1
|
Gómez-Gras D, Linares C, Viladrich N, Zentner Y, Grinyó J, Gori A, McFadden CS, Fabricius KE, Madin JS. The Octocoral Trait Database: a global database of trait information for octocoral species. Sci Data 2025; 12:82. [PMID: 39814778 PMCID: PMC11735844 DOI: 10.1038/s41597-024-04307-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2024] [Accepted: 12/16/2024] [Indexed: 01/18/2025] Open
Abstract
Trait-based approaches are revolutionizing our understanding of high-diversity ecosystems by providing insights into the principles underlying key ecological processes, such as community assembly, species distribution, resilience, and the relationship between biodiversity and ecosystem functioning. In 2016, the Coral Trait Database advanced coral reef science by centralizing trait information for stony corals (i.e., Subphylum Anthozoa, Class Hexacorallia, Order Scleractinia). However, the absence of trait data for soft corals, gorgonians, and sea pens (i.e., Class Octocorallia) limits our understanding of ecosystems where these organisms are significant members and play pivotal roles. To address this gap, we introduce the Octocoral Trait Database, a global, open-source database of curated trait data for octocorals. This database houses species- and individual-level data, complemented by contextual information that provides a relevant framework for analyses. The inaugural dataset, OctocoralTraits v2.2, contains over 97,500 global trait observations across 98 traits and over 3,500 species. The database aims to evolve into a steadily growing, community-led resource that advances future marine science, with a particular emphasis on coral reef research.
Collapse
Affiliation(s)
- D Gómez-Gras
- Hawai'i Institute of Marine Biology, University of Hawai'i at Mānoa, Kāne'ohe, Hawai'i, USA.
- Departament Evolutionary Biology, Ecology and Environmental Sciences, Universitat de Barcelona (UB), Barcelona, Spain.
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain.
| | - C Linares
- Departament Evolutionary Biology, Ecology and Environmental Sciences, Universitat de Barcelona (UB), Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain
| | - N Viladrich
- Departament Evolutionary Biology, Ecology and Environmental Sciences, Universitat de Barcelona (UB), Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain
| | - Y Zentner
- Departament Evolutionary Biology, Ecology and Environmental Sciences, Universitat de Barcelona (UB), Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain
| | - J Grinyó
- Institut de Ciències Del Mar (ICM-CSIC), Barcelona, Spain
- Department of Ocean System Sciences, NIOZ Royal Netherlands Institute for Sea Research and Utrecht University, Den Burg, the Netherlands
| | - A Gori
- Departament Evolutionary Biology, Ecology and Environmental Sciences, Universitat de Barcelona (UB), Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain
| | - C S McFadden
- Department of Biology, Harvey Mudd College, Claremont, California, USA
| | - K E Fabricius
- Australian Institute of Marine Science, Townsville, Queensland, Australia
| | - J S Madin
- Hawai'i Institute of Marine Biology, University of Hawai'i at Mānoa, Kāne'ohe, Hawai'i, USA
| |
Collapse
|
2
|
Lau YW, Reimer JD. A first phylogenetic study on stoloniferous octocorals off the coast of Kota Kinabalu, Sabah, Malaysia, with the description of two new genera and five new species. Zookeys 2019; 872:127-158. [PMID: 31528119 PMCID: PMC6718372 DOI: 10.3897/zookeys.872.36288] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2019] [Accepted: 07/12/2019] [Indexed: 11/12/2022] Open
Abstract
Sabah, Malaysia, is well known for its extensive and diverse coral reefs. It is located on the northwestern edge of the Coral Triangle, the region with the highest marine biodiversity. Much of the marine fauna here is still unknown, especially inconspicuous animals, such as small stoloniferous octocorals, which are common on coral reefs. Here, we describe two new monospecific genera of the family Arulidae found off the coast of Kota Kinabalu, Sabah, East Malaysia; Bunga payung gen. nov. et sp. nov. and Laeta waheedae gen. nov. et sp. nov. As well, the stoloniferan genus Phenganax Alderslade & McFadden, 2011 belonging to the family Clavulariidae is expanded with three new species, P. marumi sp. nov., P. subtilis sp. nov., and P. stokvisi sp. nov., which are all sclerite-free. Additionally, we report a possibly undescribed species, closely related to the clavulariid genera Azoriella Lopez-Gonzalez & Gili, 2001 and Cervera Lopez-Gonzalez et al., 1995. As this and other recent studies have shown, discoveries of small stoloniferous octocorals are helping to fill gaps in our knowledge of the overall systematics of Octocorallia.
Collapse
Affiliation(s)
- Yee Wah Lau
- Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, JapanUniversity of the RyukyusNishiharaJapan
| | - James D. Reimer
- Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, JapanUniversity of the RyukyusNishiharaJapan
- Tropical Biosphere Research Center, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, JapanUniversity of the RyukyusNishiharaJapan
| |
Collapse
|
3
|
Lau YW, Stokvis FR, van Ofwegen LP, Reimer JD. Stolonifera from shallow waters in the north-western Pacific: a description of a new genus and two new species within the Arulidae (Anthozoa, Octocorallia). Zookeys 2018; 790:1-19. [PMID: 30364726 PMCID: PMC6198026 DOI: 10.3897/zookeys.790.28875] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2018] [Accepted: 09/10/2018] [Indexed: 11/12/2022] Open
Abstract
A new genus and two new species of stoloniferous octocorals (Alcyonacea) within the family Arulidae are described based on specimens collected from Okinawa (Japan), Palau and Dongsha Atoll (Taiwan). Hana gen. n. is erected within Arulidae. Hanahanagasa sp. n. is characterised by large spindle-like table-radiates and Hanahanataba sp. n. is characterised by having ornamented rods. The distinction of these new taxa is also supported by molecular phylogenetic analyses. The support values resulting from maximum likelihood and Bayesian inference analyses for the genus Hana and new species H.hanagasa and H.hanataba are 82/1.0, 97/1.0 and 61/0.98, respectively. Hanahanagasa sp. n. and Hanahanataba sp. n. are the first arulid records for Okinawa, Palau, and Dongsha Atoll, and represent species of the second genus within the family Arulidae.
Collapse
Affiliation(s)
- Yee Wah Lau
- Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0123, Japan
| | | | | | - James Davis Reimer
- Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0123, Japan
- Tropical Biosphere Research Center, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0123, Japan
| |
Collapse
|