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For: Schatz D, Leberman R, Eckstein F. Interaction of Escherichia coli tRNA(Ser) with its cognate aminoacyl-tRNA synthetase as determined by footprinting with phosphorothioate-containing tRNA transcripts. Proc Natl Acad Sci U S A 1991;88:6132-6. [PMID: 2068094 PMCID: PMC52036 DOI: 10.1073/pnas.88.14.6132] [Citation(s) in RCA: 81] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
Number Cited by Other Article(s)
1
Cela M, Théobald-Dietrich A, Rudinger-Thirion J, Wolff P, Geslain R, Frugier M. Identification of host tRNAs preferentially recognized by the Plasmodium surface protein tRip. Nucleic Acids Res 2021;49:10618-10629. [PMID: 34530443 PMCID: PMC8501954 DOI: 10.1093/nar/gkab769] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2021] [Revised: 08/17/2021] [Accepted: 08/26/2021] [Indexed: 12/19/2022]  Open
2
Krahn N, Fischer JT, Söll D. Naturally Occurring tRNAs With Non-canonical Structures. Front Microbiol 2020;11:596914. [PMID: 33193279 PMCID: PMC7609411 DOI: 10.3389/fmicb.2020.596914] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Accepted: 09/29/2020] [Indexed: 11/13/2022]  Open
3
Sakatani Y, Mizuuchi R, Ichihashi N. In vitro evolution of phi29 DNA polymerases through compartmentalized gene expression and rolling-circle replication. Protein Eng Des Sel 2020;32:481-487. [PMID: 32533140 DOI: 10.1093/protein/gzaa011] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2019] [Revised: 03/20/2020] [Accepted: 04/29/2020] [Indexed: 12/20/2022]  Open
4
Kellner S, DeMott MS, Cheng CP, Russell BS, Cao B, You D, Dedon PC. Oxidation of phosphorothioate DNA modifications leads to lethal genomic instability. Nat Chem Biol 2017;13:888-894. [PMID: 28604692 PMCID: PMC5577368 DOI: 10.1038/nchembio.2407] [Citation(s) in RCA: 56] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2016] [Accepted: 03/30/2017] [Indexed: 12/12/2022]
5
Lau MWL, Trachman RJ, Ferré-D'Amaré AR. A divalent cation-dependent variant of the glmS ribozyme with stringent Ca2+ selectivity co-opts a preexisting nonspecific metal ion-binding site. RNA (NEW YORK, N.Y.) 2017;23:355-364. [PMID: 27932587 PMCID: PMC5311495 DOI: 10.1261/rna.059824.116] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2016] [Accepted: 11/28/2016] [Indexed: 05/29/2023]
6
Ichihashi N, Usui K, Kazuta Y, Sunami T, Matsuura T, Yomo T. Darwinian evolution in a translation-coupled RNA replication system within a cell-like compartment. Nat Commun 2014;4:2494. [PMID: 24088711 DOI: 10.1038/ncomms3494] [Citation(s) in RCA: 122] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2013] [Accepted: 08/22/2013] [Indexed: 11/09/2022]  Open
7
Lau MWL, Ferré-D'Amaré AR. An in vitro evolved glmS ribozyme has the wild-type fold but loses coenzyme dependence. Nat Chem Biol 2013;9:805-10. [PMID: 24096303 DOI: 10.1038/nchembio.1360] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2013] [Accepted: 09/05/2013] [Indexed: 12/26/2022]
8
Dalby AB, Goodrich KJ, Pfingsten JS, Cech TR. RNA recognition by the DNA end-binding Ku heterodimer. RNA (NEW YORK, N.Y.) 2013;19:841-51. [PMID: 23610127 PMCID: PMC3683917 DOI: 10.1261/rna.038703.113] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
9
Biondi E, Burke DH. Separating and analyzing sulfur-containing RNAs with organomercury gels. Methods Mol Biol 2012;883:111-20. [PMID: 22589128 DOI: 10.1007/978-1-61779-839-9_8] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
10
The Seryl-tRNA synthetase/tRNASer acceptor stem interface is mediated via a specific network of water molecules. Biochem Biophys Res Commun 2011;412:532-6. [PMID: 21787751 DOI: 10.1016/j.bbrc.2011.07.030] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2011] [Accepted: 07/12/2011] [Indexed: 11/23/2022]
11
Scripture JB, Huber PW. Binding site for Xenopus ribosomal protein L5 and accompanying structural changes in 5S rRNA. Biochemistry 2011;50:3827-39. [PMID: 21446704 DOI: 10.1021/bi200286e] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
12
Eichert A, Fürste JP, Ulrich A, Betzel C, Erdmann VA, Förster C. Superposition of two tRNASer acceptor stem crystal structures: Comparison of structure, ligands and hydration. Biochem Biophys Res Commun 2010;395:291-5. [DOI: 10.1016/j.bbrc.2010.03.106] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2010] [Accepted: 03/17/2010] [Indexed: 10/19/2022]
13
Sekhon GS, Sen D. Unusual DNA-DNA cross-links between a photolyase deoxyribozyme, UV1C, and its bound oligonucleotide substrate. Biochemistry 2009;48:6335-47. [PMID: 19514779 DOI: 10.1021/bi900531z] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
14
The 1.2A crystal structure of an E. coli tRNASer)acceptor stem microhelix reveals two magnesium binding sites. Biochem Biophys Res Commun 2009;386:368-73. [PMID: 19527687 DOI: 10.1016/j.bbrc.2009.06.048] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2009] [Accepted: 06/09/2009] [Indexed: 11/22/2022]
15
Vasil'eva IA, Semenova EA, Moor NA. Interaction of human phenylalanyl-tRNA synthetase with specific tRNA according to thiophosphate footprinting. BIOCHEMISTRY (MOSCOW) 2009;74:175-85. [PMID: 19267673 DOI: 10.1134/s0006297909020084] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
16
An S, Barany G, Musier-Forsyth K. Evolution of acceptor stem tRNA recognition by class II prolyl-tRNA synthetase. Nucleic Acids Res 2008;36:2514-21. [PMID: 18310681 PMCID: PMC2377447 DOI: 10.1093/nar/gkn063] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
17
Ozlem Tastan Bishop A, Stelzl U, Pech M, Nierhaus KH. Characterization of RNA-protein interactions by phosphorothioate footprinting and its applications to the ribosome. Methods Mol Biol 2008;488:129-151. [PMID: 18982288 DOI: 10.1007/978-1-60327-475-3_9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
18
Förster C, Brauer ABE, Fürste JP, Betzel C, Weber M, Cordes F, Erdmann VA. Superposition of a tRNASer acceptor stem microhelix into the seryl-tRNA synthetase complex. Biochem Biophys Res Commun 2007;362:415-8. [PMID: 17719008 DOI: 10.1016/j.bbrc.2007.07.178] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2007] [Accepted: 07/31/2007] [Indexed: 11/18/2022]
19
Vasil'eva IA, Moor NA. Interaction of aminoacyl-tRNA synthetases with tRNA: general principles and distinguishing characteristics of the high-molecular-weight substrate recognition. BIOCHEMISTRY (MOSCOW) 2007;72:247-63. [PMID: 17447878 DOI: 10.1134/s0006297907030029] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
20
Yang Z, Sismour AM, Benner SA. Nucleoside alpha-thiotriphosphates, polymerases and the exonuclease III analysis of oligonucleotides containing phosphorothioate linkages. Nucleic Acids Res 2007;35:3118-27. [PMID: 17452363 PMCID: PMC1888802 DOI: 10.1093/nar/gkm168] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]  Open
21
Gruic-Sovulj I, Jaric J, Dulic M, Cindric M, Weygand-Durasevic I. Shuffling of discrete tRNASer regions reveals differently utilized identity elements in yeast and methanogenic archaea. J Mol Biol 2006;361:128-39. [PMID: 16822522 DOI: 10.1016/j.jmb.2006.06.008] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2006] [Revised: 06/05/2006] [Accepted: 06/06/2006] [Indexed: 10/24/2022]
22
Korencic D, Polycarpo C, Weygand-Durasevic I, Söll D. Differential modes of transfer RNASer recognition in Methanosarcina barkeri. J Biol Chem 2004;279:48780-6. [PMID: 15364939 DOI: 10.1074/jbc.m408753200] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
23
Bilokapic S, Korencic D, Söll D, Weygand-Durasevic I. The unusual methanogenic seryl-tRNA synthetase recognizes tRNASer species from all three kingdoms of life. ACTA ACUST UNITED AC 2004;271:694-702. [PMID: 14764085 DOI: 10.1111/j.1432-1033.2003.03971.x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
24
Li PTX, Gollnick P. Characterization of a trp RNA-binding Attenuation Protein (TRAP) Mutant with Tryptophan Independent RNA Binding Activity. J Mol Biol 2004;335:707-22. [PMID: 14687568 DOI: 10.1016/j.jmb.2003.11.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
25
Eckstein F. Developments in RNA chemistry, a personal view. Biochimie 2002;84:841-8. [PMID: 12458076 DOI: 10.1016/s0300-9084(02)01459-1] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
26
Crary SM, Kurz JC, Fierke CA. Specific phosphorothioate substitutions probe the active site of Bacillus subtilis ribonuclease P. RNA (NEW YORK, N.Y.) 2002;8:933-47. [PMID: 12166648 PMCID: PMC1370310 DOI: 10.1017/s1355838202025025] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
27
Guillier M, Allemand F, Raibaud S, Dardel F, Springer M, Chiaruttini C. Translational feedback regulation of the gene for L35 in Escherichia coli requires binding of ribosomal protein L20 to two sites in its leader mRNA: a possible case of ribosomal RNA-messenger RNA molecular mimicry. RNA (NEW YORK, N.Y.) 2002;8:878-889. [PMID: 12166643 PMCID: PMC1370305 DOI: 10.1017/s1355838202029084] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
28
Ming X, Smith K, Suga H, Hou YM. Recognition of tRNA backbone for aminoacylation with cysteine: evolution from Escherichia coli to human. J Mol Biol 2002;318:1207-20. [PMID: 12083512 DOI: 10.1016/s0022-2836(02)00232-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
29
Shimada N, Suzuki T, Watanabe K. Dual mode recognition of two isoacceptor tRNAs by mammalian mitochondrial seryl-tRNA synthetase. J Biol Chem 2001;276:46770-8. [PMID: 11577083 DOI: 10.1074/jbc.m105150200] [Citation(s) in RCA: 45] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
30
Fechter P, Giegé R, Rudinger-Thirion J. Specific tyrosylation of the bulky tRNA-like structure of brome mosaic virus RNA relies solely on identity nucleotides present in its amino acid-accepting domain. J Mol Biol 2001;309:387-99. [PMID: 11371160 DOI: 10.1006/jmbi.2001.4654] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
31
Stelzl U, Nierhaus KH. A short fragment of 23S rRNA containing the binding sites for two ribosomal proteins, L24 and L4, is a key element for rRNA folding during early assembly. RNA (NEW YORK, N.Y.) 2001;7:598-609. [PMID: 11345438 PMCID: PMC1370113 DOI: 10.1017/s1355838201002059] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
32
Dertinger D, Uhlenbeck OC. Evaluation of methylphosphonates as analogs for detecting phosphate contacts in RNA-protein complexes. RNA (NEW YORK, N.Y.) 2001;7:622-631. [PMID: 11345440 PMCID: PMC1370115 DOI: 10.1017/s1355838201002217] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
33
Drygin D, Zimmermann RA. Magnesium ions mediate contacts between phosphoryl oxygens at positions 2122 and 2176 of the 23S rRNA and ribosomal protein L1. RNA (NEW YORK, N.Y.) 2000;6:1714-1726. [PMID: 11142372 PMCID: PMC1370042 DOI: 10.1017/s1355838200001436] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
34
Yokogawa T, Shimada N, Takeuchi N, Benkowski L, Suzuki T, Omori A, Ueda T, Nishikawa K, Spremulli LL, Watanabe K. Characterization and tRNA recognition of mammalian mitochondrial seryl-tRNA synthetase. J Biol Chem 2000;275:19913-20. [PMID: 10764807 DOI: 10.1074/jbc.m908473199] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
35
Lenhard B, Orellana O, Ibba M, Weygand-Durasević I. tRNA recognition and evolution of determinants in seryl-tRNA synthesis. Nucleic Acids Res 1999;27:721-9. [PMID: 9889265 PMCID: PMC148239 DOI: 10.1093/nar/27.3.721] [Citation(s) in RCA: 63] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
36
Hartmuth K, Raker VA, Huber J, Branlant C, Lührmann R. An unusual chemical reactivity of Sm site adenosines strongly correlates with proper assembly of core U snRNP particles. J Mol Biol 1999;285:133-47. [PMID: 9878394 DOI: 10.1006/jmbi.1998.2300] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
37
Dabrowski M, Spahn CM, Schäfer MA, Patzke S, Nierhaus KH. Protection patterns of tRNAs do not change during ribosomal translocation. J Biol Chem 1998;273:32793-800. [PMID: 9830024 DOI: 10.1074/jbc.273.49.32793] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
38
Vörtler CS, Fedorova O, Persson T, Kutzke U, Eckstein F. Determination of 2'-hydroxyl and phosphate groups important for aminoacylation of Escherichia coli tRNAAsp: a nucleotide analogue interference study. RNA (NEW YORK, N.Y.) 1998;4:1444-1454. [PMID: 9814764 PMCID: PMC1369716 DOI: 10.1017/s1355838298980967] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
39
Verma S, Eckstein F. Modified oligonucleotides: synthesis and strategy for users. Annu Rev Biochem 1998;67:99-134. [PMID: 9759484 DOI: 10.1146/annurev.biochem.67.1.99] [Citation(s) in RCA: 223] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
40
Sood VD, Beattie TL, Collins RA. Identification of phosphate groups involved in metal binding and tertiary interactions in the core of the Neurospora VS ribozyme. J Mol Biol 1998;282:741-50. [PMID: 9743623 DOI: 10.1006/jmbi.1998.2049] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
41
Pleiss JA, Derrick ML, Uhlenbeck OC. T7 RNA polymerase produces 5' end heterogeneity during in vitro transcription from certain templates. RNA (NEW YORK, N.Y.) 1998;4:1313-7. [PMID: 9769105 PMCID: PMC1369703 DOI: 10.1017/s135583829800106x] [Citation(s) in RCA: 111] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
42
Hoch I, Berens C, Westhof E, Schroeder R. Antibiotic inhibition of RNA catalysis: neomycin B binds to the catalytic core of the td group I intron displacing essential metal ions. J Mol Biol 1998;282:557-69. [PMID: 9737922 DOI: 10.1006/jmbi.1998.2035] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
43
Shpanchenko OV, Dontsova OA, Bogdanov AA, Nierhaus KH. Structure of 5S rRNA within the Escherichia coli ribosome: iodine-induced cleavage patterns of phosphorothioate derivatives. RNA (NEW YORK, N.Y.) 1998;4:1154-1164. [PMID: 9740132 PMCID: PMC1369689 DOI: 10.1017/s1355838298980359] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
44
Spahn CM, Nierhaus KH. Models of the elongation cycle: an evaluation. Biol Chem 1998;379:753-72. [PMID: 9705140 DOI: 10.1515/bchm.1998.379.7.753] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
45
Burkhardt N, Jünemann R, Spahn CM, Nierhaus KH. Ribosomal tRNA binding sites: three-site models of translation. Crit Rev Biochem Mol Biol 1998;33:95-149. [PMID: 9598294 DOI: 10.1080/10409239891204189] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
46
Nierhaus KH, Stuhrmann HB, Svergun D. The ribosomal elongation cycle and the movement of tRNAs across the ribosome. PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1998;59:177-204. [PMID: 9427843 DOI: 10.1016/s0079-6603(08)61032-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
47
Reardon JT, Thompson LH, Sancar A. Rodent UV-sensitive mutant cell lines in complementation groups 6-10 have normal general excision repair activity. Nucleic Acids Res 1997;25:1015-21. [PMID: 9023113 PMCID: PMC146541 DOI: 10.1093/nar/25.5.1015] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]  Open
48
Shpanchenko OV, Zvereva MI, Dontsova OA, Nierhaus KH, Bogdanov AA. 5S rRNA sugar-phosphate backbone protection in complexes with specific ribosomal proteins. FEBS Lett 1996;394:71-5. [PMID: 8925931 DOI: 10.1016/0014-5793(96)00872-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
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Alexeeva EV, Shpanchenko OV, Dontsova OA, Bogdanov AA, Nierhaus KH. Interaction of mRNA with the Escherichia coli ribosome: accessibility of phosphorothioate-containing mRNA bound to ribosomes for iodine cleavage. Nucleic Acids Res 1996;24:2228-35. [PMID: 8710490 PMCID: PMC145942 DOI: 10.1093/nar/24.12.2228] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]  Open
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Saks ME, Sampson JR. Variant minihelix RNAs reveal sequence-specific recognition of the helical tRNA(Ser) acceptor stem by E.coli seryl-tRNA synthetase. EMBO J 1996;15:2843-9. [PMID: 8654382 PMCID: PMC450222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]  Open
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