Sites of synthesis and processing of ribosomal RNA presurosrs within the nucleolus of Urechis caupo eggs

Relationships between the structural and functional organization of the turtle cell nucleolus

The nucleolus is a multifunctional structure of the eukaryotic cell nucleus. However, its primary role is ribosome formation. Although the factors and mechanisms involved in ribogenesis are well conserved in eukaryotes, two types of nucleoli have been observed under the electron microscope: a tricompartmentalized nucleolus in amniotes and a bicompartmentalized nucleolus in other species. A recent study has also revealed that turtles, although belonging to amniotes, displayed a nucleolus with bipartite organization, suggesting that this reptile group may have carried out a reversion phenomenon during evolution. In this study, we examine in great detail the functional organization of the turtle nucleolus. In liver and spleen cells cultured in vitro, we confirm that the turtle nucleolus is mainly formed by two components: a fibrillar zone surrounded by a granular zone. We further show that the fibrillar zone includes densely-contrasted strands, which are positive after silver-stained Nucleolar Organizer Region (Ag-NOR) staining and DNA labelling. We also reveal that the dense strands condensed into a very compact mass within the fibrillar zone after a treatment with actinomycin D or 5,6-dichlorobenzimidazole riboside. Finally, by using pulse-chase experiments with BrUTP, three-dimensional image reconstructions of confocal optical sections, and electron microscopy analysis of ultrathin sections, we show that the topological and spatial dynamics of rRNA within the nucleolus extend from upstream binding factor (UBF)-positive sites in the fibrillar zone to the granular zone, without ever releasing the positive sites for the UBF. Together, these results seem to clearly indicate that the compartmentalization of the turtle nucleolus into two main components reflects a less orderly organization of ribosome formation.

Assigning functions to nucleolar structures

Nucleoli provide the fascinating possibility of linking morphologically distinct structures such as those seen in the electron microscope with biochemical features of the formation and stepwise maturation of ribosomes. Localization of proteins by immunocytochemistry and of rRNA genes and their transcripts by in situ hybridization has greatly improved our understanding of the structural-functional relationships of the nucleolus. The present review describes some recent results obtained by electron microscopic in situ hybridization and argues that this approach has the potential to correlate each step of the complex pre-rRNA maturation pathway with nucleolar structures. Evidence is accumulating that the nucleolus-specific U3 snRNPs (small nuclear ribonucleoprotein particles) participate in rRNA processing events, similar to the role played by the nucleoplasmic snRNPs in mRNA maturation. The intranucleolar distribution of U3 snRNA is consistent with the view that it is involved in both early and late stages of pre-rRNA processing.

Localization of ribosomal protein S1 in the granular component of the interphase nucleolus and its distribution during mitosis

Using antibodies to various nucleolar and ribosomal proteins, we define, by immunolocalization in situ, the distribution of nucleolar proteins in the different morphological nucleolar subcompartments. In the present study we describe the nucleolar localization of a specific ribosomal protein (S1) by immunofluorescence and immunoelectron microscopy using a monoclonal antibody (RS1-105). In immunoblotting experiments, this antibody reacts specifically with the largest and most acidic protein of the small ribosomal subunit (S1) and shows wide interspecies cross-reactivity from amphibia to man. Beside its localization in cytoplasmic ribosomes, this protein is found to be specifically localized in the granular component of the nucleolus and in distinct granular aggregates scattered over the nucleoplasm. This indicates that ribosomal protein S1, in contrast to reports on other ribosomal proteins, is not bound to nascent pre-rRNA transcripts but attaches to preribosomes at later stages of rRNA processing and maturation. This protein is not detected in the residual nucleolar structures of cells inactive in rRNA synthesis such as amphibian and avian erythrocytes. During mitosis, the nucleolar material containing ribosomal protein S1 undergoes a remarkable transition and shows a distribution distinct from that of several other nucleolar proteins. In prophase, the nucleolus disintegrates and protein S1 appears in numerous small granules scattered throughout the prophase nucleus. During metaphase and anaphase, a considerable amount of this protein is found in association with the surfaces of all chromosomes and finely dispersed in the cell plasm. In telophase, protein S1-containing material reaccumulates in granular particles in the nucleoplasm of the newly formed nuclei and, finally, in the re-forming nucleoli. These observations indicate that the nucleolus-derived particles containing ribosomal protein S1 are different from cytoplasmic ribosomes and, in the living cell, are selectively recollected after mitosis into the newly formed nuclei and translocated into a specific nucleolar subcompartment, i.e., the granular component. The nucleolar location of ribosomal protein S1 and its rearrangement during mitosis is discussed in relation to the distribution of other nucleolar proteins.

Effect of ethanol on nucleolar structure: a cytological indication of change in RNA/protein synthesis

The effects of chronic ethanol ingestion on an organelle known to be involved in protein synthesis were studied cytologically in nerve cells of the adult hamster. Twenty-six animals were administered standard laboratory chow and either tap water (controls) or a 15% ethanol solution (experimentals) for a period of 7 weeks. Brains were perfusion-fixed, sectioned transversely, and stained with buffered thionin for microscopic analysis. Reported here are changes in an RNA-rich intranucleolar body (INB) seen in facial motor neurons and cerebellar Purkinje cells of the golden hamster. After chronic ethanol ingestion, the size and frequency of the INB increased significantly in both cell populations. Theoretical considerations are discussed concerning the correlation between this apparent storing of nucleolar RNA/RNP and the biochemical evidence of other investigators for ethanol-induced alterations in RNA/protein synthesis and utilization in neurons.

Processing of the ribonucleic acid in the large ribosomal subunits of Urechis caupo

Ribosomal subunits were isolated from eggs or embryos of Urechis caupo, and the ribonucleic acid (RNA) was characterized by electrophoresis under denaturing conditions. The small ribosomal subunit contains a single 17S RNA sequence with a molecular weight of 6.20 X 10(5). The large ribosomal subunit contains four polynucleotide sequences. The 5S RNA has a molecular weight of 4.09 X 10(4). The 26S RNA complex isolated under nondenaturing conditions dissociates in the presence of formamide to yield a 5.8S RNA, molecular weight 5.46 X 10(4), and two approximately 17S and 17.5S RNA sequences with molecular weights of 6.04 X 10(5) and 6.61 X 10(5). The 17S and 17.5S RNAs of the large ribosomal subunits are formed in vivo from a 26S RNA precursor after assembly of the large ribosomal subunit. Large ribosomal subunits are transferred from the nucleus to the cytoplasm with the 26S RNA precursor intact. The hidden break to form the 17S and 17.5S RNAs is introduced in the cytoplasm. No intact 26S RNA could be detected in polysomes; this indicates that the conversion of the 26S RNA to the 17S and 17.5S RNAs may be required to produce large ribosomal subunits capable of participating in protein synthesis.

Regulation of ribosomal RNA accumulation by auxin in artichoke tissue

Artichoke (Helianthus tuberosus L.) tuber tissue cultured in the presence of the auxin 2,4-dichlorophenoxyacetic acid accumulates ribosomal RNA at a rate of 0.135 micrograms per hour per explant whereas there is little accumulation in nontreated tissue. The addition of auxin enhanced the transcription of the 2.5 x 10(6) precursor 3.5-fold and increased the rate of processing 1.8-fold. The major effect of auxin, however, was a vast increase in the rate of processing of the 1.39 x 10(6) precursor to the 1.3 x 10(6) mature ribosomal RNA. The incorporation of label into the 0.7 x 10(6) mature ribosomal RNA of treated tissue was in 10-fold excess over the control after a 30-minute pulse and remained so throughout the remainder of the labeling period. This level, however, was not reached for the complementary 1.3 mature RNA until 3 hours of continuous labeling, decreasing from a initial value of 40-fold excess. A complication in the processing of ribosomal RNA is the apparent increase in the stability of the 0.7 x 10(6) mature RNA with auxin treatment.

Oocyte differentiation in Urechis caupo (Echiura): a fine structural study

The fine structure of oocytes of Urechis caupo is described for seven arbitrary stages ranging from the smallest oocytes (7 mum in diameter) in the coelom to the mature oocytes (115 mum in diameter) in the storage organs. Although most types of cytoplasmic organelles accumulate more or less continuously, yolk granules do not appear until oocytes reach a diameter of 35 mum, and there is stage-specific synthesis of cortical granules in 60-80 mum oocytes. In the nucleus a single nucleolus first appears when an oocyte is 15 mum in diameter. Then a nucleolus satellite, which is about 3 mum in diameter, forms in 30 mum oocytes; this nucleolus satellite later (60-70 mum oocytes) becomes surrounded by 750 nm dense spherical bodies. Large (2-4 mum in diameter) juxtachromosomal spherules occur only in the nuclei of mature oocytes. Microvilli become progressively more numerous and longer until the oocyte reaches a diameter of 90 mum; their tips project 1 mum beyond the fibrous surface coat, which is 2 mum thick when well developed. Near the end of oocyte growth, the microvilli retract into the surface coat leaving their pinched-off tips adhering to the outside of the coat.

The effect of inhibitors of protein and nucleic acid synthesis on nucleolar size and enzyme induction in Jerusalem artichoke tuber slices

The effects of various inhibitors of protein and nucleic acid synthesis on the development of invertase activity and increased nucleolar volume in discs excised from tubers of artichoke tissue are compared. The results are discussed with reference to the current theories relevant to the action of the inhibitors and to the nature of the increase in nucleolar volume.

Cytological studies on the inhibition by 5-fluorouracil of ribosome synthesis and growth in jerusalem artichoke tuber slices

Rapid auxin-induced cell expansion in artichoke tuber slices is obtained by aerating the slices in water ("aging") prior to auxin treatment. 5-fluorouracil (5-FU), an inhibitor of ribosomal RNA synthesis in plant cells, markedly inhibits auxin-induced growth only if present in the pre-growth aging period. Autoradiographic studies show that 5-FU given in the aging and/or growth periods reduces the incorporation of RNA precursors into the cytoplasm. Pulse-chase experiments suggest that the reduced cytoplasmic incorporation is in large part due to decreased stability of ribosomal rNA, as nucleolar and chromatin label are only slightly depressed at the end of the pulse. Though the nucleoli continue to incorporate RNA precursors following 5-FU treatment, they lack a distinct granular zone, and appear as homogeneous fibrillar structures under the electron microscope. 5-FU has a parallel inhibitory effect on growth and protein synthesis as shown by (3)H-leucine studies during the growth period. Electron-microscope studies show that treatment with 5-FU causes decreased numbers of ribosomes and rough endoplasmic reticulum. The results suggest that the ribosomes and rough endoplasmic reticulum formed during aging are important in obtaining subsequent rapid auxin-induced expansion. The new ribosomes serve in part to replace pre-existing ribosomes present at the time of excision, which from electron microscopic evidence from 5-FU treated tissue, appear to slowly disappear.