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For: Boeije Y, Olivucci M. From a one-mode to a multi-mode understanding of conical intersection mediated ultrafast organic photochemical reactions. Chem Soc Rev 2023;52:2643-2687. [PMID: 36970950 DOI: 10.1039/d2cs00719c] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/29/2023]
Number Cited by Other Article(s)
1
Zhou BC, Yang RB, Cai CY, Wang YW, Li ZQ, Wang ZW. Landau-Zener transitions with spin flipping in chiral structures. J Chem Phys 2025;162:204303. [PMID: 40401672 DOI: 10.1063/5.0262656] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2025] [Accepted: 05/05/2025] [Indexed: 05/23/2025]  Open
2
Mgbukwu M, Fu X, Peshkov RY, Doellerer D, Granados Buitrago C, Feringa BL, Haacke S, Crespi S, Léonard J. Tuning the Photoisomerization Mechanism of Oxindole Switches with Electron-Donating Substituents. J Phys Chem B 2025;129:3839-3850. [PMID: 40197135 DOI: 10.1021/acs.jpcb.4c06856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/09/2025]
3
Gong SS, Cao CH, Zheng C, Tan XZ, Li YX, Liu H, Fan C, Pu S, Sun Q. Rational Construction of a Pyrimido[2,1-b] Benzothiazole-Based Photoswitchable Smart AIE Material: A Theoretical Insight into Fluorescence Switching Mechanism of the Chimeric Dyad. Chemistry 2025;31:e202500028. [PMID: 39968710 DOI: 10.1002/chem.202500028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2025] [Revised: 02/19/2025] [Accepted: 02/19/2025] [Indexed: 02/20/2025]
4
Romanov I, Boeije Y, Toldo JM, Do Casal MT, Barbatti M, Buma WJ. Spectroscopy and Excited-State Dynamics of Methyl Ferulate in Molecular Beams. J Phys Chem A 2025;129:36-49. [PMID: 39688363 PMCID: PMC11726680 DOI: 10.1021/acs.jpca.4c05792] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2024] [Revised: 11/28/2024] [Accepted: 12/02/2024] [Indexed: 12/18/2024]
5
Ghosh I, Shen Q, Wu PJE, Engel GS. Vibronic Conical Intersection Trajectory Signatures in Wave Packet Coherences. J Phys Chem Lett 2024;15:12494-12500. [PMID: 39668646 DOI: 10.1021/acs.jpclett.4c02979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2024]
6
Rukin PS, Fortino M, Prezzi D, Rozzi CA. Complementing Adiabatic and Nonadiabatic Methods To Understand Internal Conversion Dynamics in Porphyrin Derivatives. J Chem Theory Comput 2024;20:10759-10769. [PMID: 39662887 DOI: 10.1021/acs.jctc.4c00698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2024]
7
Sen S, Deupi X. Study of Photoselectivity in Linear Conjugated Chromophores Using the XMS-CASPT2 Method. ACS PHYSICAL CHEMISTRY AU 2024;4:736-749. [PMID: 39634649 PMCID: PMC11613312 DOI: 10.1021/acsphyschemau.4c00065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/06/2024] [Revised: 09/18/2024] [Accepted: 09/20/2024] [Indexed: 12/07/2024]
8
Xie Y, Yang Y, Zhu X, Chen A, Gu B. Nondirect-Product Local Diabatic Representation with Smolyak Sparse Grids. J Chem Theory Comput 2024;20:9512-9521. [PMID: 39413423 DOI: 10.1021/acs.jctc.4c00673] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2024]
9
Smitienko O, Feldman T, Shelaev I, Gostev F, Aybush A, Cherepanov D, Nadtochenko V, Ostrovsky M. Reversible Photochromic Reactions of Bacteriorhodopsin from Halobacterium salinarum at Femto- and Picosecond Times. Molecules 2024;29:4847. [PMID: 39459214 PMCID: PMC11510181 DOI: 10.3390/molecules29204847] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2024] [Revised: 10/11/2024] [Accepted: 10/11/2024] [Indexed: 10/28/2024]  Open
10
Kim P, Roy S, Valentine AJS, Liu X, Kromer S, Kim TW, Li X, Castellano FN, Chen LX. Real-time capture of nuclear motions influencing photoinduced electron transfer. Chem Sci 2024:d4sc01876a. [PMID: 39184296 PMCID: PMC11339639 DOI: 10.1039/d4sc01876a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2024] [Accepted: 08/08/2024] [Indexed: 08/27/2024]  Open
11
Sunny AS, Cleven EC, Kumar P, Venkataramani S, Walls JD, Ramamurthy V. Structure, Dynamics, and Reactivity of Encapsulated Molecules in Restricted Spaces: Arylazoisoxazoles within an Octa Acid Capsule. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024;40:17638-17655. [PMID: 39110852 DOI: 10.1021/acs.langmuir.4c01996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/21/2024]
12
Wijayaratna D, Sacchetta F, Pedraza-González L, Fanelli F, Sugihara T, Koyanagi M, Piyawardana S, Ghotra K, Thotamune W, Terakita A, Olivucci M, Karunarathne A. In-silico predicted mouse melanopsins with blue spectral shifts deliver efficient subcellular signaling. Cell Commun Signal 2024;22:394. [PMID: 39118111 PMCID: PMC11312219 DOI: 10.1186/s12964-024-01753-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Accepted: 07/17/2024] [Indexed: 08/10/2024]  Open
13
Phelps R, Agapaki E, Brechin EK, Johansson JO. Tracking the conical intersection dynamics for the photoinduced Jahn-Teller switch of a Mn(iii) complex. Chem Sci 2024;15:11956-11964. [PMID: 39092124 PMCID: PMC11290422 DOI: 10.1039/d4sc00145a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Accepted: 06/24/2024] [Indexed: 08/04/2024]  Open
14
Roy P, Sardjan AS, Browne WR, Feringa BL, Meech SR. Excited State Dynamics in Unidirectional Photochemical Molecular Motors. J Am Chem Soc 2024;146:12255-12270. [PMID: 38656968 PMCID: PMC11082934 DOI: 10.1021/jacs.4c01019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 04/05/2024] [Accepted: 04/08/2024] [Indexed: 04/26/2024]
15
Ibele LM, Agostini F. Exploring Exact-Factorization-Based Trajectories for Low-Energy Dynamics near a Conical Intersection. J Phys Chem A 2024. [PMID: 38660710 DOI: 10.1021/acs.jpca.4c00555] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
16
Palombo R, Barneschi L, Pedraza-González L, Yang X, Olivucci M. Picosecond quantum-classical dynamics reveals that the coexistence of light-induced microbial and animal chromophore rotary motion modulates the isomerization quantum yield of heliorhodopsin. Phys Chem Chem Phys 2024;26:10343-10356. [PMID: 38501246 DOI: 10.1039/d4cp00193a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/20/2024]
17
Taylor JT, Tozer DJ, Curchod BFE. On the description of conical intersections between excited electronic states with LR-TDDFT and ADC(2). J Chem Phys 2023;159:214115. [PMID: 38059547 DOI: 10.1063/5.0176140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Accepted: 11/14/2023] [Indexed: 12/08/2023]  Open
18
Khadka D, Jayasinghe-Arachchige VM, Prabhakar R, Ramamurthy V. Application of molecular dynamic simulations in modeling the excited state behavior of confined molecules. Photochem Photobiol Sci 2023:10.1007/s43630-023-00486-2. [PMID: 37843722 DOI: 10.1007/s43630-023-00486-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Accepted: 09/20/2023] [Indexed: 10/17/2023]
19
Dalton J, Toldo JM, Allais F, Barbatti M, Stavros VG. Understanding the Impact of Symmetrical Substitution on the Photodynamics of Sinapate Esters Using Gas-Phase Ultrafast Spectroscopy. J Phys Chem Lett 2023;14:8771-8779. [PMID: 37738948 PMCID: PMC10561265 DOI: 10.1021/acs.jpclett.3c02134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 09/08/2023] [Indexed: 09/24/2023]
20
Kuntze K, Pooler DRS, Di Donato M, Hilbers MF, van der Meulen P, Buma WJ, Priimagi A, Feringa BL, Crespi S. A visible-light-driven molecular motor based on barbituric acid. Chem Sci 2023;14:8458-8465. [PMID: 37592992 PMCID: PMC10430646 DOI: 10.1039/d3sc03090c] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 07/20/2023] [Indexed: 08/19/2023]  Open
21
Fadini A, Hutchison CDM, Morozov D, Chang J, Maghlaoui K, Perrett S, Luo F, Kho JCX, Romei MG, Morgan RML, Orr CM, Cordon-Preciado V, Fujiwara T, Nuemket N, Tosha T, Tanaka R, Owada S, Tono K, Iwata S, Boxer SG, Groenhof G, Nango E, van Thor JJ. Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J Am Chem Soc 2023. [PMID: 37418747 PMCID: PMC10375524 DOI: 10.1021/jacs.3c02313] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/09/2023]
22
Chakraborty P, Couto RC, List NH. Deciphering Methylation Effects on S2(ππ*) Internal Conversion in the Simplest Linear α,β-Unsaturated Carbonyl. J Phys Chem A 2023. [PMID: 37331016 DOI: 10.1021/acs.jpca.3c02582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/20/2023]
23
Fdez Galván I, Lindh R. Smooth Things Come in Threes: A Diabatic Surrogate Model for Conical Intersection Optimization. J Chem Theory Comput 2023. [PMID: 37192531 DOI: 10.1021/acs.jctc.3c00389] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
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