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Gordeziani M, Varazi T, Pruidze M. Structural–functional organization of cytochrome P450 containing monooxygenase and some aspects of modeling. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.aasci.2016.05.007] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Shikama K. Nature of the FeO2 bonding in myoglobin and hemoglobin: A new molecular paradigm. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2005; 91:83-162. [PMID: 16005052 DOI: 10.1016/j.pbiomolbio.2005.04.001] [Citation(s) in RCA: 60] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
The iron(II)-dioxygen bond in myoglobin and hemoglobin is a subject of wide interest. Studies range from examinations of physical-chemical properties dependent on its electronic structure, to investigations of the stability as a function of oxygen supply. Among these, stability properties are of particular importance in vivo. Like all known dioxygen carriers synthesized so far with transition metals, the oxygenated forms of myoglobin and hemoglobin are known to be oxidized easily to their ferric met-forms, which cannot bind molecular oxygen and are therefore physiologically inactive. The mechanistic details of this autoxidation reaction, which are of clinical, as well as of physical-chemical, interest, have long been investigated by a number of authors, but a full understanding of the heme oxidation has not been reached so far. Recent kinetic and thermodynamic studies of the stability of oxymyoglobin (MbO2) and oxyhemoglobin (HbO2) have revealed new features in the FeO2 bonding. In vivo, the iron center is always subject to a nucleophilic attack of the water molecule or hydroxyl ion, which can enter the heme pocket from the surrounding solvent and thereby irreversibly displace the bound dioxygen from MbO2 or HbO2 in the form of O2- so that the iron is converted to the ferric met-form. Since the autoxidation reaction of MbO2 or HbO2 proceeds through a nucleophilic displacement following one-electron transfer from iron(II) to the bound O2, this reaction may be viewed as a meeting point of the stabilization and the activation of molecular oxygen performed by hemoproteins. Along with these lines of evidence, we finally discuss the stability property of human HbO2 and provide with the most recent state of hemoglobin research. The HbA molecule contains two types of alphabeta contacts and seems to differentiate them quite properly for its functional properties. The alpha1beta2 or alpha2beta1 contact is associated with the cooperative oxygen binding, whereas the alpha1beta1 or alpha2beta2 contact is used for controlling the stability of the bound O2. We can thus form a unified picture for hemoglobin function by closely integrating the cooperative and the stable binding of molecular oxygen with iron(II) in aqueous solvent. These new views on the nature of FeO2 bonding and the possible role of globin moiety in stabilizing MbO2 and HbO2 are of primary importance, not only for a full understanding of various hemoprotein reactions with O2, but also for planning new molecular designs for synthetic oxygen carriers which may be able to function in aqueous solvent and at physiological temperature.
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Affiliation(s)
- Keiji Shikama
- Biological Institute, Graduate School of Life Sciences, Tohoku University, Sendai, Japan.
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Abstract
This paper describes research performed in the Laboratory of Organic Chemistry, Showa Pharmaceutical University. Oxidation reactions involving the oxidase can be divided roughly into two kinds of reactions: The first involves electron removal from an aromatic ring or an active CH-bond. The other reaction involves hydrogen abstraction from an inactive CH-bond. The oxidase models, Fe(DMF)(3)Cl(2)(1+) and Fe(AN)(6)(3+)/AN, which we have synthesized, have been shown to work by the former mechanism, and the models Fe(AN)(6)(3+)-IO(4)(-)/AN, Fe(AN)(6)(2+)-Ac(2)O-H(2)O(2)/AN, Fe(AN)(6)(2+)-2PAH-5Py-Ac(2)O-H(2)O(2)/AN, Fe(PA)(3)(OH(2))-H(2)O(2)/AN and Fe(PA)(3)(OH(2))-O(2)-electrolysis/AN do so by the latter mechanism. Further, we found some iron (II or III)picolinate-H(2)O(2)/AN complexes have the 7 alpha-hydroxylase-like activity.
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Affiliation(s)
- Eiichi Kotani
- Showa Pharmaceutical University, Machida 194-8543, Japan
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Jin S, Bryson TA, Dawson JH. Hydroperoxoferric heme intermediate as a second electrophilic oxidant in cytochrome P450-catalyzed reactions. J Biol Inorg Chem 2004; 9:644-53. [PMID: 15365901 DOI: 10.1007/s00775-004-0575-7] [Citation(s) in RCA: 58] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2004] [Accepted: 06/24/2004] [Indexed: 10/26/2022]
Abstract
Experimental evidence supporting the catalytic activity of the peroxoferric and hydroperoxoferric cytochrome P450 intermediates as alternative oxidants to the compound I (ferryl) state in the oxygenation of organic substrates is reviewed. The peroxoferric P450 state is proposed to function as a nucleophile in the lyase step of the P450-aromatase reaction. Several systems are reviewed in which the hydroperoxoferric P450 intermediate likely functions as a second electrophilic oxidant, the "two-oxidants" model. These include alkene epoxidation, sulfoxidation, and hydroxylation of methyl groups on cyclopropane rings. The key use of the P450 mutants from different sources in which the conserved threonine in the distal substrate binding pocket is replaced with alanine, in order to minimize the formation of the compound I intermediate and unmask the reactivity of the hydroperoxoferric state, is emphasized. These data are discussed in the context of the "two-states" model, which proposes that the compound I P450 intermediate has both high- and low-spin states with different reactivities. A complicated reaction profile emerges for the wide range of P450 reactions involving up to three reactive intermediates, of which the most reactive, the compound I P450 state, has two spin states with different reactivities.
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Affiliation(s)
- Shengxi Jin
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
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Reipa V, Mayhew MP, Vilker VL. A direct electrode-driven P450 cycle for biocatalysis. Proc Natl Acad Sci U S A 1997; 94:13554-8. [PMID: 9391064 PMCID: PMC28344 DOI: 10.1073/pnas.94.25.13554] [Citation(s) in RCA: 92] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
The large potential of redox enzymes to carry out formation of high value organic compounds motivates the search for innovative strategies to regenerate the cofactors needed by their biocatalytic cycles. Here, we describe a bioreactor where the reducing power to the cycle is supplied directly to purified cytochrome CYP101 (P450cam; EC 1.14.15.1) through its natural redox partner (putidaredoxin) using an antimony-doped tin oxide working electrode. Required oxygen was produced at a Pt counter electrode by water electrolysis. A continuous catalytic cycle was sustained for more than 5 h and 2,600 enzyme turnovers. The maximum product formation rate was 36 nmol of 5-exo-hydroxycamphor/nmol of CYP101 per min.
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Affiliation(s)
- V Reipa
- Biotechnology Division, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA
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Fischer RT, Trzaskos JM, Magolda RL, Ko SS, Brosz CS, Larsen B. Lanosterol 14 alpha-methyl demethylase. Isolation and characterization of the third metabolically generated oxidative demethylation intermediate. J Biol Chem 1991. [DOI: 10.1016/s0021-9258(18)38093-1] [Citation(s) in RCA: 77] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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Shikama K. Autoxidation of oxymyoglobin: a meeting point of the stabilization and the activation of molecular oxygen. Biol Rev Camb Philos Soc 1990; 65:517-27. [PMID: 2176109 DOI: 10.1111/j.1469-185x.1990.tb01236.x] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
1. The primary events of haemoprotein reactions with molecular oxygen have been re-examined by placing special emphasis upon the reduction properties of dioxygen. 2. In the stepwise reduction of O2 to water via hydrogen peroxide, the addition of the first electron is an unfavourable, uphill process with the midpoint potential of -0.33 V, all the subsequent steps being downhill. This thermodynamic barrier to the first step is, therefore, a most crucial ridge located between the stabilization and the activation of dioxygen performed by haemoproteins. 3. If the proteins have a redox potential much higher than -0.33 V, molecular oxygen must bind to the proteins stably and reversibly. In Mb or Hb, however, the FeO2 centre is always subject to a nucleophilic attack of the water molecule or hydroxyl ion, which can enter the haem pocket from the surrounding solvent. These can cause irreversible oxidation of the FeO2 bonding to the ferric met-form with generation of the superoxide anion. 4. In cases of the oxygen activation, if haemoproteins have a redox potential lower than or close to -0.33 V, the first reduction of O2 to O2- would be a spontaneous process. Cytochrome P-450 provides such an example and can facilitate the subsequent addition of electrons that leads to the breaking of the O-O bond to yield the hydroxylating species. 5. As to the proteins whose redox potential is not facilitative and appreciably higher than -0.33 V, a bimetallic, concerted, two-equivalent reduction of the bound dioxygen to the peroxide level would be much more favoured without the intermediate formation of O2-. This is probably the case of cytochrome c oxidase for the reduction of O2 to water. 6. The redox potential diagrams thus visualize various aspects of the ways haemoproteins overcome their thermodynamic constraints and carry out their specific functions in the stabilization and the activation of molecular oxygen.
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Affiliation(s)
- K Shikama
- Biological Institute, Faculty of Science, Tohoku University, Sendai, Japan
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Towards a unified concept of oxygen activation by heme enzymes: the role of the proximal ligand. J Mol Struct 1989. [DOI: 10.1016/0022-2860(89)80011-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Sauret-Ignazi G, Dardas A, Pelmont J. Purification and properties of cytochrome P-450 from Moraxella sp. Biochimie 1988. [DOI: 10.1016/s0300-9084(88)80001-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Fretz H, Woggon WD. Regioselectivity and Deuterium Isotope Effects in Geraniol Hydroxylation by the Cytochrome P-450 Monooxygenase fromCatharanthus roseus (L.) G. DON. Helv Chim Acta 1986. [DOI: 10.1002/hlca.19860690822] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Hollebone BR. Categorization of lipophilic xenobiotics by the enthalpic structure-function response of hepatic mixed-function oxidase. Drug Metab Rev 1986; 17:93-143. [PMID: 3536381 DOI: 10.3109/03602538608998287] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Abstract
This review presents current ideas, models and experimental data relating to the precise chemistry that links the transition metal active centre of cytochrome P-450 systems, the unactivated alkane substrate and the triplet atmospheric dioxygen molecule. Aspects considered include the hypervalent transition metal, the reductive activation of the dioxygen molecule by two electrons as an intermediate in the four-equivalent oxidase mechanism, and the details of carbon-hydrogen and carbon-carbon fragmentation. Studies of the microbial camphor 5-exo hydroxylase system are used to exemplify the principles discussed.
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Bortolini O, Momenteau M, Meunier B. Definitive evidence for a proximal effect of pyridine in the NaOCl/Mn(porphyrin)x / pyridine catalytic oxygenation system. Tetrahedron Lett 1984. [DOI: 10.1016/s0040-4039(01)81683-x] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Nagano T, Yokoohji K, Hirobe M. Oxidation of substrates having labile hydrogens by superoxide in the presence of phosgene dimer. Tetrahedron Lett 1984. [DOI: 10.1016/s0040-4039(01)80075-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Kinetics and mechanism of CO binding to cytochromes P-450LM2 and P-450LM4. Effect of phospholipid, nonionic detergent, and substrate binding. J Biol Chem 1983. [DOI: 10.1016/s0021-9258(18)32730-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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Smith TD, Gaunt R, Ruzic I. Hydroxylation of aniline by hemin-thiol compound solubilised by non-ionic detergents: A model system of cytochrome P-450. Inorganica Chim Acta 1983. [DOI: 10.1016/s0020-1693(00)86497-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Khenkin AM, Shteinman AA. Oxidation of alkanes by peroxo complexes of metalloporphyrins in the presence of acetic anhydride. Russ Chem Bull 1982. [DOI: 10.1007/bf00954191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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On the mechanism of action of cytochrome P-450. Evaluation of homolytic and heterolytic mechanisms of oxygen-oxygen bond cleavage during substrate hydroxylation by peroxides. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(18)43242-5] [Citation(s) in RCA: 76] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
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On the mechanism of action of cytochrome P-450. Role of peroxy spectral intermediates in substrate hydroxylation. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(19)69271-9] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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Evidence for a homolytic mechanism of peroxide oxygen–oxygen bond cleavage during substrate hydroxylation by cytochrome P-450. J Biol Chem 1980. [DOI: 10.1016/s0021-9258(19)70262-2] [Citation(s) in RCA: 97] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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