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Mukherjee K, Hall S, T Krummel A. H-Bonding structures of 1-ethyl-3-methylimidazolium trifluoroacetate: a vibrational spectroscopic study. Phys Chem Chem Phys 2025; 27:8488-8497. [PMID: 40195758 DOI: 10.1039/d5cp00819k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/09/2025]
Abstract
We have investigated the H-bonding structure of the ionic liquid (IL) 1-ethyl-3-methylimidazolium trifluoroacetate ([Emim:TFA]) via linear and two-dimensional infrared (2DIR) spectroscopy. We directly probed the asymmetric carbonyl stretching mode of the trifluoroacetate anion rather than using an extrinsic solute molecule as a vibrational probe, the more common approach in 2DIR studies of ILs. The CO asymmetric stretching mode exhibits multimodal character in both linear IR and 2DIR measurements, indicating structural inhomogeneity in the H-bonding of TFA. Solvent-dependent linear IR spectra of dilute Emim:TFA in two protic (D2O and MeOH-d4) and two aprotic (DMSO-d6 and acetonitrile) solvents, comparisons with NaTFA spectra in these same solvents, and DFT calculations of Emim:TFA and small, solvated ion clusters were used to characterize the H-bonding structures present in the neat ionic liquid. The most prominent IR feature near 1690 cm-1 originates from hydrogen bonding between TFA and the C2H and C4/5H imidazolium ring protons. Calculations of the two different types of H-bonding interactions, C2H (and C6H, C7H)-TFA and C4H (and/or C5H)-TFA, indicate that their frequencies are different by several wavenumbers. Higher frequency features (>1695 cm-1) are associated with those triple ion structures and higher aggregates where the TFA makes a weak hydrogen bond to Emim+. The appearance of cross-peak features in the time-zero 2DIR spectra indicates the presence of intermolecular coupling between the CO stretching modes of TFA anions, which can be expected for such pure IL systems. When diluted in polar aprotic solvents, Emim:TFA exists predominantly in ion pairs, while in polar protic solvents solvent-separated ions are the dominant species. The existence of significant ionic aggregation is only visible in the neat ionic liquid.
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Affiliation(s)
- Kallol Mukherjee
- Department of Chemistry, Colorado State University, Fort Collins, CO 80523, USA.
| | - Sarah Hall
- Department of Chemistry, Colorado State University, Fort Collins, CO 80523, USA.
| | - Amber T Krummel
- Department of Chemistry, Colorado State University, Fort Collins, CO 80523, USA.
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Long Z, Meng J, Weddle LR, Videla PE, Menzel JP, Cabral DGA, Liu J, Qiu T, Palasz JM, Bhattacharyya D, Kubiak CP, Batista VS, Lian T. The Impact of Electric Fields on Processes at Electrode Interfaces. Chem Rev 2025; 125:1604-1628. [PMID: 39818737 PMCID: PMC11826898 DOI: 10.1021/acs.chemrev.4c00487] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2024] [Revised: 12/19/2024] [Accepted: 12/24/2024] [Indexed: 01/18/2025]
Abstract
The application of external electric fields to influence chemical reactions at electrode interfaces has attracted considerable interest in recent years. However, the design of electric fields to achieve highly efficient and selective catalytic systems, akin to the optimized fields found at enzyme active sites, remains a significant challenge. Consequently, there has been substantial effort in probing and understanding the interfacial electric fields at electrode/electrolyte interfaces and their effect on adsorbates. In this review, we examine recent advances in experimental, computational, and theoretical studies of the interfacial electric field, the origin of the vibrational Stark effect of adsorbates on electrode surfaces, and the effects of electric fields on reactions at electrode/electrolyte interfaces. We also discuss recent advances in control of charge transfer and chemical reactions using magnetic fields. Finally, we outline perspectives on key areas for future studies.
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Affiliation(s)
- Zhuoran Long
- Department
of Chemistry and Energy Sciences Institute, Yale University, New Haven, Connecticut 06520, United States
| | - Jinhui Meng
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Lydia R. Weddle
- Department
of Chemistry and Biochemistry, University
of California, San Diego, 9500 Gilman Drive, MC 0358, La Jolla, California 92093, United States
| | - Pablo E. Videla
- Department
of Chemistry and Energy Sciences Institute, Yale University, New Haven, Connecticut 06520, United States
| | - Jan Paul Menzel
- Department
of Chemistry and Energy Sciences Institute, Yale University, New Haven, Connecticut 06520, United States
| | - Delmar G. A. Cabral
- Department
of Chemistry and Energy Sciences Institute, Yale University, New Haven, Connecticut 06520, United States
| | - Jinchan Liu
- Department
of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Tianyin Qiu
- Department
of Chemistry and Energy Sciences Institute, Yale University, New Haven, Connecticut 06520, United States
| | - Joseph M. Palasz
- Department
of Chemistry and Biochemistry, University
of California, San Diego, 9500 Gilman Drive, MC 0358, La Jolla, California 92093, United States
| | | | - Clifford P. Kubiak
- Department
of Chemistry and Biochemistry, University
of California, San Diego, 9500 Gilman Drive, MC 0358, La Jolla, California 92093, United States
| | - Victor S. Batista
- Department
of Chemistry and Energy Sciences Institute, Yale University, New Haven, Connecticut 06520, United States
| | - Tianquan Lian
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
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Sahu P, Islam SI, Mitra RK, Palit DK. A Complete Description of the Ultrafast Proton Transfer Dynamics in the Excited State of D-Luciferin. J Phys Chem B 2025; 129:1046-1060. [PMID: 39778914 DOI: 10.1021/acs.jpcb.4c08407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2025]
Abstract
Excited-state proton transfer (ESPT) in organic photoacids is a widely studied phenomenon in which D-luciferin is of special mention, considering the fact that apart from its phenolic OH group, the nitrogen atoms at either of the two thiazole moieties could also participate in hydrogen bonding interactions with a proton-donating solvent during ESPT. As a result, several transient species could appear during the ESPT process. We hereby deploy subpicosecond time-resolved fluorescence upconversion (FLUP) and transient absorption (TA) spectroscopic techniques to understand the detailed photophysics of D-luciferin in water as well as in dimethyl sulfoxide (DMSO) and ethanol. These transient-state spectroscopic studies reveal the population of two kinds of hydrogen-bonded (HB) complexes (HBCs) in the excited singlet (S1) state─HBC-I, which is formed at the OH site of the hydroxy benzothiazole moiety with a proton-accepting solvent, and the other one is HBC-II, which is formed at the N atom site of the thiazoline moiety with a proton-donating solvent. This study provides a complete description of the mechanism of the deprotonation process in HBC-I through distinct identification and characterization of the spectroscopic properties and temporal dynamics of those transient species associated with the four stages of the ESPT process as proposed by the Eigen-Weller model. This study also identifies and characterizes HBC-II, which, however, does not participate in the deprotonation process but provides an efficient nonradiative relaxation mechanism via geminate proton recombination.
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Affiliation(s)
- Prabhat Sahu
- UM-DAE Centre for Excellence in Basic Sciences, Kalina Campus of Mumbai University, Santacruz (E), Mumbai 400098, India
| | - Sk Imadul Islam
- Department of Chemical and Biological Sciences, S. N. Bose National Centre for Basic Sciences, Block JD, Sector 3, Salt Lake, Kolkata 700106, India
| | - Rajib Kumar Mitra
- Department of Chemical and Biological Sciences, S. N. Bose National Centre for Basic Sciences, Block JD, Sector 3, Salt Lake, Kolkata 700106, India
| | - Dipak K Palit
- UM-DAE Centre for Excellence in Basic Sciences, Kalina Campus of Mumbai University, Santacruz (E), Mumbai 400098, India
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Cruz R, Ataka K, Heberle J, Kozuch J. Evaluating aliphatic CF, CF2, and CF3 groups as vibrational Stark effect reporters. J Chem Phys 2024; 160:204308. [PMID: 38814010 DOI: 10.1063/5.0198303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2024] [Accepted: 05/09/2024] [Indexed: 05/31/2024] Open
Abstract
Given the extensive use of fluorination in molecular design, it is imperative to understand the solvation properties of fluorinated compounds and the impact of the C-F bond on electrostatic interactions. Vibrational spectroscopy can provide direct insights into these interactions by using the C-F bond stretching [v(C-F)] as an electric field probe through the vibrational Stark effect (VSE). In this work, we explore the VSE of the three basic patterns of aliphatic fluorination, i.e., mono-, di-, and trifluorination in CF, CF2, and CF3 groups, respectively, and compare their response to the well-studied aromatic v(C-F). Magnitudes (i.e., Stark tuning rates) and orientations of the difference dipole vectors of the v(C-F)-containing normal modes were determined using density functional theory and a molecular dynamics (MD)-assisted solvatochromic analysis of model compounds in solvents of varying polarity. We obtain Stark tuning rates of 0.2-0.8 cm-1/(MV/cm), with smallest and largest electric field sensitivities for CFaliphatic and CF3,aliphatic, respectively. While average electric fields of solvation were oriented along the main symmetry axis of the CFn, and thus along its static dipole, the Stark tuning rate vectors were tilted by up to 87° potentially enabling to map electrostatics in multiple dimensions. We discuss the influence of conformational heterogeneity on spectral shifts and point out the importance of multipolar and/or polarizable MD force fields to describe the electrostatics of fluorinated molecules. The implications of this work are of direct relevance for studies of fluorinated molecules as found in pharmaceuticals, fluorinated peptides, and proteins.
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Affiliation(s)
- R Cruz
- Fachbereich Physik, Freie Universität Berlin, Berlin 14195, Germany
| | - K Ataka
- Fachbereich Physik, Freie Universität Berlin, Berlin 14195, Germany
| | - J Heberle
- Fachbereich Physik, Freie Universität Berlin, Berlin 14195, Germany
- Forschungsbau SupraFAB, Freie Universität Berlin, Berlin 14195, Germany
| | - J Kozuch
- Fachbereich Physik, Freie Universität Berlin, Berlin 14195, Germany
- Forschungsbau SupraFAB, Freie Universität Berlin, Berlin 14195, Germany
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Kwac K, Yang N, Ryan MJ, Zanni MT, Cho M. Molecular dynamics simulation study of water structure and dynamics on the gold electrode surface with adsorbed 4-mercaptobenzonitrile. J Chem Phys 2024; 160:064701. [PMID: 38341780 PMCID: PMC11219078 DOI: 10.1063/5.0189122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Accepted: 01/16/2024] [Indexed: 02/13/2024] Open
Abstract
Understanding water dynamics at charged interfaces is of great importance in various fields, such as catalysis, biomedical processes, and solar cell materials. In this study, we implemented molecular dynamics simulations of a system of pure water interfaced with Au electrodes, on one side of which 4-mercaptobenzonitrile (4-MBN) molecules are adsorbed. We calculated time correlation functions of various dynamic quantities, such as the hydrogen bond status of the N atom of the adsorbed 4-MBN molecules, the rotational motion of the water OH bond, hydrogen bonds between 4-MBN and water, and hydrogen bonds between water molecules in the interface region. Using the Luzar-Chandler model, we analyzed the hydrogen bond dynamics between a 4-MBN and a water molecule. The dynamic quantities we calculated can be divided into two categories: those related to the collective behavior of interfacial water molecules and the H-bond interaction between a water molecule and the CN group of 4-MBN. We found that these two categories of dynamic quantities exhibit opposite trends in response to applied potentials on the Au electrode. We anticipate that the present work will help improve our understanding of the interfacial dynamics of water in various electrolyte systems.
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Affiliation(s)
- Kijeong Kwac
- Center for Molecular Spectroscopy and Dynamics, Institute for Basic Science (IBS), Seoul 02841, Republic of Korea
| | - Nan Yang
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
| | - Matthew J. Ryan
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
| | - Martin T. Zanni
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
| | - Minhaeng Cho
- Authors to whom correspondence should be addressed: or
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