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Dupuy R, Buttersack T, Trinter F, Richter C, Gholami S, Björneholm O, Hergenhahn U, Winter B, Bluhm H. The solvation shell probed by resonant intermolecular Coulombic decay. Nat Commun 2024; 15:6926. [PMID: 39138192 PMCID: PMC11322543 DOI: 10.1038/s41467-024-51417-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Accepted: 08/06/2024] [Indexed: 08/15/2024] Open
Abstract
Molecules involved in solvation shells have properties differing from those of the bulk solvent, which can in turn affect reactivity. Among key properties of these molecules are their nature and electronic structure. Widely used tools to characterize this type of property are X-ray-based spectroscopies, which, however, usually lack the capability to selectively probe the solvation-shell molecules. A class of X-ray triggered "non-local" processes has the recognized potential to provide this selectivity. Intermolecular Coulombic decay (ICD) and related processes involve neighbouring molecules in the decay of the X-ray-excited target, and are thus naturally sensitive to its immediate environment. Applying electron spectroscopy to aqueous solutions, we explore the resonant flavours of ICD and demonstrate how it can inform on the first solvation shell of excited solvated cations. One particular ICD process turns out to be a potent marker of the formation of ion pairs. Another gives a direct access to the electron binding energies of the water molecules in the first solvation shell, a quantity previously elusive to direct measurements. The resonant nature of the processes makes them readily measurable, providing powerful new spectroscopic tools.
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Affiliation(s)
- Rémi Dupuy
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany.
- Sorbonne Université, CNRS, Laboratoire de Chimie Physique - Matiere et Rayonnement, LCPMR, F-75005, Paris Cedex 05, France.
| | - Tillmann Buttersack
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Florian Trinter
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
- Institut für Kernphysik, Goethe-Universität Frankfurt, Max-von-Laue-Str. 1, 60438, Frankfurt am Main, Germany
| | - Clemens Richter
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Shirin Gholami
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Olle Björneholm
- Department of Physics and Astronomy, Uppsala University, Box 516, SE-751 20, Uppsala, Sweden
| | - Uwe Hergenhahn
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Bernd Winter
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
| | - Hendrik Bluhm
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195, Berlin, Germany
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2
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Mudryk K, Lee C, Tomaník L, Malerz S, Trinter F, Hergenhahn U, Neumark DM, Slavíček P, Bradforth S, Winter B. How Does Mg 2+(aq) Interact with ATP (aq)? Biomolecular Structure through the Lens of Liquid-Jet Photoemission Spectroscopy. J Am Chem Soc 2024; 146:16062-16075. [PMID: 38802319 PMCID: PMC11177255 DOI: 10.1021/jacs.4c03174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Revised: 04/26/2024] [Accepted: 04/29/2024] [Indexed: 05/29/2024]
Abstract
Liquid-jet photoemission spectroscopy (LJ-PES) allows for a direct probing of electronic structure in aqueous solutions. We show the applicability of the approach to biomolecules in a complex environment, exploring site-specific information on the interaction of adenosine triphosphate in the aqueous phase (ATP(aq)) with magnesium (Mg2+(aq)), highlighting the synergy brought about by the simultaneous analysis of different regions in the photoelectron spectrum. In particular, we demonstrate intermolecular Coulombic decay (ICD) spectroscopy as a new and powerful addition to the arsenal of techniques for biomolecular structure investigation. We apply LJ-PES assisted by electronic-structure calculations to study ATP(aq) solutions with and without dissolved Mg2+. Valence photoelectron data reveal spectral changes in the phosphate and adenine features of ATP(aq) due to interactions with the divalent cation. Chemical shifts in Mg 2p, Mg 2s, P 2p, and P 2s core-level spectra as a function of the Mg2+/ATP concentration ratio are correlated to the formation of [Mg(ATP) 2]6-(aq), [MgATP]2-(aq), and [Mg2ATP](aq) complexes, demonstrating the element sensitivity of the technique to Mg2+-phosphate interactions. The most direct probe of the intermolecular interactions between ATP(aq) and Mg2+(aq) is delivered by the emerging ICD electrons following ionization of Mg 1s electrons. ICD spectra are shown to sensitively probe ligand exchange in the Mg2+-ATP(aq) coordination environment. In addition, we report and compare P 2s data from ATP(aq) and adenosine mono- and diphosphate (AMP(aq) and ADP(aq), respectively) solutions, probing the electronic structure of the phosphate chain and the local environment of individual phosphate units in ATP(aq). Our results provide a comprehensive view of the electronic structure of ATP(aq) and Mg2+-ATP(aq) complexes relevant to phosphorylation and dephosphorylation reactions that are central to bioenergetics in living organisms.
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Affiliation(s)
- Karen Mudryk
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Chin Lee
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Lukáš Tomaník
- Department
of Physical Chemistry, University of Chemistry
and Technology, Prague, Technická 5, Prague 6 16628, Czech Republic
| | - Sebastian Malerz
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Florian Trinter
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
- Institut
für Kernphysik, Goethe-Universität
Frankfurt, Max-von-Laue-Straße
1, 60438 Frankfurt
am Main, Germany
| | - Uwe Hergenhahn
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Daniel M. Neumark
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Petr Slavíček
- Department
of Physical Chemistry, University of Chemistry
and Technology, Prague, Technická 5, Prague 6 16628, Czech Republic
| | - Stephen Bradforth
- Department
of Chemistry, University of Southern California, Los Angeles, California 90089, United States
| | - Bernd Winter
- Fritz-Haber-Institut
der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
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3
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Bloß D, Trinter F, Unger I, Zindel C, Honisch C, Viehmann J, Kiefer N, Marder L, Küstner-Wetekam C, Heikura E, Cederbaum LS, Björneholm O, Hergenhahn U, Ehresmann A, Hans A. X-ray radiation damage cycle of solvated inorganic ions. Nat Commun 2024; 15:4594. [PMID: 38816362 PMCID: PMC11139941 DOI: 10.1038/s41467-024-48687-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Accepted: 05/07/2024] [Indexed: 06/01/2024] Open
Abstract
X-ray-induced damage is one of the key topics in radiation chemistry. Substantial damage is attributed to low-energy electrons and radicals emerging from direct inner-shell photoionization or produced by subsequent processes. We apply multi-electron coincidence spectroscopy to X-ray-irradiated aqueous solutions of inorganic ions to investigate the production of low-energy electrons (LEEs) in a predicted cascade of intermolecular charge- and energy-transfer processes, namely electron-transfer-mediated decay (ETMD) and interatomic/intermolecular Coulombic decay (ICD). An advanced coincidence technique allows us to identify several LEE-producing steps during the decay of 1s vacancies in solvated Mg2+ ions, which escaped observation in previous non-coincident experiments. We provide strong evidence for the predicted recovering of the ion's initial state. In natural environments the recovering of the ion's initial state is expected to cause inorganic ions to be radiation-damage hot spots, repeatedly producing destructive particles under continuous irradiation.
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Affiliation(s)
- Dana Bloß
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany.
| | - Florian Trinter
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Berlin, Germany
- Institut für Kernphysik, Goethe-Universität Frankfurt, Frankfurt am Main, Germany
| | - Isaak Unger
- Chemical and Biomolecular Physics, Department of Physics and Astronomy, Uppsala University, Uppsala, Sweden
| | - Christina Zindel
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany
| | - Carolin Honisch
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany
| | - Johannes Viehmann
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany
| | - Nils Kiefer
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany
| | - Lutz Marder
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany
| | - Catmarna Küstner-Wetekam
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany
| | - Emilia Heikura
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany
| | - Lorenz S Cederbaum
- Theoretical Chemistry, Institute of Physical Chemistry, University of Heidelberg, Heidelberg, Germany
| | - Olle Björneholm
- Chemical and Biomolecular Physics, Department of Physics and Astronomy, Uppsala University, Uppsala, Sweden
| | - Uwe Hergenhahn
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Berlin, Germany
| | - Arno Ehresmann
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany
| | - Andreas Hans
- Institute of Physics and Center for Interdisciplinary Nanostructure Science and Technology (CINSaT), University of Kassel, Kassel, Germany.
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4
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Gopakumar G, Unger I, Slavíček P, Hergenhahn U, Öhrwall G, Malerz S, Céolin D, Trinter F, Winter B, Wilkinson I, Caleman C, Muchová E, Björneholm O. Radiation damage by extensive local water ionization from two-step electron-transfer-mediated decay of solvated ions. Nat Chem 2023; 15:1408-1414. [PMID: 37620544 PMCID: PMC10533389 DOI: 10.1038/s41557-023-01302-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Accepted: 07/21/2023] [Indexed: 08/26/2023]
Abstract
Biomolecular radiation damage is largely mediated by radicals and low-energy electrons formed by water ionization rather than by direct ionization of biomolecules. It was speculated that such an extensive, localized water ionization can be caused by ultrafast processes following excitation by core-level ionization of hydrated metal ions. In this model, ions relax via a cascade of local Auger-Meitner and, importantly, non-local charge- and energy-transfer processes involving the water environment. Here, we experimentally and theoretically show that, for solvated paradigmatic intermediate-mass Al3+ ions, electronic relaxation involves two sequential solute-solvent electron transfer-mediated decay processes. The electron transfer-mediated decay steps correspond to sequential relaxation from Al5+ to Al3+ accompanied by formation of four ionized water molecules and two low-energy electrons. Such charge multiplication and the generated highly reactive species are expected to initiate cascades of radical reactions.
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Affiliation(s)
- G Gopakumar
- Department of Physics and Astronomy, Uppsala University, Uppsala, Sweden
| | - I Unger
- Department of Physics and Astronomy, Uppsala University, Uppsala, Sweden
- FS-BIG, DESY, Hamburg, Germany
| | - P Slavíček
- Department of Physical Chemistry, University of Chemistry and Technology, Prague, Czech Republic
| | - U Hergenhahn
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Berlin, Germany
| | - G Öhrwall
- MAX IV Laboratory, Lund University, Lund, Sweden
| | - S Malerz
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Berlin, Germany
| | - D Céolin
- Synchrotron SOLEIL, L'Orme des Merisiers, Saint-Aubin, Paris, France
| | - F Trinter
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Berlin, Germany
- Institut für Kernphysik, Goethe-Universität Frankfurt am Main, Frankfurt am Main, Germany
| | - B Winter
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Berlin, Germany
| | - I Wilkinson
- Institute for Electronic Structure Dynamics, Helmholtz-Zentrum Berlin für Materialien und Energie, Berlin, Germany
| | - C Caleman
- Department of Physics and Astronomy, Uppsala University, Uppsala, Sweden
- Center for Free-Electron Laser Science, DESY, Hamburg, Germany
| | - E Muchová
- Department of Physical Chemistry, University of Chemistry and Technology, Prague, Czech Republic.
| | - O Björneholm
- Department of Physics and Astronomy, Uppsala University, Uppsala, Sweden.
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5
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Zhou J, Jia S, Hu X, Wang E, Xue X, Wu Y, Wang J, Dorn A, Ren X. Intermolecular Charge Transfer Induced Fragmentation of Formic Acid Dimers. PHYSICAL REVIEW LETTERS 2023; 130:233001. [PMID: 37354420 DOI: 10.1103/physrevlett.130.233001] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 01/19/2023] [Accepted: 04/20/2023] [Indexed: 06/26/2023]
Abstract
We investigate the intermolecular nonradiative charge transfer process in a double hydrogen-bonded formic acid (FA) dimer, initiated by electron-collision induced double ionization of one FA molecule. Through fragment ions and electron coincident momentum measurements and ab initio calculations, we obtain direct evidence that electron transfer from the neighboring FA molecule to fill one of the two vacancies occurs by a potential energy curve crossing of FA^{++}+FA with FA^{+}+FA^{+*} curves, forming an electronic excited state of dicationic dimers. This process causes the breaking of two hydrogen bonds and subsequently the cleavage of C─H and C─O covalent bonds in the dimers, which is expected to be a general phenomenon occurring in molecular complexes and can have important implications for radiation damage to biological matter.
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Affiliation(s)
- Jiaqi Zhou
- School of Physics, Xi'an Jiaotong University, Xi'an 710049, China
| | - Shaokui Jia
- School of Physics, Xi'an Jiaotong University, Xi'an 710049, China
| | - Xiaoqing Hu
- Institute of Applied Physics and Computational Mathematics, Beijing 100088, China
| | - Enliang Wang
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Modern Physics, University of Science and Technology of China, Hefei 230026, China
| | - Xiaorui Xue
- School of Physics, Xi'an Jiaotong University, Xi'an 710049, China
| | - Yong Wu
- Institute of Applied Physics and Computational Mathematics, Beijing 100088, China
| | - Jianguo Wang
- Institute of Applied Physics and Computational Mathematics, Beijing 100088, China
| | - Alexander Dorn
- Max-Planck-Institut für Kernphysik, Saupfercheckweg 1, 69117 Heidelberg, Germany
| | - Xueguang Ren
- School of Physics, Xi'an Jiaotong University, Xi'an 710049, China
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6
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Rajpal A, Huart L, Nicolas C, Chevallard C, Guigner JM, Dasilva P, Mercere P, Gervais B, Hervé du Penhoat MA, Renault JP. Superoxide Production under Soft X-ray Irradiation of Liquid Water. J Phys Chem B 2023; 127:4277-4285. [PMID: 37140453 DOI: 10.1021/acs.jpcb.3c00932] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Soft X-rays behave like particles with high linear energy transfer, as they deposit a large amount of their energy in the nanometric range, triggered by inner-shell ionization. In water, this can lead to the formation of a doubly ionized water molecule (H2O2+) and the emission of two secondary electrons (photoelectron and Auger electron). Our focus lies on detecting and quantifying the superoxide (HO2°) production via the direct pathway, i.e., from the reaction between the dissociation product of H2O2+, i.e., the oxygen atom (∼4 fs), and the °OH radicals present in the secondary electron tracks. The HO2° yield for 1620 eV photons, via this reaction pathway, was found to be 0.005 (±0.0007) μmol/J (formed within the ∼ps range). Experiments were also performed to determine the yield of HO2° production via another (indirect) pathway, involving solvated electrons. The indirect HO2° yield, measured experimentally as a function of photon energy (from 1700 to 350 eV), resulted in a steep decrease at around 1280 eV and a minimum close to zero at 800 eV. This behavior in contradiction with the theoretical prediction reveals the complexity hidden in the intratrack reactions.
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Affiliation(s)
- Aashini Rajpal
- Université Paris-Saclay, CEA, CNRS, NIMBE, Gif-sur-Yvette 91191, France
- Sorbonne Université, IMPMC, UMR CNRS 7590, IMPMC, 75005 Paris, France
- Synchrotron SOLEIL, Saint Aubin 91190, France
| | - Lucie Huart
- Université Paris-Saclay, CEA, CNRS, NIMBE, Gif-sur-Yvette 91191, France
- Sorbonne Université, IMPMC, UMR CNRS 7590, IMPMC, 75005 Paris, France
- Synchrotron SOLEIL, Saint Aubin 91190, France
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7
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Pelimanni E, Hans A, Heikura E, Huttula M, Patanen M. Efficient neutralization of core ionized species in an aqueous environment. Phys Chem Chem Phys 2022; 24:11646-11653. [PMID: 35506916 DOI: 10.1039/d2cp01178f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Core ionization dynamics of argon-water heteroclusters ArM[H2O]N are investigated using a site and process selective experimental scheme combining 3 keV electron irradiation with Auger electron-ion-ion multi-coincidence detection. The formation of Ar 2p-1 vacancies followed by non-radiative decay to intermediate one-site doubly ionized states Ar2+(3p-2)-ArM-1[H2O]N and subsequent redistribution of charge to the cluster environment are monitored. At low argon concentrations the emission of an [H2O]n'H+/[H2O]n''H+ ion pair is the dominant outcome, implying on high efficiency of charge transfer to the water network. Increasing the condensation fraction of argon in the mixed clusters and/or to pure argon clusters is reflected as a growing yield of Arm'+/Arm''+ ion pairs, providing a fingerprint of the precursor heterocluster beam composition. The coincident Auger electron spectra, resolved with better than 1 eV resolution, show only subtle differences and thereby reflect the local nature of the initial Auger decay step. The results lead to better understanding of inner shell ionization processes in heterogeneous clusters and in aqueous environments in general.
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Affiliation(s)
- Eetu Pelimanni
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu, Box 3000, FI-90014, Finland.
| | - Andreas Hans
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu, Box 3000, FI-90014, Finland. .,Universität Kassel, Institut für Physik und CINSaT, Heinrich-Plett-Straße 40, 34132, Kassel, Germany
| | - Emilia Heikura
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu, Box 3000, FI-90014, Finland. .,Universität Kassel, Institut für Physik und CINSaT, Heinrich-Plett-Straße 40, 34132, Kassel, Germany
| | - Marko Huttula
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu, Box 3000, FI-90014, Finland.
| | - Minna Patanen
- Nano and Molecular Systems Research Unit, Faculty of Science, University of Oulu, Box 3000, FI-90014, Finland.
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