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Zhu J, Wu D, Huang X, Chen D, Nie Z. Hydrogen-bond disruption in molecularly engineered Janus evaporators for enhanced solar desalination. SOFT MATTER 2025. [PMID: 39973339 DOI: 10.1039/d4sm01484g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/21/2025]
Abstract
Hydrogels have emerged as effective evaporator platforms, significantly enhancing evaporation rates by disrupting water's hydrogen bond network. Here, we present an advanced strategy to improve hydrogel evaporation performance by tailoring alkyl hydrophobic groups within biparental polyelectrolyte-shell micelles grafted onto the polyvinyl alcohol (PVA) hydrogel surface. Poly(2-(diethylamino)ethyl methacrylate) (PDEAEMA) quaternized with methyl iodide (MeI) or ethyl iodide (EtI) formed the biparental polyelectrolyte shell, while poly(benzyl methacrylate) (PBzMA) constituted the micelle core, creating BE-MeI and BE-EtI micelles, respectively. The molecularly engineered BE-MeI micelles exhibited an optimized configuration of quaternary amines linked to hydrophobic groups, achieving a synergistic balance between water attraction via electrostatic interactions and water repulsion via steric hindrance. This configuration effectively disrupted the water's hydrogen bond network, lowering the water evaporation enthalpy to 1434 J g-1. The BE-MeI micelle-grafted PVA hydrogel achieved a record-breaking evaporation rate of 4.1 kg m-2 h-1 under 1 sun irradiation, surpassing prior benchmarks, including our previously reported poly(4-vinyl pyridine) quaternized by a MeI system. Additionally, the grafted micelle layer exhibited a salt rejection ratio of 99.62%, ensuring excellent desalination performance. The biparental polyelectrolyte-shell micelle grafting strategy is broadly applicable across diverse hydrogel systems, representing a significant advancement in solar-driven desalination technology.
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Affiliation(s)
- Jie Zhu
- The State Key Laboratory of Molecular Engineering of Polymers and Department of Macromolecular Science, Fudan University, Shanghai, 200438, People's Republic of China.
| | - Dong Wu
- The State Key Laboratory of Molecular Engineering of Polymers and Department of Macromolecular Science, Fudan University, Shanghai, 200438, People's Republic of China.
| | - Xiayun Huang
- The State Key Laboratory of Molecular Engineering of Polymers and Department of Macromolecular Science, Fudan University, Shanghai, 200438, People's Republic of China.
| | - Daoyong Chen
- The State Key Laboratory of Molecular Engineering of Polymers and Department of Macromolecular Science, Fudan University, Shanghai, 200438, People's Republic of China.
- The Key Laboratory of Functional Molecular Solids, Ministry of Education, and Department of Materials Chemistry, School of Chemistry and Materials Science, Anhui Normal University, Wuhu, Anhui, 214002, People's Republic of China
| | - Zhihong Nie
- The State Key Laboratory of Molecular Engineering of Polymers and Department of Macromolecular Science, Fudan University, Shanghai, 200438, People's Republic of China.
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2
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Wei M, Zuo J, Tian G, Hua W. Simulating temperature and tautomeric effects for vibrationally resolved XPS of biomolecules: Combining time-dependent and time-independent approaches to fingerprint carbonyl groups. J Chem Phys 2024; 161:104303. [PMID: 39248239 DOI: 10.1063/5.0224090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2024] [Accepted: 08/22/2024] [Indexed: 09/10/2024] Open
Abstract
Carbonyl groups (C=O) play crucial roles in the photophysics and photochemistry of biological systems. O1s x-ray photoelectron spectroscopy allows for targeted investigation of the C=O group, and the coupling between C=O vibration and O1s ionization is reflected in the fine structures. To elucidate its characteristic vibronic features, systematic Franck-Condon simulations were conducted for six common biomolecules, including three purines (xanthine, caffeine, and hypoxanthine) and three pyrimidines (thymine, 5F-uracil, and uracil). The complexity of simulation for these biomolecules lies in accounting for temperature effects and potential tautomeric variations. We combined the time-dependent and time-independent methods to efficiently account for the temperature effects and to provide explicit assignments, respectively. For hypoxanthine, the tautomeric effect was considered by incorporating the Boltzmann population ratios of two tautomers. The simulations demonstrated good agreement with experimental spectra, enabling differentiation of two types of carbonyl oxygens with subtle local structural differences, positioned between two nitrogens (O1) or between one carbon and one nitrogen (O2). The analysis provided insights into the coupling between C=O vibration and O1s ionization, consistently showing an elongation of the C=O bond length (by 0.08-0.09 Å) upon O1s ionization.
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Affiliation(s)
- Minrui Wei
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, Department of Applied Physics, School of Physics, Nanjing University of Science and Technology, 210094 Nanjing, China
| | - Junxiang Zuo
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, Department of Applied Physics, School of Physics, Nanjing University of Science and Technology, 210094 Nanjing, China
| | - Guangjun Tian
- Key Laboratory for Microstructural Material Physics of Hebei Province, School of Science, Yanshan University, Qinhuangdao 066004, China
| | - Weijie Hua
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, Department of Applied Physics, School of Physics, Nanjing University of Science and Technology, 210094 Nanjing, China
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3
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Ge G, Zhang JR, Wang SY, Wei M, Ji Y, Duan S, Ueda K, Hua W. Mapping Hydrogen Positions along the Proton Transfer Pathway in an Organic Crystal by Computational X-ray Spectra. J Phys Chem Lett 2024; 15:6051-6061. [PMID: 38819966 DOI: 10.1021/acs.jpclett.4c01133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2024]
Abstract
Understanding proton transfer (PT) dynamics in condensed phases is crucial in chemistry. We computed a 2D map of N 1s X-ray photoelectron/absorption spectroscopy (XPS/XAS) for an organic donor-acceptor salt crystal against two varying N-H distances to track proton motions. Our results provide a continuous spectroscopic mapping of O-H···N↔O-··· H+-N processes via hydrogen bonds at both nitrogens, demonstrating the sensitivity of N 1s transient XPS/XAS to hydrogen positions and PT. By reducing the O-H length at N1 by only 0.2 Å, we achieved excellent theory-experiment agreement in both XPS and XAS. Our study highlights the challenge in refining proton positions in experimental crystal structures by periodic geometry optimizations and proposes an alternative scaled snapshot protocol as a more effective approach. This work provides valuable insights into X-ray spectra for correlated PT dynamics in complex crystals, benefiting future experimental studies.
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Affiliation(s)
- Guoyan Ge
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, School of Physics, Nanjing University of Science and Technology, 210094 Nanjing, China
| | - Jun-Rong Zhang
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, School of Physics, Nanjing University of Science and Technology, 210094 Nanjing, China
| | - Sheng-Yu Wang
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, School of Physics, Nanjing University of Science and Technology, 210094 Nanjing, China
| | - Minrui Wei
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, School of Physics, Nanjing University of Science and Technology, 210094 Nanjing, China
| | - Yongfei Ji
- School of Chemistry and Chemical Engineering, Guangzhou University, Guangzhou, Guangdong 510006, China
| | - Sai Duan
- Collaborative Innovation Center of Chemistry for Energy Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Key Laboratory of Computational Physical Sciences, Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Kiyoshi Ueda
- School of Physical Science and Technology, ShanghaiTech University, Shanghai 201210, China
- Department of Chemistry, Tohoku University, Sendai 980-8578, Japan
| | - Weijie Hua
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, School of Physics, Nanjing University of Science and Technology, 210094 Nanjing, China
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Chen J, Huang H, Gong W, Chen Y, Dong R, Ren L, Qiu T. Fine-Tuning Electron-Donor Capability in the Basic Anion of Poly(ionic liquid) Frameworks for Revolutionizing Catalytic Synthesis of Ethyl Methyl Carbonate with Both Ultrahigh Catalytic Activity and Selectivity. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:9233-9243. [PMID: 38623907 DOI: 10.1021/acs.langmuir.4c00650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/17/2024]
Abstract
Ethyl methyl carbonate (EMC) is a crucial solvent extensively utilized in lithium-ion battery electrolytes; the transesterification of dimethyl carbonate (DMC) with ethanol is a pivotal reaction for EMC production. However, this reaction faces challenges due to the trade-off between catalytic activity and selectivity from the basic catalysts. In this issue, we report an innovative strategy through fine-tuning the electron-donor capability of the basic phenolate anion ([PhO]) in a novel poly(ionic liquid) (PIL) framework, as synthesized via an alkylation reaction between 1,3,5-tris(bromomethyl)benzene, biphenyldiimidazole, and N,N'-carbonyldiimidazole (CDI) to trigger targeted basicity that can directionally catalyze the transesterification of DMC with ethanol, so as to achieve both ultrahigh catalytic activity and selectivity toward EMC. By varying the substituent groups with electron-withdrawing and electron-donating effects on the phenolate anion, the PILs show expected changes in the catalytic performance, following well with the trend of charge density on these substituted phenolate anions. The optimized catalyst [CPIL-CDI][MeOPhO], induced by p-methoxyphenolate anions, allows an extraordinary EMC yield of 72.19% and an EMC selectivity of 91.48% under mild conditions without any process intensifications, suppressing all of the reported catalysts reported to date. Outcomes and approaches shown in this work have the potential to expedite the systematic design of cations and anions within PILs for industrial-scale EMC production through environmentally friendly transesterification processes.
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Affiliation(s)
- Jie Chen
- Engineering Research Center of Reactive Distillation, Fujian Province University, College of Chemical Engineering, Fuzhou University, Fuzhou 350108, Fujian, China
- Qingyuan Innovation Laboratory, Quanzhou 362801, Fujian, China
| | - Huiyao Huang
- Engineering Research Center of Reactive Distillation, Fujian Province University, College of Chemical Engineering, Fuzhou University, Fuzhou 350108, Fujian, China
- Qingyuan Innovation Laboratory, Quanzhou 362801, Fujian, China
| | - Wangquan Gong
- Engineering Research Center of Reactive Distillation, Fujian Province University, College of Chemical Engineering, Fuzhou University, Fuzhou 350108, Fujian, China
| | - Yi Chen
- Engineering Research Center of Reactive Distillation, Fujian Province University, College of Chemical Engineering, Fuzhou University, Fuzhou 350108, Fujian, China
| | - Rong Dong
- College of Environment & Safety Engineering, Fuzhou University, Fuzhou 350108, Fujian, China
| | - Limei Ren
- Department of Chemical Engineering, Shijiazhuang University, Hebei 050035, China
| | - Ting Qiu
- Engineering Research Center of Reactive Distillation, Fujian Province University, College of Chemical Engineering, Fuzhou University, Fuzhou 350108, Fujian, China
- Qingyuan Innovation Laboratory, Quanzhou 362801, Fujian, China
- Fuzhou University International Joint Laboratory of Thermochemical Conversion of Biomass, Fuzhou University, Fuzhou 350108, Fujian, China
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Du Y, Jie G, Jia H, Liu J, Wu J, Fu Y, Zhang F, Zhu W, Fan M. Visible-light-induced photocatalytic CO 2 reduction over zirconium metal organic frameworks modified with different functional groups. J Environ Sci (China) 2023; 132:22-30. [PMID: 37336607 DOI: 10.1016/j.jes.2022.10.037] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Revised: 10/21/2022] [Accepted: 10/21/2022] [Indexed: 06/21/2023]
Abstract
The reduction of CO2 into high value-added chemicals and fuels by a photocatalytic technology can relieve energy shortages and the environmental problems caused by greenhouse effects. In the current work, an amino-functionalized zirconium metal organic framework (Zr-MOF) was covalently modified with different functional groups via the condensation of Zr-MOF with 2-pyridinecarboxaldehyde (PA), salicylaldehyde (SA), benzaldehyde (BA), and trifluoroacetic acid (TA), named Zr-MOF-X (X = PA, SA, BA, and TA), respectively, through the post-synthesis modification. Compared with Zr-MOF and Zr-MOF-TA, the introduction of PA, SA, or BA into the framework of Zr-MOF can not only enhance the visible-light harvesting and CO2 capture, but also accelerate the photogenerated charge separation and transfer, thereby improving the photocatalytic ability of Zr-MOF for CO2 reduction. These results indicate that the modification of Zr-MOF with electron-donating groups can promote the photocatalytic CO2 reduction. Therefore, the current work provides an instructive approach to improve the photocatalytic efficiency of CO2 reduction through the covalent modification of MOFs.
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Affiliation(s)
- Yuexian Du
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua 321004, China
| | - Guang'an Jie
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua 321004, China
| | - Huilin Jia
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua 321004, China
| | - Jiahui Liu
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua 321004, China
| | - Jieyu Wu
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua 321004, China
| | - Yanghe Fu
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua 321004, China; Zhejiang Engineering Laboratory for Green Syntheses and Applications of Fluorine-Containing Specialty Chemicals, Institute of Advanced Fluorine-Containing Materials, Zhejiang Normal University, Jinhua 321004, China.
| | - Fumin Zhang
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua 321004, China; Zhejiang Engineering Laboratory for Green Syntheses and Applications of Fluorine-Containing Specialty Chemicals, Institute of Advanced Fluorine-Containing Materials, Zhejiang Normal University, Jinhua 321004, China
| | - Weidong Zhu
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua 321004, China; Zhejiang Engineering Laboratory for Green Syntheses and Applications of Fluorine-Containing Specialty Chemicals, Institute of Advanced Fluorine-Containing Materials, Zhejiang Normal University, Jinhua 321004, China.
| | - Maohong Fan
- Department of Chemical and Petroleum Engineering, University of Wyoming, Laramie, WY 82071, USA.
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Yang Z, Pink M, Nowik-Boltyk EM, Lu S, Junghoefer T, Rajca S, Stoll S, Casu MB, Rajca A. Thermally Ultrarobust S = 1/2 Tetrazolinyl Radicals: Synthesis, Electronic Structure, Magnetism, and Nanoneedle Assemblies on Silicon Surface. J Am Chem Soc 2023; 145:13335-13346. [PMID: 37285418 PMCID: PMC10438971 DOI: 10.1021/jacs.3c03402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Open-shell organic molecules, including S = 1/2 radicals, may provide enhanced properties for several emerging technologies; however, relatively few synthesized to date possess robust thermal stability and processability. We report the synthesis of S = 1/2 biphenylene-fused tetrazolinyl radicals 1 and 2. Both radicals possess near-perfect planar structures based on their X-ray structures and density-functional theory (DFT) computations. Radical 1 possesses outstanding thermal stability as indicated by the onset of decomposition at 269 °C, based on thermogravimetric analysis (TGA) data. Both radicals possess very low oxidation potentials <0 V (vs. SCE) and their electrochemical energy gaps, Ecell ≈ 0.9 eV, are rather low. Magnetic properties of polycrystalline 1 are characterized by superconducting quantum interference device (SQUID) magnetometry revealing a one-dimensional S = 1/2 antiferromagnetic Heisenberg chain with exchange coupling constant J'/k ≈ -22.0 K. Radical 1 in toluene glass possesses a long electron spin coherence time, Tm ≈ 7 μs in the 40-80 K temperature range, a property advantageous for potential applications as a molecular spin qubit. Radical 1 is evaporated under ultrahigh vacuum (UHV) forming assemblies of intact radicals on a silicon substrate, as confirmed by high-resolution X-ray photoelectron spectroscopy (XPS). Scanning electron microscope (SEM) images indicate that the radical molecules form nanoneedles on the substrate. The nanoneedles are stable for at least 64 hours under air as monitored by using X-ray photoelectron spectroscopy. Electron paramagnetic resonance (EPR) studies of the thicker assemblies, prepared by UHV evaporation, indicate radical decay according to first-order kinetics with a long half-life of 50 ± 4 days at ambient conditions.
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Affiliation(s)
- Zhimin Yang
- Department of Chemistry, University of Nebraska, Lincoln, Nebraska 68588-0304, USA
| | - Maren Pink
- IUMSC, Department of Chemistry, Indiana University, Bloomington, Indiana 47405-7102, USA
| | | | - Shutian Lu
- Department of Chemistry, University of Washington, Seattle, Washington 98195, USA
| | - Tobias Junghoefer
- Institute of Physical and Theoretical Chemistry, University of Tübingen, 72076 Tübingen, Germany
| | - Suchada Rajca
- Department of Chemistry, University of Nebraska, Lincoln, Nebraska 68588-0304, USA
| | - Stefan Stoll
- Department of Chemistry, University of Washington, Seattle, Washington 98195, USA
| | - Maria Benedetta Casu
- Institute of Physical and Theoretical Chemistry, University of Tübingen, 72076 Tübingen, Germany
| | - Andrzej Rajca
- Department of Chemistry, University of Nebraska, Lincoln, Nebraska 68588-0304, USA
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7
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Xiong R, Xu L, Tang Y, Cao M, Li H. Identifying the protonation site and the scope of non-proline cis-peptide bond conformations: a first-principles study on protonated oligopeptides. Phys Chem Chem Phys 2023; 25:13989-13998. [PMID: 37194311 DOI: 10.1039/d3cp00690e] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
The existence of non-proline cis-peptide bond conformations of protonated triglycine proposed by us has been verified through a recent IR-IR double resonance experiment. However, the scope of such unique structures in protonated oligopeptides and whether protonation at amide oxygen is more stable than that at traditional amino nitrogen remain unsolved. In this study, the most stable conformers of a series of protonated oligopeptides were fully searched. Our findings reveal that the special cis-peptide bond structure appears with high energies for diglycine and is energetically less favored for tetra- and pentapeptides, while it acts as the global minimum only for tripeptides. To explore the formation mechanism of the cis-peptide bond, electrostatic potential analysis, and intramolecular interactions were analyzed. Advanced theoretical calculations confirmed that amino nitrogen is still preferred as the protonated site in most cases except glycylalanylglycine(GAG). The energy difference between the two protonated isomers of GAG is only 0.03 kcal mol-1, indicating that the tripeptide is most likely to be protonated on the amide oxygen first. We also conducted chemical (infrared (IR)) and electronic (X-ray photoelectron spectra (XPS) and near-edge X-ray absorption fine structure spectra (NEXAFS)) structure calculations of these peptides to identify their notable differences unambiguously. This study thus provides valuable information for exploring the scope of cis-peptide bond conformation and the competition between two different protonated ways.
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Affiliation(s)
- Rui Xiong
- Institutes of Physical Science and Information Technology, Key Laboratory of Structure and Functional Regulation of Hybrid Materials, Ministry of Education, Anhui Graphene Engineering Laboratory, Anhui University, Hefei, Anhui, 230601, China.
| | - Li Xu
- Institutes of Physical Science and Information Technology, Key Laboratory of Structure and Functional Regulation of Hybrid Materials, Ministry of Education, Anhui Graphene Engineering Laboratory, Anhui University, Hefei, Anhui, 230601, China.
| | - Yong Tang
- Institutes of Physical Science and Information Technology, Key Laboratory of Structure and Functional Regulation of Hybrid Materials, Ministry of Education, Anhui Graphene Engineering Laboratory, Anhui University, Hefei, Anhui, 230601, China.
| | - Mengge Cao
- Institutes of Physical Science and Information Technology, Key Laboratory of Structure and Functional Regulation of Hybrid Materials, Ministry of Education, Anhui Graphene Engineering Laboratory, Anhui University, Hefei, Anhui, 230601, China.
| | - Hongbao Li
- Institutes of Physical Science and Information Technology, Key Laboratory of Structure and Functional Regulation of Hybrid Materials, Ministry of Education, Anhui Graphene Engineering Laboratory, Anhui University, Hefei, Anhui, 230601, China.
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Nitrogen-rich cobalt (II) MOFs as efficient bifunctional catalysts for single or tandem oxidation and CO2 conversion reactions. J CO2 UTIL 2023. [DOI: 10.1016/j.jcou.2022.102298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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9
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Cheng X, Wei M, Tian G, Luo Y, Hua W. Vibrationally-Resolved X-ray Photoelectron Spectra of Six Polycyclic Aromatic Hydrocarbons from First-Principles Simulations. J Phys Chem A 2022; 126:5582-5593. [PMID: 35959595 DOI: 10.1021/acs.jpca.2c04426] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Vibrationally resolved C 1s X-ray photoelectron spectra (XPS) of a series of six polycyclic aromatic hydrocarbons (PAHs; phenanthrene, coronene, naphthalene, anthracene, tetracene, and pentacene) were computed by combining the full core hole density functional theory and the Franck-Condon simulations with the inclusion of the Duschinsky rotation effect. Simulated spectra of phenanthrene, coronene, and naphthalene agree well with experiments both in core binding energies (BEs) and profiles, which validate the accuracy of our predictions for the rest molecules with no high-resolution experiments. We found that three types of carbons i (inner C), p (peripheral C bonded to three C atoms), and h (peripheral C bonded to an H atom) show decreasing BEs. In linear PAHs (the latter four), h-type carbons further split into h1 or h2 (on inner or edge benzene ring) subtypes with chemical shifts of ca. 0.2-0.4 eV. All major Franck-Condon-active modes are characterized to be in-plane vibrations: low-frequency (<800 cm-1) C-C ring deformation modes play an essential role in determining the peak asymmetries; and for each h-type carbon a high-frequency (ca. 3600 cm-1) C*-H stretching mode is responsible for the high-energy tail. We found that core ionization leads to reduction of all C*-C and C*-H bond lengths and ring deformation with a definite direction. Based on theoretical spectra of four linear PAHs, we found asymptotic relations and anticipated possible spectral features for even larger linear PAHs. Our calculations provide accurate reference spectra for XPS characterizations of PAHs, which are useful in understanding the vibronic coupling effects in this family.
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Affiliation(s)
- Xiao Cheng
- Hefei National Laboratory for Physical Science at the Microscale, University of Science and Technology of China, 230026 Hefei, China.,Department of Theoretical Chemistry and Biology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology, SE-106 91, Stockholm, Sweden
| | - Minrui Wei
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, Department of Applied Physics, School of Science, Nanjing University of Science and Technology, 210094 Nanjing, China
| | - Guangjun Tian
- Key Laboratory for Microstructural Material Physics of Hebei Province, School of Science, Yanshan University, Qinhuangdao 066004, China
| | - Yi Luo
- Hefei National Laboratory for Physical Science at the Microscale, University of Science and Technology of China, 230026 Hefei, China
| | - Weijie Hua
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, Department of Applied Physics, School of Science, Nanjing University of Science and Technology, 210094 Nanjing, China
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10
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Zhang JR, Wang SY, Ge G, Wei M, Hua W, Ma Y. On the choice of shape and size for truncated cluster-based X-ray spectral simulations of 2D materials. J Chem Phys 2022; 157:094704. [DOI: 10.1063/5.0100175] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Truncated cluster models represent an effective way for simulating X-ray spectra of 2D materials. Here we systematically assessed the influence of two key parameters, the cluster shape (honeycomb, rectangle, or parallelogram) and size, in X-ray photoelectron (XPS) and absorption (XAS) spectra simulations of three 2D materials at five K-edges (graphene, C 1s; C3N, C/N 1s; h-BN, B/N 1s) to pursue the accuracy limit of binding energy (BE) and spectral profile predictions. Several recent XPS experiments reported BEs with differences spanning 0.3, 1.5, 0.7, 0.3, and 0.3 eV, respectively. Our calculations favor the honeycomb model for stable accuracy and fast size convergence, and a honeycomb with ~10 nm side length (120 atoms) is enough to predict accurate 1s BEs for all 2D sheets. Compared to all these experiments, predicted BEs show absolute deviations as follows: 0.4-0.7, 0.0-1.0, 0.4-1.1, 0.6-0.9, and 0.1-0.4 eV. A mean absolute deviation of 0.3 eV was achieved if we compare only to the closest experiment. We found that the sensitivity of computed BEs to different model shapes depends on systems: graphene, sensitive; C3N, weak; h-BN, very weak. This can be attributed to their more or less delocalized π electrons in this series. For this reason, a larger cluster size is required for graphene than the other two to reproduce fine structures in XAS. The general profile of XAS shows weak dependence to model shape. Our calculations provide optimal parameters and accuracy estimations that are useful for X-ray spectral simulations of general graphene-like 2D materials.
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Affiliation(s)
| | | | - Guoyan Ge
- Nanjing University of Science and Technology, China
| | - Minrui Wei
- Nanjing University of Science and Technology, China
| | - Weijie Hua
- MIIT Key Laboratory of Semiconductor Microstructure and Quantum Sensing, Department of Applied Physics, School of Science, Nanjing University of Science and Technology, China
| | - Yong Ma
- School of Physics and Electronics, Shandong Normal University, China
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11
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Wasowicz TJ, Ljubic I, Kivimäki A, RICHTER R. Core-shell excitation of isoxazole at the C, N, and O K-edges – an experimental NEXAFS and theoretical TD-DFT study. Phys Chem Chem Phys 2022; 24:19302-19313. [DOI: 10.1039/d2cp02366k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The near-edge X-ray absorption fine structure (NEXAFS) spectra of the gas-phase isoxazole molecule have been measured by collecting total ion yields at the C, N, and O K-edges. The spectral...
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