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Kongsilp P, Taetragool U, Duangphakdee O. Transfer learning-based approach to individual Apis cerana segmentation. PLoS One 2025; 20:e0319968. [PMID: 40238729 PMCID: PMC12002474 DOI: 10.1371/journal.pone.0319968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2024] [Accepted: 02/11/2025] [Indexed: 04/18/2025] Open
Abstract
Honey bees play a crucial role in natural ecosystems, mainly through their pollination services. Within a hive, they exhibit intricate social behaviors and communicate among thousands of individuals. Accurate detection and segmentation of honey bees are crucial for automated behavior analysis, as they significantly enhance object tracking and behavior recognition by yielding high-quality results. This study is specifically centered on the detection and segmentation of individual bees, particularly Apis cerana, within a hive environment, employing the Mask R-CNN deep learning model. We used transfer learning weights from our previously trained Apis mellifera model and explored data preprocessing techniques, such as brightness and contrast enhancement, to enhance model performance. Our proposed approach offers an optimal solution with a minimal dataset size and computational time while maintaining high model performance. Mean average precision (mAP) served as the evaluation metric for both detection and segmentation tasks. Our solution for A. cerana segmentation achieves the highest performance with a mAP of 0.728. Moreover, the number of training and validation sets was reduced by 85% compared to our previous study on the A. mellifera segmentation model.
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Affiliation(s)
- Panadda Kongsilp
- Department of Computer Engineering, King Mongkut’s University of Technology Thonburi, Bangkok, Thailand
| | - Unchalisa Taetragool
- Department of Computer Engineering, King Mongkut’s University of Technology Thonburi, Bangkok, Thailand
| | - Orawan Duangphakdee
- Native Honeybee and Pollinator Research Center, Ratchaburi Campus, King Mongkut’s University of Technology Thonburi, Rang Bua, Chom Bueng, Ratchaburi, Thailand
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Bender de Souza IL, Macarini LC, de Oliveira CMR, Ferreira NGC, Guimarães ATB. Effects of anthropogenic stress on stingless bees Melipona mandacaia inhabiting urban and natural environments. ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY 2025; 114:104658. [PMID: 39970996 DOI: 10.1016/j.etap.2025.104658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2025] [Revised: 02/10/2025] [Accepted: 02/15/2025] [Indexed: 02/21/2025]
Abstract
Bees play a crucial role as pollinators, significantly contributing to ecosystem health. However, they face growing threats from human activities. This study uses biomarkers to evaluate the health status of Melipona mandacaia, a stingless bee native to the Caatinga biome, as indicators of anthropogenic stress. Bees were collected from the unique Caatinga biome, which had no recorded human pressure, and from an urban area with high human pressure. These bees were then analyzed for various biomarkers to assess the different levels of anthropogenic stress. The biomarkers included cholinesterases (ChE) to assess neurotoxicity, catalase (CAT) to measure antioxidant responses, glutathione S-transferases (GST) for detoxification pathways, and lipid peroxidation (LPO) as an indicator of oxidative stress. The results reveal that ChE inhibition may be associated with stress levels due to human activities showing an inhibition pattern with increased stress levels (up to 54.4 % inhibition), while the remaining biomarkers showed mixed responses across the different stress-level areas. In addition, the use of a principal component analysis (PCA) allowed a separation between the different groups and the weigh of the measured variables to each anthropogenic stress group. The integrated biomarker response (IBR) index was applied showing a clear distinction among groups. The obtained results could be partly explained by the beekeeping practices in some locations, which may have mitigated the effects of anthropogenic stressors to a certain degree, especially in HS. These findings underscore the importance of monitoring wild bee health in the Caatinga and demonstrate the value of a multifaceted biomarker approach for understanding the impacts of anthropogenic stressors on bee populations in varied environments and the effects of beekeeping.
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Affiliation(s)
- Isabelle Letícia Bender de Souza
- Ecotoxicology and Landscape Research Group, Rua Universitária n. 2069, Cascavel, PR, Brazil; Graduate Program in Biosciences and Health - Universidade Estadual do Oeste do Paraná (UNIOESTE), Rua Universitária n. 2069, Cascavel, PR, Brazil
| | - Leanna Camila Macarini
- Ecotoxicology and Landscape Research Group, Rua Universitária n. 2069, Cascavel, PR, Brazil
| | - Cíntia Mara Ribas de Oliveira
- Graduate Program in Environmental Management (PPGAmb), Universidade Positivo (UP) and Centro de Pesquisa da Universidade Positivo (CPUP), Professor Pedro Viriato Parigot de Souza, n. 5300, Curitiba, PR 81280-330, Brazil
| | - Nuno G C Ferreira
- CIIMAR - Centro Interdisciplinar de Investigação Marinha e Ambiental, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos S/N, Matosinhos 4450-208, Portugal; School of Biosciences - Cardiff University, Museum Avenue, Cardiff, Wales CF10 3AX, UK.
| | - Ana Tereza Bittencourt Guimarães
- Ecotoxicology and Landscape Research Group, Rua Universitária n. 2069, Cascavel, PR, Brazil; Graduate Program in Biosciences and Health - Universidade Estadual do Oeste do Paraná (UNIOESTE), Rua Universitária n. 2069, Cascavel, PR, Brazil
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Staps M, Tarnita CE, Kawakatsu M. Ecological principles for the evolution of communication in collective systems. Proc Biol Sci 2024; 291:20241562. [PMID: 39381908 PMCID: PMC11462452 DOI: 10.1098/rspb.2024.1562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 07/29/2024] [Accepted: 07/29/2024] [Indexed: 10/10/2024] Open
Abstract
Communication allows members of a collective to share information about their environment. Advanced collective systems, such as multicellular organisms and social insect colonies, vary in whether they use communication at all and, if they do, in what types of signals they use, but the origins of these differences are poorly understood. Here, we develop a theoretical framework to investigate the evolution and diversity of communication strategies under collective-level selection. We find that whether communication can evolve depends on a collective's external environment: communication only evolves in sufficiently stable environments, where the costs of sensing are high enough to disfavour independent sensing but not so high that the optimal strategy is to ignore the environment altogether. Moreover, we find that the evolution of diverse signalling strategies-including those relying on prolonged signalling (e.g. honeybee waggle dance), persistence of signals in the environment (e.g. ant trail pheromones) and brief but frequent communicative interactions (e.g. ant antennal contacts)-can be explained theoretically in terms of the interplay between the demands of the environment and internal constraints on the signal. Altogether, we provide a general framework for comparing communication strategies found in nature and uncover simple ecological principles that may contribute to their diversity.
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Affiliation(s)
- Merlijn Staps
- Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ08544, USA
| | - Corina E. Tarnita
- Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ08544, USA
| | - Mari Kawakatsu
- Department of Biology, University of Pennsylvania, Philadelphia, PA19104, USA
- Center for Mathematical Biology, University of Pennsylvania, Philadelphia, PA19104, USA
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Bousquet CAH, Sueur C, King AJ, O'Bryan LR. Individual and ecological heterogeneity promote complex communication in social vertebrate group decisions. Philos Trans R Soc Lond B Biol Sci 2024; 379:20230204. [PMID: 38768211 PMCID: PMC11391315 DOI: 10.1098/rstb.2023.0204] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 12/08/2023] [Accepted: 03/04/2024] [Indexed: 05/22/2024] Open
Abstract
To receive the benefits of social living, individuals must make effective group decisions that enable them to achieve behavioural coordination and maintain cohesion. However, heterogeneity in the physical and social environments surrounding group decision-making contexts can increase the level of difficulty social organisms face in making decisions. Groups that live in variable physical environments (high ecological heterogeneity) can experience barriers to information transfer and increased levels of ecological uncertainty. In addition, in groups with large phenotypic variation (high individual heterogeneity), individuals can have substantial conflicts of interest regarding the timing and nature of activities, making it difficult for them to coordinate their behaviours or reach a consensus. In such cases, active communication can increase individuals' abilities to achieve coordination, such as by facilitating the transfer and aggregation of information about the environment or individual behavioural preferences. Here, we review the role of communication in vertebrate group decision-making and its relationship to heterogeneity in the ecological and social environment surrounding group decision-making contexts. We propose that complex communication has evolved to facilitate decision-making in specific socio-ecological contexts, and we provide a framework for studying this topic and testing related hypotheses as part of future research in this area. This article is part of the theme issue 'The power of sound: unravelling how acoustic communication shapes group dynamics'.
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Affiliation(s)
- Christophe A. H. Bousquet
- Department of Psychology, University of Konstanz, Konstanz78457, Germany
- Centre for the Advanced Study of Collective Behaviour, University of Konstanz, Konstanz78457, Germany
| | - Cédric Sueur
- Institut pluridisciplinaire Hubert Curien, Strasbourg67000, France
- Institut Universitaire de France, Paris75005, France
| | - Andrew J. King
- Biosciences, Faculty of Science and Engineering, SwanseaSA2 8PP, UK
| | - Lisa R. O'Bryan
- Department of Psychological Sciences, Rice University, Houston, TX77005, USA
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A. K. BK, George EA, Brockmann A. Tropical and montane Apis cerana show distinct dance-distance calibration curves. J Exp Biol 2024; 227:jeb247510. [PMID: 38853597 PMCID: PMC11418176 DOI: 10.1242/jeb.247510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Accepted: 05/31/2024] [Indexed: 06/11/2024]
Abstract
Social bees have evolved sophisticated communication systems to recruit nestmates to newly found food sources. As foraging ranges can vary from a few hundred meters to several kilometers depending on the environment or season, populations of social bee species living in different climate zones likely show specific adaptations in their recruitment communication. Accordingly, studies in the western honey bee, Apis mellifera, demonstrated that temperate populations exhibit shallower dance-calibration curves compared with tropical populations. Here, we report the first comparison of calibration curves for three Indian Apis cerana lineages: the tropical Apis indica, and the two montane Himalayan populations Apis cerana cerana (Himachal Pradesh) and Apis cerana kashmirensis (Jammu and Kashmir). We found that the colonies of the two montane A. cerana populations show dance-distance calibration curves with significantly shallower slopes than those of the tropical A. indica. Next, we transferred A. c. cerana colonies to Bangalore (∼ 2600 km away) to obtain calibration curves in the same location as A. indica. The common garden experiment confirmed this difference in slopes, implying that the lineages exhibit genetically fixed differences in dance-distance coding. However, the slopes of the calibration curves of the transferred A. c. cerana colonies were also significantly higher than those of the colonies tested in their original habitat, indicating an important effect of the environment. The differences in dance-distance coding between temperate and tropical A. cerana lineages resemble those described for Apis mellifera, suggesting that populations of both species independently evolved similar adaptations.
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Affiliation(s)
- Bharath Kumar A. K.
- National Centre for Biological Sciences - Tata Institute of Fundamental Research, Bengaluru 560065, India
- Department of Apiculture, University of Agricultural Sciences - GKVK, Bengaluru 560065, India
| | - Ebi Antony George
- Department of Ecology and Evolution, Biophore, University of Lausanne, 1015 Lausanne, Switzerland
| | - Axel Brockmann
- National Centre for Biological Sciences - Tata Institute of Fundamental Research, Bengaluru 560065, India
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Grüter C, Segers FHID, Hayes L. Extensive loss of forage diversity in social bees owing to flower constancy in simulated environments. Proc Biol Sci 2024; 291:20241036. [PMID: 39082242 PMCID: PMC11289734 DOI: 10.1098/rspb.2024.1036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 05/30/2024] [Accepted: 05/30/2024] [Indexed: 08/02/2024] Open
Abstract
Many bees visit just one flower species during a foraging trip, i.e. they show flower constancy. Flower constancy is important for plant reproduction but it could lead to an unbalanced diet, especially in biodiversity-depleted landscapes. It is assumed that flower constancy does not reduce dietary diversity in social bees, such as honeybees or bumblebees, but this has not yet been tested. We used computer simulations to investigate the effects of flower constancy on colony diet in plant species-rich and species-poor landscapes. We also explored if communication about food sources, which is used by many social bees, further reduces forage diversity. Our simulations reveal an extensive loss of forage diversity owing to flower constancy in both species-rich and species-poor environments. Small flower-constant colonies often discovered only 30-50% of all available plant species, thereby increasing the risk of nutritional deficiencies. Communication often interacted with flower constancy to reduce forage diversity further. Finally, we found that food source clustering, but not habitat fragmentation impaired dietary diversity. These findings highlight the nutritional challenges flower-constant bees face in different landscapes and they can aid in the design of measures to increase forage diversity and improve bee nutrition in human-modified landscapes.
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Affiliation(s)
- Christoph Grüter
- School of Biological Sciences, University of Bristol, 24 Tyndall Avenue, BristolBS8 1TQ, UK
| | | | - Lucy Hayes
- School of Biological Sciences, University of Bristol, 24 Tyndall Avenue, BristolBS8 1TQ, UK
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Shakeel M, Brockmann A. Temporal effects of sugar intake on fly local search and honey bee dance behaviour. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2024; 210:415-429. [PMID: 37624392 DOI: 10.1007/s00359-023-01670-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2023] [Revised: 07/31/2023] [Accepted: 08/16/2023] [Indexed: 08/26/2023]
Abstract
Honey bees communicate flight navigational information of profitable food to nestmates via their dance, a small-scale walking pattern, inside the nest. Hungry flies and honey bee foragers exhibit a sugar-elicited search involving path integration that bears a resemblance to dance behaviour. This study aimed to investigate the temporal dynamics of the initiation of sugar-elicited search and dance behaviour, using a comparative approach. Passive displacement experiments showed that feeding and the initiation of search could be spatially and temporally dissociated. Sugar intake increased the probability of initiating a search but the actual onset of walking triggers the path integration system to guide the search. When prevented from walking after feeding, flies and bees maintained their motivation for a path integration-based search for a duration of 3 min. In flies, turning and associated characters were significantly reduced during this period but remained higher than in flies without sugar stimulus. These results suggest that sugar elicits two independent behavioural responses: path integration and increased turning, with the initiation and duration of path integration system being temporally restricted. Honey bee dance experiments demonstrated that the motivation of foragers to initiate dance persisted for 15 min, while the number of circuits declined after 3 min following sugar ingestion. Based on these findings, we propose that food intake during foraging increases the probability to initiate locomotor behaviours involving the path integration system in both flies and honey bees, and this ancestral connection might have been co-opted and elaborated during the evolution of dance communication by honey bees.
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Affiliation(s)
- Manal Shakeel
- National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore, 560065, India.
- University of Trans-Disciplinary Health Science and Technology, Bangalore, 560064, India.
| | - Axel Brockmann
- National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore, 560065, India
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Araujo NDS, Ogihara F, Martins PM, Arias MC. Insights from Melipona bicolor hybrid genome assembly: a stingless bee genome with chromosome-level scaffold. BMC Genomics 2024; 25:171. [PMID: 38350872 PMCID: PMC10863234 DOI: 10.1186/s12864-024-10075-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 02/01/2024] [Indexed: 02/15/2024] Open
Abstract
BACKGROUND The highly eusocial stingless bees are crucial pollinators of native and agricultural ecosystems. Nevertheless, genomic studies within this bee tribe remain scarce. We present the genome assembly of the stingless bee Melipona bicolor. This bee is a remarkable exception to the typical single-queen colony structure, since in this species, multiple queens may coexist and share reproductive duties, resulting in genetically diverse colonies with weak kinship connections. As the only known genuinely polygynous bee, M. bicolor's genome provides a valuable resource for investigating sociality beyond kin selection. RESULTS The genome was assembled employing a hybrid approach combining short and long reads, resulting in 241 contigs spanning 259 Mb (N50 of 6.2 Mb and 97.5% complete BUSCOs). Comparative analyses shed light on some evolutionary aspects of stingless bee genomics, including multiple chromosomal rearrangements in Melipona. Additionally, we explored the evolution of venom genes in M. bicolor and other stingless bees, revealing that, apart from two genes, the conserved repertoire of venom components remains under purifying selection in this clade. CONCLUSION This study advances our understanding of stingless bee genomics, contributing to the conservation efforts of these vital pollinators and offering insights into the evolutionary mechanisms driving their unique adaptations.
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Affiliation(s)
| | - Fernando Ogihara
- Laboratory of Genetics and Evolution of Bees, Bioscience Institute, Universidade de São Paulo - USP, São Paulo, Brazil
| | - Pedro Mariano Martins
- Gene Expression and Evolution Laboratory, Bioscience Institute, Universidade de São Paulo - USP, São Paulo, Brazil
| | - Maria Cristina Arias
- Laboratory of Genetics and Evolution of Bees, Bioscience Institute, Universidade de São Paulo - USP, São Paulo, Brazil
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