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Hansel C. Contiguity in perception: origins in cellular associative computations. Trends Neurosci 2024; 47:170-180. [PMID: 38310022 PMCID: PMC10939850 DOI: 10.1016/j.tins.2024.01.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 11/30/2023] [Accepted: 01/05/2024] [Indexed: 02/05/2024]
Abstract
Our brains are good at detecting and learning associative structures; according to some linguistic theories, this capacity even constitutes a prerequisite for the development of syntax and compositionality in language and verbalized thought. I will argue that the search for associative motifs in input patterns is an evolutionary old brain function that enables contiguity in sensory perception and orientation in time and space. It has its origins in an elementary material property of cells that is particularly evident at chemical synapses: input-assigned calcium influx that activates calcium sensor proteins involved in memory storage. This machinery for the detection and learning of associative motifs generates knowledge about input relationships and integrates this knowledge into existing networks through updates in connectivity patterns.
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Affiliation(s)
- Christian Hansel
- Department of Neurobiology, University of Chicago, Chicago, IL 60637, USA.
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2
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Jeon I, Kim T. Distinctive properties of biological neural networks and recent advances in bottom-up approaches toward a better biologically plausible neural network. Front Comput Neurosci 2023; 17:1092185. [PMID: 37449083 PMCID: PMC10336230 DOI: 10.3389/fncom.2023.1092185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Accepted: 06/12/2023] [Indexed: 07/18/2023] Open
Abstract
Although it may appear infeasible and impractical, building artificial intelligence (AI) using a bottom-up approach based on the understanding of neuroscience is straightforward. The lack of a generalized governing principle for biological neural networks (BNNs) forces us to address this problem by converting piecemeal information on the diverse features of neurons, synapses, and neural circuits into AI. In this review, we described recent attempts to build a biologically plausible neural network by following neuroscientifically similar strategies of neural network optimization or by implanting the outcome of the optimization, such as the properties of single computational units and the characteristics of the network architecture. In addition, we proposed a formalism of the relationship between the set of objectives that neural networks attempt to achieve, and neural network classes categorized by how closely their architectural features resemble those of BNN. This formalism is expected to define the potential roles of top-down and bottom-up approaches for building a biologically plausible neural network and offer a map helping the navigation of the gap between neuroscience and AI engineering.
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Affiliation(s)
| | - Taegon Kim
- Brain Science Institute, Korea Institute of Science and Technology, Seoul, Republic of Korea
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3
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Sihn D, Kwon OS, Kim SP. Robust and efficient representations of dynamic stimuli in hierarchical neural networks via temporal smoothing. Front Comput Neurosci 2023; 17:1164595. [PMID: 37398935 PMCID: PMC10307978 DOI: 10.3389/fncom.2023.1164595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Accepted: 05/24/2023] [Indexed: 07/04/2023] Open
Abstract
Introduction Efficient coding that minimizes informational redundancy of neural representations is a widely accepted neural coding principle. Despite the benefit, maximizing efficiency in neural coding can make neural representation vulnerable to random noise. One way to achieve robustness against random noise is smoothening neural responses. However, it is not clear whether the smoothness of neural responses can hold robust neural representations when dynamic stimuli are processed through a hierarchical brain structure, in which not only random noise but also systematic error due to temporal lag can be induced. Methods In the present study, we showed that smoothness via spatio-temporally efficient coding can achieve both efficiency and robustness by effectively dealing with noise and neural delay in the visual hierarchy when processing dynamic visual stimuli. Results The simulation results demonstrated that a hierarchical neural network whose bidirectional synaptic connections were learned through spatio-temporally efficient coding with natural scenes could elicit neural responses to visual moving bars similar to those to static bars with the identical position and orientation, indicating robust neural responses against erroneous neural information. It implies that spatio-temporally efficient coding preserves the structure of visual environments locally in the neural responses of hierarchical structures. Discussion The present results suggest the importance of a balance between efficiency and robustness in neural coding for visual processing of dynamic stimuli across hierarchical brain structures.
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Sihn D, Kim SP. Spatio-Temporally Efficient Coding Assigns Functions to Hierarchical Structures of the Visual System. Front Comput Neurosci 2022; 16:890447. [PMID: 35694611 PMCID: PMC9184804 DOI: 10.3389/fncom.2022.890447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Accepted: 05/09/2022] [Indexed: 11/17/2022] Open
Abstract
Hierarchical structures constitute a wide array of brain areas, including the visual system. One of the important questions regarding visual hierarchical structures is to identify computational principles for assigning functions that represent the external world to hierarchical structures of the visual system. Given that visual hierarchical structures contain both bottom-up and top-down pathways, the derived principles should encompass these bidirectional pathways. However, existing principles such as predictive coding do not provide an effective principle for bidirectional pathways. Therefore, we propose a novel computational principle for visual hierarchical structures as spatio-temporally efficient coding underscored by the efficient use of given resources in both neural activity space and processing time. This coding principle optimises bidirectional information transmissions over hierarchical structures by simultaneously minimising temporal differences in neural responses and maximising entropy in neural representations. Simulations demonstrated that the proposed spatio-temporally efficient coding was able to assign the function of appropriate neural representations of natural visual scenes to visual hierarchical structures. Furthermore, spatio-temporally efficient coding was able to predict well-known phenomena, including deviations in neural responses to unlearned inputs and bias in preferred orientations. Our proposed spatio-temporally efficient coding may facilitate deeper mechanistic understanding of the computational processes of hierarchical brain structures.
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Affiliation(s)
| | - Sung-Phil Kim
- Department of Biomedical Engineering, Ulsan National Institute of Science and Technology, Ulsan, South Korea
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Predictive encoding of motion begins in the primate retina. Nat Neurosci 2021; 24:1280-1291. [PMID: 34341586 PMCID: PMC8728393 DOI: 10.1038/s41593-021-00899-1] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Accepted: 06/25/2021] [Indexed: 02/06/2023]
Abstract
Predictive motion encoding is an important aspect of visually guided behavior that allows animals to estimate the trajectory of moving objects. Motion prediction is understood primarily in the context of translational motion, but the environment contains other types of behaviorally salient motion correlation such as those produced by approaching or receding objects. However, the neural mechanisms that detect and predictively encode these correlations remain unclear. We report here that four of the parallel output pathways in the primate retina encode predictive motion information, and this encoding occurs for several classes of spatiotemporal correlation that are found in natural vision. Such predictive coding can be explained by known nonlinear circuit mechanisms that produce a nearly optimal encoding, with transmitted information approaching the theoretical limit imposed by the stimulus itself. Thus, these neural circuit mechanisms efficiently separate predictive information from nonpredictive information during the encoding process.
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Maximally efficient prediction in the early fly visual system may support evasive flight maneuvers. PLoS Comput Biol 2021; 17:e1008965. [PMID: 34014926 PMCID: PMC8136689 DOI: 10.1371/journal.pcbi.1008965] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Accepted: 04/13/2021] [Indexed: 11/20/2022] Open
Abstract
The visual system must make predictions to compensate for inherent delays in its processing. Yet little is known, mechanistically, about how prediction aids natural behaviors. Here, we show that despite a 20-30ms intrinsic processing delay, the vertical motion sensitive (VS) network of the blowfly achieves maximally efficient prediction. This prediction enables the fly to fine-tune its complex, yet brief, evasive flight maneuvers according to its initial ego-rotation at the time of detection of the visual threat. Combining a rich database of behavioral recordings with detailed compartmental modeling of the VS network, we further show that the VS network has axonal gap junctions that are critical for optimal prediction. During evasive maneuvers, a VS subpopulation that directly innervates the neck motor center can convey predictive information about the fly’s future ego-rotation, potentially crucial for ongoing flight control. These results suggest a novel sensory-motor pathway that links sensory prediction to behavior. Survival-critical behaviors shape neural circuits to translate sensory information into strikingly fast predictions, e.g. in escaping from a predator faster than the system’s processing delay. We show that the fly visual system implements fast and accurate prediction of its visual experience. This provides crucial information for directing fast evasive maneuvers that unfold over just 40ms. Our work shows how this fast prediction is implemented, mechanistically, and suggests the existence of a novel sensory-motor pathway from the fly visual system to a wing steering motor neuron. Echoing and amplifying previous work in the retina, our work hypothesizes that the efficient encoding of predictive information is a universal design principle supporting fast, natural behaviors.
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Sachdeva V, Mora T, Walczak AM, Palmer SE. Optimal prediction with resource constraints using the information bottleneck. PLoS Comput Biol 2021; 17:e1008743. [PMID: 33684112 PMCID: PMC7971903 DOI: 10.1371/journal.pcbi.1008743] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Revised: 03/18/2021] [Accepted: 01/27/2021] [Indexed: 11/19/2022] Open
Abstract
Responding to stimuli requires that organisms encode information about the external world. Not all parts of the input are important for behavior, and resource limitations demand that signals be compressed. Prediction of the future input is widely beneficial in many biological systems. We compute the trade-offs between representing the past faithfully and predicting the future using the information bottleneck approach, for input dynamics with different levels of complexity. For motion prediction, we show that, depending on the parameters in the input dynamics, velocity or position information is more useful for accurate prediction. We show which motion representations are easiest to re-use for accurate prediction in other motion contexts, and identify and quantify those with the highest transferability. For non-Markovian dynamics, we explore the role of long-term memory in shaping the internal representation. Lastly, we show that prediction in evolutionary population dynamics is linked to clustering allele frequencies into non-overlapping memories.
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Affiliation(s)
- Vedant Sachdeva
- Graduate Program in Biophysical Sciences, University of Chicago, Chicago, Illinois, United States of America
| | - Thierry Mora
- Laboratoire de physique de l’École normale supérieure, Centre National de la Recherche Scientifique, Paris, France
- Paris Sciences et Lettres University Paris, Paris, France
- Sorbonne Université Paris, Paris, France
- Université de Paris, Paris, France
| | - Aleksandra M. Walczak
- Laboratoire de physique de l’École normale supérieure, Centre National de la Recherche Scientifique, Paris, France
- Paris Sciences et Lettres University Paris, Paris, France
- Sorbonne Université Paris, Paris, France
- Université de Paris, Paris, France
| | - Stephanie E. Palmer
- Department of Organismal Biology and Anatomy, University of Chicago, Chicago, Illinois, United States of America
- Department of Physics, University of Chicago, Chicago, Illinois, United States of America
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Souihel S, Cessac B. On the potential role of lateral connectivity in retinal anticipation. JOURNAL OF MATHEMATICAL NEUROSCIENCE 2021; 11:3. [PMID: 33420903 PMCID: PMC7796858 DOI: 10.1186/s13408-020-00101-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Accepted: 12/15/2020] [Indexed: 06/12/2023]
Abstract
We analyse the potential effects of lateral connectivity (amacrine cells and gap junctions) on motion anticipation in the retina. Our main result is that lateral connectivity can-under conditions analysed in the paper-trigger a wave of activity enhancing the anticipation mechanism provided by local gain control (Berry et al. in Nature 398(6725):334-338, 1999; Chen et al. in J. Neurosci. 33(1):120-132, 2013). We illustrate these predictions by two examples studied in the experimental literature: differential motion sensitive cells (Baccus and Meister in Neuron 36(5):909-919, 2002) and direction sensitive cells where direction sensitivity is inherited from asymmetry in gap junctions connectivity (Trenholm et al. in Nat. Neurosci. 16:154-156, 2013). We finally present reconstructions of retinal responses to 2D visual inputs to assess the ability of our model to anticipate motion in the case of three different 2D stimuli.
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Affiliation(s)
- Selma Souihel
- Biovision Team and Neuromod Institute, Inria, Université Côte d'Azur, Nice, France.
| | - Bruno Cessac
- Biovision Team and Neuromod Institute, Inria, Université Côte d'Azur, Nice, France
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Candadai M, Izquierdo EJ. Sources of predictive information in dynamical neural networks. Sci Rep 2020; 10:16901. [PMID: 33037274 PMCID: PMC7547683 DOI: 10.1038/s41598-020-73380-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2020] [Accepted: 09/07/2020] [Indexed: 11/28/2022] Open
Abstract
Behavior involves the ongoing interaction between an organism and its environment. One of the prevailing theories of adaptive behavior is that organisms are constantly making predictions about their future environmental stimuli. However, how they acquire that predictive information is still poorly understood. Two complementary mechanisms have been proposed: predictions are generated from an agent's internal model of the world or predictions are extracted directly from the environmental stimulus. In this work, we demonstrate that predictive information, measured using bivariate mutual information, cannot distinguish between these two kinds of systems. Furthermore, we show that predictive information cannot distinguish between organisms that are adapted to their environments and random dynamical systems exposed to the same environment. To understand the role of predictive information in adaptive behavior, we need to be able to identify where it is generated. To do this, we decompose information transfer across the different components of the organism-environment system and track the flow of information in the system over time. To validate the proposed framework, we examined it on a set of computational models of idealized agent-environment systems. Analysis of the systems revealed three key insights. First, predictive information, when sourced from the environment, can be reflected in any agent irrespective of its ability to perform a task. Second, predictive information, when sourced from the nervous system, requires special dynamics acquired during the process of adapting to the environment. Third, the magnitude of predictive information in a system can be different for the same task if the environmental structure changes.
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Affiliation(s)
- Madhavun Candadai
- Cognitive Science program, Indiana University, Bloomington, IN, USA
- The Luddy School of Informatics, Computing, and Engineering, Indiana University, Bloomington, IN, USA
| | - Eduardo J Izquierdo
- Cognitive Science program, Indiana University, Bloomington, IN, USA.
- The Luddy School of Informatics, Computing, and Engineering, Indiana University, Bloomington, IN, USA.
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Chang AYC, Biehl M, Yu Y, Kanai R. Information Closure Theory of Consciousness. Front Psychol 2020; 11:1504. [PMID: 32760320 PMCID: PMC7374725 DOI: 10.3389/fpsyg.2020.01504] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2019] [Accepted: 06/05/2020] [Indexed: 11/13/2022] Open
Abstract
Information processing in neural systems can be described and analyzed at multiple spatiotemporal scales. Generally, information at lower levels is more fine-grained but can be coarse-grained at higher levels. However, only information processed at specific scales of coarse-graining appears to be available for conscious awareness. We do not have direct experience of information available at the scale of individual neurons, which is noisy and highly stochastic. Neither do we have experience of more macro-scale interactions, such as interpersonal communications. Neurophysiological evidence suggests that conscious experiences co-vary with information encoded in coarse-grained neural states such as the firing pattern of a population of neurons. In this article, we introduce a new informational theory of consciousness: Information Closure Theory of Consciousness (ICT). We hypothesize that conscious processes are processes which form non-trivial informational closure (NTIC) with respect to the environment at certain coarse-grained scales. This hypothesis implies that conscious experience is confined due to informational closure from conscious processing to other coarse-grained scales. Information Closure Theory of Consciousness (ICT) proposes new quantitative definitions of both conscious content and conscious level. With the parsimonious definitions and a hypothesize, ICT provides explanations and predictions of various phenomena associated with consciousness. The implications of ICT naturally reconcile issues in many existing theories of consciousness and provides explanations for many of our intuitions about consciousness. Most importantly, ICT demonstrates that information can be the common language between consciousness and physical reality.
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Vilimelis Aceituno P, Ehsani M, Jost J. Spiking time-dependent plasticity leads to efficient coding of predictions. BIOLOGICAL CYBERNETICS 2020; 114:43-61. [PMID: 31873797 PMCID: PMC7062862 DOI: 10.1007/s00422-019-00813-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2019] [Accepted: 12/13/2019] [Indexed: 06/10/2023]
Abstract
Latency reduction in postsynaptic spikes is a well-known effect of spiking time-dependent plasticity. We expand this notion for long postsynaptic spike trains on single neurons, showing that, for a fixed input spike train, STDP reduces the number of postsynaptic spikes and concentrates the remaining ones. Then, we study the consequences of this phenomena in terms of coding, finding that this mechanism improves the neural code by increasing the signal-to-noise ratio and lowering the metabolic costs of frequent stimuli. Finally, we illustrate that the reduction in postsynaptic latencies can lead to the emergence of predictions.
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Affiliation(s)
- Pau Vilimelis Aceituno
- Max Planck Institute for Mathematics in the Sciences, Inselstraße 22, 04103, Leipzig, Germany.
- Max Planck School of Cognition, Stephanstraße 1a, 04103, Leipzig, Germany.
| | - Masud Ehsani
- Max Planck Institute for Mathematics in the Sciences, Inselstraße 22, 04103, Leipzig, Germany
| | - Jürgen Jost
- Max Planck Institute for Mathematics in the Sciences, Inselstraße 22, 04103, Leipzig, Germany
- Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM, 87501, USA
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Turner MH, Sanchez Giraldo LG, Schwartz O, Rieke F. Stimulus- and goal-oriented frameworks for understanding natural vision. Nat Neurosci 2019; 22:15-24. [PMID: 30531846 PMCID: PMC8378293 DOI: 10.1038/s41593-018-0284-0] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2018] [Accepted: 10/22/2018] [Indexed: 12/21/2022]
Abstract
Our knowledge of sensory processing has advanced dramatically in the last few decades, but this understanding remains far from complete, especially for stimuli with the large dynamic range and strong temporal and spatial correlations characteristic of natural visual inputs. Here we describe some of the issues that make understanding the encoding of natural images a challenge. We highlight two broad strategies for approaching this problem: a stimulus-oriented framework and a goal-oriented one. Different contexts can call for one framework or the other. Looking forward, recent advances, particularly those based in machine learning, show promise in borrowing key strengths of both frameworks and by doing so illuminating a path to a more comprehensive understanding of the encoding of natural stimuli.
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Affiliation(s)
- Maxwell H Turner
- Department of Physiology and Biophysics, University of Washington, Seattle, WA, USA
- Graduate Program in Neuroscience, University of Washington, Seattle, WA, USA
| | | | - Odelia Schwartz
- Department of Computer Science, University of Miami, Coral Gables, FL, USA
| | - Fred Rieke
- Department of Physiology and Biophysics, University of Washington, Seattle, WA, USA.
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Beyond STDP-towards diverse and functionally relevant plasticity rules. Curr Opin Neurobiol 2018; 54:12-19. [PMID: 30056261 DOI: 10.1016/j.conb.2018.06.011] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2018] [Revised: 06/06/2018] [Accepted: 06/18/2018] [Indexed: 01/08/2023]
Abstract
Synaptic plasticity, induced by the close temporal association of two neural signals, supports associative forms of learning. However, the millisecond timescales for association often do not match the much longer delays for behaviorally relevant signals that supervise learning. In particular, information about the behavioral outcome of neural activity can be delayed, leading to a problem of temporal credit assignment. Recent studies suggest that synaptic plasticity can have temporal rules that not only accommodate the delays relevant to the circuit, but also be precisely tuned to the behavior the circuit supports. These discoveries highlight the diversity of plasticity rules, whose temporal requirements may depend on circuit delays and the contingencies of behavior.
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