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Yang Y, Zhao Y, Pan M, Yu Y, Guo Y, Ge Q, Hao W. Physiology and transcriptome analysis of Artemisia argyi adaptation and accumulation to soil cadmium. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2024; 278:116397. [PMID: 38714088 DOI: 10.1016/j.ecoenv.2024.116397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Revised: 04/16/2024] [Accepted: 04/23/2024] [Indexed: 05/09/2024]
Abstract
The soil pollution caused by cadmium (Cd) poses a significant threat to the environment. Therefore, identifying plants that can effectively remediate Cd-contaminated soils is urgently needed. In this study, physiological, cytological, and transcriptome analyses were performed to comprehensively understand the changes in Artemisia argyi under Cd stress. Physiological and cytological analyses indicated that A. argyi maintained normal growth with intact cell structure under Cd stress levels up to 10 mg/kg. Cytological analysis showed that Cd precipitation in leaf cells occurred in the cytoplasm and intercellular spaces. As the levels of Cd stress increased, proline accumulation in leaves increased, whereas soluble protein and soluble sugar initially increased, followed by a subsequent decline. The translocation factor was above 1 under 0.6 mg/kg Cd stress but decreased when it exceeded this concentration. Transcriptome analyses revealed several crucial Cd-influenced pathways, including amino acid, terpenoid, flavonoid, and sugar metabolisms. This study not only proved that A. argyi could enrich Cd in soil but also revealed the response of A. argyi to Cd and its resistance mechanisms, which provided insight into the cleaner production of A. argyi and the remediation of Cd-contaminated soil.
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Affiliation(s)
- Yingbin Yang
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yinghui Zhao
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Meiqi Pan
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yaxin Yu
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yu Guo
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Qing Ge
- College of Enology, Northwest A&F University, Yangling, Shaanxi 712100, China.
| | - Wenfang Hao
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China.
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Zhang D, Wang H, Zhang Y, Su Z, Hu T, Liu J, Ding Q, Niu N, Ma L. Methyl jasmonate enhances the safe production ability of Cd-stressed wheat by regulating the antioxidant capacity, Cd absorption, and distribution in wheat. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 212:108788. [PMID: 38830276 DOI: 10.1016/j.plaphy.2024.108788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2023] [Revised: 01/24/2024] [Accepted: 05/29/2024] [Indexed: 06/05/2024]
Abstract
Identifying green and effective measures for reducing wheat Cd toxicity and grain Cd accumulation is crucial. This study used seedling sand culture and full-grown pot experiments of wheat cultivars 'Luomai23' (LM) and 'Zhongyu10' (ZY). The purpose was to determine the effects of exogenous MeJA on the phenotype, photosynthesis, antioxidant system, Cd accumulation and distribution, transporter gene expression, and cell wall properties of Cd-stressed wheat. Compared with Cd treatment alone, the plant height and maximum root length treated with 0.001 μM MeJA increased by more than 6.3% and 16.6%, respectively. Under 5 mg⋅kg-1 Cd treatment, spraying 10 μM MeJA increased the photosynthetic rate of LM and ZY by 23.5% and 35.8% at the filling stage, respectively. Methyl jasmonate significantly reduced the H2O2 and MDA contents by increasing the activities of POD, DHAR, MDHAR, and GR and the contents of AsA and GSH. Applicating MeJA increased the content of chelate substances, cell wall polysaccharides, and cell wall functional groups. Besides, MeJA regulated the expression of Cd transporter genes, with shoot and root Cd content decreasing by 46.7% and 27.9% in LM, respectively. Spraying 10 μM MeJA reduced Cd absorption and translocation from vegetative organs to grains, thus reducing the grain Cd content of LM and ZY by 36.1 and 39.9% under 5 mg⋅kg-1 Cd treatment, respectively. Overexpressing TaJMT significantly increased the MeJA content and Cd tolerance of Arabidopsis. These results have improved the understanding of the mechanism through which MeJA alleviates Cd toxicity and reduces Cd accumulation in wheat.
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Affiliation(s)
- Dazhong Zhang
- College of Agronomy, Northwest A&F University, Yangling, 712100, China; Henan Provincial Key Laboratory of Hybrid Wheat, School of Agriculture, Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003, China
| | - Hairong Wang
- College of Agronomy, Northwest A&F University, Yangling, 712100, China
| | - Yuanbo Zhang
- College of Agronomy, Northwest A&F University, Yangling, 712100, China
| | - Zhan Su
- College of Agronomy, Northwest A&F University, Yangling, 712100, China
| | - Tiezhu Hu
- Henan Provincial Key Laboratory of Hybrid Wheat, School of Agriculture, Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003, China
| | - Jiajia Liu
- Henan Provincial Key Laboratory of Hybrid Wheat, School of Agriculture, Henan Institute of Science and Technology/Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, 453003, China
| | - Qin Ding
- College of Horticulture, Northwest A&F University, Yangling, 712100, China
| | - Na Niu
- College of Agronomy, Northwest A&F University, Yangling, 712100, China
| | - Lingjian Ma
- College of Agronomy, Northwest A&F University, Yangling, 712100, China.
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Hurrah IM, Kumar A, Abbas N. Functional characterisation of Artemisia annua jasmonic acid carboxyl methyltransferase: a key enzyme enhancing artemisinin biosynthesis. PLANTA 2024; 259:152. [PMID: 38735012 DOI: 10.1007/s00425-024-04433-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Accepted: 05/04/2024] [Indexed: 05/13/2024]
Abstract
MAIN CONCLUSION Overexpression of Artemisia annua jasmonic acid carboxyl methyltransferase (AaJMT) leads to enhanced artemisinin content in Artemisia annua. Artemisinin-based combination therapies remain the sole deterrent against deadly disease malaria and Artemisia annua remains the only natural producer of artemisinin. In this study, the 1101 bp gene S-adenosyl-L-methionine (SAM): Artemisia annua jasmonic acid carboxyl methyltransferase (AaJMT), was characterised from A. annua, which converts jasmonic acid (JA) to methyl jasmonate (MeJA). From phylogenetic analysis, we confirmed that AaJMT shares a common ancestor with Arabidopsis thaliana, Eutrema japonica and has a close homology with JMT of Camellia sinensis. Further, the Clustal Omega depicted that the conserved motif I, motif III and motif SSSS (serine) required to bind SAM and JA, respectively, are present in AaJMT. The relative expression of AaJMT was induced by wounding, MeJA and salicylic acid (SA) treatments. Additionally, we found that the recombinant AaJMT protein catalyses the synthesis of MeJA from JA with a Km value of 37.16 µM. Moreover, site-directed mutagenesis of serine-151 in motif SSSS to tyrosine, asparagine-10 to threonine and glutamine-25 to histidine abolished the enzyme activity of AaJMT, thus indicating their determining role in JA substrate binding. The GC-MS analysis validated that mutant proteins of AaJMT were unable to convert JA into MeJA. Finally, the artemisinin biosynthetic and trichome developmental genes were upregulated in AaJMT overexpression transgenic lines, which in turn increased the artemisinin content.
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Affiliation(s)
- Ishfaq Majid Hurrah
- Plant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine, Sanat Nagar, Srinagar, Jammu and Kashmir, 190005, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India
| | - Amit Kumar
- Instrumentation Division, CSIR-Indian Institute of Integrative Medicine, Jammu, 180001, India
| | - Nazia Abbas
- Plant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine, Sanat Nagar, Srinagar, Jammu and Kashmir, 190005, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India.
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Ali J, Mukarram M, Ojo J, Dawam N, Riyazuddin R, Ghramh HA, Khan KA, Chen R, Kurjak D, Bayram A. Harnessing Phytohormones: Advancing Plant Growth and Defence Strategies for Sustainable Agriculture. PHYSIOLOGIA PLANTARUM 2024; 176:e14307. [PMID: 38705723 DOI: 10.1111/ppl.14307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2024] [Revised: 04/07/2024] [Accepted: 04/10/2024] [Indexed: 05/07/2024]
Abstract
Phytohormones, pivotal regulators of plant growth and development, are increasingly recognized for their multifaceted roles in enhancing crop resilience against environmental stresses. In this review, we provide a comprehensive synthesis of current research on utilizing phytohormones to enhance crop productivity and fortify their defence mechanisms. Initially, we introduce the significance of phytohormones in orchestrating plant growth, followed by their potential utilization in bolstering crop defences against diverse environmental stressors. Our focus then shifts to an in-depth exploration of phytohormones and their pivotal roles in mediating plant defence responses against biotic stressors, particularly insect pests. Furthermore, we highlight the potential impact of phytohormones on agricultural production while underscoring the existing research gaps and limitations hindering their widespread implementation in agricultural practices. Despite the accumulating body of research in this field, the integration of phytohormones into agriculture remains limited. To address this discrepancy, we propose a comprehensive framework for investigating the intricate interplay between phytohormones and sustainable agriculture. This framework advocates for the adoption of novel technologies and methodologies to facilitate the effective deployment of phytohormones in agricultural settings and also emphasizes the need to address existing research limitations through rigorous field studies. By outlining a roadmap for advancing the utilization of phytohormones in agriculture, this review aims to catalyse transformative changes in agricultural practices, fostering sustainability and resilience in agricultural settings.
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Affiliation(s)
- Jamin Ali
- College of Plant Protection, Jilin Agricultural University, Changchun, PR China
| | - Mohammad Mukarram
- Food and Plant Biology Group, Department of Plant Biology, Universidad de la República, Montevideo, Uruguay
| | - James Ojo
- Department of Crop Production, Kwara State University, Malete, Nigeria
| | - Nancy Dawam
- Department of Zoology, Faculty of Natural and Applied Sciences, Plateau State University Bokkos, Diram, Nigeria
| | | | - Hamed A Ghramh
- Centre of Bee Research and its Products, Research Centre for Advanced Materials Science, King Khalid University, Abha, Saudi Arabia
- Biology Department, Faculty of Science, King Khalid University, Abha, Saudi Arabia
| | - Khalid Ali Khan
- Centre of Bee Research and its Products, Research Centre for Advanced Materials Science, King Khalid University, Abha, Saudi Arabia
- Applied College, King Khalid University, Abha, Saudi Arabia
| | - Rizhao Chen
- College of Plant Protection, Jilin Agricultural University, Changchun, PR China
| | - Daniel Kurjak
- Institute of Forest Ecology, Slovak Academy of Sciences, Zvolen, Slovakia
- Faculty of Forestry, Technical University in Zvolen, Zvolen, Slovakia
| | - Ahmet Bayram
- Plant Protection, Faculty of Agriculture, Technical University in Zvolen, Zvolen, Slovakia
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Kulkarni OS, Mazumder M, Kini S, Hill ED, Aow JSB, Phua SML, Elejalde U, Kjelleberg S, Swarup S. Volatile methyl jasmonate from roots triggers host-beneficial soil microbiome biofilms. Nat Chem Biol 2024; 20:473-483. [PMID: 37957272 PMCID: PMC10972745 DOI: 10.1038/s41589-023-01462-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Accepted: 09/28/2023] [Indexed: 11/15/2023]
Abstract
The rhizosphere is a niche surrounding plant roots, where soluble and volatile molecules mediate signaling between plants and the associated microbiota. The preferred lifestyle of soil microorganisms is in the form of biofilms. However, less is known about whether root volatile organic compounds (rVOCs) can influence soil biofilms beyond the 2-10 mm rhizosphere zone influenced by root exudates. We report that rVOCs shift the microbiome composition and growth dynamics of complex soil biofilms. This signaling is evolutionarily conserved from ferns to higher plants. Methyl jasmonate (MeJA) is a bioactive signal of rVOCs that rapidly triggers both biofilm and microbiome changes. In contrast to the planktonic community, the resulting biofilm community provides ecological benefits to the host from a distance via growth enhancement. Thus, a volatile host defense signal, MeJA, is co-opted for assembling host-beneficial biofilms in the soil microbiota and extending the sphere of host influence in the rhizosphere.
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Affiliation(s)
- Omkar S Kulkarni
- Singapore Centre for Environmental Life Science Engineering (SCELSE), Singapore, Singapore
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Mrinmoy Mazumder
- Singapore Centre for Environmental Life Science Engineering (SCELSE), Singapore, Singapore
| | - Shruthi Kini
- Wilmar Innovation Center, Wilmar International Ltd., Singapore, Singapore
| | - Eric D Hill
- Singapore Centre for Environmental Life Science Engineering (SCELSE), Singapore, Singapore
| | - Johanan Shao Bing Aow
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
- NUS Synthetic Biology for Clinical and Technological Innovation (SynCTI), National University of Singapore, Singapore, Singapore
| | - Samantha Mun Lin Phua
- Singapore Centre for Environmental Life Science Engineering (SCELSE), Singapore, Singapore
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Untzizu Elejalde
- Wilmar Innovation Center, Wilmar International Ltd., Singapore, Singapore
| | - Staffan Kjelleberg
- Singapore Centre for Environmental Life Science Engineering (SCELSE), Singapore, Singapore
- School of Biological Sciences, Nanyang Technological University, Singapore, Singapore
- School of Biological, Earth Environmental Sciences, University of New South Wales, Sydney, New South Wales, Australia
- Centre for Marine Science and Innovation, University of New South Wales, Sydney, New South Wales, Australia
| | - Sanjay Swarup
- Singapore Centre for Environmental Life Science Engineering (SCELSE), Singapore, Singapore.
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore.
- NUS Synthetic Biology for Clinical and Technological Innovation (SynCTI), National University of Singapore, Singapore, Singapore.
- NUS Environmental Research Institute, Singapore, Singapore.
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6
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Chase K, Belisle C, Ahlawat Y, Yu F, Sargent S, Sandoya G, Begcy K, Liu T. Examining preharvest genetic and morphological factors contributing to lettuce (Lactuca sativa L.) shelf-life. Sci Rep 2024; 14:6618. [PMID: 38503783 PMCID: PMC10951199 DOI: 10.1038/s41598-024-55037-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2023] [Accepted: 02/19/2024] [Indexed: 03/21/2024] Open
Abstract
Lettuce is a highly perishable horticultural crop with a relatively short shelf-life that limits its commercial value and contributes to food waste. Postharvest senescence varies with influences of both environmental and genetic factors. From a larger pool of romaine lettuce genotypes, we identified three genotypes with variable shelf lives and evaluated their leaf morphology characteristics and transcriptomic profiles at preharvest to predict postharvest quality. Breeding line 60184 had the shortest shelf-life (SSL), cultivar 'Manatee' had an intermediate shelf-life (ISL), and 'Okeechobee' had the longest shelf-life (LSL). We observed significantly larger leaf lamina thickness and higher stomatal index in the SSL genotypes relative to the LSL cultivar. To identify molecular indicators of shelf-life, we used a transcriptional approach between two of the contrasting genotypes, breeding line 60184 and cultivar 'Okeechobee' at preharvest. We identified 552 upregulated and 315 downregulated differentially expressed genes between the genotypes, from which 27% of them had an Arabidopsis thaliana ortholog previously characterized as senescence associated genes (SAGs). Notably, we identified several SAGs including several related to jasmonate ZIM-domain jasmonic acid signaling, chlorophyll a-b binding, and cell wall modification including pectate lyases and expansins. This study presented an innovative approach for identifying preharvest molecular factors linked to postharvest traits for prolonged shelf.
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Affiliation(s)
- Kathryn Chase
- Department of Environmental Horticulture, University of Florida, Gainesville, FL, USA
- Department of Horticultural Sciences, University of Florida, Gainesville, FL, USA
| | - Catherine Belisle
- Department of Horticultural Sciences, University of Florida, Gainesville, FL, USA
- Everglades Research and Education Center, University of Florida, Belle Glade, FL, USA
| | - Yogesh Ahlawat
- Department of Horticultural Sciences, University of Florida, Gainesville, FL, USA
| | - Fahong Yu
- Bioinformatics, Interdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, FL, USA
| | - Steven Sargent
- Department of Horticultural Sciences, University of Florida, Gainesville, FL, USA
| | - Germán Sandoya
- Department of Horticultural Sciences, University of Florida, Gainesville, FL, USA.
- Everglades Research and Education Center, University of Florida, Belle Glade, FL, USA.
| | - Kevin Begcy
- Department of Environmental Horticulture, University of Florida, Gainesville, FL, USA.
| | - Tie Liu
- Department of Horticultural Sciences, University of Florida, Gainesville, FL, USA.
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7
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Hornstein ED, Charles M, Franklin M, Edwards B, Vintila S, Kleiner M, Sederoff H. IPD3, a master regulator of arbuscular mycorrhizal symbiosis, affects genes for immunity and metabolism of non-host Arabidopsis when restored long after its evolutionary loss. PLANT MOLECULAR BIOLOGY 2024; 114:21. [PMID: 38368585 PMCID: PMC10874911 DOI: 10.1007/s11103-024-01422-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Accepted: 01/20/2024] [Indexed: 02/19/2024]
Abstract
Arbuscular mycorrhizal symbiosis (AM) is a beneficial trait originating with the first land plants, which has subsequently been lost by species scattered throughout the radiation of plant diversity to the present day, including the model Arabidopsis thaliana. To explore if elements of this apparently beneficial trait are still present and could be reactivated we generated Arabidopsis plants expressing a constitutively active form of Interacting Protein of DMI3, a key transcription factor that enables AM within the Common Symbiosis Pathway, which was lost from Arabidopsis along with the AM host trait. We characterize the transcriptomic effect of expressing IPD3 in Arabidopsis with and without exposure to the AM fungus (AMF) Rhizophagus irregularis, and compare these results to the AM model Lotus japonicus and its ipd3 knockout mutant cyclops-4. Despite its long history as a non-AM species, restoring IPD3 in the form of its constitutively active DNA-binding domain to Arabidopsis altered expression of specific gene networks. Surprisingly, the effect of expressing IPD3 in Arabidopsis and knocking it out in Lotus was strongest in plants not exposed to AMF, which is revealed to be due to changes in IPD3 genotype causing a transcriptional state, which partially mimics AMF exposure in non-inoculated plants. Our results indicate that molecular connections to symbiosis machinery remain in place in this nonAM species, with implications for both basic science and the prospect of engineering this trait for agriculture.
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Affiliation(s)
- Eli D Hornstein
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, 27695, USA
| | - Melodi Charles
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, 27695, USA
| | - Megan Franklin
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, 27695, USA
| | - Brianne Edwards
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, 27695, USA
| | - Simina Vintila
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, 27695, USA
| | - Manuel Kleiner
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, 27695, USA
| | - Heike Sederoff
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, 27695, USA.
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8
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Catania EM, Dubs NM, Soumen S, Barkman TJ. The Mutational Road not Taken: Using Ancestral Sequence Resurrection to Evaluate the Evolution of Plant Enzyme Substrate Preferences. Genome Biol Evol 2024; 16:evae016. [PMID: 38290535 PMCID: PMC10853004 DOI: 10.1093/gbe/evae016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Accepted: 01/19/2024] [Indexed: 02/01/2024] Open
Abstract
We investigated the flowering plant salicylic acid methyl transferase (SAMT) enzyme lineage to understand the evolution of substrate preference change. Previous studies indicated that a single amino acid replacement to the SAMT active site (H150M) was sufficient to change ancestral enzyme substrate preference from benzoic acid to the structurally similar substrate, salicylic acid (SA). Yet, subsequent studies have shown that the H150M function-changing replacement did not likely occur during the historical episode of enzymatic divergence studied. Therefore, we reinvestigated the origin of SA methylation preference here and additionally assessed the extent to which epistasis may act to limit mutational paths. We found that the SAMT lineage of enzymes acquired preference to methylate SA from an ancestor that preferred to methylate benzoic acid as previously reported. In contrast, we found that a different amino acid replacement, Y267Q, was sufficient to change substrate preference with others providing small positive-magnitude epistatic improvements. We show that the kinetic basis for the ancestral enzymatic change in substate preference by Y267Q appears to be due to both a reduced specificity constant, kcat/KM, for benzoic acid and an improvement in KM for SA. Therefore, this lineage of enzymes appears to have had multiple mutational paths available to achieve the same evolutionary divergence. While the reasons remain unclear for why one path was taken, and the other was not, the mutational distance between ancestral and descendant codons may be a factor.
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Affiliation(s)
- Emily M Catania
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008, USA
| | - Nicole M Dubs
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008, USA
| | - Shejal Soumen
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008, USA
| | - Todd J Barkman
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008, USA
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Zhang X, Yu Y, Zhang J, Qian X, Li X, Sun X. Recent Progress Regarding Jasmonates in Tea Plants: Biosynthesis, Signaling, and Function in Stress Responses. Int J Mol Sci 2024; 25:1079. [PMID: 38256153 PMCID: PMC10816084 DOI: 10.3390/ijms25021079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Revised: 01/11/2024] [Accepted: 01/12/2024] [Indexed: 01/24/2024] Open
Abstract
Tea plants have to adapt to frequently challenging environments due to their sessile lifestyle and perennial evergreen nature. Jasmonates regulate not only tea plants' responses to biotic stresses, including herbivore attack and pathogen infection, but also tolerance to abiotic stresses, such as extreme weather conditions and osmotic stress. In this review, we summarize recent progress about jasmonaic acid (JA) biosynthesis and signaling pathways, as well as the underlying mechanisms mediated by jasmontes in tea plants in responses to biotic stresses and abiotic stresses. This review provides a reference for future research on the JA signaling pathway in terms of its regulation against various stresses of tea plants. Due to the lack of a genetic transformation system, the JA pathway of tea plants is still in the preliminary stages. It is necessary to perform further efforts to identify new components involved in the JA regulatory pathway through the combination of genetic and biochemical methods.
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Affiliation(s)
- Xin Zhang
- Tea Research Institute, Chinese Academy of Agricultural Sciences, No. 9 South Meiling Road, Hangzhou 310008, China; (X.Z.); (Y.Y.); (J.Z.); (X.Q.); (X.L.)
- Key Laboratory of Biology, Genetics and Breeding of Special Economic Animals and Plants, Ministry of Agriculture and Rural Affairs, Hangzhou 310008, China
| | - Yongchen Yu
- Tea Research Institute, Chinese Academy of Agricultural Sciences, No. 9 South Meiling Road, Hangzhou 310008, China; (X.Z.); (Y.Y.); (J.Z.); (X.Q.); (X.L.)
- Key Laboratory of Biology, Genetics and Breeding of Special Economic Animals and Plants, Ministry of Agriculture and Rural Affairs, Hangzhou 310008, China
| | - Jin Zhang
- Tea Research Institute, Chinese Academy of Agricultural Sciences, No. 9 South Meiling Road, Hangzhou 310008, China; (X.Z.); (Y.Y.); (J.Z.); (X.Q.); (X.L.)
- Key Laboratory of Biology, Genetics and Breeding of Special Economic Animals and Plants, Ministry of Agriculture and Rural Affairs, Hangzhou 310008, China
| | - Xiaona Qian
- Tea Research Institute, Chinese Academy of Agricultural Sciences, No. 9 South Meiling Road, Hangzhou 310008, China; (X.Z.); (Y.Y.); (J.Z.); (X.Q.); (X.L.)
- Key Laboratory of Biology, Genetics and Breeding of Special Economic Animals and Plants, Ministry of Agriculture and Rural Affairs, Hangzhou 310008, China
| | - Xiwang Li
- Tea Research Institute, Chinese Academy of Agricultural Sciences, No. 9 South Meiling Road, Hangzhou 310008, China; (X.Z.); (Y.Y.); (J.Z.); (X.Q.); (X.L.)
- Key Laboratory of Biology, Genetics and Breeding of Special Economic Animals and Plants, Ministry of Agriculture and Rural Affairs, Hangzhou 310008, China
| | - Xiaoling Sun
- Tea Research Institute, Chinese Academy of Agricultural Sciences, No. 9 South Meiling Road, Hangzhou 310008, China; (X.Z.); (Y.Y.); (J.Z.); (X.Q.); (X.L.)
- Key Laboratory of Biology, Genetics and Breeding of Special Economic Animals and Plants, Ministry of Agriculture and Rural Affairs, Hangzhou 310008, China
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Inoue S, Tsuzuki H, Matsuda K, Kitaoka N, Matsuura H. Investigation Of The Biosynthesis Pathway That Generates cis-Jasmone. Chembiochem 2024; 25:e202300593. [PMID: 37934005 DOI: 10.1002/cbic.202300593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 09/29/2023] [Indexed: 11/08/2023]
Abstract
Researchers have established that (+)-7-iso-jasmonic acid ((+)-7-iso-JA) is an intermediate in the production of cis-jasmone (CJ); however, the biosynthetic pathway of CJ has not been fully described. Previous reports stated that CJ, a substructure of pyrethrin II produced by pyrethrum (Tanacetum cinerariifolium), is not biosynthesized through this biosynthetic pathway. To clarify the ambiguity, stable isotope-labelled jasmonates were synthesized, and compounds were applied to apple mint (Mentha suaveolens) via air propagation. The results showed that cis-jasmone is not generated from intermediate (+)-7-iso-JA, and (+)-7-iso-JA is not produced from 3,7-dideydro-JA (3,7-ddh-JA); however, 3,7-didehydro-JA and 4,5-didehydro-7-iso-JA were converted into CJ and JA, respectively.
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Affiliation(s)
- Shiro Inoue
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kita-ku, Sapporo, Hokkaido, 060-8589, Japan
| | - Hiromu Tsuzuki
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kita-ku, Sapporo, Hokkaido, 060-8589, Japan
| | - Kazuhiko Matsuda
- Graduate School of Agriculture, Faculty of Agriculture, Kinki University Nakamachi, Nara, 631-8505, Japan
| | - Naoki Kitaoka
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kita-ku, Sapporo, Hokkaido, 060-8589, Japan
| | - Hideyuki Matsuura
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kita-ku, Sapporo, Hokkaido, 060-8589, Japan
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11
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Yue Y, Zhang X, Wang L, He J, Yang S, Li X, Yu Y, Yu R, Fan Y. Identification and Characterization of Jasmonic Acid Methyltransferase Involved in the Formation of Floral Methyl Jasmonate in Hedychium coronarium. PLANTS (BASEL, SWITZERLAND) 2023; 13:8. [PMID: 38202316 PMCID: PMC10780636 DOI: 10.3390/plants13010008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 12/12/2023] [Accepted: 12/15/2023] [Indexed: 01/12/2024]
Abstract
Hedychium coronarium is a popular ornamental flower in tropical and subtropical areas due to its elegant appearance and inviting fragrance. Methyl jasmonate (MeJA) is one of the volatile compounds in the blooming flowers of H. coronarium. However, the molecular mechanism underlying floral MeJA formation is still unclear in H. coronarium. In this study, a total of 12 SABATH family genes were identified in the genome of H. coronarium, and their encoded proteins range from 366 to 387 amino acids. Phylogenetic analysis revealed seven clades in the SABATH family and a JMT ortholog clade, including two HcSABATH members. Combined with expression profiling of HcSABATH members, HcJMT1 was identified as the top candidate gene for floral MeJA biosynthesis. In vitro enzyme assays showed that HcJMT1 can catalyze the production of MeJA from jasmonic acid. Gene expression analysis indicated that HcJMT1 exhibited the highest expression in the labella and lateral petals, the major sites of MeJA emission. During flower development, the two MeJA isomers, major isomers in the products of the HcJMT1 protein, were released after anthesis, in which stage HcJMT1 displayed high expression. Our results indicated that HcJMT1 is involved in the formation of floral MeJA in H. coronarium.
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Affiliation(s)
- Yuechong Yue
- The Research Center for Ornamental Plants, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (Y.Y.); (X.Z.); (L.W.); (J.H.); (X.L.); (Y.Y.)
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, South China Agricultural University, Guangzhou 510642, China
| | - Xiaohong Zhang
- The Research Center for Ornamental Plants, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (Y.Y.); (X.Z.); (L.W.); (J.H.); (X.L.); (Y.Y.)
| | - Lan Wang
- The Research Center for Ornamental Plants, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (Y.Y.); (X.Z.); (L.W.); (J.H.); (X.L.); (Y.Y.)
| | - Jieling He
- The Research Center for Ornamental Plants, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (Y.Y.); (X.Z.); (L.W.); (J.H.); (X.L.); (Y.Y.)
| | - Shengnan Yang
- The Research Center for Ornamental Plants, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (Y.Y.); (X.Z.); (L.W.); (J.H.); (X.L.); (Y.Y.)
| | - Xinyue Li
- The Research Center for Ornamental Plants, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (Y.Y.); (X.Z.); (L.W.); (J.H.); (X.L.); (Y.Y.)
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, South China Agricultural University, Guangzhou 510642, China
| | - Yunyi Yu
- The Research Center for Ornamental Plants, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (Y.Y.); (X.Z.); (L.W.); (J.H.); (X.L.); (Y.Y.)
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, South China Agricultural University, Guangzhou 510642, China
| | - Rangcai Yu
- College of Life Sciences, South China Agricultural University, Guangzhou 510642, China;
| | - Yanping Fan
- The Research Center for Ornamental Plants, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (Y.Y.); (X.Z.); (L.W.); (J.H.); (X.L.); (Y.Y.)
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, South China Agricultural University, Guangzhou 510642, China
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12
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Shaffique S, Hussain S, Kang SM, Imran M, Injamum-Ul-Hoque M, Khan MA, Lee IJ. Phytohormonal modulation of the drought stress in soybean: outlook, research progress, and cross-talk. FRONTIERS IN PLANT SCIENCE 2023; 14:1237295. [PMID: 37929163 PMCID: PMC10623132 DOI: 10.3389/fpls.2023.1237295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Accepted: 09/07/2023] [Indexed: 11/07/2023]
Abstract
Phytohormones play vital roles in stress modulation and enhancing the growth of plants. They interact with one another to produce programmed signaling responses by regulating gene expression. Environmental stress, including drought stress, hampers food and energy security. Drought is abiotic stress that negatively affects the productivity of the crops. Abscisic acid (ABA) acts as a prime controller during an acute transient response that leads to stomatal closure. Under long-term stress conditions, ABA interacts with other hormones, such as jasmonic acid (JA), gibberellins (GAs), salicylic acid (SA), and brassinosteroids (BRs), to promote stomatal closure by regulating genetic expression. Regarding antagonistic approaches, cytokinins (CK) and auxins (IAA) regulate stomatal opening. Exogenous application of phytohormone enhances drought stress tolerance in soybean. Thus, phytohormone-producing microbes have received considerable attention from researchers owing to their ability to enhance drought-stress tolerance and regulate biological processes in plants. The present study was conducted to summarize the role of phytohormones (exogenous and endogenous) and their corresponding microbes in drought stress tolerance in model plant soybean. A total of n=137 relevant studies were collected and reviewed using different research databases.
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Affiliation(s)
- Shifa Shaffique
- Department of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea
| | - Saddam Hussain
- Department of Agronomy, University of Agriculture, Faisalabad, Pakistan
| | - Sang-Mo Kang
- Department of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea
| | - Muhamad Imran
- Biosafety Division, National Institute of Agriculture Science, Rural Development Administration, Jeonju, Republic of Korea
| | - Md Injamum-Ul-Hoque
- Department of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea
| | - Muhammad Aaqil Khan
- Department of Chemical and Life Science, Qurtaba University of Science and Information Technology, Peshawar, Pakistan
| | - In-Jung Lee
- Department of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea
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13
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Teng D, Jing W, Lv B, Huang X, Zhao D, Kou J, Liu X, Dhiloo KH, Zhang Y. Two jasmonic acid carboxyl methyltransferases in Gossypium hirsutum involved in MeJA biosynthesis may contribute to plant defense. FRONTIERS IN PLANT SCIENCE 2023; 14:1249226. [PMID: 37731981 PMCID: PMC10508841 DOI: 10.3389/fpls.2023.1249226] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Accepted: 08/18/2023] [Indexed: 09/22/2023]
Abstract
Jasmonic acid (JA) and methyl jasmonate (MeJA), the crucial plant hormones, can induce the emission of plant volatiles and regulate the behavioral responses of insect pests or their natural enemies. In this study, two jasmonic acid carboxyl methyltransferases (JMTs), GhJMT1 and GhJMT2, involved in MeJA biosynthesis in Gossypium. hirsutum were identified and further functionally confirmed. In vitro, recombinant GhJMT1 and GhJMT2 were both responsible for the conversion of JA to MeJA. Quantitative real-time PCR (qPCR) measurement indicated that GhJMT1 and GhJMT2 were obviously up-regulated in leaves and stems of G. hirsutum after being treated with MeJA. In gas chromatography-mass spectrometry (GC-MS) analysis, MeJA treatment significantly induced plant volatiles emission such as (E)-β-ocimene, (Z)-3-hexenyl acetate, linalool and (3E)-4,8-dimethyl-1,3,7-nonatriene (DMNT), which play vital roles in direct and indirect plant defenses. Moreover, antennae of parasitoid wasps Microplitis mediator showed electrophysiological responses to MeJA, β-ocimene, (Z)-3-hexenyl acetate and linalool at a dose dependent manner, while our previous research revealed that DMNT excites electrophysiological responses and behavioral tendencies. These findings provide a better understanding of MeJA biosynthesis and defense regulation in upland cotton, which lay a foundation to JA and MeJA employment in agricultural pest control.
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Affiliation(s)
- Dong Teng
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), College of Plant Protection, Nanjing Agricultural University, Nanjing, China
| | - Weixia Jing
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- College of Plant Protection, Shandong Agricultural University, Taian, China
| | - Beibei Lv
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xinzheng Huang
- College of Plant Protection, China Agricultural University, Beijing, China
| | - Danyang Zhao
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- School of Resources and Environment, Henan Institute of Science and Technology, Xinxiang, China
| | - Junfeng Kou
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- Institute of Plant Protection, Cangzhou Academy of Agriculture and Forestry Sciences, Cangzhou, China
| | - Xiaohe Liu
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Khalid Hussain Dhiloo
- Department of Entomology, Faculty of Crop Protection, Sindh Agriculture University, Tandojam, Pakistan
| | - Yongjun Zhang
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
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14
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Liu Y, Yu Y, Fei S, Chen Y, Xu Y, Zhu Z, He Y. Overexpression of Sly-miR398b Compromises Disease Resistance against Botrytis cinerea through Regulating ROS Homeostasis and JA-Related Defense Genes in Tomato. PLANTS (BASEL, SWITZERLAND) 2023; 12:2572. [PMID: 37447133 DOI: 10.3390/plants12132572] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Revised: 06/27/2023] [Accepted: 07/04/2023] [Indexed: 07/15/2023]
Abstract
MicroRNAs (miRNAs) have been shown to be critical components in plant immunity. MicroRNA398 (miR398) is a highly conserved miRNA in all land plants and plays crucial roles in diverse biotic stress responses. However, the role of miR398 has not yet been characterized in tomato resistance against Botrytis cinerea. In this report, the transcript levels of sly-miR398b were strongly decreased in B. cinerea-infected leaves and the overexpression of sly-miR398b resulted in enhanced susceptibility. The attenuated expression of cytosol Cu/Zn-SOD (CSD1), chloroplast Cu/Zn-SOD (CSD2), and guaiacol peroxidase (GPOD), as well as the decreased activities of superoxide dismutase (SOD) and GPOD, collectively led to increased hydrogen peroxide (H2O2) accumulation in sly-miR398b overexpressing plants. Furthermore, sly-miR398b was induced by methyl jasmonate (MeJA) treatment. The overexpression of sly-miR398b suppressed the expression of TomLoxD, LapA, and PR-STH2 in response to B. cinerea and MeJA treatment. Our data demonstrate that sly-miR398b overexpression negatively regulates the resistance to B. cinerea in tomato by inducing the accumulation of reactive oxygen species (ROS) and downregulating the expression of MeJA-responsive defense genes.
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Affiliation(s)
- Yuanyuan Liu
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, Key Laboratory of Quality and Safety Control for Subtropical Fruit and Vegetable, Ministry of Agriculture and Rural Affairs, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, China
| | - Yiren Yu
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, Key Laboratory of Quality and Safety Control for Subtropical Fruit and Vegetable, Ministry of Agriculture and Rural Affairs, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, China
| | - Shihong Fei
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, Key Laboratory of Quality and Safety Control for Subtropical Fruit and Vegetable, Ministry of Agriculture and Rural Affairs, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, China
| | - Yuxin Chen
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, Key Laboratory of Quality and Safety Control for Subtropical Fruit and Vegetable, Ministry of Agriculture and Rural Affairs, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, China
| | - Yunmin Xu
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, Key Laboratory of Quality and Safety Control for Subtropical Fruit and Vegetable, Ministry of Agriculture and Rural Affairs, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, China
| | - Zhujun Zhu
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, Key Laboratory of Quality and Safety Control for Subtropical Fruit and Vegetable, Ministry of Agriculture and Rural Affairs, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, China
| | - Yong He
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, Key Laboratory of Quality and Safety Control for Subtropical Fruit and Vegetable, Ministry of Agriculture and Rural Affairs, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, China
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15
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Graska J, Fidler J, Gietler M, Prabucka B, Nykiel M, Labudda M. Nitric Oxide in Plant Functioning: Metabolism, Signaling, and Responses to Infestation with Ecdysozoa Parasites. BIOLOGY 2023; 12:927. [PMID: 37508359 PMCID: PMC10376146 DOI: 10.3390/biology12070927] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Revised: 06/22/2023] [Accepted: 06/27/2023] [Indexed: 07/30/2023]
Abstract
Nitric oxide (NO) is an important signaling molecule that is involved in a wide range of physiological processes in plants, including responses to biotic and abiotic stresses. Changes in endogenous NO concentration lead to activation/deactivation of NO signaling and NO-related processes. This paper presents the current state of knowledge on NO biosynthesis and scavenging pathways in plant cells and highlights the role of NO in post-translational modifications of proteins (S-nitrosylation, nitration, and phosphorylation) in plants under optimal and stressful environmental conditions. Particular attention was paid to the interactions of NO with other signaling molecules: reactive oxygen species, abscisic acid, auxins (e.g., indole-3-acetic acid), salicylic acid, and jasmonic acid. In addition, potential common patterns of NO-dependent defense responses against attack and feeding by parasitic and molting Ecdysozoa species such as nematodes, insects, and arachnids were characterized. Our review definitely highlights the need for further research on the involvement of NO in interactions between host plants and Ecdysozoa parasites, especially arachnids.
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Affiliation(s)
- Jakub Graska
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland; (J.F.); (M.G.); (B.P.); (M.N.)
| | | | | | | | | | - Mateusz Labudda
- Department of Biochemistry and Microbiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland; (J.F.); (M.G.); (B.P.); (M.N.)
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16
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Kutty NN, Mishra M. Dynamic distress calls: volatile info chemicals induce and regulate defense responses during herbivory. FRONTIERS IN PLANT SCIENCE 2023; 14:1135000. [PMID: 37416879 PMCID: PMC10322200 DOI: 10.3389/fpls.2023.1135000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Accepted: 05/10/2023] [Indexed: 07/08/2023]
Abstract
Plants are continuously threatened by a plethora of biotic stresses caused by microbes, pathogens, and pests, which often act as the major constraint in crop productivity. To overcome such attacks, plants have evolved with an array of constitutive and induced defense mechanisms- morphological, biochemical, and molecular. Volatile organic compounds (VOCs) are a class of specialized metabolites that are naturally emitted by plants and play an important role in plant communication and signaling. During herbivory and mechanical damage, plants also emit an exclusive blend of volatiles often referred to as herbivore-induced plant volatiles (HIPVs). The composition of this unique aroma bouquet is dependent upon the plant species, developmental stage, environment, and herbivore species. HIPVs emitted from infested and non-infested plant parts can prime plant defense responses by various mechanisms such as redox, systemic and jasmonate signaling, activation of mitogen-activated protein (MAP) kinases, and transcription factors; mediate histone modifications; and can also modulate the interactions with natural enemies via direct and indirect mechanisms. These specific volatile cues mediate allelopathic interactions leading to altered transcription of defense-related genes, viz., proteinase inhibitors, amylase inhibitors in neighboring plants, and enhanced levels of defense-related secondary metabolites like terpenoids and phenolic compounds. These factors act as deterrents to feeding insects, attract parasitoids, and provoke behavioral changes in plants and their neighboring species. This review presents an overview of the plasticity identified in HIPVs and their role as regulators of plant defense in Solanaceous plants. The selective emission of green leaf volatiles (GLVs) including hexanal and its derivatives, terpenes, methyl salicylate, and methyl jasmonate (MeJa) inducing direct and indirect defense responses during an attack from phloem-sucking and leaf-chewing pests is discussed. Furthermore, we also focus on the recent developments in the field of metabolic engineering focused on modulation of the volatile bouquet to improve plant defenses.
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17
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Cui G, Bi X, Lu S, Jiang Z, Deng Y. A Genetically Engineered Escherichia coli for Potential Utilization in Fungal Smut Disease Control. Microorganisms 2023; 11:1564. [PMID: 37375066 DOI: 10.3390/microorganisms11061564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 06/03/2023] [Accepted: 06/09/2023] [Indexed: 06/29/2023] Open
Abstract
Sporisorium scitamineum, the basidiomycetous fungus that causes sugarcane smut and leads to severe losses in sugarcane quantity and quality, undergoes sexual mating to form dikaryotic hyphae capable of invading the host cane. Therefore, suppressing dikaryotic hyphae formation would potentially be an effective way to prevent host infection by the smut fungus, and the following disease symptom developments. The phytohormone methyl jasmonate (MeJA) has been shown to induce plant defenses against insects and microbial pathogens. In this study, we will verify that the exogenous addition of MeJA-suppressed dikaryotic hyphae formation in S. scitamineum and Ustilago maydis under in vitro culture conditions, and the maize smut symptom caused by U. maydis, could be effectively suppressed by MeJA in a pot experiment. We constructed an Escherichia coli-expressing plant JMT gene, encoding a jasmonic acid carboxyl methyl transferase that catalyzes conversion from jasmonic acid (JA) to MeJA. By GC-MS, we will confirm that the transformed E. coli, designated as the pJMT strain, was able to produce MeJA in the presence of JA and S-adenosyl-L-methionine (SAM as methyl donor). Furthermore, the pJMT strain was able to suppress S. scitamineum filamentous growth under in vitro culture conditions. It waits to further optimize JMT expression under field conditions in order to utilize the pJMT strain as a biocontrol agent (BCA) of sugarcane smut disease. Overall, our study provides a potentially novel method for controlling crop fungal diseases by boosting phytohormone biosynthesis.
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Affiliation(s)
- Guobing Cui
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
- Henry Fork School of Biology and Agriculture, Shaoguan University, Shaoguan 512000, China
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou 510642, China
| | - Xinping Bi
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou 510642, China
| | - Shan Lu
- State Key Laboratory for Conservation and Utilization of Subtropical Ago-Bioresouces Ministry and Province Co-Sponsored Collaborative Innovation Center for Sugarcane and Sugar Industry, Nanning 530004, China
| | - Zide Jiang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou 510642, China
| | - Yizhen Deng
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou 510642, China
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18
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Wang W, Chen K, Chen N, Gao J, Zhang W, Gong J, Tong S, Chen Y, Li Y, Feng Y, Jiang Y, Ma T. Chromatin accessibility dynamics insight into crosstalk between regulatory landscapes in poplar responses to multiple treatments. TREE PHYSIOLOGY 2023; 43:1023-1041. [PMID: 36851850 DOI: 10.1093/treephys/tpad023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Accepted: 01/22/2023] [Indexed: 06/11/2023]
Abstract
Perennial trees develop and coordinate endogenous response signaling pathways, including their crosstalk and convergence, to cope with various environmental stresses which occur simultaneously in most cases. These processes are involved in gene transcriptional regulations that depend on dynamic interactions between regulatory proteins and corresponding chromatin regions, but the mechanisms remain poorly understood in trees. In this study, we detected chromatin regulatory landscapes of poplar under abscisic acid, methyl jasmonate, salicylic acid and sodium chloride (NaCl) treatment, through integrating ATAC-seq and RNA-seq data. Our results showed that the degree of chromatin accessibility for a given gene is closely related to its expression level. However, unlike the gene expression that shows treatment-specific response patterns, changes in chromatin accessibility exhibit high similarities under these treatments. We further proposed and experimentally validated that a homologous gene copy of RESPONSIVE TO DESICCATION 26 mediates the crosstalk between jasmonic acid and NaCl signaling pathways by directly regulating the stress-responsive genes and that circadian clock-related transcription factors like REVEILLE8 play a central role in response of poplar to these treatments. Overall, our study provides a chromatin insight into the molecular mechanism of transcription regulatory networks in response to different environmental stresses and raises the key roles of the circadian clock of poplar to adapt to adverse environments.
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Affiliation(s)
- Weiwei Wang
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Kai Chen
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Ningning Chen
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Jinwen Gao
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Wenyan Zhang
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Jue Gong
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Shaofei Tong
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Yang Chen
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Yiling Li
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Yanlin Feng
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Yuanzhong Jiang
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Tao Ma
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China
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19
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Jiang HW, Peng KC, Hsu TY, Chiou YC, Hsieh HL. Arabidopsis FIN219/JAR1 interacts with phytochrome a under far-red light and jasmonates in regulating hypocotyl elongation via a functional demand manner. PLoS Genet 2023; 19:e1010779. [PMID: 37216398 DOI: 10.1371/journal.pgen.1010779] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Accepted: 05/09/2023] [Indexed: 05/24/2023] Open
Abstract
Integration of light and phytohormones is essential for plant growth and development. FAR-RED INSENSITIVE 219 (FIN219)/JASMONATE RESISTANT 1 (JAR1) participates in phytochrome A (phyA)-mediated far-red (FR) light signaling in Arabidopsis and is a jasmonate (JA)-conjugating enzyme for the generation of an active JA-isoleucine. Accumulating evidence indicates that FR and JA signaling integrate with each other. However, the molecular mechanisms underlying their interaction remain largely unknown. Here, the phyA mutant was hypersensitive to JA. The double mutant fin219-2phyA-211 showed a synergistic effect on seedling development under FR light. Further evidence revealed that FIN219 and phyA antagonized with each other in a mutually functional demand to modulate hypocotyl elongation and expression of light- and JA-responsive genes. Moreover, FIN219 interacted with phyA under prolonged FR light, and MeJA could enhance their interaction with CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1) in the dark and FR light. FIN219 and phyA interaction occurred mainly in the cytoplasm, and they regulated their mutual subcellular localization under FR light. Surprisingly, the fin219-2 mutant abolished the formation of phyA nuclear bodies under FR light. Overall, these data identified a vital mechanism of phyA-FIN219-COP1 association in response to FR light, and MeJA may allow the photoactivated phyA to trigger photomorphogenic responses.
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Affiliation(s)
- Han-Wei Jiang
- Institute of Plant Biology, College of Life Science, National Taiwan University, Taipei, Taiwan
| | - Kai-Chun Peng
- Institute of Plant Biology, College of Life Science, National Taiwan University, Taipei, Taiwan
| | - Ting-Yu Hsu
- Institute of Plant Biology, College of Life Science, National Taiwan University, Taipei, Taiwan
| | - Yen-Chang Chiou
- Institute of Plant Biology, College of Life Science, National Taiwan University, Taipei, Taiwan
| | - Hsu-Liang Hsieh
- Institute of Plant Biology, College of Life Science, National Taiwan University, Taipei, Taiwan
- Department of Life Science, College of Life Science, National Taiwan University, Taipei, Taiwan
- Master Program in Global Agriculture Technology and Genomic Science, National Taiwan University, Taipei, Taiwan
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20
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Lin Z, Hu Z, Zhou L, Liu B, Huang X, Deng Z, Qu X. A large conserved family of small-molecule carboxyl methyltransferases identified from microorganisms. Proc Natl Acad Sci U S A 2023; 120:e2301389120. [PMID: 37155856 PMCID: PMC10193983 DOI: 10.1073/pnas.2301389120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2023] [Accepted: 04/13/2023] [Indexed: 05/10/2023] Open
Abstract
Small-molecule carboxyl methyltransferases (CbMTs) constitute a small proportion of the reported methyltransferases, but they have received extensive attention due to their important physiological functions. Most of the small-molecule CbMTs isolated to date originate from plants and are members of the SABATH family. In this study, we identified a type of CbMT (OPCMT) from a group of Mycobacteria, which has a distinct catalytic mechanism from the SABATH methyltransferases. The enzyme contains a large hydrophobic substrate-binding pocket (~400 Å3) and utilizes two conserved residues, Thr20 and Try194, to retain the substrate in a favorable orientation for catalytic transmethylation. The OPCMT_like MTs have a broad substrate scope and can accept diverse carboxylic acids enabling efficient production of methyl esters. They are widely (more than 10,000) distributed in microorganisms, including several well-known pathogens, whereas no related genes are found in humans. In vivo experiments implied that the OPCMT_like MTs was indispensable for M. neoaurum, suggesting that these proteins have important physiological functions.
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Affiliation(s)
- Zhi Lin
- State Key Laboratory of Microbial Metabolism, School of Life Science & Biotechnology, Shanghai Jiao Tong University, Shanghai200240, China
- Zhangjiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai200240, China
| | - Zhiwei Hu
- State Key Laboratory of Microbial Metabolism, School of Life Science & Biotechnology, Shanghai Jiao Tong University, Shanghai200240, China
| | - Linjun Zhou
- Key Laboratory of Combinatorial Biosynthesis and Drug Discovery Ministry of Education & Abiochem Biotech Joint Center for Pharmaceutical Innovation, School of Pharmaceutical Sciences, Wuhan University, Wuhan430071, China
| | - Benben Liu
- State Key Laboratory of Microbial Metabolism, School of Life Science & Biotechnology, Shanghai Jiao Tong University, Shanghai200240, China
| | - Xiaowei Huang
- Department of Gastroenterology and Hepatology, Tongji Hospital affiliated to Huazhong University of Science and Technology, Wuhan430071, China
| | - Zixin Deng
- State Key Laboratory of Microbial Metabolism, School of Life Science & Biotechnology, Shanghai Jiao Tong University, Shanghai200240, China
| | - Xudong Qu
- State Key Laboratory of Microbial Metabolism, School of Life Science & Biotechnology, Shanghai Jiao Tong University, Shanghai200240, China
- Zhangjiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai200240, China
- Key Laboratory of Combinatorial Biosynthesis and Drug Discovery Ministry of Education & Abiochem Biotech Joint Center for Pharmaceutical Innovation, School of Pharmaceutical Sciences, Wuhan University, Wuhan430071, China
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21
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Riekötter J, Oklestkova J, Muth J, Twyman RM, Epping J. Transcriptomic analysis of Chinese yam ( Dioscorea polystachya Turcz.) variants indicates brassinosteroid involvement in tuber development. Front Nutr 2023; 10:1112793. [PMID: 37215221 PMCID: PMC10196131 DOI: 10.3389/fnut.2023.1112793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Accepted: 04/11/2023] [Indexed: 05/24/2023] Open
Abstract
Dioscorea is an important but underutilized genus of flowering plants that grows predominantly in tropical and subtropical regions. Several species, known as yam, develop large underground tubers and aerial bulbils that are used as food. The Chinese yam (D. polystachya Turcz.) is one of the few Dioscorea species that grows well in temperate regions and has been proposed as a climate-resilient crop to enhance food security in Europe. However, the fragile, club-like tubers are unsuitable for mechanical harvesting, which is facilitated by shorter and thicker storage organs. Brassinosteroids (BRs) play a key role in plant cell division, cell elongation and proliferation, as well as in the gravitropic response. We collected RNA-Seq data from the head, middle and tip of two tuber shape variants: F60 (long, thin) and F2000 (short, thick). Comparative transcriptome analysis of F60 vs. F2000 revealed 30,229 differentially expressed genes (DEGs), 1,393 of which were differentially expressed in the growing tip. Several DEGs are involved in steroid/BR biosynthesis or signaling, or may be regulated by BRs. The quantification of endogenous BRs revealed higher levels of castasterone (CS), 28-norCS, 28-homoCS and brassinolide in F2000 compared to F60 tubers. The highest BR levels were detected in the growing tip, and CS was the most abundant (439.6 ± 196.41 pmol/g in F2000 and 365.6 ± 112.78 pmol/g in F60). Exogenous 24-epi-brassinolide (epi-BL) treatment (20 nM) in an aeroponic system significantly increased the width-to-length ratio (0.045 ± 0.002) compared to the mock-treated plants (0.03 ± 0.002) after 7 weeks, indicating that exogenous epi-BL produces shorter and thicker tubers. In this study we demonstrate the role of BRs in D. polystachya tuber shape, providing insight into the role of plant hormones in yam storage organ development. We found that BRs can influence tuber shape in Chinese yam by regulating the expression of genes involved cell expansion. Our data can help to improve the efficiency of Chinese yam cultivation, which could provide an alternative food source and thus contribute to future food security in Europe.
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Affiliation(s)
- Jenny Riekötter
- Department of Biology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany
| | - Jana Oklestkova
- Laboratory of Growth Regulators, The Czech Academy of Science, Institute of Experimental Botany and Palacký University, Faculty of Science, Olomouc, Czechia
| | - Jost Muth
- Fraunhofer Institute for Molecular Biology and Applied Ecology (IME), Aachen, Germany
| | | | - Janina Epping
- Department of Biology, Institute of Plant Biology and Biotechnology, University of Münster, Münster, Germany
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22
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Malviya D, Singh P, Singh UB, Paul S, Kumar Bisen P, Rai JP, Verma RL, Fiyaz RA, Kumar A, Kumari P, Dei S, Ahmed MR, Bagyaraj DJ, Singh HV. Arbuscular mycorrhizal fungi-mediated activation of plant defense responses in direct seeded rice ( Oryza sativa L.) against root-knot nematode Meloidogyne graminicola. Front Microbiol 2023; 14:1104490. [PMID: 37200920 PMCID: PMC10185796 DOI: 10.3389/fmicb.2023.1104490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Accepted: 03/13/2023] [Indexed: 05/20/2023] Open
Abstract
Rhizosphere is the battlefield of beneficial and harmful (so called phytopathogens) microorganisms. Moreover, these microbial communities are struggling for their existence in the soil and playing key roles in plant growth, mineralization, nutrient cycling and ecosystem functioning. In the last few decades, some consistent pattern have been detected so far that link soil community composition and functions with plant growth and development; however, it has not been studied in detail. AM fungi are model organisms, besides potential role in nutrient cycling; they modulate biochemical pathways directly or indirectly which lead to better plant growth under biotic and abiotic stress conditions. In the present investigations, we have elucidated the AM fungi-mediated activation of plant defense responses against Meloidogyne graminicola causing root-knot disease in direct seeded rice (Oryza sativa L.). The study describes the multifarious effects of Funneliformis mosseae, Rhizophagus fasciculatus, and Rhizophagus intraradices inoculated individually or in combination under glasshouse conditions in rice plants. It was found that F. mosseae, R. fasciculatus and R. intraradices when applied individually or in combination modulated the biochemical and molecular mechanisms in the susceptible and resistant inbred lines of rice. AM inoculation significantly increased various plant growth attributes in plants with simultaneous decrease in the root-knot intensity. Among these, the combined application of F. mosseae, R. fasciculatus, and R. intraradices was found to enhance the accumulation and activities of biomolecules and enzymes related to defense priming as well as antioxidation in the susceptible and resistant inbred lines of rice pre-challenged with M. graminicola. The application of F. mosseae, R. fasciculatus and R. intraradices, induced the key genes involved in plant defense and signaling and it has been demonstrated for the first time. Results of the present investigation advocated that the application of F. mosseae, R. fasciculatus and R. intraradices, particularly a combination of all three, not only helped in the control of root-knot nematodes but also increased plant growth as well as enhances the gene expression in rice. Thus, it proved to be an excellent biocontrol as well as plant growth-promoting agent in rice even when the crop is under biotic stress of the root-knot nematode, M. graminicola.
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Affiliation(s)
- Deepti Malviya
- Plant-Microbe Interaction and Rhizosphere Biology Lab, ICAR-National Bureau of Agriculturally Important Microorganisms, Maunath Bhanjan, India
| | - Prakash Singh
- Department of Plant Breeding and Genetics, Veer Kunwar Singh College of Agriculture, Bihar Agricultural University, Dumraon, India
| | - Udai B Singh
- Plant-Microbe Interaction and Rhizosphere Biology Lab, ICAR-National Bureau of Agriculturally Important Microorganisms, Maunath Bhanjan, India
| | - Surinder Paul
- Plant-Microbe Interaction and Rhizosphere Biology Lab, ICAR-National Bureau of Agriculturally Important Microorganisms, Maunath Bhanjan, India
| | | | - Jai P Rai
- Department of Mycology and Plant Pathology, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi, India
| | - Ram Lakhan Verma
- Division of Crop Improvement, ICAR-National Rice Research Institute, Cuttack, India
| | - R Abdul Fiyaz
- Division of Crop Improvement, ICAR-Indian Institute of Rice Research, Hyderabad, India
| | - A Kumar
- Bihar Agricultural University, Bhagalpur, India
| | - Poonam Kumari
- Agrotechnology Division, CSIR-Institute of Himalayan Bioresource Technology, Palampur, India
| | | | - Mohd Reyaz Ahmed
- Department of Plant Pathology, Veer Kunwar Singh College of Agriculture, Bihar Agricultural University, Dumraon, India
| | - D J Bagyaraj
- Centre for Natural Biological Resources and Community Development, Bengaluru, India
| | - Harsh V Singh
- Plant-Microbe Interaction and Rhizosphere Biology Lab, ICAR-National Bureau of Agriculturally Important Microorganisms, Maunath Bhanjan, India
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23
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Shi MT, Zhang TJ, Fang Y, Pan CP, Fu HY, Gao SJ, Wang JD. Nano-selenium enhances sugarcane resistance to Xanthomonas albilineans infection and improvement of juice quality. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2023; 254:114759. [PMID: 36950993 DOI: 10.1016/j.ecoenv.2023.114759] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2022] [Revised: 03/06/2023] [Accepted: 03/07/2023] [Indexed: 06/18/2023]
Abstract
Selenium is an important trace element that is beneficial to human health and can enhance plant resistance and crop quality. The occurrence of up-to-date nanotechnology greatly promotes the beneficial efficiency of this trace element on crops. The discovery of nano-Se increased the crop quality and reduced plant disease in different plant. In this study, we reduced sugarcane leaf scald disease incidence by exogenously spraying different concentrations (5 mg/L and 10 mg/L) of nano-Se. Additional studies revealed that spraying of nano-Se reduced reactive oxygen species (ROS) and H2O2 accumulation, and increased antioxidant enzyme activities in sugarcane. The nano-selenium treatments also increased the content of jasmonic acid (JA) and the expression of JA pathway genes. Furthermore, we also found that use nano-Se treatment in an appropriate way can enhance the quality of cane juice. The brix of the cane juice of the selenium-enriched treatment was significantly higher than that of the control group, which was 10.98% and 20.81% higher than that of the CK group, respectively. Meanwhile, the content of certain beneficial amino acids was increased, with the highest being 3.9 times higher than the control. Taken together, our findings inferred that nano-Se could act as a potential eco-fungicide to protect sugarcane from can be used as a potential ecological bactericide to protect sugarcane from Xanthomonas albilineans infections, and improve sugarcane quality. The results arising from this study not only introduces an ecological method to control X. albilineans, but also provides a deep insight into this trace elements for improving juice quality.
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Affiliation(s)
- Meng-Ting Shi
- National Engineering Research Center for Sugarcane, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
| | - Tian-Jie Zhang
- National Engineering Research Center for Sugarcane, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
| | - Yong Fang
- Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agriculture Science, Changsha 410125, China; Key Laboratory of National Forestry and Grassland Administration on Pest Chemical Control, China Agricultural University, Beijing 100193, China.
| | - Can-Ping Pan
- Key Laboratory of National Forestry and Grassland Administration on Pest Chemical Control, China Agricultural University, Beijing 100193, China
| | - Hua-Ying Fu
- National Engineering Research Center for Sugarcane, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
| | - San-Ji Gao
- National Engineering Research Center for Sugarcane, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
| | - Jin-da Wang
- National Engineering Research Center for Sugarcane, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China.
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24
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Macioszek VK, Jęcz T, Ciereszko I, Kononowicz AK. Jasmonic Acid as a Mediator in Plant Response to Necrotrophic Fungi. Cells 2023; 12:cells12071027. [PMID: 37048100 PMCID: PMC10093439 DOI: 10.3390/cells12071027] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2023] [Revised: 03/22/2023] [Accepted: 03/24/2023] [Indexed: 03/30/2023] Open
Abstract
Jasmonic acid (JA) and its derivatives, all named jasmonates, are the simplest phytohormones which regulate multifarious plant physiological processes including development, growth and defense responses to various abiotic and biotic stress factors. Moreover, jasmonate plays an important mediator’s role during plant interactions with necrotrophic oomycetes and fungi. Over the last 20 years of research on physiology and genetics of plant JA-dependent responses to pathogens and herbivorous insects, beginning from the discovery of the JA co-receptor CORONATINE INSENSITIVE1 (COI1), research has speeded up in gathering new knowledge on the complexity of plant innate immunity signaling. It has been observed that biosynthesis and accumulation of jasmonates are induced specifically in plants resistant to necrotrophic fungi (and also hemibiotrophs) such as mostly investigated model ones, i.e., Botrytis cinerea, Alternaria brassicicola or Sclerotinia sclerotiorum. However, it has to be emphasized that the activation of JA-dependent responses takes place also during susceptible interactions of plants with necrotrophic fungi. Nevertheless, many steps of JA function and signaling in plant resistance and susceptibility to necrotrophs still remain obscure. The purpose of this review is to highlight and summarize the main findings on selected steps of JA biosynthesis, perception and regulation in the context of plant defense responses to necrotrophic fungal pathogens.
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25
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Welling MT, Deseo MA, O’Brien M, Clifton J, Bacic A, Doblin MS. Metabolomic analysis of methyl jasmonate treatment on phytocannabinoid production in Cannabis sativa. FRONTIERS IN PLANT SCIENCE 2023; 14:1110144. [PMID: 37025140 PMCID: PMC10070988 DOI: 10.3389/fpls.2023.1110144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Accepted: 03/07/2023] [Indexed: 06/19/2023]
Abstract
Cannabis sativa is a multi-use and chemically complex plant which is utilized for food, fiber, and medicine. Plants produce a class of psychoactive and medicinally important specialized metabolites referred to as phytocannabinoids (PCs). The phytohormone methyl jasmonate (MeJA) is a naturally occurring methyl ester of jasmonic acid and a product of oxylipin biosynthesis which initiates and regulates the biosynthesis of a broad range of specialized metabolites across a number of diverse plant lineages. While the effects of exogenous MeJA application on PC production has been reported, treatments have been constrained to a narrow molar range and to the targeted analysis of a small number of compounds. Using high-resolution mass spectrometry with data-dependent acquisition, we examined the global metabolomic effects of MeJA in C. sativa to explore oxylipin-mediated regulation of PC biosynthesis and accumulation. A dose-response relationship was observed, with an almost two-fold increase in PC content found in inflorescences of female clones treated with 15 mM MeJA compared to the control group. Comparison of the inflorescence metabolome across MeJA treatments coupled with targeted transcript analysis was used to elucidate key regulatory components contributing to PC production and metabolism more broadly. Revealing these biological signatures improves our understanding of the role of the oxylipin pathway in C. sativa and provides putative molecular targets for the metabolic engineering and optimization of chemical phenotype for medicinal and industrial end-uses.
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26
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Hornstein ED, Charles M, Franklin M, Edwards B, Vintila S, Kleiner M, Sederoff H. Re-engineering a lost trait: IPD3, a master regulator of arbuscular mycorrhizal symbiosis, affects genes for immunity and metabolism of non-host Arabidopsis when restored long after its evolutionary loss. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.03.06.531368. [PMID: 36945518 PMCID: PMC10028889 DOI: 10.1101/2023.03.06.531368] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/09/2023]
Abstract
Arbuscular mycorrhizal symbiosis (AM) is a beneficial trait originating with the first land plants, which has subsequently been lost by species scattered throughout the radiation of plant diversity to the present day, including the model Arabidopsis thaliana. To explore why an apparently beneficial trait would be repeatedly lost, we generated Arabidopsis plants expressing a constitutively active form of Interacting Protein of DMI3, a key transcription factor that enables AM within the Common Symbiosis Pathway, which was lost from Arabidopsis along with the AM host trait. We characterize the transcriptomic effect of expressing IPD3 in Arabidopsis with and without exposure to the AM fungus (AMF) Rhizophagus irregularis, and compare these results to the AM model Lotus japonicus and its ipd3 knockout mutant cyclops-4. Despite its long history as a non-AM species, restoring IPD3 in the form of its constitutively active DNA-binding domain to Arabidopsis altered expression of specific gene networks. Surprisingly, the effect of expressing IPD3 in Arabidopsis and knocking it out in Lotus was strongest in plants not exposed to AMF, which is revealed to be due to changes in IPD3 genotype causing a transcriptional state which partially mimics AMF exposure in non-inoculated plants. Our results indicate that despite the long interval since loss of AM and IPD3 in Arabidopsis, molecular connections to symbiosis machinery remain in place in this nonAM species, with implications for both basic science and the prospect of engineering this trait for agriculture.
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Affiliation(s)
- Eli D Hornstein
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Melodi Charles
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Megan Franklin
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Brianne Edwards
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Simina Vintila
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Manuel Kleiner
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Heike Sederoff
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
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27
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Recent Advances in Research into Jasmonate Biosynthesis and Signaling Pathways in Agricultural Crops and Products. Processes (Basel) 2023. [DOI: 10.3390/pr11030736] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2023] Open
Abstract
Jasmonates (JAs) are phospholipid-derived hormones that regulate plant development and responses to environmental stress. The synthesis of JAs and the transduction of their signaling pathways are precisely regulated at multiple levels within and outside the nucleus as a result of a combination of genetic and epigenetic regulation. In this review, we focus on recent advances in the regulation of JA biosynthesis and their signaling pathways. The biosynthesis of JAs was found to be regulated with an autocatalytic amplification mechanism via the MYC2 regulation pathway and inhibited by an autonomous braking mechanism via the MYC2-targeting bHLH1 protein to terminate JA signals in a highly ordered manner. The biological functions of JAs mainly include the promotion of fruit ripening at the initial stage via ethylene-dependent and independent ways, the regulation of mature coloring via regulating the degradation of chlorophyll and the metabolism of anthocyanin, and the improvement of aroma components via the regulation of fatty acid and aldehyde alcohol metabolism in agricultural crops. JA signaling pathways also function in the enhancement of biotic and abiotic stress resistance via the regulation of secondary metabolism and the redox system, and they relieve cold damage to crops through improving the stability of the cell membrane. These recently published findings indicate that JAs are an important class of plant hormones necessary for regulating plant growth and development, ripening, and the resistance to stress in agricultural crops and products.
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28
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Tran HTD, Nguyen HTT, Huynh TB, Nguyen HN, Nguyen LT, Tran NU, Pham BTM, Nguyen DH, Tran T, Nguyen TTH. Functional characterization of a bark-specific monoterpene synthase potentially involved in wounding- and methyl jasmonate-induced linalool emission in rubber (Hevea brasiliensis). JOURNAL OF PLANT PHYSIOLOGY 2023; 282:153942. [PMID: 36805520 DOI: 10.1016/j.jplph.2023.153942] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 01/26/2023] [Accepted: 01/29/2023] [Indexed: 06/18/2023]
Abstract
Rubber (Hevea brasiliensis) is a latex-producing plant that often encounters mechanical wounding, as well as pathogen and pest attacks through wound sites during and after tapping. Terpenoids play an important role in the ecological interactions of many plant species, and their diversity is mainly generated by enzymes known as terpene synthases (TPS). In this study, one cDNA sequence encoding a putative terpene synthase, HbTPS20, was obtained from the bark tissues of H. brasiliensis. The encoded protein contains 610 amino acids with a putative N-terminal plastid transit peptide of approximately 70 residues. It belongs to the TPS-b subfamily. Further phylogenetic analysis showed that HbTPS20 formed a separate branch that diverged from the progenitor of all other potentially functional terpene synthases of the rubber TPS-b subfamily. The truncated HbTPS20 without the signal peptide coding sequence was successfully expressed in E. coli and in vitro enzymatic assays with geranyl diphosphate (GPP) or neryl diphosphate (NPP) as a substrate defined HbTPS20 as an active linalool synthase (HbLIS) with the ability to produce linalool as the principal product. RT-qPCR analysis showed that the highest transcript levels of HbTPS20 were found in barks, and this gene was expressed at 2.26- and 250-fold greater levels in the bark tissues of wounded and MeJA-treated plants, respectively, than in those of the control plants. This indicates that this gene may be involved in the induced stress responses of rubber.
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Affiliation(s)
- Huong Thi Diem Tran
- Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam
| | - Hong Thi Thuy Nguyen
- Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam
| | - Tram Bich Huynh
- Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam
| | - Hang Nguyet Nguyen
- Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam
| | - Long Thanh Nguyen
- Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam
| | - Nhi Uyen Tran
- Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam
| | - Binh Thi My Pham
- Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam
| | - Du Huy Nguyen
- Central Laboratory of Analysis, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam
| | - Thanh Tran
- Department of Genetics and Plant Breeding, Rubber Research Institute of Vietnam, Binh Duong, 820000, Vietnam
| | - Thuong Thi Hong Nguyen
- Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh City, 700000, Vietnam; Vietnam National University, Ho Chi Minh City, 700000, Vietnam.
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29
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Zhuge XL, Du X, Xiu ZJ, He CC, Wang YM, Yang HL, Han XM. Discovery of specific catalytic activity toward IAA/FA by LaSABATHs based on genome-wide phylogenetic and enzymatic analysis of SABATH gene family from Larix kaempferi. Int J Biol Macromol 2023; 225:1562-1574. [PMID: 36442561 DOI: 10.1016/j.ijbiomac.2022.11.212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2022] [Revised: 10/08/2022] [Accepted: 11/21/2022] [Indexed: 11/27/2022]
Abstract
The SABATH methyltransferases catalyze methylation of small-molecule metabolites, which participate in plant growth, development and defense response. Given lack of genome-wide studies on gymnosperms SABATH family, the formation and functional differentiation mechanism of the Larix kaempferi SABATH gene family was systematically and exhaustively explored by analyzing gene sequence characteristics, phylogenetic relationship, expression pattern, and enzyme activities. Phylogenetic analysis showed that 247 SABATH genes from 14 land plants were divided into 4 clades, and lineage-specific gene duplication events were important factors that contributed to the evolution of the SABATH gene family in gymnosperms and angiosperms. Substrate specificity analysis of 18 Larix SABATH proteins showed that LaSABATHs could catalyze O-methylation of indole-3-acetic acid (IAA) and farnesic acid (FA), N-methylation of theobromine, and S-methylation of thiobenzoic acid. Furthermore, only LaSABATH2 and LaSABATH29 could catalyze O-methylation of FA, and only LaSABATH30 could catalyze O-methylation of IAA. Homology modeling and molecular docking studies showed the hydrogen bond formed between the His188 of LaSABATH30 and IAA and the noticeable hydrophobic IAA-binding pocket may be helpful for IAA methylation. In this study, identification of proteins with significant specific catalytic activity toward FA and IAA provided high-quality candidate genes for forest genetics and breeding.
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Affiliation(s)
- Xiang-Lin Zhuge
- National Engineering Research Center of Tree Breeding and Ecological Restoration, Institute of Tree Development and Genome Editing, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing 100083, China
| | - Xin Du
- National Engineering Research Center of Tree Breeding and Ecological Restoration, Institute of Tree Development and Genome Editing, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing 100083, China
| | - Zhi-Jing Xiu
- National Engineering Research Center of Tree Breeding and Ecological Restoration, Institute of Tree Development and Genome Editing, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing 100083, China
| | - Cheng-Cheng He
- National Engineering Research Center of Tree Breeding and Ecological Restoration, Institute of Tree Development and Genome Editing, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing 100083, China
| | - Yi-Ming Wang
- National Engineering Research Center of Tree Breeding and Ecological Restoration, Institute of Tree Development and Genome Editing, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing 100083, China
| | - Hai-Ling Yang
- National Engineering Research Center of Tree Breeding and Ecological Restoration, Institute of Tree Development and Genome Editing, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing 100083, China
| | - Xue-Min Han
- State Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China.
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30
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Sghaier N, Ayed RB, Rebai A. Application of data fusion modeling for the prediction of auxin response elements in Zea mays for food security purposes. Genomics Inform 2022; 20:e45. [PMID: 36617652 PMCID: PMC9847374 DOI: 10.5808/gi.22056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Accepted: 12/12/2022] [Indexed: 12/31/2022] Open
Abstract
Food security will be affected by climate change worldwide, particularly in the developingworld, where the most important food products originate from plants. Plants are often exposed to environmental stresses that may affect their growth, development, yield, and foodquality. Auxin is a hormone that plays a critical role in improving plants' tolerance of environmental conditions. Auxin controls the expression of many stress-responsive genes inplants by interacting with specific cis-regulatory elements called auxin-responsive elements (AuxREs). In this work, we performed an in silico prediction of AuxREs in promotersof five auxin-responsive genes in Zea mays. We applied a data fusion approach based onthe combined use of Dempster-Shafer evidence theory and fuzzy sets. Auxin has a directimpact on cell membrane proteins. The short-term auxin response may be represented bythe regulation of transmembrane gene expression. The detection of an AuxRE in the promoter of prolyl oligopeptidase (POP) in Z. mays and the 3-fold overexpression of this geneunder auxin treatment for 30 min indicated the role of POP in maize auxin response. POP isregulated by auxin to perform stress adaptation. In addition, the detection of two AuxRETGTCTC motifs in the upstream sequence of the bx1 gene suggests that bx1 can be regulated by auxin. Auxin may also be involved in the regulation of dehydration-responsive element-binding and some members of the protein kinase superfamily.
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Affiliation(s)
- Nesrine Sghaier
- Laboratory of Advanced Technology and Intelligent Systems, National Engineering School of Sousse, Sousse 4023, Tunisia,Corresponding author E-mail:
| | - Rayda Ben Ayed
- Department of Agronomy and Plant Biotechnology, National Institute of Agronomy of Tunisia (INAT), 43 Avenue Charles Nicolle, 1082 El Mahrajène, University of Carthage-Tunis, Tunisia,Laboratory of Extremophile Plants, Centre of Biotechnology of Borj-Cédria, B.P. 901, Hammam Lif 2050, TunisiaTunisia
| | - Ahmed Rebai
- Laboratory of Molecular and Cellular Screening Processes, Sfax Biotechnology Center, B.P 1177, Sfax 3018,Tunisia
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Saniewski M, Szablińska-Piernik J, Marasek-Ciołakowska A, Mitrus J, Góraj-Koniarska J, Lahuta LB, Wiczkowski W, Miyamoto K, Ueda J, Horbowicz M. Accumulation of Anthocyanins in Detached Leaves of Kalanchoë blossfeldiana: Relevance to the Effect of Methyl Jasmonate on This Process. Int J Mol Sci 2022; 24:ijms24010626. [PMID: 36614068 PMCID: PMC9820172 DOI: 10.3390/ijms24010626] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Revised: 12/24/2022] [Accepted: 12/26/2022] [Indexed: 12/31/2022] Open
Abstract
Accumulation of anthocyanins in detached leaves and in excised stems of Kalanchoë blossfeldiana kept under natural light conditions in the presence or absence of methyl jasmonate (JA-Me) was investigated. When the abaxial surface of detached leaves was held lower than the adaxial surface (the normal or natural position) under natural light conditions, anthocyanins were not accumulated on the abaxial side of the leaves. In contrast, when the adaxial surface of detached leaves was held lower than the abaxial surface (inverted position), anthocyanins were highly accumulated on the abaxial side of the leaves. These phenomena were independent of the growth stage of K. blossfeldiana as well as photoperiod. Application of JA-Me in lanolin paste significantly inhibited anthocyanin accumulation induced on the abaxial side of detached leaves held in an inverted position in a dose-dependent manner. Anthocyanin accumulation in the excised stem in response to natural light was also significantly inhibited by JA-Me in lanolin paste. Possible mechanisms of anthocyanin accumulation on the abaxial side of detached K. blossfeldiana leaves held in an inverted position under natural light conditions and the inhibitory effect of JA-Me on this process are described. The accompanying changes in the content of primary metabolites and histological analyses were also described.
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Affiliation(s)
- Marian Saniewski
- The National Institute of Horticultural Research, Konstytucji 3 Maja 1/3, 96-100 Skierniewice, Poland
- Correspondence: (M.S.); (M.H.)
| | - Joanna Szablińska-Piernik
- Department of Plant Physiology, Genetics and Biotechnology, University of Warmia and Mazury in Olsztyn, Oczapowskiego 1A, 10-719 Olsztyn, Poland
| | | | - Joanna Mitrus
- Institute of Biological Sciences, Siedlce University of Natural Sciences and Humanities, Prusa 14, 08-110 Siedlce, Poland
| | - Justyna Góraj-Koniarska
- The National Institute of Horticultural Research, Konstytucji 3 Maja 1/3, 96-100 Skierniewice, Poland
| | - Lesław B. Lahuta
- Department of Plant Physiology, Genetics and Biotechnology, University of Warmia and Mazury in Olsztyn, Oczapowskiego 1A, 10-719 Olsztyn, Poland
| | - Wiesław Wiczkowski
- Department of Chemistry and Biodynamics of Food, Institute of Animal Reproduction and Food Research of the Polish Academy of Sciences, Tuwima 10, 10-748 Olsztyn, Poland
| | - Kensuke Miyamoto
- Faculty of Liberal Arts, Sciences and Global Education, Osaka Metropolitan University, 1-1 Gakuen-cho, Naka-ku, Sakai 599-8531, Osaka, Japan
| | - Junichi Ueda
- Department of Biological Science, Graduate School of Science, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai 599-8531, Osaka, Japan
| | - Marcin Horbowicz
- Department of Plant Physiology, Genetics and Biotechnology, University of Warmia and Mazury in Olsztyn, Oczapowskiego 1A, 10-719 Olsztyn, Poland
- Correspondence: (M.S.); (M.H.)
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Lashley A, Miller R, Provenzano S, Jarecki SA, Erba P, Salim V. Functional Diversification and Structural Origins of Plant Natural Product Methyltransferases. Molecules 2022; 28:molecules28010043. [PMID: 36615239 PMCID: PMC9822479 DOI: 10.3390/molecules28010043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2022] [Revised: 12/13/2022] [Accepted: 12/15/2022] [Indexed: 12/24/2022] Open
Abstract
In plants, methylation is a common step in specialized metabolic pathways, leading to a vast diversity of natural products. The methylation of these small molecules is catalyzed by S-adenosyl-l-methionine (SAM)-dependent methyltransferases, which are categorized based on the methyl-accepting atom (O, N, C, S, or Se). These methyltransferases are responsible for the transformation of metabolites involved in plant defense response, pigments, and cell signaling. Plant natural product methyltransferases are part of the Class I methyltransferase-superfamily containing the canonical Rossmann fold. Recent advances in genomics have accelerated the functional characterization of plant natural product methyltransferases, allowing for the determination of substrate specificities and regioselectivity and further realizing the potential for enzyme engineering. This review compiles known biochemically characterized plant natural product methyltransferases that have contributed to our knowledge in the diversification of small molecules mediated by methylation steps.
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Affiliation(s)
- Audrey Lashley
- Department of Biological Sciences, Louisiana State University, Shreveport, LA 71115, USA
| | - Ryan Miller
- Department of Biological Sciences, Louisiana State University, Shreveport, LA 71115, USA
- School of Medicine, Louisiana State University Health New Orleans, New Orleans, LA 70112, USA
| | - Stephanie Provenzano
- Department of Biological Sciences, Louisiana State University, Shreveport, LA 71115, USA
- School of Medicine, Louisiana State University Health Shreveport, Shreveport, LA 71103, USA
| | - Sara-Alexis Jarecki
- Department of Biological Sciences, Louisiana State University, Shreveport, LA 71115, USA
| | - Paul Erba
- Department of Biological Sciences, Louisiana State University, Shreveport, LA 71115, USA
- School of Medicine, Louisiana State University Health New Orleans, New Orleans, LA 70112, USA
| | - Vonny Salim
- Department of Biological Sciences, Louisiana State University, Shreveport, LA 71115, USA
- Correspondence:
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Nowicka B. Modifications of Phytohormone Metabolism Aimed at Stimulation of Plant Growth, Improving Their Productivity and Tolerance to Abiotic and Biotic Stress Factors. PLANTS (BASEL, SWITZERLAND) 2022; 11:3430. [PMID: 36559545 PMCID: PMC9781743 DOI: 10.3390/plants11243430] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2022] [Revised: 12/05/2022] [Accepted: 12/06/2022] [Indexed: 06/17/2023]
Abstract
Due to the growing human population, the increase in crop yield is an important challenge for modern agriculture. As abiotic and biotic stresses cause severe losses in agriculture, it is also crucial to obtain varieties that are more tolerant to these factors. In the past, traditional breeding methods were used to obtain new varieties displaying demanded traits. Nowadays, genetic engineering is another available tool. An important direction of the research on genetically modified plants concerns the modification of phytohormone metabolism. This review summarizes the state-of-the-art research concerning the modulation of phytohormone content aimed at the stimulation of plant growth and the improvement of stress tolerance. It aims to provide a useful basis for developing new strategies for crop yield improvement by genetic engineering of phytohormone metabolism.
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Affiliation(s)
- Beatrycze Nowicka
- Department of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387 Kraków, Poland
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Savchenko T, Degtyaryov E, Radzyukevich Y, Buryak V. Therapeutic Potential of Plant Oxylipins. Int J Mol Sci 2022; 23:ijms232314627. [PMID: 36498955 PMCID: PMC9741157 DOI: 10.3390/ijms232314627] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 11/19/2022] [Accepted: 11/21/2022] [Indexed: 11/25/2022] Open
Abstract
For immobile plants, the main means of protection against adverse environmental factors is the biosynthesis of various secondary (specialized) metabolites. The extreme diversity and high biological activity of these metabolites determine the researchers' interest in plants as a source of therapeutic agents. Oxylipins, oxygenated derivatives of fatty acids, are particularly promising in this regard. Plant oxylipins, which are characterized by a diversity of chemical structures, can exert protective and therapeutic properties in animal cells. While the therapeutic potential of some classes of plant oxylipins, such as jasmonates and acetylenic oxylipins, has been analyzed thoroughly, other oxylipins are barely studied in this regard. Here, we present a comprehensive overview of the therapeutic potential of all major classes of plant oxylipins, including derivatives of acetylenic fatty acids, jasmonates, six- and nine-carbon aldehydes, oxy-, epoxy-, and hydroxy-derivatives of fatty acids, as well as spontaneously formed phytoprostanes and phytofurans. The presented analysis will provide an impetus for further research investigating the beneficial properties of these secondary metabolites and bringing them closer to practical applications.
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Affiliation(s)
- Tatyana Savchenko
- Institute of Basic Biological Problems, Pushchino Scientific Center for Biological Research, Russian Academy of Sciences, 142290 Pushchino, Russia
| | - Evgeny Degtyaryov
- Institute of Basic Biological Problems, Pushchino Scientific Center for Biological Research, Russian Academy of Sciences, 142290 Pushchino, Russia
- Puschchino State Institute of Natural Sciences, Prospect Nauki st., 3, 142290 Pushchino, Russia
| | - Yaroslav Radzyukevich
- Institute of Basic Biological Problems, Pushchino Scientific Center for Biological Research, Russian Academy of Sciences, 142290 Pushchino, Russia
| | - Vlada Buryak
- Faculty of Biotechnology, Moscow State University, Leninskie Gory 1, str. 51, 119991 Moscow, Russia
- Branch of Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 142290 Pushchino, Russia
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Singh R, Dwivedi A, Singh Y, Kumar K, Ranjan A, Verma PK. A Global Transcriptome and Co-expression Analysis Reveals Robust Host Defense Pathway Reprogramming and Identifies Key Regulators of Early Phases of Cicer-Ascochyta Interactions. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2022; 35:1034-1047. [PMID: 35939621 DOI: 10.1094/mpmi-06-22-0134-r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Ascochyta blight (AB) caused by the filamentous fungus Ascochyta rabiei is a major threat to global chickpea production. The mechanisms underlying chickpea response to A. rabiei remain elusive to date. Here, we investigated the comparative transcriptional dynamics of AB-resistant and -susceptible chickpea genotypes upon A. rabiei infection, to understand the early host defense response. Our findings revealed that AB-resistant plants underwent rapid and extensive transcriptional reprogramming compared with a susceptible host. At the early stage (24 h postinoculation [hpi]), mainly cell-wall remodeling and secondary metabolite pathways were highly activated, while differentially expressed genes related to signaling components, such as protein kinases, transcription factors, and hormonal pathways, show a remarkable upsurge at 72 hpi, especially in the resistant genotype. Notably, our data suggest an imperative role of jasmonic acid, ethylene, and abscisic acid signaling in providing immunity against A. rabiei. Furthermore, gene co-expression networks and modules corroborated the importance of cell-wall remodeling, signal transduction, and phytohormone pathways. Hub genes such as MYB14, PRE6, and MADS-SOC1 discovered in these modules might be the master regulators governing chickpea immunity. Overall, we not only provide novel insights for comprehensive understanding of immune signaling components mediating AB resistance and susceptibility at early Cicer-Ascochyta interactions but, also, offer a valuable resource for developing AB-resistant chickpea. [Formula: see text] Copyright © 2022 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
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Affiliation(s)
- Ritu Singh
- National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Aditi Dwivedi
- National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Yeshveer Singh
- National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Kamal Kumar
- National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Aashish Ranjan
- National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Praveen Kumar Verma
- National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg, New Delhi 110067, India
- Plant Immunity Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India
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Dong H, Zhang W, Li Y, Feng Y, Wang X, Liu Z, Li D, Wen X, Ma S, Zhang X. Overexpression of salicylic acid methyltransferase reduces salicylic acid-mediated pathogen resistance in poplar. FRONTIERS IN PLANT SCIENCE 2022; 13:973305. [PMID: 36388494 PMCID: PMC9660245 DOI: 10.3389/fpls.2022.973305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Accepted: 09/28/2022] [Indexed: 06/16/2023]
Abstract
Salicylic acid (SA) is generally considered to be a critical signal transduction factor in plant defenses against pathogens. It could be converted to methyl salicylate (MeSA) for remote signals by salicylic acid methyltransferase (SAMT) and converted back to SA by SA-binding protein 2 (SABP2). In order to verify the function of SAMT in poplar plants, we isolated the full-length cDNA sequence of PagSAMT from 84K poplar and cultivated PagSAMT overexpression lines (OE-2 isolate) to test its role in SA-mediated defenses against the virulent fungal pathogen Botryosphaeria dothidea. Our results showed that after inoculation with B. dothidea, OE-2 significantly increased MeSA content and reduced SA content which is associated with increased expression of SAMT in both infected and uninfected leaves, when compared against the wild type (WT). Additionally, SAMT overexpression plant lines (OE-2) exhibited higher expression of pathogenesis-related genes PR-1 and PR-5, but were still susceptible to B. dothidea suggesting that in poplar SA might be responsible for resistance against this pathogen. This study expands the current understanding of joint regulation of SAMT and SABP2 and the balance between SA and MeSA in poplar responses to pathogen invasion.
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Affiliation(s)
- Huixia Dong
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- College of Life Science, Henan Normal University, Xinxiang, China
| | - Wei Zhang
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Yongxia Li
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Yuqian Feng
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Xuan Wang
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Zhenkai Liu
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Dongzhen Li
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Xiaojian Wen
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Shuai Ma
- Resources Management, Chinese Academy of Forestry, Beijing, China
| | - Xingyao Zhang
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
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Orf I, Tenenboim H, Omranian N, Nikoloski Z, Fernie AR, Lisec J, Brotman Y, Bromke MA. Transcriptomic and Metabolomic Analysis of a Pseudomonas-Resistant versus a Susceptible Arabidopsis Accession. Int J Mol Sci 2022; 23:ijms232012087. [PMID: 36292941 PMCID: PMC9603445 DOI: 10.3390/ijms232012087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 10/06/2022] [Accepted: 10/08/2022] [Indexed: 11/24/2022] Open
Abstract
Accessions of one plant species may show significantly different levels of susceptibility to stresses. The Arabidopsis thaliana accessions Col-0 and C24 differ significantly in their resistance to the pathogen Pseudomonas syringae pv. tomato (Pst). To help unravel the underlying mechanisms contributing to this naturally occurring variance in resistance to Pst, we analyzed changes in transcripts and compounds from primary and secondary metabolism of Col-0 and C24 at different time points after infection with Pst. Our results show that the differences in the resistance of Col-0 and C24 mainly involve mechanisms of salicylic-acid-dependent systemic acquired resistance, while responses of jasmonic-acid-dependent mechanisms are shared between the two accessions. In addition, arginine metabolism and differential activity of the biosynthesis pathways of aliphatic glucosinolates and indole glucosinolates may also contribute to the resistance. Thus, this study highlights the difference in the defense response strategies utilized by different genotypes.
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Affiliation(s)
- Isabel Orf
- Department of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel
| | - Hezi Tenenboim
- Department of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel
| | - Nooshin Omranian
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam, Germany
- Bioinformatics Group, Institute of Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Str. 24-25, 14476 Potsdam, Germany
| | - Zoran Nikoloski
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam, Germany
- Bioinformatics Group, Institute of Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Str. 24-25, 14476 Potsdam, Germany
| | - Alisdair R. Fernie
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Jan Lisec
- Department of Analytical Chemistry, Federal Institute for Materials Research and Testing, Richard-Willstätter-Straße 11, 12489 Berlin, Germany
| | - Yariv Brotman
- Department of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel
- Correspondence: (Y.B.); (M.A.B.)
| | - Mariusz A. Bromke
- Department of Biochemistry and Immunochemistry, Wroclaw Medical University, ul. Chałubińskiego 10, 50-367 Wrocław, Poland
- Correspondence: (Y.B.); (M.A.B.)
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Huang X, Tanveer M, Min Y, Shabala S. Melatonin as a regulator of plant ionic homeostasis: implications for abiotic stress tolerance. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:5886-5902. [PMID: 35640481 DOI: 10.1093/jxb/erac224] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Accepted: 05/23/2022] [Indexed: 06/15/2023]
Abstract
Melatonin is a highly conserved and ubiquitous molecule that operates upstream of a broad array of receptors in animal systems. Since melatonin was discovered in plants in 1995, hundreds of papers have been published revealing its role in plant growth, development, and adaptive responses to the environment. This paper summarizes the current state of knowledge of melatonin's involvement in regulating plant ion homeostasis and abiotic stress tolerance. The major topics covered here are: (i) melatonin's control of H+-ATPase activity and its implication for plant adaptive responses to various abiotic stresses; (ii) regulation of the reactive oxygen species (ROS)-Ca2+ hub by melatonin and its role in stress signaling; and (iii) melatonin's regulation of ionic homeostasis via hormonal cross-talk. We also show that the properties of the melatonin molecule allow its direct scavenging of ROS, thus preventing negative effects of ROS-induced activation of ion channels. The above 'desensitization' may play a critical role in preventing stress-induced K+ loss from the cytosol as well as maintaining basic levels of cytosolic Ca2+ required for optimal cell operation. Future studies should focus on revealing the molecular identity of transporters that could be directly regulated by melatonin and providing a bioinformatic analysis of evolutionary aspects of melatonin sensing and signaling.
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Affiliation(s)
- Xin Huang
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, China
| | - Mohsin Tanveer
- Tasmanian Institute of Agriculture, University of Tasmania, Tas, Hobart, Australia
| | - Yu Min
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, China
| | - Sergey Shabala
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, China
- Tasmanian Institute of Agriculture, University of Tasmania, Tas, Hobart, Australia
- School of Biological Sciences, University of Western Australia, Perth, WA, Australia
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Stroud EA, Jayaraman J, Templeton MD, Rikkerink EHA. Comparison of the pathway structures influencing the temporal response of salicylate and jasmonate defence hormones in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2022; 13:952301. [PMID: 36160984 PMCID: PMC9504473 DOI: 10.3389/fpls.2022.952301] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Accepted: 08/01/2022] [Indexed: 06/16/2023]
Abstract
Defence phytohormone pathways evolved to recognize and counter multiple stressors within the environment. Salicylic acid responsive pathways regulate the defence response to biotrophic pathogens whilst responses to necrotrophic pathogens, herbivory, and wounding are regulated via jasmonic acid pathways. Despite their contrasting roles in planta, the salicylic acid and jasmonic acid defence networks share a common architecture, progressing from stages of biosynthesis, to modification, regulation, and response. The unique structure, components, and regulation of each stage of the defence networks likely contributes, in part, to the speed, establishment, and longevity of the salicylic acid and jasmonic acid signaling pathways in response to hormone treatment and various biotic stressors. Recent advancements in the understanding of the Arabidopsis thaliana salicylic acid and jasmonic acid signaling pathways are reviewed here, with a focus on how the structure of the pathways may be influencing the temporal regulation of the defence responses, and how biotic stressors and the many roles of salicylic acid and jasmonic acid in planta may have shaped the evolution of the signaling networks.
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Affiliation(s)
- Erin A. Stroud
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
| | - Jay Jayaraman
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
- Bioprotection Aotearoa, Lincoln, New Zealand
| | - Matthew D. Templeton
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
- Bioprotection Aotearoa, Lincoln, New Zealand
| | - Erik H. A. Rikkerink
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
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40
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Zhao Y, Vlasselaer L, Ribeiro B, Terzoudis K, Van den Ende W, Hertog M, Nicolaï B, De Coninck B. Constitutive Defense Mechanisms Have a Major Role in the Resistance of Woodland Strawberry Leaves Against Botrytis cinerea. FRONTIERS IN PLANT SCIENCE 2022; 13:912667. [PMID: 35874021 PMCID: PMC9298464 DOI: 10.3389/fpls.2022.912667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Accepted: 06/08/2022] [Indexed: 06/15/2023]
Abstract
The necrotrophic fungus Botrytis cinerea is a major threat to strawberry cultivation worldwide. By screening different Fragaria vesca genotypes for susceptibility to B. cinerea, we identified two genotypes with different resistance levels, a susceptible genotype F. vesca ssp. vesca Tenno 3 (T3) and a moderately resistant genotype F. vesca ssp. vesca Kreuzkogel 1 (K1). These two genotypes were used to identify the molecular basis for the increased resistance of K1 compared to T3. Fungal DNA quantification and microscopic observation of fungal growth in woodland strawberry leaves confirmed that the growth of B. cinerea was restricted during early stages of infection in K1 compared to T3. Gene expression analysis in both genotypes upon B. cinerea inoculation suggested that the restricted growth of B. cinerea was rather due to the constitutive resistance mechanisms of K1 instead of the induction of defense responses. Furthermore, we observed that the amount of total phenolics, total flavonoids, glucose, galactose, citric acid and ascorbic acid correlated positively with higher resistance, while H2O2 and sucrose correlated negatively. Therefore, we propose that K1 leaves are more resistant against B. cinerea compared to T3 leaves, prior to B. cinerea inoculation, due to a lower amount of innate H2O2, which is attributed to a higher level of antioxidants and antioxidant enzymes in K1. To conclude, this study provides important insights into the resistance mechanisms against B. cinerea, which highly depend on the innate antioxidative profile and specialized metabolites of woodland strawberry leaves.
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Affiliation(s)
- Yijie Zhao
- Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Leuven, Belgium
- Division of Mechatronics, Biostatistics and Sensors, Department of Biosystems, KU Leuven, Leuven, Belgium
- KU Leuven Plant Institute, Heverlee, Belgium
| | - Liese Vlasselaer
- Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Leuven, Belgium
- KU Leuven Plant Institute, Heverlee, Belgium
| | - Bianca Ribeiro
- Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Leuven, Belgium
- KU Leuven Plant Institute, Heverlee, Belgium
| | - Konstantinos Terzoudis
- Division of Mechatronics, Biostatistics and Sensors, Department of Biosystems, KU Leuven, Leuven, Belgium
- KU Leuven Plant Institute, Heverlee, Belgium
| | - Wim Van den Ende
- KU Leuven Plant Institute, Heverlee, Belgium
- Laboratory of Molecular Plant Biology, Department of Biology, KU Leuven, Leuven, Belgium
| | - Maarten Hertog
- Division of Mechatronics, Biostatistics and Sensors, Department of Biosystems, KU Leuven, Leuven, Belgium
- KU Leuven Plant Institute, Heverlee, Belgium
| | - Bart Nicolaï
- Division of Mechatronics, Biostatistics and Sensors, Department of Biosystems, KU Leuven, Leuven, Belgium
- KU Leuven Plant Institute, Heverlee, Belgium
- Flanders Centre of Postharvest Technology, Leuven, Belgium
| | - Barbara De Coninck
- Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Leuven, Belgium
- KU Leuven Plant Institute, Heverlee, Belgium
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Conjunctive Analyses of BSA-Seq and BSR-Seq Unveil the Msβ-GAL and MsJMT as Key Candidate Genes for Cytoplasmic Male Sterility in Alfalfa (Medicago sativa L.). Int J Mol Sci 2022; 23:ijms23137172. [PMID: 35806189 PMCID: PMC9266382 DOI: 10.3390/ijms23137172] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 06/21/2022] [Accepted: 06/25/2022] [Indexed: 11/17/2022] Open
Abstract
Knowing the molecular mechanism of male sterility in alfalfa is important to utilize the heterosis more effectively. However, the molecular mechanisms of male sterility in alfalfa are still unclear. In this study, the bulked segregant analysis (BSA) and bulked segregant RNA-seq (BSR) were performed with F2 separation progeny to study the molecular mechanism of male sterility in alfalfa. The BSA-seq analysis was located in a candidate region on chromosome 5 containing 626 candidate genes which were associated with male sterility in alfalfa, while the BSR-seq analysis filtered seven candidate DEGs related to male sterility, and these candidate genes including EF-Tu, β-GAL, CESA, PHGDH, and JMT. The conjunctive analyses of BSR and BSA methods revealed that the genes of Msβ-GAL and MsJMT are the common detected candidate genes involved in male sterility in alfalfa. Our research provides a theory basis for further study of the molecular mechanism of male sterility in alfalfa and significant information for the genetic breeding of Medicago sativa.
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Zhang Z, Lu S, Yu W, Ehsan S, Zhang Y, Jia H, Fang J. Jasmonate increases terpene synthase expression, leading to strawberry resistance to Botrytis cinerea infection. PLANT CELL REPORTS 2022; 41:1243-1260. [PMID: 35325290 DOI: 10.1007/s00299-022-02854-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Accepted: 02/25/2022] [Indexed: 06/14/2023]
Abstract
Jasmonate induced FaTPS1 to produce terpene, and overexpression FaTPS1 led to fruit resistant against B. cinerea infection, FaMYC2 induced FaTPS1 by binding to its promoter that downstream of jasmonate. Jasmonic acid (JA) and its derivatives are associated with plant defence responses against pathogenic organisms. In the present study, a total of 10,631 differentially expressed genes, 239 differentially expressed proteins, and 229 differential metabolites were screened and found to be mainly involved in pathogen perception, hormone biosynthesis and signal transduction, photosynthesis, and secondary metabolism. In strawberry fruits, methyl jasmonate (MeJA) induced FaTPS1 expression and quickly increased the terpene content. Furthermore, FaTPS1 overexpression increased the emission of sesquiterpenes, especially germacrene D, and improved strawberry resistance against Botrytis cinerea infection, although the knockdown of FaTPS1 increased its susceptibility to the same pathogen. Using a yeast one-hybrid assay and transient expression analysis, we demonstrated that FaMYC2 can bind to the G-box element in the promoter region of FaTPS1, thus inducing FaTPS1 expression. MeJA also stimulated FaMYC2 expression and regulated downstream signalling cascades. Moreover, we presented a possible model of the new signalling pathway of MeJA-mediated strawberry resistance to B. cinerea.
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Affiliation(s)
- Zibo Zhang
- Key Laboratory of Genetics and Fruit Development, College of Horticulture, Nanjing Agricultural University, 1st Weigang Road, Nanjing, 210095, China
| | - Suwen Lu
- Key Laboratory of Genetics and Fruit Development, College of Horticulture, Nanjing Agricultural University, 1st Weigang Road, Nanjing, 210095, China
| | - Wenbin Yu
- Key Laboratory of Genetics and Fruit Development, College of Horticulture, Nanjing Agricultural University, 1st Weigang Road, Nanjing, 210095, China
- NJAU (Suqian) Academy of Protected Horticultures, Suqian, China
| | - Sadeghnezhad Ehsan
- Key Laboratory of Genetics and Fruit Development, College of Horticulture, Nanjing Agricultural University, 1st Weigang Road, Nanjing, 210095, China
| | - Yanping Zhang
- Suzhou Polytechnic Institute of Agriculture, 279 Xiyuan Road, Suzhou, 215008, China
- NJAU (Suqian) Academy of Protected Horticultures, Suqian, China
| | - Haifeng Jia
- Key Laboratory of Genetics and Fruit Development, College of Horticulture, Nanjing Agricultural University, 1st Weigang Road, Nanjing, 210095, China.
- NJAU (Suqian) Academy of Protected Horticultures, Suqian, China.
| | - Jinggui Fang
- Key Laboratory of Genetics and Fruit Development, College of Horticulture, Nanjing Agricultural University, 1st Weigang Road, Nanjing, 210095, China
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Wan S, Xin XF. Regulation and integration of plant jasmonate signaling: a comparative view of monocot and dicot. J Genet Genomics 2022; 49:704-714. [PMID: 35452856 DOI: 10.1016/j.jgg.2022.04.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2022] [Revised: 04/01/2022] [Accepted: 04/02/2022] [Indexed: 10/18/2022]
Abstract
The phytohormone jasmonate plays a pivotal role in various aspects of plant life, including developmental programs and defense against pests and pathogens. A large body of knowledge on jasmonate biosynthesis, signal transduction as well as its functions in diverse plant processes has been gained in the past two decades. In addition, there exists extensive crosstalk between jasmonate pathway and other phytohormone pathways, such as salicylic acid (SA) and gibberellin (GA), in co-regulation of plant immune status, fine-tuning the balance of plant growth and defense, and so on, which were mostly learned from studies in the dicotyledonous model plants Arabidopsis thaliana and tomato but much less in monocot. Interestingly, existing evidence suggests both conservation and functional divergence in terms of core components of jasmonate pathway, its biological functions and signal integration with other phytohormones, between monocot and dicot. In this review, we summarize the current understanding on JA signal initiation, perception and regulation, and highlight the distinctive characteristics in different lineages of plants.
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Affiliation(s)
- Shiwei Wan
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China
| | - Xiu-Fang Xin
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China; University of Chinese Academy of Sciences, Beijing 100049, China; CAS-JIC Center of Excellence for Plant and Microbial Sciences (CEPAMS), Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China.
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A carlactonoic acid methyltransferase that contributes to the inhibition of shoot branching in Arabidopsis. Proc Natl Acad Sci U S A 2022; 119:e2111565119. [PMID: 35344437 PMCID: PMC9168466 DOI: 10.1073/pnas.2111565119] [Citation(s) in RCA: 24] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Strigolactones (SLs) are a group of apocarotenoid hormones, which regulates shoot branching and other diverse developmental processes in plants. The major bioactive form(s) of SLs as endogenous hormones has not yet been clarified. Here, we identify an Arabidopsis methyltransferase, CLAMT, responsible for the conversion of an inactive precursor to a biologically active SL that can interact with the SL receptor in vitro. Reverse genetic analysis showed that this enzyme plays an essential role in inhibiting shoot branching. This mutant also contributed to specifying the SL-related metabolites that could move from root to shoot in grafting experiments. Our work has identified a key enzyme necessary for the production of the bioactive form(s) of SLs. Strigolactones (SLs) are plant hormones that regulate shoot branching and diverse developmental processes. They are biosynthesized from carotenoid molecules via a key biosynthetic precursor called carlactone (CL) and its carboxylated analog, carlactonoic acid (CLA). We have previously identified the methyl esterified derivative of CLA, methyl carlactonoate (MeCLA), as an endogenous SL-like molecule in Arabidopsis. Neither CL nor CLA could interact with the receptor protein, Arabidopsis DWARF14 (AtD14), in vitro, while MeCLA could, suggesting that the methylation step of CLA is critical to convert a biologically inactive precursor to a bioactive compound in the shoot branching inhibition pathway. Here, we show that a member of the SABATH protein family (At4g36470) efficiently catalyzes methyl esterification of CLA using S-adenosyl-L-methionine (SAM) as a methyl donor. We named this enzyme CLAMT for CLA methyltransferase. The Arabidopsis loss-of-function clamt mutant accumulated CLA and had substantially reduced MeCLA content compared with wild type (WT), showing that CLAMT is the main enzyme that catalyzes CLA methylation in Arabidopsis. The clamt mutant displayed an increased branching phenotype, yet the branch number was less than that of severe SL biosynthetic mutants. Exogenously applied MeCLA, but not CLA, restored the branching phenotype of the clamt mutant. In addition, grafting experiments using the clamt and other SL biosynthetic mutants suggest that CL and CLA are transmissible from root to shoot. Taken together, our results demonstrate a significant role of CLAMT in the shoot branching inhibition pathway in Arabidopsis.
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45
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The Potential of Fatty Acids and Their Derivatives as Antifungal Agents: A Review. Toxins (Basel) 2022; 14:toxins14030188. [PMID: 35324685 PMCID: PMC8954725 DOI: 10.3390/toxins14030188] [Citation(s) in RCA: 24] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Revised: 02/14/2022] [Accepted: 03/01/2022] [Indexed: 12/18/2022] Open
Abstract
Fungal contamination presents several problems: in humans, health issues arise from infections with opportunistic filamentous fungi and yeast, while in food, fungi cause spoilage and, in particular, in the case of mycotoxigenic fungi, can cause serious health issues. Several types of fatty acids and their derivatives, oxylipins, have been found to have inhibitory effect towards fungal growth and the production of mycotoxins. The use of fatty acids as antifungals could fulfil consumer’s requests of more natural and environmentally friendly compounds, while being less likely to promote fungal resistance. In addition, due to their nature, fatty acids are easily used as food additives. In this work, we review the most relevant and recent studies on the antifungal ability of fatty acids. We focused on saturated fatty acids, unsaturated fatty acids, and oxylipins, their different impact on fungal inhibition, their proposed modes of action, and their ability to impair mycotoxin production. Applications of fatty acids as antifungals and their limitations are also addressed.
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46
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Wang J, Chen J, Huang S, Han D, Li J, Guo D. Investigating the Mechanism of Unilateral Cross Incompatibility in Longan ( Dimocarpus longan Lour.) Cultivars (Yiduo × Shixia). FRONTIERS IN PLANT SCIENCE 2022; 12:821147. [PMID: 35222456 PMCID: PMC8874016 DOI: 10.3389/fpls.2021.821147] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Accepted: 12/30/2021] [Indexed: 06/14/2023]
Abstract
Longan (Dimocarpus longan Lour.) is an important subtropical fruit tree in China. Nearly 90% of longan fruit imports from Thailand are from the cultivar Yiduo. However, we have observed that there exists a unilateral cross incompatibility (UCI) when Yiduo is used as a female parent and Shixia (a famous Chinese cultivar) as a male parent. Here, we performed a comparative transcriptome analysis coupled with microscopy of pistils from two reciprocal pollination combinations [Shixia♂ × Yiduo♀(SY) and Yiduo♀ × Shixia♂(YS)] 4, 8, 12, and 24 h after pollination. We also explored endogenous jasmonic acid (JA) and jasmonyl isoleucine (JA-Ile) levels in pistils of the crosses. The microscopic observations showed that the UCI was sporophytic. The endogenous JA and JA-Ile levels were higher in YS than in SY at the studied time points. We found 7,251 differentially expressed genes from the transcriptome analysis. Our results highlighted that genes associated with JA biosynthesis and signaling, pollen tube growth, cell wall modification, starch and sucrose biosynthesis, and protein processing in endoplasmic reticulum pathways were differentially regulated between SY and YS. We discussed transcriptomic changes in the above-mentioned pathways regarding the observed microscopic and/or endogenous hormone levels. This is the first report on the elaboration of transcriptomic changes in longan reciprocal pollination combination showing UCI. The results presented here will enable the longan breeding community to better understand the mechanisms of UCI.
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Affiliation(s)
- Jing Wang
- Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Ministry of Agriculture and Rural Affairs, Guangzhou, China
| | - Ji Chen
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Shilian Huang
- Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Ministry of Agriculture and Rural Affairs, Guangzhou, China
| | - Dongmei Han
- Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Ministry of Agriculture and Rural Affairs, Guangzhou, China
| | - Jianguang Li
- Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Ministry of Agriculture and Rural Affairs, Guangzhou, China
| | - Dongliang Guo
- Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Guangdong Provincial Key Laboratory of Tropical and Subtropical Fruit Tree Research, Ministry of Agriculture and Rural Affairs, Guangzhou, China
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Sudha M, Karthikeyan A, Madhumitha B, Veera Ranjani R, Kanimoli Mathivathana M, Dhasarathan M, Murukarthick J, Samu Shihabdeen MN, Eraivan Arutkani Aiyanathan K, Pandiyan M, Senthil N, Raveendran M. Dynamic Transcriptome Profiling of Mungbean Genotypes Unveil the Genes Respond to the Infection of Mungbean Yellow Mosaic Virus. Pathogens 2022; 11:pathogens11020190. [PMID: 35215133 PMCID: PMC8874377 DOI: 10.3390/pathogens11020190] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2021] [Revised: 01/14/2022] [Accepted: 01/21/2022] [Indexed: 12/13/2022] Open
Abstract
Yellow mosaic disease (YMD), incited by mungbean yellow mosaic virus (MYMV), is a primary viral disease that reduces mungbean production in South Asia, especially in India. There is no detailed knowledge regarding the genes and molecular mechanisms conferring resistance of mungbean to MYMV. Therefore, disclosing the genetic and molecular bases related to MYMV resistance helps to develop the mungbean genotypes with MYMV resistance. In this study, transcriptomes of mungbean genotypes, VGGRU-1 (resistant) and VRM (Gg) 1 (susceptible) infected with MYMV were compared to those of uninfected controls. The number of differentially expressed genes (DEGs) in the resistant and susceptible genotypes was 896 and 506, respectively. Among them, 275 DEGs were common between the resistant and susceptible genotypes. Functional annotation of DEGs revealed that the DEGs belonged to the following categories defense and pathogenesis, receptor-like kinases; serine/threonine protein kinases, hormone signaling, transcription factors, and chaperons, and secondary metabolites. Further, we have confirmed the expression pattern of several DEGs by quantitative real-time PCR (qRT-PCR) analysis. Collectively, the information obtained in this study unveils the new insights into characterizing the MYMV resistance and paved the way for breeding MYMV resistant mungbean in the future.
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Affiliation(s)
- Manickam Sudha
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India; (R.V.R.); (M.N.S.S.); (M.R.)
- Correspondence:
| | - Adhimoolam Karthikeyan
- Department of Biotechnology, Centre of Innovation, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai 625104, Tamil Nadu, India;
| | - Balasubramaniam Madhumitha
- Department of Plant Pathology, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai 625104, Tamil Nadu, India;
| | - Rajagopalan Veera Ranjani
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India; (R.V.R.); (M.N.S.S.); (M.R.)
| | - Mayalagu Kanimoli Mathivathana
- Department of Plant Breeding and Genetics, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai 625104, Tamil Nadu, India;
| | - Manickam Dhasarathan
- Agroclimate Research Centre, Directorate of Crop Management, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India;
| | - Jayakodi Murukarthick
- Gene Bank, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Stadt See land, 06466 Seeland, OT Gatersleben, Germany;
| | - Madiha Natchi Samu Shihabdeen
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India; (R.V.R.); (M.N.S.S.); (M.R.)
| | | | - Muthaiyan Pandiyan
- Regional Research Station, Tamil Nadu Agricultural University, Virudhachalam 606001, Tamil Nadu, India;
| | - Natesan Senthil
- Department of Plant Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India;
| | - Muthurajan Raveendran
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India; (R.V.R.); (M.N.S.S.); (M.R.)
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48
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Dubs NM, Davis BR, de Brito V, Colebrook KC, Tiefel IJ, Nakayama MB, Huang R, Ledvina AE, Hack SJ, Inkelaar B, Martins TR, Aartila SM, Albritton KS, Almuhanna S, Arnoldi RJ, Austin CK, Battle AC, Begeman GR, Bickings CM, Bradfield JT, Branch EC, Conti EP, Cooley B, Dotson NM, Evans CJ, Fries AS, Gilbert IG, Hillier WD, Huang P, Hyde KW, Jevtovic F, Johnson MC, Keeler JL, Lam A, Leach KM, Livsey JD, Lo JT, Loney KR, Martin NW, Mazahem AS, Mokris AN, Nichols DM, Ojha R, Okorafor NN, Paris JR, Reboucas TF, Sant'Anna PB, Seitz MR, Seymour NR, Slaski LK, Stemaly SO, Ulrich BR, Van Meter EN, Young ML, Barkman TJ. A collaborative classroom investigation of the evolution of SABATH methyltransferase substrate preference shifts over 120 million years of flowering plant history. Mol Biol Evol 2022; 39:6503504. [PMID: 35021222 PMCID: PMC8890502 DOI: 10.1093/molbev/msac007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/04/2022] Open
Abstract
Next-generation sequencing has resulted in an explosion of available data, much of which remains unstudied in terms of biochemical function; yet, experimental characterization of these sequences has the potential to provide unprecedented insight into the evolution of enzyme activity. One way to make inroads into the experimental study of the voluminous data available is to engage students by integrating teaching and research in a college classroom such that eventually hundreds or thousands of enzymes may be characterized. In this study, we capitalize on this potential to focus on SABATH methyltransferase enzymes that have been shown to methylate the important plant hormone, salicylic acid (SA), to form methyl salicylate. We analyze data from 76 enzymes of flowering plant species in 23 orders and 41 families to investigate how widely conserved substrate preference is for SA methyltransferase orthologs. We find a high degree of conservation of substrate preference for SA over the structurally similar metabolite, benzoic acid, with recent switches that appear to be associated with gene duplication and at least three cases of functional compensation by paralogous enzymes. The presence of Met in active site position 150 is a useful predictor of SA methylation preference in SABATH methyltransferases but enzymes with other residues in the homologous position show the same substrate preference. Although our dense and systematic sampling of SABATH enzymes across angiosperms has revealed novel insights, this is merely the “tip of the iceberg” since thousands of sequences remain uncharacterized in this enzyme family alone.
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Affiliation(s)
- Nicole M Dubs
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Breck R Davis
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Victor de Brito
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Kate C Colebrook
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Ian J Tiefel
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Madison B Nakayama
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Ruiqi Huang
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Audrey E Ledvina
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Samantha J Hack
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Brent Inkelaar
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Talline R Martins
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Sarah M Aartila
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Kelli S Albritton
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Sarah Almuhanna
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Ryan J Arnoldi
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Clara K Austin
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Amber C Battle
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Gregory R Begeman
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Caitlin M Bickings
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Jonathon T Bradfield
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Eric C Branch
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Eric P Conti
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Breana Cooley
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Nicole M Dotson
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Cheyone J Evans
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Amber S Fries
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Ivan G Gilbert
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Weston D Hillier
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Pornkamol Huang
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Kaitlin W Hyde
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Filip Jevtovic
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Mark C Johnson
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Julie L Keeler
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Albert Lam
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Kyle M Leach
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Jeremy D Livsey
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Jonathan T Lo
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Kevin R Loney
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Nich W Martin
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Amber S Mazahem
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Aurora N Mokris
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Destiny M Nichols
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Ruchi Ojha
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Nnanna N Okorafor
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Joshua R Paris
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | | | | | - Mathew R Seitz
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Nathan R Seymour
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Lila K Slaski
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Stephen O Stemaly
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Benjamin R Ulrich
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Emile N Van Meter
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Meghan L Young
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Todd J Barkman
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
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Liu L, Wang D, Zhang C, Liu H, Guo H, Cheng H, Liu E, Su X. The heat shock factor GhHSFA4a positively regulates cotton resistance to Verticillium dahliae. FRONTIERS IN PLANT SCIENCE 2022; 13:1050216. [PMID: 36407619 PMCID: PMC9669655 DOI: 10.3389/fpls.2022.1050216] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Accepted: 10/19/2022] [Indexed: 05/16/2023]
Abstract
Heat shock factors (HSFs) play a crucial role in the environmental stress responses of numerous plant species, including defense responses to pathogens; however, their role in cotton resistance to Verticillium dahliae remains unclear. We have previously identified several differentially expressed genes (DEGs) in Arabidopsis thaliana after inoculation with V. dahliae. Here, we discovered that GhHSFA4a in Gossypium hirsutum (cotton) after inoculation with V. dahliae shares a high identity with a DEG in A. thaliana in response to V. dahliae infection. Quantitative real-time PCR (qRT-PCR) analysis indicated that GhHSFA4a expression was rapidly induced by V. dahliae and ubiquitous in cotton roots, stems, and leaves. In a localization analysis using transient expression, GhHSFA4a was shown to be localized to the nucleus. Virus-induced gene silencing (VIGS) revealed that downregulation of GhHSFA4a significantly increased cotton susceptibility to V. dahliae. To investigate GhHSFA4a-mediated defense, 814 DEGs were identified between GhHSFA4a-silenced plants and controls using comparative RNA-seq analysis. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis showed that DEGs were enriched in "flavonoid biosynthesis", "sesquiterpenoid and triterpenoid biosynthesis", "linoleic acid metabolism" and "alpha-linolenic acid metabolism". The expression levels of marker genes for these four pathways were triggered after inoculation with V. dahliae. Moreover, GhHSFA4a-overexpressing lines of A. thaliana displayed enhanced resistance against V. dahliae compared to that of the wild type. These results indicate that GhHSFA4a is involved in the synthesis of secondary metabolites and signal transduction, which are indispensable for innate immunity against V. dahliae in cotton.
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Affiliation(s)
- Lu Liu
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Di Wang
- Center for Advanced Measurement Science, National Institute of Metrology, Beijing, China
| | - Chao Zhang
- State Key Laboratory of North China Crop Improvement and Regulation, College of Life Science, Hebei Agricultural University, Baoding, China
| | - Haiyang Liu
- Institute of Plant Protection, Xinjiang Academy of Agricultural Sciences, Urumqi, China
| | - Huiming Guo
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- Hainan Yazhou Bay Seed Lab, Sanya, China
| | - Hongmei Cheng
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- Hainan Yazhou Bay Seed Lab, Sanya, China
| | - Enliang Liu
- Institute of Grain Crops, Xinjiang Academy of Agricultural ScienceS, Urumqi, China
- *Correspondence: Xiaofeng Su, ; Enliang Liu,
| | - Xiaofeng Su
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- Hainan Yazhou Bay Seed Lab, Sanya, China
- *Correspondence: Xiaofeng Su, ; Enliang Liu,
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Transcriptomic Analysis of Sex-Associated DEGs in Female and Male Flowers of Kiwifruit (Actinidia deliciosa [A. Chev] C. F. Liang & A. R. Ferguson). HORTICULTURAE 2021. [DOI: 10.3390/horticulturae8010038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Kiwifruit (Actinidia deliciosa [A. Chev.], C.V. Liang & A. R. Ferguson, 1984) is a perennial plant, with morphologically hermaphroditic and functionally dioecious flowers. Fruits of this species are berries of great commercial and nutritional importance. Nevertheless, few studies have analyzed the molecular mechanisms involved in sexual differentiation in this species. To determine these mechanisms, we performed RNA-seq in floral tissue at stage 60 on the BBCH scale in cultivar ‘Hayward’ (H, female) and a seedling from ‘Green Light’ × ‘Tomuri’ (G × T, male). From these analyses, we obtained expression profiles of 24,888 (H) and 27,027 (G × T) genes, of which 6413 showed differential transcript abundance. Genetic ontology (GO) and KEGG analysis revealed activation of pathways associated with the translation of hormonal signals, plant-pathogen interaction, metabolism of hormones, sugars, and nucleotides. The analysis of the protein-protein interaction network showed that the genes ERL1, AG, AGL8, LFY, WUS, AP2, WRKY, and CO, are crucial elements in the regulation of the hormonal response for the formation and development of anatomical reproductive structures and gametophytes. On the other hand, genes encoding four Putative S-adenosyl-L-methionine-dependent methyltransferases (Achn201401, Achn281971, Achn047771 and Achn231981) were identified, which were up-regulated mainly in the male flowers. Moreover, the expression profiles of 15 selected genes through RT-qPCR were consistent with the results of RNA-seq. Finally, this work provides gene expression-based interactions between transcription factors and effector genes from hormonal signaling pathways, development of floral organs, biological and metabolic processes or even epigenetic mechanisms which could be involved in the kiwi sex-determination. Thus, in order to decode the nature of these interactions, it could be helpful to propose new models of flower development and sex determination in the Actinidia genus.
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