: Quantification in plant tissues and toxicity assays

Nitrification inhibitors are used to maintain ammonium available in the soil for longer periods while reducing nitrate leaching and N₂O emission. In this work we evaluated the potential toxicity effects of 3,4-dimethylpyrazole phosphate (DMPP) and 2-(N-3,4-dimethyl-1H-pyrazol-1-yl) succinic acid isomeric mixture (DMPSA) nitrification inhibitors. In order to determine the potential plant capacity to take up and translocate these inhibitors, we grew clover plants in hydroponic conditions and we developed a novel methodology for extracting DMPP and DMPSA that we quantified by HPLC. In addition, we also did toxicity bioassays: seed germination and Vibrio fischeri test. When clover was exposed to high amounts of nitrification inhibitors, plants accumulated DMPP, predominantly in leaves, and also DMPSA that preferentially accumulated in roots. These inhibitors did not provoke phytotoxicity at the equivalent of the maximum amount estimated in agriculture (0.5mg/kg soil). DMPP only provoked detrimental effects in plants at very high dose (100mg/kg soil). Interestingly, DMPSA was innocuous.

Effects of 1-octyl-3-methylimidazolium nitrate on the microbes in brown soil

The toxicity of ionic liquids (ILs) on soil organisms has aroused wide attention due to their high-solubility. The present investigation focused on the toxicity of 1-octyl-3-methylimidazolium nitrate ([C₈mim]NO₃) on the microbial populations (bacteria, fungi, and actinomycetes), soil enzyme (urease, dehydrogenase, acid phosphatase, and β-glucosidase) activities, microbial community diversity using terminal restriction fragment length polymorphism (T-RFLP), and abundance of the ammonia monooxygenase (amoA) genes of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) using quantitative real-time polymerase chain reaction (q-PCR) in brown soil at each trial with doses of 0, 1.0, 5.0, and 10.0mg/kg on days 10, 20, 30, and 40. The contents of [C₈mim]NO₃ in soil were measured using high performance liquid chromatography with recoveries of 84.3% to 85.2%, and changed less than 10% during the experimental period. A significant decrease was observed from the bacteria, fungi and actinomycetes populations at 10.0mg/kg, at which the urease activity was inhibited and the β-glucosidase activity was stimulated on days 20, 30, and 40. In addition, [C₈mim]NO₃ inhibited the dehydrogenase activity at 10mg/kg on days 30 and 40 and the acid phosphatase activity on day 20. The diversity of the soil microbial community and the gene abundance of AOA- and AOB- amoA were also inhibited. Furthermore, the present investigation provided more scientific information for the toxicity evaluation of ILs in soil.

Effects of silver-graphene oxide nanocomposites on soil microbial communities

Due to the application of silver-graphene oxide (Ag-GO) in diverse fields, it is important to investigate its potential impacts on the environment including soils. In this study, the response of microbial communities in soils treated with Ag-GO synthesized by glucose reduction was determined by analyzing enzyme activities, biomass, and inorganic N concentrations and by pyrosequencing. In soils treated with 0.1-1 mg Ag-GO g^-1 soil, the activities of β-glucosidase, cellobiohydrolase, and xylosidase decreased up to 80% and NO₃^- concentration decreased up to 82% indicating inhibited nitrification. Within the bacterial community, the relative abundance of Acidobacteria and Cyanobacteria in soils treated with Ag-GO were lower than that in control soil. Meanwhile, the relative abundance of AD3 and Firmicutes tended to increase under Ag-GO treatments. These changes in bacterial community composition reflected lowered activities associated with C and N cycling. On the other hand, microbial biomass showed no distinct change in response to Ag-GO treatment. Our study can serve as important basis in establishing guidelines for regulating the release of nanocomposites such as Ag-GO to the soil environment.

Microbial community response to silver nanoparticles and Ag+ in nitrifying activated sludge revealed by ion semiconductor sequencing

Silver nanoparticles (AgNPs), which are known to act as biocides, are incorporated into medical and consumer products including athletic clothing, stuffed animals, liquid dietary supplements, and more. The increasing use of AgNPs in these products is likely to lead to their entry into both natural and engineered systems, which has the potential to disrupt bacterial processes including those involved in nutrient cycling in wastewater treatment. In the present study, sequencing batch reactors (SBR) mimicking secondary wastewater treatment were operated to determine the effects of AgNPs on the microbial communities contained within activated sludge of wastewater treatment plants (WWTP). SBRs were treated with 0.2 and 2ppm of either gum Arabic (GA)-coated AgNPs, citrate (Ca)-coated AgNPs, or Ag⁺ as AgNO₃. Cell samples were collected and DNA isolated periodically throughout SBR operation. DNA was used for Ion Torrent Next Gen Sequencing of the V3 region of the 16S rDNA gene. Subsequent analyses revealed that the microbial community both shifted and recovered quickly in response to Ag⁺. Both AgNP treatments resulted in slower initial community shifts than that observed with the Ag⁺ treatment. GA-AgNPs elicited the longest lasting effect. Additional examination of nitrogen removal bacteria suggested the possibility of an increase in sludge bulking species with increased concentrations of AgNPs in WWTPs. This study supports the hypothesis that Ag⁺ release from AgNPs is largely coating-dependent and thus a key driver in dictating AgNP toxicity.

Comparison of the impacts of zinc ions and zinc nanoparticles on nitrifying microbial community

To understand the effects of metal ions and nanoparticles (NPs) on nitrifying bacterial communities, this study investigates the impacts of zinc (Zn) NPs, zinc oxide (ZnO) NPs and Zn ions on the nitrifying bacterial communities. Under low Zn concentration (0.1mgL^-1), the nitrification rate was promoted by Zn ions and inhibited by the two NPs, indicating that the toxicity of NPs was caused by the NPs themselves instead of the released Zn ions. Further analysis showed that both Zn NPs and ZnO NPs could result in substantial reactive oxygen species (ROS) production in the nitrifying bacteria community. The inhibition was strongly correlated with amoA gene expression, but not with the expression of hao and nxrA genes. These results indicated that the main difference of the Zn ions and Zn NPs on nitrifying bacterial community could be due to the different impacts on the ROS production and amoA gene expression. Collectively, the findings in this study advanced understanding of the different effects of Zn NPs, ZnO NPs and Zn ions on nitrifying bacteria.

Dimethyl pyrazol-based nitrification inhibitors effect on nitrifying and denitrifying bacteria to mitigate N2O emission

Nitrous oxide (N2O) emissions have been increasing as a result of intensive nitrogen (N) fertilisation. Soil nitrification and denitrification are the main sources of N2O, and the use of ammonium-based fertilisers combined with nitrification inhibitors (NIs) could be useful in mitigating N2O emissions from agricultural systems. In this work we looked at the N2O mitigation capacity of two dimethylpyrazol-based NIs, 3,4-dimethylpyrazole phosphate (DMPP) and 2-(N-3,4-dimethyl-1H-pyrazol-1-yl) succinic acid isomeric mixture (DMPSA), on soil nitrifying and denitrifying microbial populations under two contrasting soil water contents (40% and 80% soil water filled pore space; WFPS). Our results show that DMPP and DMPSA are equally efficient at reducing N2O emissions under 40% WFPS conditions by inhibiting bacterial ammonia oxidation. In contrast, at 80% WFPS DMPSA was less efficient than DMPP at reducing N2O emissions. Interestingly, at 80% WFPS, where lowered oxygen availability limits nitrification, both DMPP and DMPSA not only inhibited nitrification but also stimulated N2O reduction to molecular nitrogen (N2) via nitrous oxide reductase activity (Nos activity). Therefore, in this work we observed that DMP-based NIs stimulated the reduction of N2O to N2 by nitrous oxide reductase during the denitrification process.

Effect of Free Ammonia, Free Nitrous Acid, and Alkalinity on the Partial Nitrification of Pretreated Pig Slurry, Using an Alternating Oxic/Anoxic SBR

The effect of free ammonia (NH3 or FA), free nitrous acid (HNO2 or FNA), and total alkalinity (TA) on the performance of a partial nitrification (PN) sequencing batch reactor (SBR) treating anaerobically pretreated pig slurry was studied. The SBR was operated under alternating oxic/anoxic (O/A) conditions and was fed during anoxic phases. This strategy allowed using organic matter to partially remove nitrite (NO2-) and nitrate (NO3-) generated during oxic phases. The desired NH4+ to NO2- ratio of 1.3 g N/g N was obtained when an Ammonium Loading Rate (ALR) of 0.09 g NH4+-N/L·d was applied. The system was operated at a solid retention time (SRT) of 15-20 d and dissolved oxygen (DO) levels higher than 3 mg O2/L during the whole operational period. PN mainly occurred caused by the inhibitory effect of FNA on nitrite oxidizing bacteria (NOB). Once HNO2 concentration was negligible, NH4+ was fully oxidized to NO3- in spite of the presence of FA. The use of biomass acclimated to ammonium as inoculum avoided a possible effect of FA on NOB activity.

Challenges in using allylthiourea and chlorate as specific nitrification inhibitors

Allylthiourea (ATU) and chlorate (ClO₃^-) are often used to selectively inhibit nitritation and nitratation. In this work we identified challenges with use of these compounds in inhibitory assays with filter material from a biological rapid sand filter for groundwater treatment. Inhibition was investigated in continuous-flow lab-scale columns, packed with filter material from a full-scale filter and supplied with NH₄⁺ or NO₂^-. ATU concentrations of 0.1-0.5 mM interfered with the indophenol blue method for NH₄⁺ quantification leading to underestimation of the measured NH₄⁺ concentration. Interference was stronger at higher ATU levels and resulted in no NH₄⁺ detection at 0.5 mM ATU. ClO₃^- at typical concentrations for inhibition assays (1-10 mM) inhibited nitratation by less than 6%, while nitritation was instead inhibited by 91% when NH₄⁺ was supplied. On the other hand, nitratation was inhibited by 67-71% at 10-20 mM ClO₃^- when NO₂^- was supplied, suggesting significant nitratation inhibition at higher NO₂^- concentrations. No chlorite (ClO₂^-) was detected in the effluent, and thus we could not confirm that nitritation inhibition was caused by ClO₃^- reduction to ClO₂^-. In conclusion, ATU and ClO₃^- should be used with caution in inhibition assays, because analytical interference and poor selectivity for the targeted process may affect the experimental outcome and compromise result interpretation.

Effects of graphite nanoparticles on nitrification in an activated sludge system

Graphite nanoparticles (GNPs) might result in unexpected effects during their transportation and transformation in wastewater treatment systems, including strong thermo-catalytic and catalytic effects and microbial cytotoxicity. In particular, the effects of GNPs on the nitrification process in activated sludge systems should be addressed. This study aimed to estimate the influence of GNPs on the nitrification process in a short-term nitrification reactor with exposure to different light sources. The results indicated that GNPs could only improve the efficiency of photothermal transformation slightly in the activated sludge system because of its photothermal effects under the standard illuminant (imitating 1 × sun). However, even with better photothermal effects, the nitrification efficiency still decreased significantly with GNP dosing under the standard illuminant, which might result from stronger cytotoxic effects of GNPs on the nitrifying bacteria. The disappearance of extracellular polymeric substances (EPS) around bacterial cells was observed, and the total quantity of viable bacteria decreased significantly after GNP exposuring. Variation in bacterial groups primarily occurred in nitrifying microbial communities, including Nitrosomonas sp., Nitrosospira sp., Comamonas sp. and Bradyrhizobiace sp. Nitrifiers significantly decreased, while the phyla Gammaproteobacteria, Deinocccus, and Bacteroidetes exhibited greater stability during GNP treatment.

Challenges in using allylthiourea and chlorate as specific nitrification inhibitors

Allylthiourea (ATU) and chlorate (ClO₃^-) are often used to selectively inhibit nitritation and nitratation. In this work we identified challenges with use of these compounds in inhibitory assays with filter material from a biological rapid sand filter for groundwater treatment. Inhibition was investigated in continuous-flow lab-scale columns, packed with filter material from a full-scale filter and supplied with NH₄⁺ or NO₂^-. ATU concentrations of 0.1-0.5 mM interfered with the indophenol blue method for NH₄⁺ quantification leading to underestimation of the measured NH₄⁺ concentration. Interference was stronger at higher ATU levels and resulted in no NH₄⁺ detection at 0.5 mM ATU. ClO₃^- at typical concentrations for inhibition assays (1-10 mM) inhibited nitratation by less than 6%, while nitritation was instead inhibited by 91% when NH₄⁺ was supplied. On the other hand, nitratation was inhibited by 67-71% at 10-20 mM ClO₃^- when NO₂^- was supplied, suggesting significant nitratation inhibition at higher NO₂^- concentrations. No chlorite (ClO₂^-) was detected in the effluent, and thus we could not confirm that nitritation inhibition was caused by ClO₃^- reduction to ClO₂^-. In conclusion, ATU and ClO₃^- should be used with caution in inhibition assays, because analytical interference and poor selectivity for the targeted process may affect the experimental outcome and compromise result interpretation.

Inhibitory effect of thiourea on biological nitrification process and its eliminating method

Thiourea is a typical nitrification inhibitor that shows a strong inhibitory effect against the biological nitrification process. The 50% inhibitory concentration (IC₅₀) of thiourea on nitrification was determined to be 0.088 mg g VSS^-1, and nitrifiers recovered from the thiourea inhibition after it was completely degraded. The thiourea-degrading ability of the sludge system was improved to 3.06 mg gVSS^-1 h^-1 through cultivation of thiourea-degrading bacteria by stepwise increasing the influent thiourea concentration. The dominant thiourea-degrading bacteria strain that used thiourea as the sole carbon and nitrogen source in the sludge system was identified as Pseudomonas sp. NCIMB. The results of this study will facilitate further research of the biodegradation characteristics of thiourea and similar pollutants.

Potential effects of rainwater-borne hydrogen peroxide on pollutants in stagnant water environments

Microcosm experiments were conducted to examine the effects of rainwater-borne H₂O₂ on inactivation of water-borne coliforms, oxidation of ammonia and nitrite, and degradation of organic pollutants in canal and urban lake water. The results show that the soluble iron in the investigated water samples was sufficiently effective for reaction with H₂O₂ in the simulated rainwater-affected stagnant water to produce OH (Fenton reaction), which inactivated coliform bacteria even at a H₂O₂ dose as low as 5 μM within just 1 min of contact time. Coliform inhibition could last for at least 1 h and repeated input of H₂O₂ at a 30 min interval allowed maintenance of microbial inhibition for at least 3 h. Nitrification was also impeded by the Fenton process. The resulting inhibition of ammonia-oxidizing microbes reduced the removal rate of NH₄⁺ and the emission of gaseous N species. In the presence of H₂O₂ at a dose of 20 μM, Fenton-driven chemical oxidation appeared to outplay the impediment of biodegradation caused by inhibited microbial activities in terms of removing total polycyclic aromatic hydrocarbons from the water column. The findings point to a potential research direction that may help to explain the dynamics of water-borne pollutants in ambient water environments.

The effect of chronic silver nanoparticles on aquatic system in microcosms

Silver nanoparticles (AgNPs) inevitably discharge into aquatic environments due to their abundant use in antibacterial products. It was reported that in laboratory conditions, AgNPs display dose-dependent toxicity to aquatic organisms, such as bacteria, algae, macrophytes, snails and fishes. However, AgNPs could behave differently in natural complex environments. In the present study, a series of microcosms were established to investigate the distribution and toxicity of AgNPs at approximately 500 μg L^-1 in aquatic systems. As a comparison, the distribution and toxicity of the same concentration of AgNO₃ were also determined. The results showed that the surface layer of sediment was the main sink of Ag element for both AgNPs and AgNO₃. Both aquatic plant (Hydrilla verticillata) and animals (Gambusia affinis and Radix spp) significantly accumulated Ag. With short-term treatment, phytoplankton biomass was affected by AgNO₃ but not by AgNPs. Chlorophyll content of H. verticillata increased with both AgNPs and AgNO₃ short-term exposure. However, the biomass of phytoplankton, aquatic plant and animals was not significantly different between control and samples treated with AgNPs or AgNO₃ for 90 d. The communities, diversity and richness of microbes were not significantly affected by AgNPs and AgNO₃; in contrast, the nitrification rate and its related microbe (Nitrospira) abundance significantly decreased. AgNPs and AgNO₃ may affect the nitrogen cycle and affect the environment and, since they might be also transferred to food web, they represent a risk for health.

Short-term and long-term effects of Zn (II) on the microbial activity and sludge property of partial nitrification process

Autotrophic nitrogen removal was an innovative and economical nitrogen removal technology with less oxygen and no organics consumption, in which partial nitrification (PN) is the key component. It is necessary to clear the impact of metal ions on PN since the development of industry increased their opportunity for entering into wastewater. In this study, PN process was successfully started-up in an SBR, the short-term and long-term effects of Zn (II) on microbial bioactivity and the sludge adsorption ability for Zn (II) were investigated. Results suggested that low Zn (II) were favorable for AOB bioactivity, while the long-term effect also induced NOB bioactivity. The suppression threshold of Zn (II) on AOB in short-term effect was 10mgL^-1, which rose to 50mgL^-1 in the long-term effect due to the self-adaption. The PN sludge presented prominent absorbability for zinc and performed a quadratic relation with the Zn (II) concentration.

Influence of imazethapyr and quizalofop-p-ethyl application on microbial biomass and enzymatic activity in peanut grown soil

A field experiment was conducted to examine the degradation and impact of two post-emergence herbicides (imazethapyr and quizalofop-p-ethyl) on soil ecosystems at a half recommended rate (HRE), recommended rate (RE), and double recommended rate (DRE) during kharif peanut cultivation. Herbicides were innocuous to soil microbial activity at HRE, however, showed some significant influences at RE and DRE, and exerted temporary toxic effects on microbial biomass carbon and fluorescein diacetate hydrolyzing activity. Dehydrogenase activity also declined for a shorter period except imazethapyr application at DRE. Acid phosphatase activity was inhibited whereas alkaline phosphatase activity fluctuated between promotion and inhibition, but promotion was predominant suggesting a direct role of alkaline soil environment. Soil NH₄⁺ and NO₃^- nitrogen were increased by the herbicides at initial (after 7 days) and last phases (after 30 days), respectively. After an early period of inhibition, urease activity returned to the control level after 30 days. Dissipation of imazethapyr residues fitted best to bi-exponential order rate kinetics at DRE and RE, whereas it followed first-order rate kinetics at HRE. The residues of quizalofop-p-ethyl were found only up to 1 day after application suggesting its rapid conversion to active acid metabolites. Both the herbicides had transient harmful effects on most of the soil microbiological parameters.

Fabrication of Bacteria Environment Cubes with Dry Lift-Off Fabrication Process for Enhanced Nitrification

We have developed a 3D dry lift-off process to localize multiple types of nitrifying bacteria in polyethylene glycol diacrylate (PEGDA) cubes for enhanced nitrification, a two-step biological process that converts ammonium to nitrite and then to nitrate. Ammonia-oxidizing bacteria (AOB) is responsible for converting ammonia into nitrite, and nitrite-oxidizing bacteria (NOB) is responsible for converting nitrite to nitrate. Successful nitrification is often challenging to accomplish, in part because AOB and NOB are slow growers and highly susceptible to many organic and inorganic chemicals in wastewater. Most importantly, the transportation of chemicals among scattered bacteria is extremely inefficient and can be problematic. For example, nitrite, produced from ammonia oxidation, is toxic to AOB and can lead to the failure of nitrification. To address these challenges, we closely localize AOB and NOB in PEGDA cubes as microenvironment modules to promote synergetic interactions. The AOB is first localized in the vicinity of the surface of the PEGDA cubes that enable AOB to efficiently uptake ammonia from a liquid medium and convert it into nitrite. The produced nitrite is then efficiently transported to the NOB localized at the center of the PEGDA particle and converted into non-toxic nitrate. Additionally, the nanoscale PEGDA fibrous structures offer a protective environment for these strains, defending them from sudden toxic chemical shocks and immobilize in cubes. This engineered microenvironment cube significantly enhances nitrification and improves the overall ammonia removal rate per single AOB cell. This approach—encapsulation of multiple strains at close range in cube in order to control their interactions—not only offers a new strategy for enhancing nitrification, but also can be adapted to improve the production of fermentation products and biofuel, because microbial processes require synergetic reactions among multiple species.