1
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Seidel J, Diep P, Dong Z, Cotruvo JA, Park DM. EF-Hand Battle Royale: Hetero-ion Complexation in Lanmodulin. JACS AU 2024; 4:4273-4284. [PMID: 39610722 PMCID: PMC11600183 DOI: 10.1021/jacsau.4c00628] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/15/2024] [Revised: 08/15/2024] [Accepted: 08/19/2024] [Indexed: 11/30/2024]
Abstract
The lanmodulin (LanM) protein has emerged as an effective means for rare earth element (REE) extraction and separation from complex feedstocks without the use of organic solvents. Whereas the binding of LanM to individual REEs has been well characterized, little is known about the thermodynamics of mixed metal binding complexes (i.e., heterogeneous ion complexes), which limits the ability to accurately predict separation performance for a given metal ion mixture. In this paper, we employ the law of mass action to establish a theory of perfect cooperativity for LanM-REE complexation at the two highest-affinity binding sites. The theory is then used to derive an equation that explains the nonintuitive REE binding behavior of LanM, where separation factors for binary pairs of ions vary widely based on the ratio of ions in the aqueous phase, a phenomenon that is distinct from single-ion-binding chemical chelators. We then experimentally validate this theory and perform the first quantitative characterization of LanM complexation with heterogeneous ion pairs using resin-immobilized LanM. Importantly, the resulting homogeneous and heterogeneous constants enable accurate prediction of the equilibrium state of LanM in the presence of mixtures of up to 10 REEs, confirming that the perfect cooperativity model is an accurate mechanistic description of REE complexation by LanM. We further employ the model to simulate separation performance over a range of homogeneous and heterogeneous binding constants, revealing important insights into how mixed binding differentially impacts REE separations based on the relative positioning of the ion pairs within the lanthanide series. In addition to informing REE separation process optimization, these results provide mathematical and experimental insight into competition dynamics in other ubiquitous and medically relevant, cooperative binding proteins, such as calmodulin.
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Affiliation(s)
- Jeremy Seidel
- Critical
Materials Innovation Hub, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Patrick Diep
- Critical
Materials Innovation Hub, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Ziye Dong
- Critical
Materials Innovation Hub, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Joseph A. Cotruvo
- Department
of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Dan M. Park
- Critical
Materials Innovation Hub, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
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2
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Bertoli AC, Novaes PAA, Costa LT, De Almeida WB, Duarte HA. Insights into rare earth element speciation: unraveling sulfate and hydrolysis complexes through DFT calculations. J Mol Model 2024; 30:412. [PMID: 39579224 DOI: 10.1007/s00894-024-06213-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Accepted: 11/05/2024] [Indexed: 11/25/2024]
Abstract
CONTEXT Rare earth elements (REE) are indispensable in numerous green technologies owing to their exceptional physical and chemical attributes. Separating REE is a pivotal process to meet the increasing demands of the high-tech industry. Understanding the hydrolysis of REE in aqueous environments marks the initial stride in comprehending their separation mechanisms. Sulfate commonly coexists in high-concentration solutions alongside REE, stemming from mineral processing. We analyzed the hydrolysis of REE and their complexes with sulfate using DFT methods. We present and discuss on the structural characteristics of hydrolysis species and sulfate complexes in alignment with existing experimental data. Estimates of Gibbs free energies for hydrolysis and sulfate complex formation were compared against literature values. REE pose challenges owing to the labile nature of aqua complexes and the pivotal role of system dynamics. We showed that hydrolysis reactions could be suitably modeled, yielding an error margin of approximately 5 kcal mol-1 concerning experimental values, employing the M06 exchange-correlation functional with the SMD implicit solvation model. However, sulfate chemical species proved to be more challenging, exhibiting larger error margins with substantial variations across the REE series. The Raman spectrum analysis of lanthanum sulfate complexes demonstrated excellent agreement with experimental values. METHOD We applied the M06, PBE, and PBE0 exchange-correlation functionals combined with def2-TZVP basis sets and SMD to obtain the Gibbs free energies of hydrolysis and sulfate complexation with lanthanides in aqueous solution. The calculations were performed using the ORCA program.
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Affiliation(s)
- Alexandre C Bertoli
- Departamento de Química Inorgânica, Universidade Federal do Rio de Janeiro - UFRJ, Centro de Tecnologia - Cidade Universitária, Rio de Janeiro, RJ, 21941-909, Brazil.
- Instituto de Química, Universidade Federal Fluminense - UFF, Outeiro de São João Batista S/N, Campus Do Valonguinho, Centro, Niterói, Rio de Janeiro, RJ, 24020-141, Brazil.
| | - Pedro A A Novaes
- Grupo de Pesquisa Em Química Inorgânica Teórica (GPQIT), Departamento de Química, Universidade Federal de Minas Gerais - UFMG, Av. Pres. Antônio Carlos, Pampulha, Belo Horizonte, MG, 31270-901, Brazil
| | - Luciano T Costa
- Instituto de Química, Universidade Federal Fluminense - UFF, Outeiro de São João Batista S/N, Campus Do Valonguinho, Centro, Niterói, Rio de Janeiro, RJ, 24020-141, Brazil
| | - Wagner B De Almeida
- Instituto de Química, Universidade Federal Fluminense - UFF, Outeiro de São João Batista S/N, Campus Do Valonguinho, Centro, Niterói, Rio de Janeiro, RJ, 24020-141, Brazil
| | - Hélio A Duarte
- Grupo de Pesquisa Em Química Inorgânica Teórica (GPQIT), Departamento de Química, Universidade Federal de Minas Gerais - UFMG, Av. Pres. Antônio Carlos, Pampulha, Belo Horizonte, MG, 31270-901, Brazil.
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3
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Deblonde GJP. Biogeochemistry of Actinides: Recent Progress and Perspective. ACS ENVIRONMENTAL AU 2024; 4:292-306. [PMID: 39582760 PMCID: PMC11583103 DOI: 10.1021/acsenvironau.4c00037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Revised: 10/23/2024] [Accepted: 10/24/2024] [Indexed: 11/26/2024]
Abstract
Actinides are elements that are often feared because of their radioactive nature and potentially devastating consequences to humans and the environment if not managed properly. As such, their chemical interactions with the biosphere and geochemical environment, i.e., their "biogeochemistry," must be studied and understood in detail. In this Review, a summary of the past discoveries and recent advances in the field of actinide biogeochemistry is provided with a particular emphasis on actinides other than thorium and uranium (i.e., actinium, neptunium, plutonium, americium, curium, berkelium, and californium) as they originate from anthropogenic activities and can be mobile in the environment. The nuclear properties of actinide isotopes found in the environment and used in research are reviewed with historical context. Then, the coordination chemistry properties of actinide ions are contrasted with those of common metal ions naturally present in the environment. The typical chelators that can impact the biogeochemistry of actinides are then reviewed. Then, the role of metalloproteins in the biogeochemistry of actinides is put into perspective since recent advances in the field may have ramifications in radiochemistry and for the long-term management of nuclear waste. Metalloproteins are ubiquitous ligands in nature but, as discussed in this Review, they have largely been overlooked for actinide chemistry, especially when compared to traditional environmental chelators. Without discounting the importance of abundant and natural actinide ions (i.e., Th4+ and UO2 2+), the main focus of this review is on trivalent actinides because of their prevalence in the fields of nuclear fuel cycles, radioactive waste management, heavy element research, and, more recently, nuclear medicine. Additionally, trivalent actinides share chemical similarities with the rare earth elements, and recent breakthroughs in the field of lanthanide-binding chelators may spill into the field of actinide biogeochemistry, as discussed hereafter.
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Affiliation(s)
- Gauthier J.-P. Deblonde
- Physical and Life Sciences
Directorate, Lawrence Livermore National
Laboratory, Livermore, California 94550, United States
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4
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Goyal P, Srivastava A, Sengupta A, Das P, Ali SM, Verboom W, Mohapatra PK. Complexation of Trivalent Lanthanides with Hexaalkyl Nitrilotriacetamides into Methylimidazolium-Based Ionic Liquids: Spectroscopic, Electrochemical, Calorimetric, and Theoretical Insights. Inorg Chem 2024; 63:21963-21980. [PMID: 39499278 DOI: 10.1021/acs.inorgchem.4c03249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2024]
Abstract
Exothermic, spontaneous inner-sphere complexation of trivalent lanthanides with N,N,N',N',N″,N″-hexaalkyl-substituted nitrilotriacetamides (HRNTAs) into 1-hexyl-3-methylimidazolium-bis(trifluoromethylsulfonyl)imide (C6mim NTf2) is reported with a predominant presence of ML and ML2 complexes having complexation constants, β1Eu 3.10 ± 0.02 ,β1Nd 2.67 ± 0.03 and β2Eu 5.22 ± 0.04, β2Nd 4.95 ± 0.02, respectively, for the n-butyl-substituted HRNTA (HBNTA); while those for the n-hexyl derivative (HHNTA) are β1Eu 4.27 ± 0.03, β1Nd 3.71 ± 0.03 and β2Eu 7.70 ± 0.03, β2Nd 7.18 ± 0.04, respectively. HHNTA shows better complexing ability; whereas the stronger complexation of the Nd3+ over Eu3+ is attributed to the lanthanide contraction. Furthermore, the nature of the ionic liquid also influences the extent of complexation with the trend: C4mim NTf2 > C6mim NTf2 > C8mim NTf2, which follows the order of their dielectric constants. Judd-Ofelt parameters were calculated from photoluminescence data to get an idea about the symmetry of the Eu3+ complexes. Electrochemical investigations give diffusion coefficient values of 1.17 × 10-7 and 8.26 × 10-8 cm2/s for the Eu3+ complexes of HBNTA and HHNTA, respectively. Changes in the spectral characteristics and peak positions are evidenced in the FTIR spectra on the complexation of Eu3+ with the HRNTA ligands in C6mim NTf2. Structure optimization for the complexes was performed by DFT computations.
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Affiliation(s)
- Priya Goyal
- Radiochemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085, India
| | - Ashutosh Srivastava
- Radiochemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085, India
| | - Arijit Sengupta
- Radiochemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085, India
- Homi Bhabha National Institute, Mumbai 400094, India
| | - Pratik Das
- Product Development Division, Bhabha Atomic Research Centre, Mumbai 400 085, India
| | - Sheikh Musharaf Ali
- Homi Bhabha National Institute, Mumbai 400094, India
- Chemical Engineering Division, Bhabha Atomic Research Centre, Mumbai 400085, India
| | - Willem Verboom
- Molecular Nanofabrication Group, Department of Molecules & Materials, MESA+ Institute for Nanotechnology, University of Twente, P.O. Box 217, 7500 AE Enschede, The Netherlands
| | - Prasanta K Mohapatra
- Radiochemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085, India
- Homi Bhabha National Institute, Mumbai 400094, India
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5
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Liu Y, Gao D, He Y, Ma J, Chong SY, Qi X, Ting HJ, Luo Z, Yi Z, Tang J, Chang C, Wang J, Sheng Z, Zheng H, Liu X. Single-point mutated lanmodulin as a high-performance MRI contrast agent for vascular and kidney imaging. Nat Commun 2024; 15:9834. [PMID: 39537629 PMCID: PMC11561317 DOI: 10.1038/s41467-024-54167-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Accepted: 11/04/2024] [Indexed: 11/16/2024] Open
Abstract
Magnetic resonance imaging contrast agents can enhance diagnostic precision but often face limitations such as short imaging windows, low tissue specificity, suboptimal contrast enhancement, or potential toxicity, which affect resolution and long-term monitoring. Here, we present a protein contrast agent based on lanmodulin, engineered with a single-point mutation at position 108 from N to D to yield maximum gadolinium binding sites. After loading with Gd3+ ions, the resulting protein complex, LanND-Gd, exhibits efficient renal clearance, high relaxivity, and prolonged renal retention compared to commercial agents. LanND-Gd enables high-performance visualization of whole-body structures and brain vasculature in male mice at a resolution finer than one hundred micrometers. In male ischemia mouse models, LanND-Gd also improves kidney dysfunction monitoring while minimizing risks of neural toxicity or immunogenic reactions. This protein-based contrast agent offers superior image quality, improved biocompatibility, and extended imaging timeframes, promising significant advancements in magnetic resonance-based diagnostics and patient outcomes.
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Affiliation(s)
- Yuxia Liu
- Department of Chemistry, National University of Singapore, Singapore, Singapore
- The N.1 Institute for Health, National University of Singapore, Singapore, Singapore
| | - Duyang Gao
- Biomedical Imaging Science and System Key Laboratory, Chinese Academy of Sciences, Shenzhen, China
- Paul C. Lauterbur Research Center for Biomedical Imaging, Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
| | - Yuanyuan He
- School of Physics, Peking University, Beijing, China
- Innovation Laboratory of Terahertz Biophysics, National Innovation Institute of Defense Technology, Beijing, China
| | - Jing Ma
- School of Physics, Peking University, Beijing, China
- Innovation Laboratory of Terahertz Biophysics, National Innovation Institute of Defense Technology, Beijing, China
| | - Suet Yen Chong
- Department of Surgery, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Cardiovascular Research Institute, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Nanomedicine Translational Research Programme, Centre for NanoMedicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
| | - Xinyi Qi
- Department of Surgery, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Cardiovascular Research Institute, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Nanomedicine Translational Research Programme, Centre for NanoMedicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
| | - Hui Jun Ting
- Department of Surgery, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Cardiovascular Research Institute, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Nanomedicine Translational Research Programme, Centre for NanoMedicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
| | - Zichao Luo
- Department of Chemistry, National University of Singapore, Singapore, Singapore
- The N.1 Institute for Health, National University of Singapore, Singapore, Singapore
| | - Zhigao Yi
- Department of Chemistry, National University of Singapore, Singapore, Singapore
- The N.1 Institute for Health, National University of Singapore, Singapore, Singapore
| | - Jingyu Tang
- Department of Chemistry, National University of Singapore, Singapore, Singapore
- The N.1 Institute for Health, National University of Singapore, Singapore, Singapore
| | - Chao Chang
- School of Physics, Peking University, Beijing, China
- Innovation Laboratory of Terahertz Biophysics, National Innovation Institute of Defense Technology, Beijing, China
| | - Jiongwei Wang
- Department of Surgery, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Cardiovascular Research Institute, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Nanomedicine Translational Research Programme, Centre for NanoMedicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
- Department of Physiology, National University of Singapore, Singapore, Singapore
| | - Zonghai Sheng
- Biomedical Imaging Science and System Key Laboratory, Chinese Academy of Sciences, Shenzhen, China.
- Paul C. Lauterbur Research Center for Biomedical Imaging, Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China.
| | - Hairong Zheng
- Biomedical Imaging Science and System Key Laboratory, Chinese Academy of Sciences, Shenzhen, China.
- Paul C. Lauterbur Research Center for Biomedical Imaging, Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China.
| | - Xiaogang Liu
- Department of Chemistry, National University of Singapore, Singapore, Singapore.
- The N.1 Institute for Health, National University of Singapore, Singapore, Singapore.
- Department of Surgery, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
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6
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Li B, Wang L, Kang Y, Cao H, Liu Y, He Q, Li Z, Tang X, Chen J, Wang L, Xu C. Amino Acid Decorated Phenanthroline Diimide as Sustainable Hydrophilic Am(III) Masking Agent with High Acid Resistance. JACS AU 2024; 4:3668-3678. [PMID: 39328760 PMCID: PMC11423330 DOI: 10.1021/jacsau.4c00659] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/22/2024] [Revised: 08/27/2024] [Accepted: 08/27/2024] [Indexed: 09/28/2024]
Abstract
Hydrophilic actinide masking agents are believed to be efficient alternatives to circumvent the extensive hazardous organic solvents/diluents typically employed in the liquid-liquid extraction for nuclear waste management. However, the practical application of hydrophilic ligands faces significant challenges in both synthetic/purification procedures and, more importantly, the acid resistance of the ligands themselves. Herein, we have demonstrated the combination of phenanthroline diimide framework with a biomotif of histidine flanking parts could achieve efficient separation of trivalent lanthanides/actinides (also actinides/actinides) under high acidity of over 1 M HNO3. This approach leverages the soft-hard coordination properties of N, O-hybrid ligands, as well as the energetically favored imides for metal coordination and the multiple protonation of histidine. These factors collectively contribute to the synthesis of an easily accessible, highly water-soluble, superior selective, and acid-resistant Am(III) masking agent. Thus, we have shown in this paper, by proper combination of synthetic N, O-hybrid ligand with amino acid, trivalent lanthanide and actinide separation could be efficiently fulfilled in a more sustainable manner.
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Affiliation(s)
- Bin Li
- Institute
of Nuclear and New Energy Technology, Tsinghua
University, Haidian District, Beijing, 100084, China
- Department
of Chemistry, Capital Normal University, Haidian District, Beijing, 100048 China
| | - Ludi Wang
- Department
of Chemistry, Capital Normal University, Haidian District, Beijing, 100048 China
- Beijing
National Laboratory for Molecular Sciences, Key Laboratory of Polymer
Chemistry and Physics of Ministry of Education, Centre for Soft Matter
Science and Engineering, College of Chemistry and Molecular Engineering, Peking University, Haidian District, Beijing, 100871, China
| | - Yu Kang
- Department
of Chemistry, Capital Normal University, Haidian District, Beijing, 100048 China
| | - Hong Cao
- Institute
of Nuclear and New Energy Technology, Tsinghua
University, Haidian District, Beijing, 100084, China
| | - Yaoyang Liu
- Institute
of Nuclear and New Energy Technology, Tsinghua
University, Haidian District, Beijing, 100084, China
| | - Qiange He
- Institute
of Nuclear and New Energy Technology, Tsinghua
University, Haidian District, Beijing, 100084, China
| | - Zhongfeng Li
- Department
of Chemistry, Capital Normal University, Haidian District, Beijing, 100048 China
| | - Xiaoyan Tang
- Beijing
National Laboratory for Molecular Sciences, Key Laboratory of Polymer
Chemistry and Physics of Ministry of Education, Centre for Soft Matter
Science and Engineering, College of Chemistry and Molecular Engineering, Peking University, Haidian District, Beijing, 100871, China
| | - Jing Chen
- Institute
of Nuclear and New Energy Technology, Tsinghua
University, Haidian District, Beijing, 100084, China
| | - Li Wang
- Department
of Chemistry, Capital Normal University, Haidian District, Beijing, 100048 China
| | - Chao Xu
- Institute
of Nuclear and New Energy Technology, Tsinghua
University, Haidian District, Beijing, 100084, China
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7
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Alasadi EA, Choi W, Chen X, Cotruvo JA, Baiz CR. Lanmodulin's EF 2-3 Domain: Insights from Infrared Spectroscopy and Simulations. ACS Chem Biol 2024; 19:1056-1065. [PMID: 38620063 DOI: 10.1021/acschembio.3c00789] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/17/2024]
Abstract
Lanmodulins are small, ∼110-residue proteins with four EF-hand motifs that demonstrate a picomolar affinity for lanthanide ions, making them efficient in the recovery and separation of these technologically important metals. In this study, we examine the thermodynamic and structural complexities of lanthanide ion binding to a 41-residue domain, EF 2-3, that constitutes the two highest-affinity metal-binding sites in the lanmodulin protein from Methylorubrum extorquens. Using a combination of circular dichroism (CD) spectroscopy, isothermal titration calorimetry (ITC), two-dimensional infrared (2D IR) spectroscopy, and molecular dynamics (MD) simulations, we characterize the metal binding capabilities of EF 2-3. ITC demonstrates that binding occurs between peptide and lanthanides with conditional dissociation constants (Kd) in the range 20-30 μM, with no significant differences in the Kd values for La3+, Eu3+, and Tb3+ at pH 7.4. In addition, CD spectroscopy suggests that only one binding site of EF 2-3 undergoes a significant conformational change in the presence of lanthanides. 2D IR spectroscopy demonstrates the presence of both mono- and bidentate binding configurations in EF 2-3 with all three lanthanides. MD simulations, supported by Eu3+ luminescence measurements, explore these results, suggesting a competition between water-lanthanide and carboxylate-lanthanide interactions in the EF 2-3 domain. These results underscore the role of the core helical bundle of the protein architecture in influencing binding affinities and communication between the metal-binding sites in the full-length protein.
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Affiliation(s)
- Eman A Alasadi
- Department of Chemistry, University of Texas at Austin, 105 E 24th St. A5300, Austin, Texas 78712, United States
| | - Wonseok Choi
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Xiaobing Chen
- Department of Chemistry, University of Texas at Austin, 105 E 24th St. A5300, Austin, Texas 78712, United States
| | - Joseph A Cotruvo
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Carlos R Baiz
- Department of Chemistry, University of Texas at Austin, 105 E 24th St. A5300, Austin, Texas 78712, United States
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8
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Hussain Z, Dwivedi D, Kwon I. Recovery of rare earth elements from low-grade coal fly ash using a recyclable protein biosorbent. Front Bioeng Biotechnol 2024; 12:1385845. [PMID: 38817924 PMCID: PMC11137179 DOI: 10.3389/fbioe.2024.1385845] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Accepted: 04/24/2024] [Indexed: 06/01/2024] Open
Abstract
Rare earth elements (REEs), including those in the lanthanide series, are crucial components essential for clean energy transitions, but they originate from geographically limited regions. Exploiting new and diverse supply sources is vital to facilitating a clean energy future. Hence, we explored the recovery of REEs from coal fly ash (FA), a complex, low-grade industrial feedstock that is currently underutilized (leachate concentrations of REEs in FA are < 0.003 mol%). Herein, we demonstrated the thermo-responsive genetically encoded REE-selective elastin-like polypeptides (RELPs) as a recyclable bioengineered protein adsorbent for the selective retrieval of REEs from coal fly ash over multiple cycles. The results showed that RELPs could be efficiently separated using temperature cycling and reused with high stability, as they retained ∼95% of their initial REE binding capacity even after four cycles. Moreover, RELPs selectively recovered high-purity REEs from the simulated solution containing one representative REE in the range of 0.0001-0.005 mol%, resulting in up to a 100,000-fold increase in REE purity. This study offers a sustainable approach to diversifying REE supplies by recovering REEs from low-grade coal fly ash in industrial wastes and provides a scientific basis for the extraction of high-purity REEs for industrial purposes.
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Affiliation(s)
| | | | - Inchan Kwon
- School of Materials Science and Engineering, Gwangju Institute of Science and Technology (GIST), Gwangju, Republic of Korea
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9
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Qian X, Ma C, Zhang H, Liu K. Bioseparation of rare earth elements and high value-added biomaterials applications. Bioorg Chem 2024; 143:107040. [PMID: 38141331 DOI: 10.1016/j.bioorg.2023.107040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 11/24/2023] [Accepted: 12/15/2023] [Indexed: 12/25/2023]
Abstract
Rare earth elements (REEs) are a group of critical minerals and extensively employed in new material manufacturing. However, separation of lanthanides is difficult because of their similar chemical natures. Current lanthanide leaching and separation methods require hazardous compounds, resulting in severe environmental concerns. Bioprocessing of lanthanides offers an emerging class of tools for REE separation due to mild leaching conditions and highly selective separation scenarios. In the course of biopreparation, engineered microbes not only dissolve REEs from ores but also allow for selective separation of the lanthanides. In this review, we present an overview of recent advances in microbes and proteins used for the biomanufacturing of lanthanides and discuss high value-added applications of REE-derived biomaterials. We begin by introducing the fundamental interactions between natural microbes and REEs. Then we discuss the rational design of chassis microbes for bioleaching and biosorption. We also highlight the investigations on REE binding proteins and their applications in the synthesis of high value-added biomaterials. Finally, future opportunities and challenges for the development of next generation lanthanide-binding biological systems are discussed.
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Affiliation(s)
- Xining Qian
- Engineering Research Center of Advanced Rare Earth Materials (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Chao Ma
- Engineering Research Center of Advanced Rare Earth Materials (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China; Xiangfu Laboratory, Building 5, No.828 Zhongxing Road, Xitang Town, Jiashan, Jiaxing, Zhejiang 314102, China.
| | - Hongjie Zhang
- Engineering Research Center of Advanced Rare Earth Materials (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China; Xiangfu Laboratory, Building 5, No.828 Zhongxing Road, Xitang Town, Jiashan, Jiaxing, Zhejiang 314102, China
| | - Kai Liu
- Engineering Research Center of Advanced Rare Earth Materials (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China; Xiangfu Laboratory, Building 5, No.828 Zhongxing Road, Xitang Town, Jiashan, Jiaxing, Zhejiang 314102, China
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10
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Behrsing T, Blair VL, Jaroschik F, Deacon GB, Junk PC. Rare Earths-The Answer to Everything. Molecules 2024; 29:688. [PMID: 38338432 PMCID: PMC10856286 DOI: 10.3390/molecules29030688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 01/24/2024] [Accepted: 01/27/2024] [Indexed: 02/12/2024] Open
Abstract
Rare earths, scandium, yttrium, and the fifteen lanthanoids from lanthanum to lutetium, are classified as critical metals because of their ubiquity in daily life. They are present in magnets in cars, especially electric cars; green electricity generating systems and computers; in steel manufacturing; in glass and light emission materials especially for safety lighting and lasers; in exhaust emission catalysts and supports; catalysts in artificial rubber production; in agriculture and animal husbandry; in health and especially cancer diagnosis and treatment; and in a variety of materials and electronic products essential to modern living. They have the potential to replace toxic chromates for corrosion inhibition, in magnetic refrigeration, a variety of new materials, and their role in agriculture may expand. This review examines their role in sustainability, the environment, recycling, corrosion inhibition, crop production, animal feedstocks, catalysis, health, and materials, as well as considering future uses.
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Affiliation(s)
- Thomas Behrsing
- School of Chemistry, Monash University, Melbourne, VIC 3800, Australia; (T.B.); (V.L.B.); (G.B.D.)
| | - Victoria L. Blair
- School of Chemistry, Monash University, Melbourne, VIC 3800, Australia; (T.B.); (V.L.B.); (G.B.D.)
| | | | - Glen B. Deacon
- School of Chemistry, Monash University, Melbourne, VIC 3800, Australia; (T.B.); (V.L.B.); (G.B.D.)
| | - Peter C. Junk
- College of Science & Engineering, James Cook University, Townsville, QLD 4811, Australia
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11
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Bowden G, Scott PJH, Boros E. Radiochemistry: A Hot Field with Opportunities for Cool Chemistry. ACS CENTRAL SCIENCE 2023; 9:2183-2195. [PMID: 38161375 PMCID: PMC10755734 DOI: 10.1021/acscentsci.3c01050] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/19/2023] [Revised: 10/20/2023] [Accepted: 10/24/2023] [Indexed: 01/03/2024]
Abstract
Recent Food and Drug Administration (FDA) approval of diagnostic and therapeutic radiopharmaceuticals and concurrent miniaturization of particle accelerators leading to improved access has fueled interest in the development of chemical transformations suitable for short-lived radioactive isotopes on the tracer scale. This recent renaissance of radiochemistry is paired with new opportunities to study fundamental chemical behavior and reactivity of elements to improve their production, separation, and incorporation into bioactive molecules to generate new radiopharmaceuticals. This outlook outlines pertinent challenges in the field of radiochemistry and indicates areas of opportunity for chemical discovery and development, including those of clinically established (C-11, F-18) and experimental radionuclides in preclinical development across the periodic table.
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Affiliation(s)
- Gregory
D. Bowden
- Department
of Radiology, University of Michigan, 1301 Catherine, Ann Arbor, Michigan 48109, United States
- Werner
Siemens Imaging Center, Department of Preclinical Imaging and Radiopharmacy, Eberhard Karls University Tuebingen, 72074 Tuebingen, Germany
- Cluster
of Excellence iFIT (EXC 2180) “Image Guided and Functionally
Instructed Tumor Therapies”, Eberhard
Karls University of Tuebingen, 72074 Tuebingen, Germany
| | - Peter J. H. Scott
- Department
of Radiology, University of Michigan, 1301 Catherine, Ann Arbor, Michigan 48109, United States
| | - Eszter Boros
- Department
of Chemistry, University of Wisconsin, 1101 University Avenue, Madison, Wisconsin 53706, United States
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12
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Larrinaga WB, Cotruvo JA, Worrell BT, Eaton SS, Eaton GR. Electron Paramagnetic Resonance, Electronic Ground State, and Electron Spin Relaxation of Seven Lanthanide Ions Bound to Lanmodulin and the Bioinspired Chelator, 3,4,3-LI(1,2-HOPO). Chemistry 2023; 29:e202303215. [PMID: 37802965 DOI: 10.1002/chem.202303215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2023] [Revised: 10/05/2023] [Accepted: 10/06/2023] [Indexed: 10/08/2023]
Abstract
The electron paramagnetic resonance (EPR) spectra of lanthanide(III) ions besides Gd3+ , bound to small-molecule and protein chelators, are uncharacterized. Here, the EPR properties of 7 lanthanide(III) ions bound to the natural lanthanide-binding protein, lanmodulin (LanM), and the synthetic small-molecule chelator, 3,4,3-LI(1,2-HOPO) ("HOPO"), were systematically investigated. Echo-detected pulsed EPR spectra reveal intense signals from ions for which the normal continuous-wave first-derivative spectra are negligibly different from zero. Spectra of Kramers lanthanide ions Ce3+ , Nd3+ , Sm3+ , Er3+ , and Yb3+ , and non-Kramers Tb3+ and Tm3+ , bound to LanM are more similar to the ions in dilute aqueous:ethanol solution than to those coordinated with HOPO. Lanmodulins from two bacteria, with distinct metal-binding sites, had similar spectra for Tb3+ but different spectra for Nd3+ . Spin echo dephasing rates (1/Tm ) are faster for lanthanides than for most transition metals and limited detection of echoes to temperatures below ~6 to 12 K. Dephasing rates were environment dependent and decreased in the order water:ethanol>LanM>HOPO, which is attributed to decreasing librational motion. These results demonstrate that the EPR spectra and relaxation times of lanthanide(III) ions are sensitive to coordination environment, motivating wider application of these methods for characterization of both small-molecule and biomolecule interactions with lanthanides.
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Affiliation(s)
- Wyatt B Larrinaga
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania, 16802, United States
| | - Joseph A Cotruvo
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania, 16802, United States
| | - Brady T Worrell
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado, 80208, United States
| | - Sandra S Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado, 80208, United States
| | - Gareth R Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado, 80208, United States
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13
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Deblonde GJP, Morrison K, Mattocks JA, Cotruvo JA, Zavarin M, Kersting AB. Impact of a Biological Chelator, Lanmodulin, on Minor Actinide Aqueous Speciation and Transport in the Environment. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:20830-20843. [PMID: 37897703 DOI: 10.1021/acs.est.3c06033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/30/2023]
Abstract
Minor actinides are major contributors to the long-term radiotoxicity of nuclear fuels and other radioactive wastes. In this context, understanding their interactions with natural chelators and minerals is key to evaluating their transport behavior in the environment. The lanmodulin family of metalloproteins is produced by ubiquitous bacteria and Methylorubrum extorquens lanmodulin (LanM) was recently identified as one of nature's most selective chelators for trivalent f-elements. Herein, we investigated the behavior of neptunium, americium, and curium in the presence of LanM, carbonate ions, and common minerals (calcite, montmorillonite, quartz, and kaolinite). We show that LanM's aqueous complexes with Am(III) and Cm(III) remain stable in carbonate-bicarbonate solutions. Furthermore, the sorption of Am(III) to these minerals is strongly impacted by LanM, while Np(V) sorption is not. With calcite, even a submicromolar concentration of LanM leads to a significant reduction in the Am(III) distribution coefficient (Kd, from >104 to ∼102 mL/g at pH 8.5), rendering it even more mobile than Np(V). Thus, LanM-type chelators can potentially increase the mobility of trivalent actinides and lanthanide fission products under environmentally relevant conditions. Monitoring biological chelators, including metalloproteins, and their biogenerators should therefore be considered during the evaluation of radioactive waste repository sites and the risk assessment of contaminated sites.
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Affiliation(s)
- Gauthier J-P Deblonde
- Physical and Life Sciences Directorate, Nuclear and Chemical Sciences Division, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
- Glenn T. Seaborg Institute, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Keith Morrison
- Physical and Life Sciences Directorate, Nuclear and Chemical Sciences Division, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
- Glenn T. Seaborg Institute, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Joseph A Mattocks
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Joseph A Cotruvo
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Mavrik Zavarin
- Glenn T. Seaborg Institute, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Annie B Kersting
- Glenn T. Seaborg Institute, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
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14
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Chen J, Shi W, Ren Y, Zhao K, Liu Y, Jia B, Zhao L, Li M, Liu Y, Su J, Ma C, Wang F, Sun J, Tian Y, Li J, Zhang H, Liu K. Strong Protein Adhesives through Lanthanide-enhanced Structure Folding and Stack Density. Angew Chem Int Ed Engl 2023; 62:e202304483. [PMID: 37670725 DOI: 10.1002/anie.202304483] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Revised: 09/03/2023] [Accepted: 09/05/2023] [Indexed: 09/07/2023]
Abstract
Generating strong adhesion by engineered proteins has the potential for high technical applications. Current studies of adhesive proteins are primarily limited to marine organisms, e.g., mussel adhesive proteins. Here, we present a modular engineering strategy to generate a type of exotic protein adhesives with super strong adhesion behaviors. In the protein complexes, the lanmodulin (LanM) underwent α-helical conformational transition induced by lanthanides, thereby enhancing the stacking density and molecular interactions of adhesive protein. The resulting adhesives exhibited outstanding lap-shear strength of ≈31.7 MPa, surpassing many supramolecular and polymer adhesives. The extreme temperature (-196 to 200 °C) resistance capacity and underwater adhesion performance can significantly broaden their practical application scenarios. Ex vivo and in vivo experiments further demonstrated the persistent adhesion performance for surgical sealing and healing applications.
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Affiliation(s)
- Jing Chen
- Engineering Research Center of Advanced Rare Earth Materials, Ministry of Education), Department of Chemistry, Tsinghua University, Beijing, 100084, China
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
- National Engineering Laboratory for AIDS Vaccine, School of Life Sciences, Jilin University, Changchun, 130012, China
| | - Weiwei Shi
- Engineering Research Center of Advanced Rare Earth Materials, Ministry of Education), Department of Chemistry, Tsinghua University, Beijing, 100084, China
| | - Yubin Ren
- Engineering Research Center of Advanced Rare Earth Materials, Ministry of Education), Department of Chemistry, Tsinghua University, Beijing, 100084, China
| | - Kelu Zhao
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
| | - Yangyi Liu
- Engineering Research Center of Advanced Rare Earth Materials, Ministry of Education), Department of Chemistry, Tsinghua University, Beijing, 100084, China
- College of Materials Science and Opto-Electronic Technology, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Bo Jia
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
| | - Lai Zhao
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
| | - Ming Li
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
| | - Yawei Liu
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
| | - Juanjuan Su
- College of Materials Science and Opto-Electronic Technology, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Chao Ma
- Engineering Research Center of Advanced Rare Earth Materials, Ministry of Education), Department of Chemistry, Tsinghua University, Beijing, 100084, China
| | - Fan Wang
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
| | - Jing Sun
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, 200241, China
| | - Yang Tian
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, 200241, China
| | - Jingjing Li
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
| | - Hongjie Zhang
- Engineering Research Center of Advanced Rare Earth Materials, Ministry of Education), Department of Chemistry, Tsinghua University, Beijing, 100084, China
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
- Xiangfu Laboratory, Jiaxing, 314102, China
| | - Kai Liu
- Engineering Research Center of Advanced Rare Earth Materials, Ministry of Education), Department of Chemistry, Tsinghua University, Beijing, 100084, China
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, 130022, China
- Xiangfu Laboratory, Jiaxing, 314102, China
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15
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Diep P, Kell B, Yakunin A, Hilfinger A, Mahadevan R. Quantifying metal-binding specificity of CcNikZ-II from Clostridium carboxidivorans in the presence of competing metal ions. Anal Biochem 2023; 676:115182. [PMID: 37355028 DOI: 10.1016/j.ab.2023.115182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2023] [Revised: 04/25/2023] [Accepted: 05/08/2023] [Indexed: 06/26/2023]
Abstract
Many proteins bind transition metal ions as cofactors to carry out their biological functions. Despite binding affinities for divalent transition metal ions being predominantly dictated by the Irving-Williams series for wild-type proteins, in vivo metal ion binding specificity is ensured by intracellular mechanisms that regulate free metal ion concentrations. However, a growing area of biotechnology research considers the use of metal-binding proteins in vitro to purify specific metal ions from wastewater, where specificity is dictated by the protein's metal binding affinities. A goal of metalloprotein engineering is to modulate these affinities to improve a protein's specificity towards a particular metal; however, the quantitative relationship between the affinities and the equilibrium metal-bound protein fractions depends on the underlying binding mechanisms. Here we demonstrate a high-throughput intrinsic tryptophan fluorescence quenching method to validate binding models in multi-metal solutions for CcNikZ-II, a nickel-binding protein from Clostridium carboxidivorans. Using our validated models, we quantify the relationship between binding affinity and specificity in different classes of metal-binding models for CcNikZ-II. We further illustrate the potential relevance of data-informed models to predicting engineering targets for improved specificity.
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Affiliation(s)
- Patrick Diep
- BioZone Centre for Applied Bioscience and Bioengineering, Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada; Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.
| | - Brayden Kell
- Department of Physics, University of Toronto, Toronto, ON, Canada; Department of Chemical and Physical Sciences, University of Toronto Mississauga, Mississauga, ON, Canada; Department of Molecular Biosciences, Northwestern University, Evanston, IL, USA; NSF-Simons Center for Quantitative Biology, Northwestern University, Evanston, IL, USA
| | - Alexander Yakunin
- BioZone Centre for Applied Bioscience and Bioengineering, Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada; Centre for Environmental Biotechnology, School of Natural Sciences, Bangor University, Bangor, Gwynedd, UK
| | - Andreas Hilfinger
- Department of Physics, University of Toronto, Toronto, ON, Canada; Department of Chemical and Physical Sciences, University of Toronto Mississauga, Mississauga, ON, Canada; Department of Mathematics, University of Toronto, Toronto, ON, Canada; Department of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada
| | - Radhakrishnan Mahadevan
- BioZone Centre for Applied Bioscience and Bioengineering, Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, ON, Canada; Institute for Biomedical Engineering, University of Toronto, Toronto, ON, Canada
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16
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Martin KE, Mattocks JA, Śmiłowicz D, Aluicio-Sarduy E, Whetter JN, Engle JW, Cotruvo JA, Boros E. Radiolabeling and in vivo evaluation of lanmodulin with biomedically relevant lanthanide isotopes. RSC Chem Biol 2023; 4:414-421. [PMID: 37292057 PMCID: PMC10246553 DOI: 10.1039/d3cb00020f] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Accepted: 04/04/2023] [Indexed: 06/10/2023] Open
Abstract
Short-lived, radioactive lanthanides comprise an emerging class of radioisotopes attractive for biomedical imaging and therapy applications. To deliver such isotopes to target tissues, they must be appended to entities that target antigens overexpressed on the target cell's surface. However, the thermally sensitive nature of biomolecule-derived targeting vectors requires the incorporation of these isotopes without the use of denaturing temperatures or extreme pH conditions; chelating systems that can capture large radioisotopes under mild conditions are therefore highly desirable. Herein, we demonstrate the successful radiolabeling of the lanthanide-binding protein, lanmodulin (LanM), with medicinally relevant radioisotopes: 177Lu, 132/135La and 89Zr. Radiolabeling of the endogenous metal-binding sites of LanM, as well exogenous labeling of a protein-appended chelator, was successfully conducted at 25 °C and pH 7 with radiochemical yields ranging from 20-82%. The corresponding radiolabeled constructs possess good formulation stability in pH 7 MOPS buffer over 24 hours (>98%) in the presence of 2 equivalents of natLa carrier. In vivo experiments with [177Lu]-LanM, [132/135La]-LanM, and a prostate cancer targeting-vector linked conjugate, [132/135La]-LanM-PSMA, reveal that endogenously labeled constructs produce bone uptake in vivo. Exogenous, chelator-tag mediated radiolabeling to produce [89Zr]-DFO-LanM enables further study of the protein's in vivo behavior, demonstrating low bone and liver uptake, and renal clearance of the protein itself. While these results indicate that additional stabilization of LanM is required, this study establishes precedence for the radiochemical labeling of LanM with medically relevant lanthanide radioisotopes.
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Affiliation(s)
- Kirsten E Martin
- Department of Chemistry, Stony Brook University, Stony Brook New York 11794 USA
| | - Joseph A Mattocks
- Department of Chemistry, The Pennsylvania State University, University Park Pennsylvania 16802 USA
| | - Dariusz Śmiłowicz
- Department of Chemistry, Stony Brook University, Stony Brook New York 11794 USA
| | - Eduardo Aluicio-Sarduy
- Department of Medical Physics, University of Wisconsin Madison Wisconsin 53705 USA
- Department of Radiology, University of Wisconsin Madison Wisconsin 53705 USA
| | - Jennifer N Whetter
- Department of Chemistry, Stony Brook University, Stony Brook New York 11794 USA
| | - Jonathan W Engle
- Department of Medical Physics, University of Wisconsin Madison Wisconsin 53705 USA
- Department of Radiology, University of Wisconsin Madison Wisconsin 53705 USA
| | - Joseph A Cotruvo
- Department of Chemistry, The Pennsylvania State University, University Park Pennsylvania 16802 USA
| | - Eszter Boros
- Department of Chemistry, Stony Brook University, Stony Brook New York 11794 USA
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17
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Mattocks JA, Jung JJ, Lin CY, Dong Z, Yennawar NH, Featherston ER, Kang-Yun CS, Hamilton TA, Park DM, Boal AK, Cotruvo JA. Enhanced rare-earth separation with a metal-sensitive lanmodulin dimer. Nature 2023; 618:87-93. [PMID: 37259003 PMCID: PMC10232371 DOI: 10.1038/s41586-023-05945-5] [Citation(s) in RCA: 61] [Impact Index Per Article: 30.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2022] [Accepted: 03/13/2023] [Indexed: 06/02/2023]
Abstract
Technologically critical rare-earth elements are notoriously difficult to separate, owing to their subtle differences in ionic radius and coordination number1-3. The natural lanthanide-binding protein lanmodulin (LanM)4,5 is a sustainable alternative to conventional solvent-extraction-based separation6. Here we characterize a new LanM, from Hansschlegelia quercus (Hans-LanM), with an oligomeric state sensitive to rare-earth ionic radius, the lanthanum(III)-induced dimer being >100-fold tighter than the dysprosium(III)-induced dimer. X-ray crystal structures illustrate how picometre-scale differences in radius between lanthanum(III) and dysprosium(III) are propagated to Hans-LanM's quaternary structure through a carboxylate shift that rearranges a second-sphere hydrogen-bonding network. Comparison to the prototypal LanM from Methylorubrum extorquens reveals distinct metal coordination strategies, rationalizing Hans-LanM's greater selectivity within the rare-earth elements. Finally, structure-guided mutagenesis of a key residue at the Hans-LanM dimer interface modulates dimerization in solution and enables single-stage, column-based separation of a neodymium(III)/dysprosium(III) mixture to >98% individual element purities. This work showcases the natural diversity of selective lanthanide recognition motifs, and it reveals rare-earth-sensitive dimerization as a biological principle by which to tune the performance of biomolecule-based separation processes.
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Affiliation(s)
- Joseph A Mattocks
- Department of Chemistry, The Pennsylvania State University, University Park, PA, USA
| | - Jonathan J Jung
- Department of Chemistry, The Pennsylvania State University, University Park, PA, USA
| | - Chi-Yun Lin
- Department of Chemistry, The Pennsylvania State University, University Park, PA, USA
| | - Ziye Dong
- Critical Materials Institute, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA
| | - Neela H Yennawar
- The Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, USA
| | - Emily R Featherston
- Department of Chemistry, The Pennsylvania State University, University Park, PA, USA
| | - Christina S Kang-Yun
- Critical Materials Institute, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA
| | - Timothy A Hamilton
- Department of Chemistry, The Pennsylvania State University, University Park, PA, USA
| | - Dan M Park
- Critical Materials Institute, Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.
| | - Amie K Boal
- Department of Chemistry, The Pennsylvania State University, University Park, PA, USA.
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA.
| | - Joseph A Cotruvo
- Department of Chemistry, The Pennsylvania State University, University Park, PA, USA.
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18
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Nikolova V, Kircheva N, Dobrev S, Angelova S, Dudev T. Lanthanides as Calcium Mimetic Species in Calcium-Signaling/Buffering Proteins: The Effect of Lanthanide Type on the Ca2+/Ln3+ Competition. Int J Mol Sci 2023; 24:ijms24076297. [PMID: 37047269 PMCID: PMC10094714 DOI: 10.3390/ijms24076297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 03/22/2023] [Accepted: 03/24/2023] [Indexed: 03/30/2023] Open
Abstract
Lanthanides, the 14 4f-block elements plus Lanthanum, have been extensively used to study the structure and biochemical properties of metalloproteins. The characteristics of lanthanides within the lanthanide series are similar, but not identical. The present research offers a systematic investigation of the ability of the entire Ln3+ series to substitute for Ca2+ in biological systems. A well-calibrated DFT/PCM protocol is employed in studying the factors that control the metal selectivity in biological systems by modeling typical calcium signaling/buffering binding sites and elucidating the thermodynamic outcome of the competition between the “alien” La3+/Ln3+ and “native” Ca2+, and La3+ − Ln3+ within the lanthanide series. The calculations performed reveal that the major determinant of the Ca2+/Ln3+ selectivity in calcium proteins is the net charge of the calcium binding pocket; the more negative the charge, the higher the competitiveness of the trivalent Ln3+ with respect to its Ca2+ contender. Solvent exposure of the binding site also influences the process; buried active centers with net charge of −4 or −3 are characterized by higher Ln3+ over Ca2+ selectivity, whereas it is the opposite for sites with overall charge of −1. Within the series, the competition between La3+ and its fellow lanthanides is determined by the balance between two competing effects: electronic (favoring heavier lanthanides) and solvation (generally favoring the lighter lanthanides).
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Affiliation(s)
- Valya Nikolova
- Faculty of Chemistry and Pharmacy, Sofia University “St. Kliment Ohridski”, 1164 Sofia, Bulgaria
| | - Nikoleta Kircheva
- Institute of Optical Materials and Technologies “Acad. J. Malinowski”, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria
| | - Stefan Dobrev
- Institute of Optical Materials and Technologies “Acad. J. Malinowski”, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria
| | - Silvia Angelova
- Institute of Optical Materials and Technologies “Acad. J. Malinowski”, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria
| | - Todor Dudev
- Faculty of Chemistry and Pharmacy, Sofia University “St. Kliment Ohridski”, 1164 Sofia, Bulgaria
- Correspondence:
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19
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Lee HD, Grady CJ, Krell K, Strebeck C, Good NM, Martinez-Gomez NC, Gilad AA. A Novel Protein for the Bioremediation of Gadolinium Waste. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.01.05.522788. [PMID: 36711778 PMCID: PMC9881998 DOI: 10.1101/2023.01.05.522788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Several hundreds of tons of gadolinium-based contrast agents (GBCAs) are being dumped into the environment every year. Although macrocyclic GBCAs exhibit superior stability compared to their linear counterparts, we have found that the structural integrity of chelates are susceptible to ultraviolet light, regardless of configuration. In this study, we present a synthetic protein termed GLamouR that binds and reports gadolinium in an intensiometric manner. We then explore the extraction of gadolinium from GBCA-spiked artificial urine samples and investigate if the low picomolar concentrations reported in gadolinium-contaminated water sources pose a barrier for bioremediation. Based on promising results, we anticipate GLamouR can be used for detecting and mining REEs beyond gadolinium as well and hope to expand the biological toolbox for such applications.
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Affiliation(s)
- Harvey D. Lee
- Department of Biomedical Engineering, Michigan State University, East Lansing, MI, United States
| | - Connor J. Grady
- Department of Biomedical Engineering, Michigan State University, East Lansing, MI, United States
| | - Katie Krell
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, United States
| | - Cooper Strebeck
- Department of Mechanical Engineering, Michigan State University, East Lansing, MI, United States
| | - Nathan M. Good
- Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA, United States
| | - N. Cecilia Martinez-Gomez
- Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA, United States
| | - Assaf A. Gilad
- Department of Radiology, Michigan State University, East Lansing, MI, United States
- Department of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI, United States
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20
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Park J, Cleary MB, Li D, Mattocks JA, Xu J, Wang H, Mukhopadhyay S, Gale EM, Cotruvo JA. A genetically encoded fluorescent sensor for manganese(II), engineered from lanmodulin. Proc Natl Acad Sci U S A 2022; 119:e2212723119. [PMID: 36508659 PMCID: PMC9907080 DOI: 10.1073/pnas.2212723119] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Accepted: 11/10/2022] [Indexed: 12/15/2022] Open
Abstract
The design of selective metal-binding sites is a challenge in both small-molecule and macromolecular chemistry. Selective recognition of manganese (II)-the first-row transition metal ion that tends to bind with the lowest affinity to ligands, as described by the Irving-Williams series-is particularly difficult. As a result, there is a dearth of chemical biology tools with which to study manganese physiology in live cells, which would advance understanding of photosynthesis, host-pathogen interactions, and neurobiology. Here we report the rational re-engineering of the lanthanide-binding protein, lanmodulin, into genetically encoded fluorescent sensors for MnII, MnLaMP1 and MnLaMP2. These sensors with effective Kd(MnII) of 29 and 7 µM, respectively, defy the Irving-Williams series to selectively detect MnII in vitro and in vivo. We apply both sensors to visualize kinetics of bacterial labile manganese pools. Biophysical studies indicate the importance of coordinated solvent and hydrophobic interactions in the sensors' selectivity. Our results establish lanmodulin as a versatile scaffold for design of selective protein-based biosensors and chelators for metals beyond the f-block.
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Affiliation(s)
- Jennifer Park
- Department of Chemistry, The Pennsylvania State University, University Park, PA16802
| | - Michael B. Cleary
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital / Harvard Medical School, Charlestown, MA02129
| | - Danyang Li
- Division of Pharmacology and Toxicology, College of Pharmacy, Institute for Cellular and Molecular Biology, and Institute for Neuroscience, The University of Texas at Austin, Austin, TX78712
| | - Joseph A. Mattocks
- Department of Chemistry, The Pennsylvania State University, University Park, PA16802
| | - Jiansong Xu
- Department of Chemistry, The Pennsylvania State University, University Park, PA16802
| | - Huan Wang
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital / Harvard Medical School, Charlestown, MA02129
| | - Somshuvra Mukhopadhyay
- Division of Pharmacology and Toxicology, College of Pharmacy, Institute for Cellular and Molecular Biology, and Institute for Neuroscience, The University of Texas at Austin, Austin, TX78712
| | - Eric M. Gale
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital / Harvard Medical School, Charlestown, MA02129
| | - Joseph A. Cotruvo
- Department of Chemistry, The Pennsylvania State University, University Park, PA16802
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