1
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Skandalis DA, Baliga VB, Goller B, Altshuler DA. The spatiotemporal richness of hummingbird wing deformations. J Exp Biol 2024:jeb.246223. [PMID: 38680114 DOI: 10.1242/jeb.246223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Accepted: 04/17/2024] [Indexed: 05/01/2024]
Abstract
Animals exhibit an abundant diversity of forms, and this diversity is even more evident when considering animals that can change shape on demand. The evolution of flexibility contributes to aspects of performance from propulsive efficiency to environmental navigation. It is, however, challenging to quantify and compare body parts that, by their nature, dynamically vary in shape over many time scales. Commonly, body configurations are tracked by labelled markers and quantified parametrically through conventional measures of size and shape (descriptor approach) or non-parametrically through data-driven analyses that broadly capture spatiotemporal deformation patterns (shape variable approach). We developed a weightless marker tracking technique and combined these analytic approaches to study wing morphological flexibility in hoverfeeding Anna's hummingbirds (Calypte anna). Four shape variables explained >95% of typical stroke cycle wing shape variation and were broadly correlated with specific conventional descriptors like wing twist and area. Moreover, shape variables decomposed wing deformations into pairs of in- and out-of-plane components at integer multiples of the stroke frequency. This property allowed us to identify spatiotemporal deformation profiles characteristic of hoverfeeding with experimentally imposed kinematic constraints, including through shape variables explaining <10% of typical shape variation. Hoverfeeding in front of a visual barrier restricted stroke amplitude and elicited increased stroke frequencies together with in- and out-of-plane deformations throughout the stroke cycle. Lifting submaximal loads increased stroke amplitudes at similar stroke frequencies together with prominent in-plane deformations during the upstroke and pronation. Our study highlights how spatially and temporally distinct changes in wing shape can contribute to agile fluidic locomotion.
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Affiliation(s)
| | - Vikram B Baliga
- Department of Zoology, University of British Columbia, Canada
| | - Benjamin Goller
- Department of Zoology, University of British Columbia, Canada
- College of Agriculture Data Services, Purdue University, USA
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2
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Han Z, Hayes OG, Partridge BE, Huang C, Mirkin CA. Reversible strain-promoted DNA polymerization. Sci Adv 2024; 10:eado8020. [PMID: 38657068 PMCID: PMC11042731 DOI: 10.1126/sciadv.ado8020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Accepted: 03/20/2024] [Indexed: 04/26/2024]
Abstract
Molecular strain can be introduced to influence the outcome of chemical reactions. Once a thermodynamic product is formed, however, reversing the course of a strain-promoted reaction is challenging. Here, a reversible, strain-promoted polymerization in cyclic DNA is reported. The use of nonhybridizing, single-stranded spacers as short as a single nucleotide in length can promote DNA cyclization. Molecular strain is generated by duplexing the spacers, leading to ring opening and subsequent polymerization. Then, removal of the strain-generating duplexers triggers depolymerization and cyclic dimer recovery via enthalpy-driven cyclization and entropy-mediated ring contraction. This reversibility is retained even when a protein is conjugated to the DNA strands, and the architecture of the protein assemblies can be modulated between bivalent and polyvalent states. This work underscores the utility of using DNA not only as a programmable ligand for assembly but also as a route to access restorable bonds, thus providing a molecular basis for DNA-based materials with shape-memory, self-healing, and stimuli-responsive properties.
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Affiliation(s)
- Zhenyu Han
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208, USA
| | - Oliver G. Hayes
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208, USA
| | - Benjamin E. Partridge
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208, USA
| | - Chi Huang
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208, USA
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3
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Shekhtman LM, Gates AJ, Barabási AL. Mapping philanthropic support of science. Sci Rep 2024; 14:9397. [PMID: 38658598 PMCID: PMC11043411 DOI: 10.1038/s41598-024-58367-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2023] [Accepted: 03/28/2024] [Indexed: 04/26/2024] Open
Abstract
While philanthropic support for science has increased in the past decade, there is limited quantitative knowledge about the patterns that characterize it and the mechanisms that drive its distribution. Here, we map philanthropic funding to universities and research institutions based on IRS tax forms from 685,397 non-profit organizations. We identify nearly one million grants supporting institutions involved in science and higher education, finding that in volume and scope, philanthropy is a significant source of funds, reaching an amount that rivals some of the key federal agencies like the NSF and NIH. Our analysis also reveals that philanthropic funders tend to focus locally, indicating that criteria beyond research excellence play an important role in funding decisions, and that funding relationships are stable, i.e. once a grant-giving relationship begins, it tends to continue in time. Finally, we show that the bipartite funder-recipient network displays a highly overrepresented motif indicating that funders who share one recipient also share other recipients and we show that this motif contains predictive power for future funding relationships. We discuss the policy implications of our findings on inequality in science, scientific progress, and the role of quantitative approaches to philanthropy.
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Affiliation(s)
- Louis M Shekhtman
- Network Science Institute, Northeastern University, Boston, MA, 02115, USA
| | - Alexander J Gates
- School of Data Science, University of Virginia, Charlottesville, VA, 22904, USA
| | - Albert-László Barabási
- Network Science Institute, Northeastern University, Boston, MA, 02115, USA.
- Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA, 02115, USA.
- Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, 02115, USA.
- Department of Network and Data Science, Central European University, Budapest, 1051, Hungary.
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4
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Kłos J, Tiesinga E, Kotochigova S. Quantum scattering of icosahedron fullerene C 60 with noble-gas atoms. Sci Rep 2024; 14:9267. [PMID: 38649408 DOI: 10.1038/s41598-024-59481-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Accepted: 04/11/2024] [Indexed: 04/25/2024] Open
Abstract
There exist multiple ways to cool neutral molecules. A front runner is the technique of buffer gas cooling, where momentum-changing collisions with abundant cold noble-gas atoms cool the molecules. This approach can, in principle, produce the most diverse samples of cold molecules. We present quantum mechanical and semiclassical calculations of the elastic scattering differential cross sections and rate coefficients of the C60 fullerene with He and Ar noble-gas atoms in order to quantify the effectiveness of buffer gas cooling for this molecule. We also develop new three-dimensional potential energy surfaces for this purpose using dispersion-corrected density functional theory (DFT) with counterpoise correction. The icosahedral anisotropy of the molecular system is reproduced by expanding the potential in terms of symmetry-allowed spherical harmonics. Long-range dispersion coefficients have been computed from frequency dependent polarizabilities of C60 and the noble-gas atoms. We find that the potential of the fullerene with He is about five times shallower than that with Ar. Anisotropic corrections are very weak for both systems and omitted in the quantum scattering calculations giving us a nearly quantitative estimate of elastic scattering observables. Finally, we have computed differential cross sections at the collision energies used in experiments by Han et al. (Chem Phys Lett 235:211, 1995), corrected for the sensitivity of their apparatus, and we find satisfactory agreement for C60 scattering with Ar.
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Affiliation(s)
- Jacek Kłos
- Department of Physics, Temple University, Philadelphia, PA, 19122, USA
| | - Eite Tiesinga
- Joint Quantum Institute, College Park, MD, 20742, USA
- National Institute of Standards and Technology, Gaithersburg, MD, 20899, USA
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5
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Ahsan R, Wu Z, Jalal SA, Kapadia R. Ultralow Power Electronic Analog of a Biological Fitzhugh-Nagumo Neuron. ACS Omega 2024; 9:18062-18071. [PMID: 38680341 PMCID: PMC11044232 DOI: 10.1021/acsomega.3c09936] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 03/14/2024] [Accepted: 03/26/2024] [Indexed: 05/01/2024]
Abstract
Here, we introduce an electronic circuit that mimics the functionality of a biological spiking neuron following the Fitzhugh-Nagumo (FN) model. The circuit consists of a tunnel diode that exhibits negative differential resistance (NDR) and an active inductive element implemented by a single MOSFET. The FN neuron converts a DC voltage excitation into voltage spikes analogous to biological action potentials. We predict an energy cost of 2 aJ/cycle through detailed simulation and modeling for these FN neurons. Such an FN neuron is CMOS compatible and enables ultralow power oscillatory and spiking neural network hardware. We demonstrate that FN neurons can be used for oscillator-based computing in a coupled oscillator network to form an oscillator Ising machine (OIM) that can solve computationally hard NP-complete max-cut problems while showing robustness toward process variations.
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Affiliation(s)
- Ragib Ahsan
- Department of Electrical
and Computer Engineering, University of
Southern California, Los Angeles 90089-0001, United
States
| | - Zezhi Wu
- Department of Electrical
and Computer Engineering, University of
Southern California, Los Angeles 90089-0001, United
States
| | - Seyedeh Atiyeh
Abbasi Jalal
- Department of Electrical
and Computer Engineering, University of
Southern California, Los Angeles 90089-0001, United
States
| | - Rehan Kapadia
- Department of Electrical
and Computer Engineering, University of
Southern California, Los Angeles 90089-0001, United
States
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6
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Wang YY, Wang YX, van Geldern S, Connolly T, Clerk AA, Wang C. Dispersive nonreciprocity between a qubit and a cavity. Sci Adv 2024; 10:eadj8796. [PMID: 38630825 PMCID: PMC11023507 DOI: 10.1126/sciadv.adj8796] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 03/13/2024] [Indexed: 04/19/2024]
Abstract
The dispersive interaction between a qubit and a cavity is ubiquitous in circuit and cavity quantum electrodynamics. It describes the frequency shift of one quantum mode in response to excitations in the other and, in closed systems, is necessarily bidirectional, i.e., reciprocal. Here, we present an experimental study of a nonreciprocal dispersive-type interaction between a transmon qubit and a superconducting cavity, arising from a common coupling to dissipative intermediary modes with broken time reversal symmetry. We characterize the qubit-cavity dynamics, including asymmetric frequency pulls and photon shot noise dephasing, under varying degrees of nonreciprocity by tuning the magnetic field bias of a ferrite component in situ. We introduce a general master equation model for nonreciprocal interactions in the dispersive regime, providing a compact description of the observed qubit-cavity dynamics agnostic to the intermediary system. Our result provides an example of quantum nonreciprocal phenomena beyond the typical paradigms of non-Hermitian Hamiltonians and cascaded systems.
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Affiliation(s)
- Ying-Ying Wang
- Department of Physics, University of Massachusetts-Amherst, Amherst, MA, USA
| | - Yu-Xin Wang
- Pritzker School of Molecular Engineering, University of Chicago, Chicago, IL, USA
| | - Sean van Geldern
- Department of Physics, University of Massachusetts-Amherst, Amherst, MA, USA
| | - Thomas Connolly
- Department of Physics, University of Massachusetts-Amherst, Amherst, MA, USA
| | - Aashish A. Clerk
- Pritzker School of Molecular Engineering, University of Chicago, Chicago, IL, USA
| | - Chen Wang
- Department of Physics, University of Massachusetts-Amherst, Amherst, MA, USA
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7
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Smith JW, Carnevale LN, Das A, Chen Q. Electron videography of a lipid-protein tango. Sci Adv 2024; 10:eadk0217. [PMID: 38630809 PMCID: PMC11023515 DOI: 10.1126/sciadv.adk0217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2023] [Accepted: 03/15/2024] [Indexed: 04/19/2024]
Abstract
Biological phenomena, from enzymatic catalysis to synaptic transmission, originate in the structural transformations of biomolecules and biomolecular assemblies in liquid water. However, directly imaging these nanoscopic dynamics without probes or labels has been a fundamental methodological challenge. Here, we developed an approach for "electron videography"-combining liquid phase electron microscopy with molecular modeling-with which we filmed the nanoscale structural fluctuations of individual, suspended, and unlabeled membrane protein nanodiscs in liquid. Systematic comparisons with biochemical data and simulation indicate the graphene encapsulation involved can afford sufficiently reduced effects of the illuminating electron beam for these observations to yield quantitative fingerprints of nanoscale lipid-protein interactions. Our results suggest that lipid-protein interactions delineate dynamically modified membrane domains across unexpectedly long ranges. Moreover, they contribute to the molecular mechanics of the nanodisc as a whole in a manner specific to the protein within. Overall, this work illustrates an experimental approach to film, quantify, and understand biomolecular dynamics at the nanometer scale.
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Affiliation(s)
- John W. Smith
- Department of Materials Science and Engineering, University of Illinois Urbana–Champaign, Urbana, IL 61801, USA
| | - Lauren N. Carnevale
- Department of Biochemistry, University of Illinois Urbana–Champaign, Urbana, IL 61801, USA
| | - Aditi Das
- School of Chemistry and Biochemistry, Parker H. Petit Institute for Bioengineering and Biosciences, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Qian Chen
- Department of Materials Science and Engineering, University of Illinois Urbana–Champaign, Urbana, IL 61801, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois Urbana–Champaign, Urbana, IL 61801, USA
- Department of Chemistry, University of Illinois Urbana–Champaign, Urbana, IL 61801, USA
- Materials Research Laboratory, University of Illinois Urbana–Champaign, Urbana, IL 61801, USA
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8
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Dillon A, Yusov A, Chaudhry MT, Newman JA, Demkiw KM, Woerpel KA, Lee AY, Ward MD. Supramolecular Mille-Feuille: Adaptive Guest Inclusion in a New Aliphatic Guanidinium Monosulfonate Hydrogen-Bonded Framework. Cryst Growth Des 2024; 24:3483-3490. [PMID: 38659662 PMCID: PMC11036357 DOI: 10.1021/acs.cgd.4c00215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Revised: 03/21/2024] [Accepted: 03/22/2024] [Indexed: 04/26/2024]
Abstract
During the past three decades, the ability of guanidinium arenesulfonate host frameworks to encapsulate a wide range of guests has been amply demonstrated, with more than 700 inclusion compounds realized. Herein, we report crystalline inclusion compounds based on a new aliphatic host, guanidinium cyclohexanemonosulfonate, which surprisingly exhibits four heretofore unobserved architectures, as described by the projection topologies of the organosulfonate residues above and below hydrogen-bonded guanidinium sulfonate sheets. The inclusion compounds adopt a layer motif of guanidinium sulfonate sheets interleaved with guest molecules, resembling a mille-feuille pastry. The aliphatic character of this remarkably simple host, combined with access to greater architectural diversity and adaptability, enables the host framework to accommodate a wide range of guests and promises to expand the utility of guanidinium organosulfonate hosts.
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Affiliation(s)
- Alexandra
M. Dillon
- Department
of Chemistry, New York University, New York, New York 10003, United States
| | - Anna Yusov
- Department
of Chemistry, New York University, New York, New York 10003, United States
| | - Mohammad T. Chaudhry
- Analytical
Research and Development, Merck & Co.,
Inc., Rahway, New Jersey 07065, United States
| | - Justin A. Newman
- Analytical
Research and Development, Merck & Co.,
Inc., Rahway, New Jersey 07065, United States
| | - Krystyna M. Demkiw
- Department
of Chemistry, New York University, New York, New York 10003, United States
| | - K. A. Woerpel
- Department
of Chemistry, New York University, New York, New York 10003, United States
| | - Alfred Y. Lee
- Analytical
Research and Development, Merck & Co.,
Inc., Rahway, New Jersey 07065, United States
| | - Michael D. Ward
- Department
of Chemistry, New York University, New York, New York 10003, United States
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9
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Hung NP, Van Duy N, Xuan CT, Thanh Le DT, Hung CM, Jin H, Hoa ND. Enhanced acetone gas-sensing characteristics of Pd-NiO nanorods/SnO 2 nanowires sensors. RSC Adv 2024; 14:12438-12448. [PMID: 38633484 PMCID: PMC11022183 DOI: 10.1039/d4ra01265h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Accepted: 04/10/2024] [Indexed: 04/19/2024] Open
Abstract
Acetone is a well-known volatile organic compound that is widely used in different industrial and domestic areas, but it can cause dangerous effects on human health. Thus, the fabrication of highly sensitive and selective sensors for recognition of acetone is incredibly important. Here, we prepared the SnO2/Pd-NiO (SPN) nanowires-based gas sensor for the detection of acetone, in which, the amount of Pd nanoparticles were varied to enhance the performance of the devices. We demonstrated that the acetone gas sensing performance of the SPN device was significantly enhanced, showing increases of 3.72 and 6.53 folds compared to pristine SnO2 and NiO sensors, respectively. The Pd-NiO 0.01% wt Pd SPN sensor (SPN-1) exhibited an excellent response (Ra/Rg = 14.88) toward 500 ppm acetone gas. The SPN-1 sensor also showed a fast gas response time of 11/150 seconds with 500 ppm Acetone at 450 °C, while the recovery time was 468/526 seconds. Additionally, the sensor showed good selectivity toward acetone over other reducing gases, such as NH3, CH4, and VOCs. With those results, the SPN-1 sensor shows superiority compared to sensors based on pure materials.
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Affiliation(s)
- Nguyen Phu Hung
- International Training Institute for Materials Science, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
- School of Materials Science and Engineering, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
| | - Nguyen Van Duy
- International Training Institute for Materials Science, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
- School of Materials Science and Engineering, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
| | - Chu Thi Xuan
- International Training Institute for Materials Science, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
- School of Materials Science and Engineering, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
| | - Dang Thi Thanh Le
- International Training Institute for Materials Science, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
- School of Materials Science and Engineering, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
| | - Chu Manh Hung
- International Training Institute for Materials Science, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
- School of Materials Science and Engineering, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
| | - Han Jin
- Institute of Micro-Nano Science and Technology, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University Shanghai 200240 China
| | - Nguyen Duc Hoa
- International Training Institute for Materials Science, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
- School of Materials Science and Engineering, Hanoi University of Science and Technology No 1 Dai Co Viet Hanoi Vietnam
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10
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Marzen SE, Riechers PM, Crutchfield JP. Complexity-calibrated benchmarks for machine learning reveal when prediction algorithms succeed and mislead. Sci Rep 2024; 14:8727. [PMID: 38622279 PMCID: PMC11018857 DOI: 10.1038/s41598-024-58814-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 04/03/2024] [Indexed: 04/17/2024] Open
Abstract
Recurrent neural networks are used to forecast time series in finance, climate, language, and from many other domains. Reservoir computers are a particularly easily trainable form of recurrent neural network. Recently, a "next-generation" reservoir computer was introduced in which the memory trace involves only a finite number of previous symbols. We explore the inherent limitations of finite-past memory traces in this intriguing proposal. A lower bound from Fano's inequality shows that, on highly non-Markovian processes generated by large probabilistic state machines, next-generation reservoir computers with reasonably long memory traces have an error probability that is at least ∼ 60 % higher than the minimal attainable error probability in predicting the next observation. More generally, it appears that popular recurrent neural networks fall far short of optimally predicting such complex processes. These results highlight the need for a new generation of optimized recurrent neural network architectures. Alongside this finding, we present concentration-of-measure results for randomly-generated but complex processes. One conclusion is that large probabilistic state machines-specifically, large ϵ -machines-are key to generating challenging and structurally-unbiased stimuli for ground-truthing recurrent neural network architectures.
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Affiliation(s)
- Sarah E Marzen
- W. M. Keck Science Department of Pitzer, Scripps, and Claremont McKenna College, Claremont, CA, 91711, USA.
| | - Paul M Riechers
- Beyond Institute for Theoretical Science, San Francisco, CA, USA
| | - James P Crutchfield
- Complexity Sciences Center and Physics Department, University of California at Davis, One Shields Avenue, Davis, CA, 95616, USA
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11
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Duggins P, Eliasmith C. A scalable spiking amygdala model that explains fear conditioning, extinction, renewal and generalization. Eur J Neurosci 2024. [PMID: 38616566 DOI: 10.1111/ejn.16338] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Revised: 02/03/2024] [Accepted: 03/11/2024] [Indexed: 04/16/2024]
Abstract
The amygdala (AMY) is widely implicated in fear learning and fear behaviour, but it remains unclear how the many biological components present within AMY interact to achieve these abilities. Building on previous work, we hypothesize that individual AMY nuclei represent different quantities and that fear conditioning arises from error-driven learning on the synapses between AMY nuclei. We present a computational model of AMY that (a) recreates the divisions and connections between AMY nuclei and their constituent pyramidal and inhibitory neurons; (b) accommodates scalable high-dimensional representations of external stimuli; (c) learns to associate complex stimuli with the presence (or absence) of an aversive stimulus; (d) preserves feature information when mapping inputs to salience estimates, such that these estimates generalize to similar stimuli; and (e) induces a diverse profile of neural responses within each nucleus. Our model predicts (1) defensive responses and neural activities in several experimental conditions, (2) the consequence of artificially ablating particular nuclei and (3) the tendency to generalize defensive responses to novel stimuli. We test these predictions by comparing model outputs to neural and behavioural data from animals and humans. Despite the relative simplicity of our model, we find significant overlap between simulated and empirical data, which supports our claim that the model captures many of the neural mechanisms that support fear conditioning. We conclude by comparing our model to other computational models and by characterizing the theoretical relationship between pattern separation and fear generalization in healthy versus anxious individuals.
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Affiliation(s)
- Peter Duggins
- Centre for Theoretical Neuroscience, University of Waterloo, Waterloo, Ontario, Canada
- Department of Systems Design Engineering, University of Waterloo, Waterloo, Ontario, Canada
| | - Chris Eliasmith
- Centre for Theoretical Neuroscience, University of Waterloo, Waterloo, Ontario, Canada
- Department of Systems Design Engineering, University of Waterloo, Waterloo, Ontario, Canada
- Department of Philosophy, University of Waterloo, Waterloo, Ontario, Canada
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12
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Travaglini L, Lam NT, Sawicki A, Cha HJ, Xu D, Micolich AP, Clark DS, Glover DJ. Fabrication of Electronically Conductive Protein-Heme Nanowires for Power Harvesting. Small 2024:e2311661. [PMID: 38597694 DOI: 10.1002/smll.202311661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 03/11/2024] [Indexed: 04/11/2024]
Abstract
Electronically conductive protein-based materials can enable the creation of bioelectronic components and devices from sustainable and nontoxic materials, while also being well-suited to interface with biological systems, such as living cells, for biosensor applications. However, as proteins are generally electrical insulators, the ability to render protein assemblies electroactive in a tailorable manner can usher in a plethora of useful materials. Here, an approach to fabricate electronically conductive protein nanowires is presented by aligning heme molecules in proximity along protein filaments, with these nanowires also possessing charge transfer abilities that enable energy harvesting from ambient humidity. The heme-incorporated protein nanowires demonstrate electron transfer over micrometer distances, with conductive atomic force microscopy showing individual nanowires having comparable conductance to other previously characterized heme-based bacterial nanowires. Exposure of multilayer nanowire films to humidity produces an electrical current, presumably through water molecules ionizing carboxyl groups in the filament and creating an unbalanced total charge distribution that is enhanced by the heme. Incorporation of heme and potentially other metal-center porphyrin molecules into protein nanostructures could pave the way for structurally- and electrically-defined protein-based bioelectronic devices.
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Affiliation(s)
- Lorenzo Travaglini
- School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW, 2052, Australia
| | - Nga T Lam
- School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW, 2052, Australia
| | - Artur Sawicki
- School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW, 2052, Australia
| | - Hee-Jeong Cha
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, CA, 94720, USA
| | - Dawei Xu
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, CA, 94720, USA
- CAS Key Laboratory for Biological Effects of Nanomaterials and Nanosafety, National Center for Nanoscience and Technology, Chinese Academy of Sciences, Beijing, 100190, China
| | - Adam P Micolich
- School of Physics, University of New South Wales, Sydney, NSW, 2052, Australia
| | - Douglas S Clark
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, CA, 94720, USA
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Dominic J Glover
- School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW, 2052, Australia
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13
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Coker ZN, Troyanova-Wood M, Steelman ZA, Ibey BL, Bixler JN, Scully MO, Yakovlev VV. Brillouin microscopy monitors rapid responses in subcellular compartments. Photonix 2024; 5:9. [PMID: 38618142 PMCID: PMC11006764 DOI: 10.1186/s43074-024-00123-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 02/12/2024] [Accepted: 03/11/2024] [Indexed: 04/16/2024]
Abstract
Measurements and imaging of the mechanical response of biological cells are critical for understanding the mechanisms of many diseases, and for fundamental studies of energy, signal and force transduction. The recent emergence of Brillouin microscopy as a powerful non-contact, label-free way to non-invasively and non-destructively assess local viscoelastic properties provides an opportunity to expand the scope of biomechanical research to the sub-cellular level. Brillouin spectroscopy has recently been validated through static measurements of cell viscoelastic properties, however, fast (sub-second) measurements of sub-cellular cytomechanical changes have yet to be reported. In this report, we utilize a custom multimodal spectroscopy system to monitor for the very first time the rapid viscoelastic response of cells and subcellular structures to a short-duration electrical impulse. The cytomechanical response of three subcellular structures - cytoplasm, nucleoplasm, and nucleoli - were monitored, showing distinct mechanical changes despite an identical stimulus. Through this pioneering transformative study, we demonstrate the capability of Brillouin spectroscopy to measure rapid, real-time biomechanical changes within distinct subcellular compartments. Our results support the promising future of Brillouin spectroscopy within the broad scope of cellular biomechanics.
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Affiliation(s)
- Zachary N. Coker
- Department of Physics & Astronomy, Texas A&M University, 4242 TAMU, College Station, TX 77843 USA
- SAIC, Fort Sam Houston, TX 78234 USA
| | | | - Zachary A. Steelman
- Air Force Research Laboratory, JBSA Fort Sam Houston, Fort Sam Houston, TX 78234 USA
| | - Bennett L. Ibey
- Air Force Research Laboratory, JBSA Fort Sam Houston, Fort Sam Houston, TX 78234 USA
| | - Joel N. Bixler
- Air Force Research Laboratory, JBSA Fort Sam Houston, Fort Sam Houston, TX 78234 USA
| | - Marlan O. Scully
- Department of Physics & Astronomy, Texas A&M University, 4242 TAMU, College Station, TX 77843 USA
- Institute for Quantum Science and Engineering, Texas A&M University, College Station, TX 77843 USA
| | - Vladislav V. Yakovlev
- Department of Physics & Astronomy, Texas A&M University, 4242 TAMU, College Station, TX 77843 USA
- Institute for Quantum Science and Engineering, Texas A&M University, College Station, TX 77843 USA
- Department of Biomedical Engineering, Texas A&M University, 3120 TAMU, 101 Bizzell Street, College Station, TX 77843 USA
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14
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Cook A, Dearborn MA, Anderberg TM, Vaidya K, Jureller JE, Esser-Kahn AP, Squires AH. Polymer Patterning by Laser-Induced Multipoint Initiation of Frontal Polymerization. ACS Appl Mater Interfaces 2024; 16:17973-17980. [PMID: 38418392 PMCID: PMC11009908 DOI: 10.1021/acsami.4c00216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Revised: 02/12/2024] [Accepted: 02/16/2024] [Indexed: 03/01/2024]
Abstract
Frontal polymerization (FP) is an approach for thermosetting plastics at a lower energy cost than an autoclave. The potential to generate simultaneous propagation of multiple polymerization fronts has been discussed as an exciting possibility. However, FP initiated at more than two points simultaneously has not been demonstrated. Multipoint initiation could enable both large-scale material fabrication and unique pattern generation. Here, the authors present laser-patterned photothermal heating as a method for simultaneous initiation of FP at multiple locations in a 2-D sample. Carbon black particles are mixed into liquid resin (dicyclopentadiene) to enhance absorption of light from a Ti:sapphire laser (800 nm) focused on a sample. The laser is time-shared by rapid steering among initiation points, generating polymerization using up to seven simultaneous points of initiation. This process results in the formation of both symmetric and asymmetric seam patterns resulting from the collision of fronts. The authors also present and validate a theoretical framework for predicting the seam patterns formed by front collisions. This framework allows the design of novel patterns via an inverse solution for determining the initiation points required to form a desired pattern. Future applications of this approach could enable rapid, energy-efficient manufacturing of novel composite-like patterned materials.
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Affiliation(s)
- Andrés
L. Cook
- Department
of Physics, University of Chicago, Chicago, Illinois 60637, United States
| | - Mason A. Dearborn
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
| | - Trevor M. Anderberg
- Department
of Physics, University of Chicago, Chicago, Illinois 60637, United States
| | - Kavya Vaidya
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
| | - Justin E. Jureller
- James
Franck Institute, University of Chicago, Chicago, Illinois 60637, United States
| | - Aaron P. Esser-Kahn
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
- Institute
for Biophysical Dynamics, University of
Chicago, Chicago, Illinois 60637, United States
| | - Allison H. Squires
- Pritzker
School of Molecular Engineering, University
of Chicago, Chicago, Illinois 60637, United States
- Institute
for Biophysical Dynamics, University of
Chicago, Chicago, Illinois 60637, United States
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15
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Hernández-Cano A, Ni Y, Zou Z, Zakeri A, Imani M. Hyperdimensional computing with holographic and adaptive encoder. Front Artif Intell 2024; 7:1371988. [PMID: 38655269 PMCID: PMC11037243 DOI: 10.3389/frai.2024.1371988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2024] [Accepted: 03/18/2024] [Indexed: 04/26/2024] Open
Abstract
Introduction Brain-inspired computing has become an emerging field, where a growing number of works focus on developing algorithms that bring machine learning closer to human brains at the functional level. As one of the promising directions, Hyperdimensional Computing (HDC) is centered around the idea of having holographic and high-dimensional representation as the neural activities in our brains. Such representation is the fundamental enabler for the efficiency and robustness of HDC. However, existing HDC-based algorithms suffer from limitations within the encoder. To some extent, they all rely on manually selected encoders, meaning that the resulting representation is never adapted to the tasks at hand. Methods In this paper, we propose FLASH, a novel hyperdimensional learning method that incorporates an adaptive and learnable encoder design, aiming at better overall learning performance while maintaining good properties of HDC representation. Current HDC encoders leverage Random Fourier Features (RFF) for kernel correspondence and enable locality-preserving encoding. We propose to learn the encoder matrix distribution via gradient descent and effectively adapt the kernel for a more suitable HDC encoding. Results Our experiments on various regression datasets show that tuning the HDC encoder can significantly boost the accuracy, surpassing the current HDC-based algorithm and providing faster inference than other baselines, including RFF-based kernel ridge regression. Discussion The results indicate the importance of an adaptive encoder and customized high-dimensional representation in HDC.
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Affiliation(s)
- Alejandro Hernández-Cano
- Department of Computer Science, École polytechnique fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Yang Ni
- Department of Computer Science, University of California, Irvine, Irvine, CA, United States
| | - Zhuowen Zou
- Department of Computer Science, University of California, Irvine, Irvine, CA, United States
| | - Ali Zakeri
- Department of Computer Science, University of California, Irvine, Irvine, CA, United States
| | - Mohsen Imani
- Department of Computer Science, University of California, Irvine, Irvine, CA, United States
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16
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Feld LG, Boehme SC, Morad V, Sahin Y, Kaul CJ, Dirin DN, Rainò G, Kovalenko MV. Quantifying Förster Resonance Energy Transfer from Single Perovskite Quantum Dots to Organic Dyes. ACS Nano 2024; 18:9997-10007. [PMID: 38547379 PMCID: PMC11008358 DOI: 10.1021/acsnano.3c11359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 03/07/2024] [Accepted: 03/20/2024] [Indexed: 04/10/2024]
Abstract
Colloidal quantum dots (QDs) are promising regenerable photoredox catalysts offering broadly tunable redox potentials along with high absorption coefficients. QDs have thus far been examined for various organic transformations, water splitting, and CO2 reduction. Vast opportunities emerge from coupling QDs with other homogeneous catalysts, such as transition metal complexes or organic dyes, into hybrid nanoassemblies exploiting energy transfer (ET), leveraging a large absorption cross-section of QDs and long-lived triplet states of cocatalysts. However, a thorough understanding and further engineering of the complex operational mechanisms of hybrid nanoassemblies require simultaneously controlling the surface chemistry of the QDs and probing dynamics at sufficient spatiotemporal resolution. Here, we probe the ET from single lead halide perovskite QDs, capped by alkylphospholipid ligands, to organic dye molecules employing single-particle photoluminescence spectroscopy with single-photon resolution. We identify a Förster-type ET by spatial, temporal, and photon-photon correlations in the QD and dye emission. Discrete quenching steps in the acceptor emission reveal stochastic photobleaching events of individual organic dyes, allowing a precise quantification of the transfer efficiency, which is >70% for QD-dye complexes with strong donor-acceptor spectral overlap. Our work explores the processes occurring at the QD/molecule interface and demonstrates the feasibility of sensitizing organic photocatalysts with QDs.
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Affiliation(s)
- Leon G. Feld
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa −
Swiss Federal Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
- National
Centre of Competence in Research (NCCR) Catalysis, ETH Zürich, CH-8093 Zürich, Switzerland
| | - Simon C. Boehme
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa −
Swiss Federal Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
| | - Viktoriia Morad
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa −
Swiss Federal Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
| | - Yesim Sahin
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa −
Swiss Federal Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
- National
Centre of Competence in Research (NCCR) Catalysis, ETH Zürich, CH-8093 Zürich, Switzerland
| | - Christoph J. Kaul
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa −
Swiss Federal Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
| | - Dmitry N. Dirin
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa −
Swiss Federal Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
- National
Centre of Competence in Research (NCCR) Catalysis, ETH Zürich, CH-8093 Zürich, Switzerland
| | - Gabriele Rainò
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa −
Swiss Federal Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
- National
Centre of Competence in Research (NCCR) Catalysis, ETH Zürich, CH-8093 Zürich, Switzerland
| | - Maksym V. Kovalenko
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, CH-8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa −
Swiss Federal Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
- National
Centre of Competence in Research (NCCR) Catalysis, ETH Zürich, CH-8093 Zürich, Switzerland
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17
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Chapman SC, Dudok de Wit T. A solar cycle clock for extreme space weather. Sci Rep 2024; 14:8249. [PMID: 38589701 PMCID: PMC11001994 DOI: 10.1038/s41598-024-58960-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Accepted: 04/04/2024] [Indexed: 04/10/2024] Open
Abstract
The variable solar cycle of activity is a long-standing problem in physics. It modulates the overall level of space weather activity at earth, which in turn can have significant societal impact. The Hilbert transform of the sunspot number is used to map the variable length, approximately 11 year Schwabe cycle onto a uniform clock. The clock is used to correlate extreme space weather seen in the aa index, the longest continuous geomagnetic record at earth, with the record of solar active region areas and latitudes since 1874. This shows that a clear switch-off of the most extreme space weather events occurs when > 90 % of solar active region areas have moved to within about 15° of the solar equator, from regions of high gradient in solar differential rotation which can power coronal mass ejections, to a region where solar differential rotation is almost constant with latitude. More moderate space weather events which coincide with 27 day solar rotation recurrences in the aa index, consistent with stable, persistent source regions of high speed streams, commence when the centroid of solar active region areas moves to within 15° of the solar equator. This offers a physical explanation for the longstanding identification of a two component cycle of activity in the aa index.
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Affiliation(s)
- S C Chapman
- Physics Department, Centre for Fusion, Space and Astrophysics, University of Warwick, Coventry, UK.
- International Space Science Institute, Bern, Switzerland.
- Department of Physics and Statistics, University of Tromso, Tromsö, Norway.
| | - T Dudok de Wit
- International Space Science Institute, Bern, Switzerland
- LPC2E, CNRS, CNES, University of Orléans, Orléans, France
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18
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Calabrese EJ, Selby PB. Muller and mutations: mouse study of George Snell (a postdoc of Muller) fails to confirm Muller's fruit fly findings, and Muller fails to cite Snell's findings. Arch Toxicol 2024:10.1007/s00204-024-03718-1. [PMID: 38573337 DOI: 10.1007/s00204-024-03718-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Accepted: 02/28/2024] [Indexed: 04/05/2024]
Abstract
In 1931, Hermann J. Muller's postdoctoral student, George D. Snell (Nobel Prize recipient--1980) initiated research to replicate with mice Muller's X-ray-induced mutational findings with fruit flies. Snell failed to induce the two types of mutations of interest, based on fly data (sex-linked lethals/recessive visible mutations) even though the study was well designed, used large doses of X-rays, and was published in Genetics. These findings were never cited by Muller, and the Snell paper (Snell, Genetics 20:545-567, 1935) did not cite the 1927 Muller paper (Muller, Science 66:84, 1927). This situation raises questions concerning how Snell wrote the paper (e.g., ignoring the significance of not providing support for Muller's findings in a mammal). The question may be raised whether professional pressures were placed upon Snell to downplay the significance of his findings, which could have negatively impacted the career of Muller and the LNT theory. While Muller would receive worldwide attention, and receive the Nobel Prize in 1946 "for the discovery that mutations can be induced by X-rays," Snell's negative mutation data were almost entirely ignored by his contemporary and subsequent radiation genetics/mutation researchers. This raises questions concerning how the apparent lack of interest in Snell's negative findings helped Muller professionally, including his success in using his fruit fly data to influence hereditary and cancer risk assessment and to obtain the Nobel Prize.
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Affiliation(s)
- Edward J Calabrese
- Toxicology, School of Public Health and Health Sciences, Department of Environmental Health Sciences, Morrill I, N344, University of Massachusetts, Amherst, MA, 01003, USA.
| | - Paul B Selby
- Retired from Oak Ridge National Laboratory at Oak Ridge, TN, 4088 Notting Hill Gate Road, Upper Arlington, OH, 43220, USA
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19
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Das A, Samayoa-Oviedo HY, Mohapatra M, Basu S, Laskin J. Enhancing Energy Storage Capacity of 3D Carbon Electrodes Using Soft Landing of Molecular Redox Mediators. Small 2024:e2311585. [PMID: 38576110 DOI: 10.1002/smll.202311585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 03/08/2024] [Indexed: 04/06/2024]
Abstract
The incorporation of redox-active species into the electric double layer is a powerful strategy for enhancing the energy density of supercapacitors. Polyoxometalates (POM) are a class of stable, redox-active species with multielectron activity, which is often used to tailor the properties of electrochemical interfaces. Traditional synthetic methods often result in interfaces containing a mixture of POM anions, unreactive counter ions, and neutral species. This leads to degradation in electrochemical performance due to aggregation and increased interfacial resistance. Another significant challenge is achieving the uniform and stable anchoring of POM anions on substrates to ensure the long-term stability of the electrochemical interface. These challenges are addressed by developing a mass spectrometry-based subambient deposition strategy for the selective deposition of POM anions onto engineered 3D porous carbon electrodes. Furthermore, positively charged functional groups are introduced on the electrode surface for efficient trapping of POM anions. This approach enables the deposition of purified POM anions uniformly through the pores of the 3D porous carbon electrode, resulting in unprecedented increase in the energy storage capacity of the electrodes. The study highlights the critical role of well-defined electrochemical interfaces in energy storage applications and offers a powerful method to achieve this through selective ion deposition.
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Affiliation(s)
- Arya Das
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
- CSIR-Institute of Minerals and Materials Technology, Bhubaneswar, Odisha, 751013, India
- Department of Chemistry, Purdue University, West Lafayette, IN, 47906, USA
| | | | - Mamata Mohapatra
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
- CSIR-Institute of Minerals and Materials Technology, Bhubaneswar, Odisha, 751013, India
| | - Suddhasatwa Basu
- CSIR-Institute of Minerals and Materials Technology, Bhubaneswar, Odisha, 751013, India
| | - Julia Laskin
- Department of Chemistry, Purdue University, West Lafayette, IN, 47906, USA
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20
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Wang W, Chopra B, Walawalkar V, Liang Z, Adams R, Deserno M, Ren X, Taylor RE. Cell-Surface Binding of DNA Nanostructures for Enhanced Intracellular and Intranuclear Delivery. ACS Appl Mater Interfaces 2024; 16:15783-15797. [PMID: 38497300 PMCID: PMC10995898 DOI: 10.1021/acsami.3c18068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2023] [Revised: 02/20/2024] [Accepted: 03/04/2024] [Indexed: 03/19/2024]
Abstract
DNA nanostructures (DNs) have found increasing use in biosensing, drug delivery, and therapeutics because of their customizable assembly, size and shape control, and facile functionalization. However, their limited cellular uptake and nuclear delivery have hindered their effectiveness in these applications. Here, we demonstrate the potential of applying cell-surface binding as a general strategy to enable rapid enhancement of intracellular and intranuclear delivery of DNs. By targeting the plasma membrane via cholesterol anchors or the cell-surface glycocalyx using click chemistry, we observe a significant 2 to 8-fold increase in the cellular uptake of three distinct types of DNs that include nanospheres, nanorods, and nanotiles, within a short time frame of half an hour. Several factors are found to play a critical role in modulating the uptake of DNs, including their geometries, the valency, positioning and spacing of binding moieties. Briefly, nanospheres are universally preferable for cell surface attachment and internalization. However, edge-decorated nanotiles compensate for their geometry deficiency and outperform nanospheres in both categories. In addition, we confirm the short-term structural stability of DNs by incubating them with cell medium and cell lysate. Further, we investigate the endocytic pathway of cell-surface bound DNs and reveal that it is an interdependent process involving multiple pathways, similar to those of unmodified DNs. Finally, we demonstrate that cell-surface attached DNs exhibit a substantial enhancement in the intranuclear delivery. Our findings present an application that leverages cell-surface binding to potentially overcome the limitations of low cellular uptake, which may strengthen and expand the toolbox for effective cellular and nuclear delivery of DNA nanostructure systems.
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Affiliation(s)
- Weitao Wang
- Department
of Mechanical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
| | - Bhavya Chopra
- Department
of Biomedical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
| | - Vismaya Walawalkar
- Department
of Mechanical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
| | - Zijuan Liang
- Department
of Mechanical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
| | - Rebekah Adams
- Department
of Mechanical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
| | - Markus Deserno
- Department
of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Xi Ren
- Department
of Mechanical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
- Department
of Biomedical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
| | - Rebecca E. Taylor
- Department
of Mechanical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
- Department
of Biomedical Engineering, Carnegie Mellon
University, Pittsburgh, Pennsylvania 15213, United States
- Department
of Electrical and Computer Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
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21
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Deng B, Wang Z, Choi CH, Li G, Yuan Z, Chen J, Luong DX, Eddy L, Shin B, Lathem A, Chen W, Cheng Y, Xu S, Liu Q, Han Y, Yakobson BI, Zhao Y, Tour JM. Kinetically Controlled Synthesis of Metallic Glass Nanoparticles with Expanded Composition Space. Adv Mater 2024; 36:e2309956. [PMID: 38305742 DOI: 10.1002/adma.202309956] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 01/29/2024] [Indexed: 02/03/2024]
Abstract
Nanoscale metallic glasses offer opportunities for investigating fundamental properties of amorphous solids and technological applications in biomedicine, microengineering, and catalysis. However, their top-down fabrication is limited by bulk counterpart availability, and bottom-up synthesis remains underexplored due to strict formation conditions. Here, a kinetically controlled flash carbothermic reaction is developed, featuring ultrafast heating (>105 K s-1) and cooling rates (>104 K s-1), for synthesizing metallic glass nanoparticles within milliseconds. Nine compositional permutations of noble metals, base metals, and metalloid (M1─M2─P, M1 = Pt/Pd, M2 = Cu/Ni/Fe/Co/Sn) are synthesized with widely tunable particle sizes and substrates. Through combinatorial development, a substantially expanded composition space for nanoscale metallic glass is discovered compared to bulk counterpart, revealing that the nanosize effect enhances glass forming ability. Leveraging this, several nanoscale metallic glasses are synthesized with composition that have never, to the knowledge, been synthesized in bulk. The metallic glass nanoparticles exhibit high activity in heterogeneous catalysis, outperforming crystalline metal alloy nanoparticles.
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Affiliation(s)
- Bing Deng
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
- School of Environment, Tsinghua University, Beijing, 100084, China
| | - Zhe Wang
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
| | - Chi Hun Choi
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, 77005, USA
| | - Gang Li
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
| | - Zhe Yuan
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
| | - Jinhang Chen
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
| | - Duy Xuan Luong
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
- Applied Physics Program, Rice University, Houston, TX, 77005, USA
| | - Lucas Eddy
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
- Applied Physics Program, Rice University, Houston, TX, 77005, USA
| | - Bongki Shin
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, 77005, USA
| | - Alexander Lathem
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
- Applied Physics Program, Rice University, Houston, TX, 77005, USA
| | - Weiyin Chen
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
| | - Yi Cheng
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
| | - Shichen Xu
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
| | - Qiming Liu
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
| | - Yimo Han
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, 77005, USA
| | - Boris I Yakobson
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, 77005, USA
- Smalley-Curl Institute, Rice University, Houston, TX, 77005, USA
| | - Yufeng Zhao
- Department of Science and Mathematics, Corban University, 5000 Deer Park Drive SE, Salem, OR, 97317, USA
| | - James M Tour
- Department of Chemistry, Rice University, Houston, TX, 77005, USA
- Department of Materials Science and NanoEngineering, Rice University, Houston, TX, 77005, USA
- Smalley-Curl Institute, Rice University, Houston, TX, 77005, USA
- NanoCarbon Center and the Rice Advanced Materials Institute, Rice University, Houston, TX, 77005, USA
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22
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Brantingham PJ, Quintana-Navarrete M, Iliff C, Uchida CD, Tita GE. Situational and Victim Correlates of Increased Case Fatality Rates in Los Angeles Shootings, 2005-2021. J Urban Health 2024; 101:272-279. [PMID: 38546938 PMCID: PMC11052931 DOI: 10.1007/s11524-024-00845-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 02/28/2024] [Indexed: 04/28/2024]
Abstract
The gun assault case fatality rate measures the fraction of shooting victims who die from their wounds. Considerable debate has surrounded whether gun assault case fatality rates have changed over time and what factors may be involved. We use crime event data from Los Angeles to examine the victim and situational correlates of gun assault case fatality rates over time. We estimated log binomial regression models for the probability of death in each year from 2005 to 2021, conditioned on situational and victim characteristics of the crime. Case fatality rates increased by around 1.3% per year between 2005 and 2021 from around 15.9 to 19.7%. Baseline case fatality rates differed systematically by most situational and victim but followed similar temporal trends. Only victim age significantly covaried with the temporal trend in case fatality rates. An individual shot in Los Angeles in 2021 was 23.7% more likely to die than the equivalent victim in 2005. The steady increase in case fatality rates suggests that there were around 394 excess fatalities over what would have occurred if case fatality rates remained at the 2005 level. Increases in the average age of victims over time may contribute to the general temporal trend. We hypothesize that older victims are more likely to be shot indoors where lethal close-range wounds are more likely.
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Affiliation(s)
- P Jeffrey Brantingham
- Department of Anthropology, University of California, Los Angeles, 341 Haines Hall, Los Angeles, CA, 90095, USA.
| | | | - Clarissa Iliff
- Department of Criminology, Law & Society, 2309 Social Ecology II, Irvine, CA, 92697, USA
| | - Craig D Uchida
- Justice & Security Strategies, Inc., PO Box 6188, Silver Spring, MD, 20916, USA
| | - George E Tita
- Department of Criminology, Law & Society, 2309 Social Ecology II, Irvine, CA, 92697, USA
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23
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Kim M, Zhang G, Jang S, Lee S, Suo Z, Kim SM. Fatigue-Resistant Polymer Electrolyte Membranes for Fuel Cells. Adv Mater 2024; 36:e2308288. [PMID: 38161259 DOI: 10.1002/adma.202308288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 12/16/2023] [Indexed: 01/03/2024]
Abstract
In a hydrogen fuel cell, an electrolyte membrane conducts protons, but blocks electrons, hydrogen molecules, and oxygen molecules. The fuel cell often runs unsteadily, resulting in fluctuating water production, causing the membrane to swell and contract. The cyclic deformation can cause fatigue crack growth. This paper describes an approach to develop a fatigue-resistant polymer electrolyte membrane. The membrane is prepared by forming an interpenetrating network of a plastic electrolyte and a rubber. The former conducts protons, and the latter enhances fatigue resistance. The introduction of the rubber modestly reduces electrochemical performance, but significantly increases fatigue threshold and lifespan. Compared to pristine plastic electrolyte, Nafion, an interpenetrating network of Nafion and perfluoropolyether (PFPE) reduces the maximum power density by 20%, but increases the fatigue threshold by 175%. Under the wet/dry accelerated stress test, the fuel cell with the Nafion-PFPE membrane has a lifespan 1.7 times that of a fuel cell with the Nafion membrane.
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Affiliation(s)
- Minju Kim
- Department of Mechanical Engineering, Incheon National University, Incheon, 22012, Republic of Korea
| | - Guogao Zhang
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, 02138, USA
| | - Segeun Jang
- School of Mechanical Engineering, Kookmin University, Seoul, 02707, Republic of Korea
| | - Sanghyeok Lee
- School of Mechanical Engineering, Kookmin University, Seoul, 02707, Republic of Korea
| | - Zhigang Suo
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, 02138, USA
| | - Sang Moon Kim
- Department of Mechanical Engineering, Incheon National University, Incheon, 22012, Republic of Korea
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24
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Ede SR, Yu H, Sung CH, Kisailus D. Bio-Inspired Functional Materials for Environmental Applications. Small Methods 2024; 8:e2301227. [PMID: 38133492 DOI: 10.1002/smtd.202301227] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Indexed: 12/23/2023]
Abstract
With the global population expected to reach 9.7 billion by 2050, there is an urgent need for advanced materials that can address existing and developing environmental issues. Many current synthesis processes are environmentally unfriendly and often lack control over size, shape, and phase of resulting materials. Based on knowledge from biological synthesis and assembly processes, as well as their resulting functions (e.g., photosynthesis, self-healing, anti-fouling, etc.), researchers are now beginning to leverage these biological blueprints to advance bio-inspired pathways for functional materials for water treatment, air purification and sensing. The result has been the development of novel materials that demonstrate enhanced performance and address sustainability. Here, an overview of the progress and potential of bio-inspired methods toward functional materials for environmental applications is provided. The challenges and opportunities for this rapidly expanding field and aim to provide a valuable resource for researchers and engineers interested in developing sustainable and efficient processes and technologies is discussed.
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Affiliation(s)
- Sivasankara Rao Ede
- Department of Materials Science and Engineering, University of California, Irvine, California, 92697, USA
| | - Haitao Yu
- Department of Materials Science and Engineering, University of California, Irvine, California, 92697, USA
| | - Chao Hsuan Sung
- Department of Materials Science and Engineering, University of California, Irvine, California, 92697, USA
| | - David Kisailus
- Department of Materials Science and Engineering, University of California, Irvine, California, 92697, USA
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25
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Yee H, Lee JI, Park DM, Jung K, Lee S, Kim NH, Kim J, Kim HJ, Kang MS. Extending the Operational Lifetime of Electrochemiluminescence Devices by Installing a Floating Bipolar Electrode. Small 2024; 20:e2307190. [PMID: 38009522 DOI: 10.1002/smll.202307190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2023] [Revised: 10/25/2023] [Indexed: 11/29/2023]
Abstract
Electrochemiluminescence (ECL) holds significant promise for the development of cost-effective light-emitting devices because of its simple structure. However, conventional ECL devices (ECLDs) have a major limitation of short operational lifetimes, rendering them impractical for real-world applications. Typically, the luminescence of these devices lasts no longer than a few minutes during operation. In the current study, a novel architecture is provided for ECLDs that addresses this luminescence lifespan issue. The device architecture features an ECL active layer between two coplanar driving electrodes and a third floating bipolar electrode. The inclusion of the floating bipolar electrode enables modulating the electrical-field distribution within the active layer when a bias is applied between the driving electrodes. This, in turn, enables the use of opaque yet electrochemically stable noble metals as the driving electrodes while allowing ECL light to escape through the transparent floating bipolar electrode. A significant extension on operational lifetime is achieved, defined as the time required for the initial luminance (>100 cd m-2) to decrease by 50%, surpassing 1 h. This starkly contrasts the short lifetime (<1 min) attained by ECLDs in a conventional sandwich-type architecture with two transparent electrodes. These results provide simple strategies for developing durable ECL-based light-emitting devices.
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Affiliation(s)
- Hyeono Yee
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
| | - Jong Ik Lee
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
| | - Dong Mok Park
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
| | - Keonhee Jung
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
| | - Seunghan Lee
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
| | - Nam Hun Kim
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
| | - Jungwook Kim
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
| | - Hyeong Jun Kim
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
| | - Moon Sung Kang
- Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, 04107, Republic of Korea
- Institute of Emergent Materials, Ricci Institute of Basic Science, Sogang University, Seoul, 04107, Republic of Korea
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26
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Calabrese EJ, Hayes AW, Pressman P, Dhawan G, Kapoor R, Agathokleous E, Calabrese V. Flavonoids commonly induce hormetic responses. Arch Toxicol 2024; 98:1237-1240. [PMID: 38367038 DOI: 10.1007/s00204-024-03684-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Accepted: 01/17/2024] [Indexed: 02/19/2024]
Abstract
The present paper provides a new perspective of previously published findings by Siwak (Food Chem 141:1227-1241, 2013) which showed that 15 structurally diverse flavonoids reduced toxicity (i.e., enhanced cell viability) from hypochlorite using the MTT assay within a pre-conditioning experimental protocol, with each agent showing a similar biphasic concentration response relationship. We use this Commentary to point out that each of the concentration response relationships are consistent with the hormetic dose response. The paper of Siwak (Food Chem 141:1227-1241, 2013) is unique in that it provides a comparison of a relatively large number of agents using the identical experimental protocol.
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Affiliation(s)
- Edward J Calabrese
- School of Public Health and Health Sciences, Department of Environmental Health, Morrill I-N344, University of Massachusetts, Amherst, MA, 01003, USA.
| | - A Wallace Hayes
- Center for Environmental Occupational Risk Analysis and Management, College of Public Health, University of South Florida, Tampa, FL, USA
| | - Peter Pressman
- University of Maine, 5728 Fernald Hall, Room 201, Orono, ME, 04469, USA
| | - Gaurav Dhawan
- Sri Guru Ram Das (SGRD), University of Health Sciences, Amritsar, India
| | - Rachna Kapoor
- Saint Francis Hospital and Medical Center, Hartford, CT, USA
| | - Evgenios Agathokleous
- School of Ecology and Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, 210044, China
| | - Vittorio Calabrese
- Department of Biomedical and Biotechnological Sciences, School of Medicine, University of Catania, Via Santa Sofia 97, 95123, Catania, Italy
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27
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Jain P, Huber AE, Rockwell FE, Sen S, Holbrook NM, Stroock AD. Localized measurements of water potential reveal large loss of conductance in living tissues of maize leaves. Plant Physiol 2024; 194:2288-2300. [PMID: 38128552 PMCID: PMC10980393 DOI: 10.1093/plphys/kiad679] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Revised: 10/25/2023] [Accepted: 11/30/2023] [Indexed: 12/23/2023]
Abstract
The water status of the living tissue in leaves between the xylem and stomata (outside xylem zone (OXZ) plays a critical role in plant function and global mass and energy balance but has remained largely inaccessible. We resolve the local water relations of OXZ tissue using a nanogel reporter of water potential (ψ), AquaDust, that enables an in situ, nondestructive measurement of both ψ of xylem and highly localized ψ at the terminus of transpiration in the OXZ. Working in maize (Zea mays L.), these localized measurements reveal gradients in the OXZ that are several folds larger than those based on conventional methods and values of ψ in the mesophyll apoplast well below the macroscopic turgor loss potential. We find a strong loss of hydraulic conductance in both the bundle sheath and the mesophyll with decreasing xylem potential but not with evaporative demand. Our measurements suggest the OXZ plays an active role in regulating the transpiration path, and our methods provide the means to study this phenomenon.
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Affiliation(s)
- Piyush Jain
- Sibley School of Mechanical and Aerospace Engineering, Cornell University, Ithaca, NY 14853, USA
| | - Annika E Huber
- Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY 14853, USA
| | - Fulton E Rockwell
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | - Sabyasachi Sen
- Sibley School of Mechanical and Aerospace Engineering, Cornell University, Ithaca, NY 14853, USA
| | - Noel Michele Holbrook
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | - Abraham D Stroock
- Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY 14853, USA
- School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA
- Kavli Institute at Cornell for Nanoscale Science, Cornell University, Ithaca, NY 14853, USA
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28
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Boyce A, Li H, Wilson NC, Acil D, Shams-Ansari A, Chakravarthi S, Pederson C, Shen Q, Yama N, Fu KMC, Loncar M, Mikkelsen MH. Plasmonic Diamond Membranes for Ultrafast Silicon Vacancy Emission. Nano Lett 2024; 24:3575-3580. [PMID: 38478720 PMCID: PMC10979444 DOI: 10.1021/acs.nanolett.3c04002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Revised: 02/16/2024] [Accepted: 02/20/2024] [Indexed: 03/28/2024]
Abstract
Silicon vacancy centers (SiVs) in diamond have emerged as a promising platform for quantum sciences due to their excellent photostability, minimal spectral diffusion, and substantial zero-phonon line emission. However, enhancing their slow nanosecond excited-state lifetime by coupling to optical cavities remains an outstanding challenge, as current demonstrations are limited to ∼10-fold. Here, we couple negatively charged SiVs to sub-diffraction-limited plasmonic cavities and achieve an instrument-limited ≤8 ps lifetime, corresponding to a 135-fold spontaneous emission rate enhancement and a 19-fold photoluminescence enhancement. Nanoparticles are printed on ultrathin diamond membranes on gold films which create arrays of plasmonic nanogap cavities with ultrasmall volumes. SiVs implanted at 5 and 10 nm depths are examined to elucidate surface effects on their lifetime and brightness. The interplay between cavity, implantation depth, and ultrathin diamond membranes provides insights into generating ultrafast, bright SiV emission for next-generation diamond devices.
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Affiliation(s)
- Andrew
M. Boyce
- Department
of Electrical and Computer Engineering, Duke University, Durham, North Carolina 27708, United States
| | - Hengming Li
- Department
of Electrical and Computer Engineering, Duke University, Durham, North Carolina 27708, United States
| | - Nathaniel C. Wilson
- Department
of Physics, Duke University, Durham, North Carolina 27708, United States
| | - Deniz Acil
- Department
of Electrical and Computer Engineering, Duke University, Durham, North Carolina 27708, United States
| | - Amirhassan Shams-Ansari
- John
A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Srivatsa Chakravarthi
- Department
of Physics, University of Washington, Seattle, Washington 98195, United States
| | - Christian Pederson
- Department
of Physics, University of Washington, Seattle, Washington 98195, United States
| | - Qixin Shen
- Department
of Physics, Duke University, Durham, North Carolina 27708, United States
| | - Nicholas Yama
- Department
of Electrical and Computer Engineering, University of Washington, Seattle, Washington 98195, United States
| | - Kai-Mei C. Fu
- Department
of Physics, University of Washington, Seattle, Washington 98195, United States
- Department
of Electrical and Computer Engineering, University of Washington, Seattle, Washington 98195, United States
| | - Marko Loncar
- John
A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Maiken H. Mikkelsen
- Department
of Electrical and Computer Engineering, Duke University, Durham, North Carolina 27708, United States
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29
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Lublin D, Hao T, Malyala R, Kisailus D. Multiscale mechanical characterization of biobased photopolymers towards sustainable vat polymerization 3D printing. RSC Adv 2024; 14:10422-10430. [PMID: 38567338 PMCID: PMC10985463 DOI: 10.1039/d4ra00574k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Accepted: 03/19/2024] [Indexed: 04/04/2024] Open
Abstract
In vat polymerization (VP) 3D printing, there is an urgent need to expand characterization efforts for resins derived from natural resources to counter the increasing consumption of fossil fuels required to synthesize conventional monomers. Here, we apply multiscale mechanical characterization techniques to interrogate a 3D printed biobased copolymer along a controlled range of monomer ratios. We varied the concentration of two dissimilar monomers to derive structural information about the polymer networks. Current research primarily considers the macroscale, but recent understanding of the process-induced anisotropy in 3D printed layers suggests a multiscale approach is critical. By combining typical macroscopic techniques with micro- and nanoscale analogues, clear correlations in the processing-structure-property relationships appeared. We observed that measured moduli were always greater via surface-localized methods, but property differences between formulations were easier to identify. As researchers continue to develop novel sustainable biopolymers that match or exceed the performance of commercial resins, it is vital to understand the multiscale relationships between the VP process, the structure of the formed polymer networks, and the resultant properties.
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Affiliation(s)
- Derek Lublin
- Materials and Manufacturing Technology Program, School of Engineering, University of California at Irvine Irvine CA 92697 USA
- Glidewell Dental Irvine CA 92612 USA
| | - Taige Hao
- Department of Materials Science and Engineering, University of California at Irvine Irvine CA 92697 USA
| | | | - David Kisailus
- Department of Materials Science and Engineering, University of California at Irvine Irvine CA 92697 USA
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30
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Zhao B, Ren G, Mei H, Wu VC, Singh S, Jung GY, Chen H, Giovine R, Niu S, Thind AS, Salman J, Settineri NS, Chakoumakos BC, Manley ME, Hermann RP, Lupini AR, Chi M, Hachtel JA, Simonov A, Teat SJ, Clément RJ, Kats MA, Ravichandran J, Mishra R. Giant Modulation of Refractive Index from Picoscale Atomic Displacements. Adv Mater 2024:e2311559. [PMID: 38520395 DOI: 10.1002/adma.202311559] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 02/28/2024] [Indexed: 03/25/2024]
Abstract
It is shown that structural disorder-in the form of anisotropic, picoscale atomic displacements-modulates the refractive index tensor and results in the giant optical anisotropy observed in BaTiS3, a quasi-1D hexagonal chalcogenide. Single-crystal X-ray diffraction studies reveal the presence of antipolar displacements of Ti atoms within adjacent TiS6 chains along the c-axis, and threefold degenerate Ti displacements in the a-b plane. 47/49Ti solid-state NMR provides additional evidence for those Ti displacements in the form of a three-horned NMR lineshape resulting from a low symmetry local environment around Ti atoms. Scanning transmission electron microscopy is used to directly observe the globally disordered Ti a-b plane displacements and find them to be ordered locally over a few unit cells. First-principles calculations show that the Ti a-b plane displacements selectively reduce the refractive index along the ab-plane, while having minimal impact on the refractive index along the chain direction, thus resulting in a giant enhancement in the optical anisotropy. By showing a strong connection between structural disorder with picoscale displacements and the optical response in BaTiS3, this study opens a pathway for designing optical materials with high refractive index and functionalities such as large optical anisotropy and nonlinearity.
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Affiliation(s)
- Boyang Zhao
- Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, Los Angeles, CA, 90089, USA
| | - Guodong Ren
- Institute of Materials Science and Engineering, Washington University in St. Louis, St. Louis, MO, 63130, USA
| | - Hongyan Mei
- Department of Electrical and Computer Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - Vincent C Wu
- Materials Department and Materials Research Laboratory, University of California, Santa Barbara, CA, 93106, USA
| | - Shantanu Singh
- Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, Los Angeles, CA, 90089, USA
| | - Gwan Yeong Jung
- Department of Mechanical Engineering and Materials Science, Washington University in St. Louis, St. Louis, MO, 63130, USA
| | - Huandong Chen
- Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, Los Angeles, CA, 90089, USA
| | - Raynald Giovine
- Materials Department and Materials Research Laboratory, University of California, Santa Barbara, CA, 93106, USA
| | - Shanyuan Niu
- Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, Los Angeles, CA, 90089, USA
- College of Engineering and Applied Sciences, National Laboratory of Solid State Microstructures, Nanjing University, Nanjing, 210093, China
| | - Arashdeep S Thind
- Institute of Materials Science and Engineering, Washington University in St. Louis, St. Louis, MO, 63130, USA
| | - Jad Salman
- Department of Electrical and Computer Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - Nick S Settineri
- Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Bryan C Chakoumakos
- Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Michael E Manley
- Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Raphael P Hermann
- Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Andrew R Lupini
- Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Miaofang Chi
- Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Jordan A Hachtel
- Center for Nanophase Materials Sciences, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Arkadiy Simonov
- Department of Materials, ETH Zurich, Vladimir-Prelog-Weg 1-5/10, Zürich, 8093, Switzerland
| | - Simon J Teat
- Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Raphaële J Clément
- Materials Department and Materials Research Laboratory, University of California, Santa Barbara, CA, 93106, USA
| | - Mikhail A Kats
- Department of Electrical and Computer Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - Jayakanth Ravichandran
- Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, Los Angeles, CA, 90089, USA
- Ming Hsieh Department of Electrical Engineering, University of Southern California, Los Angeles, CA, 90089, USA
- Core Center of Excellence in Nano Imaging, University of Southern California, Los Angeles, CA, 90089, USA
| | - Rohan Mishra
- Institute of Materials Science and Engineering, Washington University in St. Louis, St. Louis, MO, 63130, USA
- Department of Mechanical Engineering and Materials Science, Washington University in St. Louis, St. Louis, MO, 63130, USA
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31
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Ramezani F, Strasbourg M, Parvez S, Saxena R, Jariwala D, Borys NJ, Whitaker BM. Predicting quantum emitter fluctuations with time-series forecasting models. Sci Rep 2024; 14:6920. [PMID: 38519600 PMCID: PMC10959974 DOI: 10.1038/s41598-024-56517-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Accepted: 03/07/2024] [Indexed: 03/25/2024] Open
Abstract
2D materials have important fundamental properties allowing for their use in many potential applications, including quantum computing. Various Van der Waals materials, including Tungsten disulfide (WS2), have been employed to showcase attractive device applications such as light emitting diodes, lasers and optical modulators. To maximize the utility and value of integrated quantum photonics, the wavelength, polarization and intensity of the photons from a quantum emission (QE) must be stable. However, random variation of emission energy, caused by the inhomogeneity in the local environment, is a major challenge for all solid-state single photon emitters. In this work, we assess the random nature of the quantum fluctuations, and we present time series forecasting deep learning models to analyse and predict QE fluctuations for the first time. Our trained models can roughly follow the actual trend of the data and, under certain data processing conditions, can predict peaks and dips of the fluctuations. The ability to anticipate these fluctuations will allow physicists to harness quantum fluctuation characteristics to develop novel scientific advances in quantum computing that will greatly benefit quantum technologies.
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Affiliation(s)
- Fereshteh Ramezani
- Electrical and Computer Engineering Department, Montana State University, Bozeman, USA.
| | | | - Sheikh Parvez
- Department of Physics, Montana State University, Bozeman, USA
- Materials Science Program, Montana State University, Bozeman, USA
| | - Ravindra Saxena
- Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, USA
| | - Deep Jariwala
- Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, USA
| | - Nicholas J Borys
- Department of Physics, Montana State University, Bozeman, USA
- Materials Science Program, Montana State University, Bozeman, USA
- Optical Technology Center, Montana State University, Bozeman, USA
| | - Bradley M Whitaker
- Electrical and Computer Engineering Department, Montana State University, Bozeman, USA
- Optical Technology Center, Montana State University, Bozeman, USA
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32
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Stilgoe A, Favre-Bulle IA, Watson ML, Gomez-Godinez V, Berns MW, Preece D, Rubinsztein-Dunlop H. Shining Light in Mechanobiology: Optical Tweezers, Scissors, and Beyond. ACS Photonics 2024; 11:917-940. [PMID: 38523746 PMCID: PMC10958612 DOI: 10.1021/acsphotonics.4c00064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Revised: 02/22/2024] [Accepted: 02/23/2024] [Indexed: 03/26/2024]
Abstract
Mechanobiology helps us to decipher cell and tissue functions by looking at changes in their mechanical properties that contribute to development, cell differentiation, physiology, and disease. Mechanobiology sits at the interface of biology, physics and engineering. One of the key technologies that enables characterization of properties of cells and tissue is microscopy. Combining microscopy with other quantitative measurement techniques such as optical tweezers and scissors, gives a very powerful tool for unraveling the intricacies of mechanobiology enabling measurement of forces, torques and displacements at play. We review the field of some light based studies of mechanobiology and optical detection of signal transduction ranging from optical micromanipulation-optical tweezers and scissors, advanced fluorescence techniques and optogenentics. In the current perspective paper, we concentrate our efforts on elucidating interesting measurements of forces, torques, positions, viscoelastic properties, and optogenetics inside and outside a cell attained when using structured light in combination with optical tweezers and scissors. We give perspective on the field concentrating on the use of structured light in imaging in combination with tweezers and scissors pointing out how novel developments in quantum imaging in combination with tweezers and scissors can bring to this fast growing field.
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Affiliation(s)
- Alexander
B. Stilgoe
- School of
Mathematics and Physics, The University
of Queensland, Brisbane, 4074, Australia
- ARC
CoE for Engineered Quantum Systems, The
University of Queensland, Brisbane, 4074, Australia
- ARC
CoE in Quantum Biotechnology, The University
of Queensland, 4074, Brisbane, Australia
| | - Itia A. Favre-Bulle
- School of
Mathematics and Physics, The University
of Queensland, Brisbane, 4074, Australia
- Queensland
Brain Institute, The University of Queensland, Brisbane, 4074, Australia
| | - Mark L. Watson
- School of
Mathematics and Physics, The University
of Queensland, Brisbane, 4074, Australia
- ARC
CoE for Engineered Quantum Systems, The
University of Queensland, Brisbane, 4074, Australia
| | - Veronica Gomez-Godinez
- Institute
of Engineering and Medicine, University
of California San Diego, San Diego, California 92093, United States
| | - Michael W. Berns
- Institute
of Engineering and Medicine, University
of California San Diego, San Diego, California 92093, United States
- Beckman
Laser Institute, University of California
Irvine, Irvine, California 92612, United States
| | - Daryl Preece
- Beckman
Laser Institute, University of California
Irvine, Irvine, California 92612, United States
| | - Halina Rubinsztein-Dunlop
- School of
Mathematics and Physics, The University
of Queensland, Brisbane, 4074, Australia
- ARC
CoE for Engineered Quantum Systems, The
University of Queensland, Brisbane, 4074, Australia
- ARC
CoE in Quantum Biotechnology, The University
of Queensland, 4074, Brisbane, Australia
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33
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Feinstein MD, Almeida E. Hybridization of graphene-gold plasmons for active control of mid-infrared radiation. Sci Rep 2024; 14:6733. [PMID: 38509246 PMCID: PMC10954650 DOI: 10.1038/s41598-024-57216-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Accepted: 03/15/2024] [Indexed: 03/22/2024] Open
Abstract
Many applications in environmental and biological sensing, standoff detection, and astronomy rely on devices that operate in the mid-infrared range, where active devices can play a critical role in advancing discovery and innovation. Nanostructured graphene has been proposed for active miniaturized mid-infrared devices via excitation of tunable surface plasmons, but typically present low efficiencies due to weak coupling with free-space radiation and plasmon damping. Here we present a strategy to enhance the light-graphene coupling efficiency, in which graphene plasmons couple with gold localized plasmons, creating novel hybridized plasmonic modes. We demonstrate a metasurface in which hybrid plasmons are excited with transmission modulation rates of 17% under moderate doping (0.35 eV) and in ambient conditions. We also evaluate the metasurface as a mid-infrared modulator, measuring switching speeds of up to 16 kHz. Finally, we propose a scheme in which we can excite strongly coupled gold-graphene gap plasmons in the thermal radiation range, with applications to nonlinear optics, slow light, and sensing.
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Affiliation(s)
- Matthew D Feinstein
- Department of Physics, Queens College, City University of New York, Flushing, NY, 11367, USA
- The Graduate Center of the City University of New York, New York, NY, 10016, USA
| | - Euclides Almeida
- Department of Physics, Queens College, City University of New York, Flushing, NY, 11367, USA.
- The Graduate Center of the City University of New York, New York, NY, 10016, USA.
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34
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Sekh T, Cherniukh I, Kobiyama E, Sheehan TJ, Manoli A, Zhu C, Athanasiou M, Sergides M, Ortikova O, Rossell MD, Bertolotti F, Guagliardi A, Masciocchi N, Erni R, Othonos A, Itskos G, Tisdale WA, Stöferle T, Rainò G, Bodnarchuk MI, Kovalenko MV. All-Perovskite Multicomponent Nanocrystal Superlattices. ACS Nano 2024; 18:8423-8436. [PMID: 38446635 PMCID: PMC10958606 DOI: 10.1021/acsnano.3c13062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2023] [Revised: 02/16/2024] [Accepted: 02/22/2024] [Indexed: 03/08/2024]
Abstract
Nanocrystal superlattices (NC SLs) have long been sought as promising metamaterials, with nanoscale-engineered properties arising from collective and synergistic effects among the constituent building blocks. Lead halide perovskite (LHP) NCs come across as outstanding candidates for SL design, as they demonstrate collective light emission, known as superfluorescence, in single- and multicomponent SLs. Thus far, LHP NCs have only been assembled in single-component SLs or coassembled with dielectric NC building blocks acting solely as spacers between luminescent NCs. Here, we report the formation of multicomponent LHP NC-only SLs, i.e., using only CsPbBr3 NCs of different sizes as building blocks. The structural diversity of the obtained SLs encompasses the ABO6, ABO3, and NaCl structure types, all of which contain orientationally and positionally locked NCs. For the selected model system, the ABO6-type SL, we observed efficient NC coupling and Förster-like energy transfer from strongly confined 5.3 nm CsPbBr3 NCs to weakly confined 17.6 nm CsPbBr3 NCs, along with characteristic superfluorescence features at cryogenic temperatures. Spatiotemporal exciton dynamics measurements reveal that binary SLs exhibit enhanced exciton diffusivity compared to single-component NC assemblies across the entire temperature range (from 5 to 298 K). The observed coherent and incoherent NC coupling and controllable excitonic transport within the solid NC SLs hold promise for applications in quantum optoelectronic devices.
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Affiliation(s)
- Taras
V. Sekh
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa−Swiss
Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - Ihor Cherniukh
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa−Swiss
Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | | | - Thomas J. Sheehan
- Department
of Chemical Engineering, Massachusetts Institute
of Technology, Cambridge, Massachusetts 02139, United States
| | - Andreas Manoli
- Experimental
Condensed Matter Physics Laboratory, Department of Physics, University of Cyprus, 1678 Nicosia, Cyprus
| | - Chenglian Zhu
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa−Swiss
Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - Modestos Athanasiou
- Experimental
Condensed Matter Physics Laboratory, Department of Physics, University of Cyprus, 1678 Nicosia, Cyprus
| | - Marios Sergides
- Laboratory
of Ultrafast Science, Department of Physics, University of Cyprus, Nicosia 1678, Cyprus
| | - Oleksandra Ortikova
- Electron
Microscopy Center, Empa−Swiss Federal
Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
| | - Marta D. Rossell
- Electron
Microscopy Center, Empa−Swiss Federal
Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
| | - Federica Bertolotti
- Department
of Science and High Technology and To.Sca.Lab, University of Insubria, via Valleggio 11, 22100 Como, Italy
| | - Antonietta Guagliardi
- Istituto
di Cristallografia and To.Sca.Lab, Consiglio Nazionale delle Ricerche, via Valleggio 11, 22100 Como, Italy
| | - Norberto Masciocchi
- Department
of Science and High Technology and To.Sca.Lab, University of Insubria, via Valleggio 11, 22100 Como, Italy
| | - Rolf Erni
- Electron
Microscopy Center, Empa−Swiss Federal
Laboratories for Materials Science and Technology, CH-8600 Dübendorf, Switzerland
| | - Andreas Othonos
- Laboratory
of Ultrafast Science, Department of Physics, University of Cyprus, Nicosia 1678, Cyprus
| | - Grigorios Itskos
- Experimental
Condensed Matter Physics Laboratory, Department of Physics, University of Cyprus, 1678 Nicosia, Cyprus
| | - William A. Tisdale
- Department
of Chemical Engineering, Massachusetts Institute
of Technology, Cambridge, Massachusetts 02139, United States
| | - Thilo Stöferle
- IBM
Research Europe−Zürich, Rüschlikon CH-8803, Switzerland
| | - Gabriele Rainò
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa−Swiss
Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - Maryna I. Bodnarchuk
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa−Swiss
Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
| | - Maksym V. Kovalenko
- Institute
of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
- Laboratory
for Thin Films and Photovoltaics, Empa−Swiss
Federal Laboratories for Materials Science and Technology, 8600 Dübendorf, Switzerland
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35
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Dantus M. Tracking Molecular Fragmentation in Electron-Ionization Mass Spectrometry with Ultrafast Time Resolution. Acc Chem Res 2024; 57:845-854. [PMID: 38366970 PMCID: PMC10956387 DOI: 10.1021/acs.accounts.3c00713] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Revised: 01/24/2024] [Accepted: 01/26/2024] [Indexed: 02/19/2024]
Abstract
ConspectusMass spectrometry is a powerful analytical method capable of identifying compounds given a minute amount of material. The fragmentation pattern that results following molecular activation serves as a fingerprint that can be matched to a database compound for identification. Over the past half century, studies have addressed and, in many cases, named the chemical reactions that lead to some of the principal fragment ions. Theories have been developed to predict the observed fragmentation patterns, many of which assume that energy redistributes prior to dissociation. However, the existence of rearrangements and nonergodic processes complicates the prediction of fragmentation patterns and the identification of compounds that have yet to be entered into a curated database. To date, very few studies have addressed the time-dependent nature of the fragmentation of radical cations and, in particular, processes occurring with picosecond or shorter time scales where one expects to find nonergodic reactions.This Account focuses on a novel approach that enables tracking of molecular fragmentation in electron-ionization mass spectrometry with ultrafast time resolution. The two challenges that have prevented the time-resolved studies following electron ionization are the random impact parameter and moment of ionization of each molecule. In addition, medium-sized molecules can produce fragmentation patterns with tens if not hundreds of product ions. Spectroscopically interrogating all of these ions as a function of time is another major challenge. We describe strong field disruptive probing, a method that ionizes molecules on a femtosecond time scale and allows us to track in time the formation of all fragment ions simultaneously.Molecular fragmentation following ionization can occur on a very wide range of time scales. Metastable ions can survive from nanoseconds to microseconds; reactions that depend on vibrational energy redistribution can take picoseconds to nanoseconds; and direct dissociation processes and some rearrangements can take place in femtoseconds to picoseconds. All of these processes depend on the dynamics that occur during attoseconds and femtoseconds following the ionization process. Following a discussion of these time scales, we provide three examples of fragmentations that have been studied with femtosecond time resolution. Each of these examples include unforeseen reaction dynamics that involve a nonergodic process, highlighting the importance of time resolution in mass spectrometry. Finally, we explore future challenges and unresolved questions in mass spectrometry and, more broadly, in the domain of electron-initiated chemical reactions.
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Affiliation(s)
- Marcos Dantus
- Department
of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
- Department
of Physics and Astronomy, Michigan State
University, East Lansing, Michigan 48824, United States
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36
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Wang H, Chen L, Rutherford A, Zhou H, Xie W. Long-Range Structural Order in a Hidden Phase of Ruddlesden-Popper Bilayer Nickelate La 3Ni 2O 7. Inorg Chem 2024; 63:5020-5026. [PMID: 38440856 PMCID: PMC10951943 DOI: 10.1021/acs.inorgchem.3c04474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2023] [Revised: 02/23/2024] [Accepted: 02/23/2024] [Indexed: 03/06/2024]
Abstract
The recent discovery of superconductivity in the Ruddlesden-Popper bilayer nickelate, specifically La3Ni2O7, has generated significant interest in the exploration of high-temperature superconductivity within this material family. In this study, we present the crystallographic and electrical resistivity properties of two distinct Ruddlesden-Popper nickelates: the bilayer La3Ni2O7 (referred to as 2222-phase) and a previously uncharacterized phase, La3Ni2O7 (1313-phase). The 2222-phase is characterized by a pseudo F-centered orthorhombic lattice, featuring bilayer perovskite [LaNiO3] layers interspaced by rock salt [LaO] layers, forming a repeated ...2222... sequence. Intriguingly, the 1313-phase, which displays semiconducting properties, crystallizes in the Cmmm space group and exhibits a pronounced predilection for a C-centered orthorhombic lattice. Within this structure, the perovskite [LaNiO3] layers exhibit a distinctive long-range ordered arrangement, alternating between single- and trilayer configurations, resulting in a ...1313... sequence. This report contributes to novel insights into the crystallography and the structure-property relationship of Ruddlesden-Popper nickelates, paving the way for further investigations into their unique physical properties.
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Affiliation(s)
- Haozhe Wang
- Department
of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
| | - Long Chen
- Department
of Physics and Astronomy, University of
Tennessee, Knoxville, Tennessee 37996, United States
| | - Aya Rutherford
- Department
of Physics and Astronomy, University of
Tennessee, Knoxville, Tennessee 37996, United States
| | - Haidong Zhou
- Department
of Physics and Astronomy, University of
Tennessee, Knoxville, Tennessee 37996, United States
| | - Weiwei Xie
- Department
of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
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37
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Park T, Stokowski H, Ansari V, Gyger S, Multani KKS, Celik OT, Hwang AY, Dean DJ, Mayor F, McKenna TP, Fejer MM, Safavi-Naeini A. Single-mode squeezed-light generation and tomography with an integrated optical parametric oscillator. Sci Adv 2024; 10:eadl1814. [PMID: 38478618 PMCID: PMC10936947 DOI: 10.1126/sciadv.adl1814] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Accepted: 02/08/2024] [Indexed: 03/17/2024]
Abstract
Quantum optical technologies promise advances in sensing, computing, and communication. A key resource is squeezed light, where quantum noise is redistributed between optical quadratures. We introduce a monolithic, chip-scale platform that exploits the χ(2) nonlinearity of a thin-film lithium niobate (TFLN) resonator device to efficiently generate squeezed states of light. Our system integrates all essential components-except for the laser and two detectors-on a single chip with an area of one square centimeter, reducing the size, operational complexity, and power consumption associated with conventional setups. Using the balanced homodyne measurement subsystem that we implemented on the same chip, we measure a squeezing of 0.55 decibels and an anti-squeezing of 1.55 decibels. We use 20 milliwatts of input power to generate the parametric oscillator pump field by using second harmonic generation on the same chip. Our work represents a step toward compact and efficient quantum optical systems posed to leverage the rapid advances in integrated nonlinear and quantum photonics.
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Affiliation(s)
- Taewon Park
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
- Department of Electrical Engineering, Stanford University, Stanford, CA 94305, USA
| | - Hubert Stokowski
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
| | - Vahid Ansari
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
| | - Samuel Gyger
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
| | - Kevin K. S. Multani
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
- Department of Physics, Stanford University, Stanford, CA 94305, USA
| | - Oguz Tolga Celik
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
- Department of Electrical Engineering, Stanford University, Stanford, CA 94305, USA
| | - Alexander Y. Hwang
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
| | - Devin J. Dean
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
| | - Felix Mayor
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
| | - Timothy P. McKenna
- Physics and Informatics Laboratories, NTT Research Inc., Sunnyvale, CA 94085, USA
| | - Martin M. Fejer
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
| | - Amir Safavi-Naeini
- Department of Applied Physics and Ginzton Laboratory, Stanford University, Stanford, CA 94305, USA
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38
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Xiang B, Xiong W. Molecular Polaritons for Chemistry, Photonics and Quantum Technologies. Chem Rev 2024; 124:2512-2552. [PMID: 38416701 PMCID: PMC10941193 DOI: 10.1021/acs.chemrev.3c00662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2023] [Revised: 01/22/2024] [Accepted: 02/08/2024] [Indexed: 03/01/2024]
Abstract
Molecular polaritons are quasiparticles resulting from the hybridization between molecular and photonic modes. These composite entities, bearing characteristics inherited from both constituents, exhibit modified energy levels and wave functions, thereby capturing the attention of chemists in the past decade. The potential to modify chemical reactions has spurred many investigations, alongside efforts to enhance and manipulate optical responses for photonic and quantum applications. This Review centers on the experimental advances in this burgeoning field. Commencing with an introduction of the fundamentals, including theoretical foundations and various cavity architectures, we discuss outcomes of polariton-modified chemical reactions. Furthermore, we navigate through the ongoing debates and uncertainties surrounding the underpinning mechanism of this innovative method of controlling chemistry. Emphasis is placed on gaining a comprehensive understanding of the energy dynamics of molecular polaritons, in particular, vibrational molecular polaritons─a pivotal facet in steering chemical reactions. Additionally, we discuss the unique capability of coherent two-dimensional spectroscopy to dissect polariton and dark mode dynamics, offering insights into the critical components within the cavity that alter chemical reactions. We further expand to the potential utility of molecular polaritons in quantum applications as well as precise manipulation of molecular and photonic polarizations, notably in the context of chiral phenomena. This discussion aspires to ignite deeper curiosity and engagement in revealing the physics underpinning polariton-modified molecular properties, and a broad fascination with harnessing photonic environments to control chemistry.
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Affiliation(s)
- Bo Xiang
- Department
of Chemistry, School of Science and Research Center for Industries
of the Future, Westlake University, Hangzhou, Zhejiang 310030, China
| | - Wei Xiong
- Department
of Chemistry and Biochemistry, University
of California, San Diego, California 92126, United States
- Materials
Science and Engineering Program, University
of California, San Diego, California 92126, United States
- Department
of Electrical and Computer Engineering, University of California, San
Diego, California 92126, United States
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39
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Wanasinghe S, Gjoni A, Burson W, Majeski C, Zaslona B, Rury AS. Motional Narrowing through Photonic Exchange: Rational Suppression of Excitonic Disorder from Molecular Cavity Polariton Formation. J Phys Chem Lett 2024; 15:2405-2418. [PMID: 38394364 PMCID: PMC10926155 DOI: 10.1021/acs.jpclett.3c03217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 02/02/2024] [Accepted: 02/05/2024] [Indexed: 02/25/2024]
Abstract
Maximizing the coherence between the constituents of molecular materials remains a crucial goal toward the implementation of these systems into everyday optoelectronic technologies. Here we experimentally assess the ability of strong light-matter coupling in the collective limit to reduce energetic disorder using porphyrin-based chromophores in Fabry-Pérot (FP) microresonator structures. Following characterization of cavity polaritons formed from chemically distinct porphyrin dimers, we find that the peaks corresponding to the lower polariton (LP) state in each sample do not possess widths consistent with conventional theories. We model the behavior of the polariton peak widths effectively using the results of spectroscopic theory. We correlate differences in the suppression of excitonic energetic disorder between our samples with microscopic light-matter interactions and propose that the suppression stems from photonic exchange. Our results demonstrate that cavity polariton formation can suppress disorder and show researchers how to design coherence into hybrid molecular material systems.
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Affiliation(s)
- Sachithra
T. Wanasinghe
- Department
of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
- Materials
Structural Dynamics Laboratory, Wayne State
University, Detroit, Michigan 48202, United
States
| | - Adelina Gjoni
- Department
of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
- Materials
Structural Dynamics Laboratory, Wayne State
University, Detroit, Michigan 48202, United
States
| | - Wade Burson
- Department
of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - Caris Majeski
- Department
of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - Bradley Zaslona
- Department
of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - Aaron S. Rury
- Department
of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
- Materials
Structural Dynamics Laboratory, Wayne State
University, Detroit, Michigan 48202, United
States
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40
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Luo Y, Patel DK, Li Z, Hu Y, Luo H, Yao L, Majidi C. Intrinsically Multistable Soft Actuator Driven by Mixed-Mode Snap-Through Instabilities. Adv Sci (Weinh) 2024:e2307391. [PMID: 38447200 DOI: 10.1002/advs.202307391] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Revised: 12/07/2023] [Indexed: 03/08/2024]
Abstract
Actuators utilizing snap-through instabilities are widely investigated for high-performance fast actuators and shape reconfigurable structures owing to their rapid response and limited reliance on continuous energy input. However, prevailing approaches typically involve a combination of multiple bistable actuator units and achieving multistability within a single actuator unit still remains an open challenge. Here, a soft actuator is presented that uses shape memory alloy (SMA) and mixed-mode elastic instabilities to achieve intrinsically multistable shape reconfiguration. The multistable actuator unit consists of six stable states, including two pure bending states and four bend-twist states. The actuator is composed of a pre-stretched elastic membrane placed between two elastomeric frames embedded with SMA coils. By controlling the sequence and duration of SMA activation, the actuator is capable of rapid transition between all six stable states within hundreds of milliseconds. Principles of energy minimization are used to identify actuation sequences for various types of stable state transitions. Bending and twisting angles corresponding to various prestretch ratios are recorded based on parameterizations of the actuator's geometry. To demonstrate its application in practical conditions, the multistable actuator is used to perform visual inspection in a confined space, light source tracking during photovoltaic energy harvesting, and agile crawling.
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Affiliation(s)
- Yichi Luo
- Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Dinesh K Patel
- Human-Computer Interaction Institute, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Zefang Li
- Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Yafeng Hu
- Department of Materials Science and Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Hao Luo
- Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Lining Yao
- Human-Computer Interaction Institute, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Carmel Majidi
- Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
- Department of Materials Science and Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
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41
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Song X, Zare RN. The power of microdroplet photochemistry. Chem Sci 2024; 15:3670-3672. [PMID: 38454998 PMCID: PMC10915808 DOI: 10.1039/d4sc00056k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Accepted: 02/01/2024] [Indexed: 03/09/2024] Open
Abstract
This study presents compelling evidence demonstrating that irradiation of the air-solution interface, whether achieved through the spraying of microdroplets into the air or by bubbling air through a solution, significantly accelerates the rate of photochemical reactions by orders of magnitude compared to identical reaction conditions in bulk solutions. We propose this approach as a novel and versatile method for harnessing solar energy in chemical transformations.
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Affiliation(s)
- Xiaowei Song
- Department of Chemistry, Stanford University Stanford California 94305 USA
| | - Richard N Zare
- Department of Chemistry, Stanford University Stanford California 94305 USA
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42
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Yang J, Neary MC, Diao T. ProPhos: A Ligand for Promoting Nickel-Catalyzed Suzuki-Miyaura Coupling Inspired by Mechanistic Insights into Transmetalation. J Am Chem Soc 2024; 146:6360-6368. [PMID: 38391156 PMCID: PMC10921396 DOI: 10.1021/jacs.4c00370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2024] [Revised: 02/05/2024] [Accepted: 02/07/2024] [Indexed: 02/24/2024]
Abstract
Nickel-catalyzed Suzuki-Miyaura coupling (Ni-SMC) offers the potential to reduce the cost of pharmaceutical process synthesis. However, its application has been restricted by challenges such as slow reaction rates, high catalyst loading, and a limited scope of heterocycles. Despite recent investigations, the mechanism of transmetalation in Ni-SMC, often viewed as the turnover-limiting step, remains insufficiently understood. We elucidate the "Ni-oxo" transmetalation pathway, applying PPh2Me as the ligand, and identify the formation of a nickel-oxo intermediate as the turnover-limiting step. Building on this insight, we develop a scaffolding ligand, ProPhos, featuring a pendant hydroxyl group connected to the phosphine via a linker. The design preorganizes both the nucleophile and the nickel catalyst, thereby facilitating transmetalation. This catalyst exhibits fast kinetics and robust activity across a wide range of heteroarenes, with a catalyst loading of 0.5-3 mol %. For arene substrates, the catalyst loading can be further reduced to 0.1 mol %.
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Affiliation(s)
- Jin Yang
- Department
of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Michelle C. Neary
- Department
of Chemistry, CUNY − Hunter College, 695 Park Ave, New York, New York 10065, United States
| | - Tianning Diao
- Department
of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
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43
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Du Z, Luong HM, Sabury S, Jones AL, Zhu Z, Panoy P, Chae S, Yi A, Kim HJ, Xiao S, Brus VV, Manjunatha Reddy GN, Reynolds JR, Nguyen TQ. High-Performance Wearable Organic Photodetectors by Molecular Design and Green Solvent Processing for Pulse Oximetry and Photoplethysmography. Adv Mater 2024; 36:e2310478. [PMID: 38054854 DOI: 10.1002/adma.202310478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 11/27/2023] [Indexed: 12/07/2023]
Abstract
White-light detection from the visible to the near-infrared region is central to many applications such as high-speed cameras, autonomous vehicles, and wearable electronics. While organic photodetectors (OPDs) are being developed for such applications, several challenges must be overcome to produce scalable high-detectivity OPDs. This includes issues associated with low responsivity, narrow absorption range, and environmentally friendly device fabrication. Here, an OPD system processed from 2-methyltetrahydrofuran (2-MeTHF) sets a record in light detectivity, which is also comparable with commercially available silicon-based photodiodes is reported. The newly designed OPD is employed in wearable devices to monitor heart rate and blood oxygen saturation using a flexible OPD-based finger pulse oximeter. In achieving this, a framework for a detailed understanding of the structure-processing-property relationship in these OPDs is also developed. The bulk heterojunction (BHJ) thin films processed from 2-MeTHF are characterized at different length scales with advanced techniques. The BHJ morphology exhibits optimal intermixing and phase separation of donor and acceptor moieties, which facilitates the charge generation and collection process. Benefitting from high charge carrier mobilities and a low shunt leakage current, the newly developed OPD exhibits a specific detectivity of above 1012 Jones over 400-900 nm, which is higher than those of reference devices processed from chlorobenzene and ortho-xylene.
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Affiliation(s)
- Zhifang Du
- Center for Polymers and Organic Solids, Department of Chemistry and Biochemistry, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA
| | - Hoang Mai Luong
- Center for Polymers and Organic Solids, Department of Chemistry and Biochemistry, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA
| | - Sina Sabury
- School of Chemistry and Biochemistry, School of Materials Science and Engineering, Center for Organic Photonics and Electronics, Georgia Tech Polymer Network, Georgia Institute of Technology, Atlanta, GA, 30332, USA
| | - Austin L Jones
- School of Chemistry and Biochemistry, School of Materials Science and Engineering, Center for Organic Photonics and Electronics, Georgia Tech Polymer Network, Georgia Institute of Technology, Atlanta, GA, 30332, USA
| | - Ziyue Zhu
- Center for Polymers and Organic Solids, Department of Chemistry and Biochemistry, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA
| | - Patchareepond Panoy
- Center for Polymers and Organic Solids, Department of Chemistry and Biochemistry, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA
| | - Sangmin Chae
- Center for Polymers and Organic Solids, Department of Chemistry and Biochemistry, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA
| | - Ahra Yi
- Department of Organic Materials Science and Engineering, School of Chemical Engineering, Pusan National University, Busan, 46241, Republic of Korea
| | - Hyo Jung Kim
- Department of Organic Materials Science and Engineering, School of Chemical Engineering, Pusan National University, Busan, 46241, Republic of Korea
| | - Steven Xiao
- 1-Material Inc, 2290 Chemin St-Francois, Dorval, Quebec, H9P 1K2, Canada
| | - Viktor V Brus
- Department of Physics, School of Sciences and Humanities, Nazarbayev University, Nur-Sultan City, 010000, Republic of Kazakhstan
| | - G N Manjunatha Reddy
- University of Lille, CNRS, Centrale Lille Institut, Univ. Artois, UMR 8181, Unité de Catalyse et Chimie du Solide, Lille, F-59000, France
| | - John R Reynolds
- School of Chemistry and Biochemistry, School of Materials Science and Engineering, Center for Organic Photonics and Electronics, Georgia Tech Polymer Network, Georgia Institute of Technology, Atlanta, GA, 30332, USA
| | - Thuc-Quyen Nguyen
- Center for Polymers and Organic Solids, Department of Chemistry and Biochemistry, University of California at Santa Barbara, Santa Barbara, CA, 93106, USA
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44
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Bloom BP, Paltiel Y, Naaman R, Waldeck DH. Chiral Induced Spin Selectivity. Chem Rev 2024; 124:1950-1991. [PMID: 38364021 PMCID: PMC10906005 DOI: 10.1021/acs.chemrev.3c00661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Revised: 01/16/2024] [Accepted: 01/23/2024] [Indexed: 02/18/2024]
Abstract
Since the initial landmark study on the chiral induced spin selectivity (CISS) effect in 1999, considerable experimental and theoretical efforts have been made to understand the physical underpinnings and mechanistic features of this interesting phenomenon. As first formulated, the CISS effect refers to the innate ability of chiral materials to act as spin filters for electron transport; however, more recent experiments demonstrate that displacement currents arising from charge polarization of chiral molecules lead to spin polarization without the need for net charge flow. With its identification of a fundamental connection between chiral symmetry and electron spin in molecules and materials, CISS promises profound and ubiquitous implications for existing technologies and new approaches to answering age old questions, such as the homochiral nature of life. This review begins with a discussion of the different methods for measuring CISS and then provides a comprehensive overview of molecules and materials known to exhibit CISS-based phenomena before proceeding to identify structure-property relations and to delineate the leading theoretical models for the CISS effect. Next, it identifies some implications of CISS in physics, chemistry, and biology. The discussion ends with a critical assessment of the CISS field and some comments on its future outlook.
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Affiliation(s)
- Brian P. Bloom
- Department
of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States
| | - Yossi Paltiel
- Applied
Physics Department and Center for Nano-Science and Nano-Technology, The Hebrew University of Jerusalem, Jerusalem 9190401, Israel
| | - Ron Naaman
- Department
of Chemical and Biological Physics, Weizmann
Institute, Rehovot 76100, Israel
| | - David H. Waldeck
- Department
of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States
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45
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Richardson GM, Evans MJ, Rajeshkumar T, McCone JAJ, Cameron SA, Maron L, Jones C, Anker MD. Synthesis and Reactivity of Discrete Europium(II) Hydride Complexes. Chemistry 2024:e202400681. [PMID: 38417144 DOI: 10.1002/chem.202400681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Revised: 02/27/2024] [Accepted: 02/28/2024] [Indexed: 03/01/2024]
Abstract
The bulky β-diketiminate ligand frameworks [BDIDCHP]- and [BDIDipp/Ar]- (BDI=[HC{C(Me)2N-Dipp/Ar}2]- (Dipp=2,6-diisopropylphenyl (Dipp); Ar=2,6-dicyclohexylphyenyl (DCHP) or 2,4,6-tricyclohexylphyenyl (TCHP)) have been developed for the kinetic stabilisation of the first europium (II) hydride complexes, [(BDIDCHP)Eu(μ-H)]2, [(BDIDipp/DCHP)Eu(μ-H)]2 and [(BDIDipp/TCHP)Eu(μ-H)]2, respectively. These complexes represent the first step beyond the current lanthanide(II) hydrides that are all based on ytterbium. Tuning the steric profile of β-diketiminate ligands from a symmetrical to unsymmetrical disposition, enhanced solubility and stability in the solution-state. This provides the first opportunity to study the structure and bonding of these novel Eu(II) hydride complexes crystallographically, spectroscopically and computationally, with their preliminary reactivity investigated.
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Affiliation(s)
- Georgia M Richardson
- School of Chemical and Physical Sciences/Ferrier Institute, Victoria University of Wellington, PO Box 600, Wellington, 6012, New Zealand
| | - Matthew J Evans
- School of Chemistry, PO Box 23, Monash University, VIC, 3800, Australia
| | - Thayalan Rajeshkumar
- Université de Toulouse et CNRS, INSA UPS, UMR5215, LPCNO, 135 Avenue de Rangueil, 31077, Toulouse, France
| | - Jordan A J McCone
- School of Chemical and Physical Sciences/Ferrier Institute, Victoria University of Wellington, PO Box 600, Wellington, 6012, New Zealand
| | - Scott A Cameron
- School of Chemical and Physical Sciences/Ferrier Institute, Victoria University of Wellington, PO Box 600, Wellington, 6012, New Zealand
| | - Laurent Maron
- Université de Toulouse et CNRS, INSA UPS, UMR5215, LPCNO, 135 Avenue de Rangueil, 31077, Toulouse, France
| | - Cameron Jones
- School of Chemistry, PO Box 23, Monash University, VIC, 3800, Australia
| | - Mathew D Anker
- School of Chemical and Physical Sciences/Ferrier Institute, Victoria University of Wellington, PO Box 600, Wellington, 6012, New Zealand
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46
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Gajapathy H, Bandaranayake S, Hruska E, Vadakkayil A, Bloom BP, Londo S, McClellan J, Guo J, Russell D, de Groot FMF, Yang F, Waldeck DH, Schultze M, Baker LR. Spin polarized electron dynamics enhance water splitting efficiency by yttrium iron garnet photoanodes: a new platform for spin selective photocatalysis. Chem Sci 2024; 15:3300-3310. [PMID: 38425509 PMCID: PMC10901523 DOI: 10.1039/d3sc03016d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Accepted: 01/16/2024] [Indexed: 03/02/2024] Open
Abstract
This work presents a spectroscopic and photocatalytic comparison of water splitting using yttrium iron garnet (Y3Fe5O12, YIG) and hematite (α-Fe2O3) photoanodes. Despite similar electronic structures, YIG significantly outperforms widely studied hematite, displaying more than an order of magnitude increase in photocurrent density. Probing the charge and spin dynamics by ultrafast, surface-sensitive XUV spectroscopy reveals that the enhanced performance arises from (1) reduced polaron formation in YIG compared to hematite and (2) an intrinsic spin polarization of catalytic photocurrents in YIG. Ultrafast XUV measurements show a reduction in the formation of surface electron polarons compared to hematite due to site-dependent electron-phonon coupling. This leads to spin polarized photocurrents in YIG where efficient charge separation occurs on the Td sub-lattice compared to fast trapping and electron/hole pair recombination on the Oh sub-lattice. These lattice-dependent dynamics result in a long-lived spin aligned hole population at the YIG surface, which is directly observed using XUV magnetic circular dichroism. Comparison of the Fe M2,3 and O L1-edges show that spin aligned holes are hybridized between O 2p and Fe 3d valence band states, and these holes are responsible for highly efficient, spin selective water oxidation by YIG. Together, these results point to YIG as a new platform for highly efficient, spin selective photocatalysis.
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Affiliation(s)
- Harshad Gajapathy
- Department of Chemistry and Biochemistry, The Ohio State University Columbus Ohio 43210 USA
| | - Savini Bandaranayake
- Department of Chemistry and Biochemistry, The Ohio State University Columbus Ohio 43210 USA
| | - Emily Hruska
- Department of Chemistry and Biochemistry, The Ohio State University Columbus Ohio 43210 USA
| | - Aravind Vadakkayil
- Department of Chemistry, University of Pittsburgh 15260 Pittsburgh Pennsylvania USA
| | - Brian P Bloom
- Department of Chemistry, University of Pittsburgh 15260 Pittsburgh Pennsylvania USA
| | - Stephen Londo
- Department of Chemistry and Biochemistry, The Ohio State University Columbus Ohio 43210 USA
| | - Jackson McClellan
- Department of Chemistry and Biochemistry, The Ohio State University Columbus Ohio 43210 USA
| | - Jason Guo
- Department of Physics, The Ohio State University Columbus Ohio 43210 USA
| | - Daniel Russell
- Department of Physics, The Ohio State University Columbus Ohio 43210 USA
| | - Frank M F de Groot
- Inorganic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Utrecht University 3584CG Utrecht The Netherlands
| | - Fengyuan Yang
- Department of Physics, The Ohio State University Columbus Ohio 43210 USA
| | - David H Waldeck
- Department of Chemistry, University of Pittsburgh 15260 Pittsburgh Pennsylvania USA
| | - Martin Schultze
- Institute of Experimental Physics, Graz University of Technology Petersgasse 16 Graz 8010 Austria
| | - L Robert Baker
- Department of Chemistry and Biochemistry, The Ohio State University Columbus Ohio 43210 USA
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47
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Valenzuela-Ibaceta F, Torres-Olea N, Ramos-Zúñiga J, Dietz-Vargas C, Navarro CA, Pérez-Donoso JM. Minicells as an Escherichia coli mechanism for the accumulation and disposal of fluorescent cadmium sulphide nanoparticles. J Nanobiotechnology 2024; 22:78. [PMID: 38414055 PMCID: PMC10900627 DOI: 10.1186/s12951-024-02348-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Accepted: 02/18/2024] [Indexed: 02/29/2024] Open
Abstract
BACKGROUND Bacterial biosynthesis of fluorescent nanoparticles or quantum dots (QDs) has emerged as a unique mechanism for heavy metal tolerance. However, the physiological pathways governing the removal of QDs from bacterial cells remains elusive. This study investigates the role of minicells, previously identified as a means of eliminating damaged proteins and enhancing bacterial resistance to stress. Building on our prior work, which unveiled the formation of minicells during cadmium QDs biosynthesis in Escherichia coli, we hypothesize that minicells serve as a mechanism for the accumulation and detoxification of QDs in bacterial cells. RESULTS Intracellular biosynthesis of CdS QDs was performed in E. coli mutants ΔminC and ΔminCDE, known for their minicell-producing capabilities. Fluorescence microscopy analysis demonstrated that the generated minicells exhibited fluorescence emission, indicative of QD loading. Transmission electron microscopy (TEM) confirmed the presence of nanoparticles in minicells, while energy dispersive spectroscopy (EDS) revealed the coexistence of cadmium and sulfur. Cadmium quantification through flame atomic absorption spectrometry (FAAS) demonstrated that minicells accumulated a higher cadmium content compared to rod cells. Moreover, fluorescence intensity analysis suggested that minicells accumulated a greater quantity of fluorescent nanoparticles, underscoring their efficacy in QD removal. Biosynthesis dynamics in minicell-producing strains indicated that biosynthesized QDs maintained high fluorescence intensity even during prolonged biosynthesis times, suggesting continuous QD clearance in minicells. CONCLUSIONS These findings support a model wherein E. coli utilizes minicells for the accumulation and removal of nanoparticles, highlighting their physiological role in eliminating harmful elements and maintaining cellular fitness. Additionally, this biosynthesis system presents an opportunity for generating minicell-coated nanoparticles with enhanced biocompatibility for diverse applications.
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Affiliation(s)
- Felipe Valenzuela-Ibaceta
- BioNanotechnology and Microbiology Laboratory, Center for Bioinformatics and Integrative Biology (CBIB), Facultad de Ciencias de la Vida, Universidad Andrés Bello, Av. República # 330, Santiago, Chile
| | - Nicolás Torres-Olea
- BioNanotechnology and Microbiology Laboratory, Center for Bioinformatics and Integrative Biology (CBIB), Facultad de Ciencias de la Vida, Universidad Andrés Bello, Av. República # 330, Santiago, Chile
| | - Javiera Ramos-Zúñiga
- BioNanotechnology and Microbiology Laboratory, Center for Bioinformatics and Integrative Biology (CBIB), Facultad de Ciencias de la Vida, Universidad Andrés Bello, Av. República # 330, Santiago, Chile
| | - Claudio Dietz-Vargas
- BioNanotechnology and Microbiology Laboratory, Center for Bioinformatics and Integrative Biology (CBIB), Facultad de Ciencias de la Vida, Universidad Andrés Bello, Av. República # 330, Santiago, Chile
| | - Claudio A Navarro
- BioNanotechnology and Microbiology Laboratory, Center for Bioinformatics and Integrative Biology (CBIB), Facultad de Ciencias de la Vida, Universidad Andrés Bello, Av. República # 330, Santiago, Chile
| | - José M Pérez-Donoso
- BioNanotechnology and Microbiology Laboratory, Center for Bioinformatics and Integrative Biology (CBIB), Facultad de Ciencias de la Vida, Universidad Andrés Bello, Av. República # 330, Santiago, Chile.
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48
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Deetjen ME, Chin DD, Heers AM, Tobalske BW, Lentink D. Small deviations in kinematics and body form dictate muscle performances in the finely tuned avian downstroke. eLife 2024; 12:RP89968. [PMID: 38408118 PMCID: PMC10942624 DOI: 10.7554/elife.89968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/28/2024] Open
Abstract
Avian takeoff requires peak pectoralis muscle power to generate sufficient aerodynamic force during the downstroke. Subsequently, the much smaller supracoracoideus recovers the wing during the upstroke. How the pectoralis work loop is tuned to power flight is unclear. We integrate wingbeat-resolved muscle, kinematic, and aerodynamic recordings in vivo with a new mathematical model to disentangle how the pectoralis muscle overcomes wing inertia and generates aerodynamic force during takeoff in doves. Doves reduce the angle of attack of their wing mid-downstroke to efficiently generate aerodynamic force, resulting in an aerodynamic power dip, that allows transferring excess pectoralis power into tensioning the supracoracoideus tendon to assist the upstroke-improving the pectoralis work loop efficiency simultaneously. Integrating extant bird data, our model shows how the pectoralis of birds with faster wingtip speed need to generate proportionally more power. Finally, birds with disproportionally larger wing inertia need to activate the pectoralis earlier to tune their downstroke.
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Affiliation(s)
- Marc E Deetjen
- Department of Mechanical Engineering, Stanford UniversityPalo AltoUnited States
| | - Diana D Chin
- Department of Mechanical Engineering, Stanford UniversityPalo AltoUnited States
| | - Ashley M Heers
- Department of Mechanical Engineering, Stanford UniversityPalo AltoUnited States
- Department of Biological Sciences, California State UniversityLos AngelesUnited States
| | - Bret W Tobalske
- Division of Biological Sciences, University of MontanaMissoulaUnited States
| | - David Lentink
- Department of Mechanical Engineering, Stanford UniversityPalo AltoUnited States
- Faculty of Science and Engineering, University of GroningenGroningenNetherlands
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49
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Zhang A, Mickelin O, Kileel J, Verbeke EJ, Marshall NF, Gilles MA, Singer A. Moment-based metrics for molecules computable from cryogenic electron microscopy images. Biol Imaging 2024; 4:e3. [PMID: 38516630 PMCID: PMC10951804 DOI: 10.1017/s2633903x24000023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 01/27/2024] [Accepted: 01/30/2024] [Indexed: 03/23/2024]
Abstract
Single-particle cryogenic electron microscopy (cryo-EM) is an imaging technique capable of recovering the high-resolution three-dimensional (3D) structure of biological macromolecules from many noisy and randomly oriented projection images. One notable approach to 3D reconstruction, known as Kam's method, relies on the moments of the two-dimensional (2D) images. Inspired by Kam's method, we introduce a rotationally invariant metric between two molecular structures, which does not require 3D alignment. Further, we introduce a metric between a stack of projection images and a molecular structure, which is invariant to rotations and reflections and does not require performing 3D reconstruction. Additionally, the latter metric does not assume a uniform distribution of viewing angles. We demonstrate the uses of the new metrics on synthetic and experimental datasets, highlighting their ability to measure structural similarity.
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Affiliation(s)
- Andy Zhang
- Program in Applied and Computational Mathematics, Princeton University, Princeton, NJ, USA
| | - Oscar Mickelin
- Program in Applied and Computational Mathematics, Princeton University, Princeton, NJ, USA
| | - Joe Kileel
- Department of Mathematics and Oden Institute, University of Texas at Austin, Austin, TX, USA
| | - Eric J. Verbeke
- Program in Applied and Computational Mathematics, Princeton University, Princeton, NJ, USA
| | | | - Marc Aurèle Gilles
- Program in Applied and Computational Mathematics, Princeton University, Princeton, NJ, USA
| | - Amit Singer
- Program in Applied and Computational Mathematics, Princeton University, Princeton, NJ, USA
- Department of Mathematics, Princeton University, Princeton, NJ, USA
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50
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Johnson P, Gulbrandson AJ, Larm NE, Stachurski CD, Durkin DP, Trulove PC. Accelerated Fabrication of Fiber-Welded Mesoporous Cotton Composites. ACS Omega 2024; 9:8503-8509. [PMID: 38405521 PMCID: PMC10882613 DOI: 10.1021/acsomega.3c09797] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Revised: 01/23/2024] [Accepted: 01/25/2024] [Indexed: 02/27/2024]
Abstract
Natural fiber-welded (NFW) biopolymer composites are rapidly garnering industrial and commercial attention in the textile sector, and a recent disclosure demonstrating the production of mesoporous NFW materials suggests a bright future as sorbents, filters, and nanoparticle scaffolds. A significant roadblock in the mass production of mesoporous NFW composites for research and development is their lengthy preparation time: 24 h of water rinses to remove the ionic liquid (IL) serving as a welding medium and then 72 h of solvent exchanges (polar to nonpolar), followed by oven drying to attain a mesoporous composite. In this work, the rinsing procedure is systematically truncated using the solution conductivity as a yardstick to monitor IL removal. The traditional water immersion rinses are replaced by a flow-through system (i.e., infinite dilution) using a peristaltic pump, reducing the required water rinse time for the maximum removal of IL to 30 min. This procedure also allows for easy in-line monitoring of solution conductivity and reclamation of an expensive welding solvent. Further, the organic solvent exchange is minimized to 10 min per solvent (from 24 h), resulting in a total combined rinse time of 1 h. This process acceleration reduces the overall solvent exposure time from 96 to 1 h, an almost 99% temporal improvement.
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Affiliation(s)
- Peyton
J. Johnson
- Department
of Chemistry, United States Naval Academy, Annapolis, Maryland 21402, United States
| | - Anders J. Gulbrandson
- Department
of Chemistry, United States Naval Academy, Annapolis, Maryland 21402, United States
| | - Nathaniel E. Larm
- Department
of Chemistry, United States Naval Academy, Annapolis, Maryland 21402, United States
| | | | - David P. Durkin
- Department
of Chemistry, United States Naval Academy, Annapolis, Maryland 21402, United States
| | - Paul C. Trulove
- Department
of Chemistry, United States Naval Academy, Annapolis, Maryland 21402, United States
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