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Zhao Y, Li G, Xu D, Wu T, Wang S, Cao Y, Gao W. Protective effect of pangasius myosin on thermal stability of lycopene and their interaction mechanism. Lebensm Wiss Technol 2022. [DOI: 10.1016/j.lwt.2022.114386] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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Grabowska O, Kogut MM, Żamojć K, Samsonov SA, Makowska J, Tesmar A, Chmur K, Wyrzykowski D, Chmurzyński L. Effect of Tetraphenylborate on Physicochemical Properties of Bovine Serum Albumin. Molecules 2021; 26:6565. [PMID: 34770974 PMCID: PMC8588492 DOI: 10.3390/molecules26216565] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Revised: 10/22/2021] [Accepted: 10/28/2021] [Indexed: 11/16/2022] Open
Abstract
The binding interactions of bovine serum albumin (BSA) with tetraphenylborate ions ([B(Ph)4]-) have been investigated by a set of experimental methods (isothermal titration calorimetry, steady-state fluorescence spectroscopy, differential scanning calorimetry and circular dichroism spectroscopy) and molecular dynamics-based computational approaches. Two sets of structurally distinctive binding sites in BSA were found under the experimental conditions (10 mM cacodylate buffer, pH 7, 298.15 K). The obtained results, supported by the competitive interactions experiments of SDS with [B(Ph)4]- for BSA, enabled us to find the potential binding sites in BSA. The first site is located in the subdomain I A of the protein and binds two [B(Ph)4]- ions (logK(ITC)1 = 7.09 ± 0.10; ΔG(ITC)1 = -9.67 ± 0.14 kcal mol-1; ΔH(ITC)1 = -3.14 ± 0.12 kcal mol-1; TΔS(ITC)1 = -6.53 kcal mol-1), whereas the second site is localized in the subdomain III A and binds five ions (logK(ITC)2 = 5.39 ± 0.06; ΔG(ITC)2 = -7.35 ± 0.09 kcal mol-1; ΔH(ITC)2 = 4.00 ± 0.14 kcal mol-1; TΔS(ITC)2 = 11.3 kcal mol-1). The formation of the {[B(Ph)4]-}-BSA complex results in an increase in the thermal stability of the alfa-helical content, correlating with the saturation of the particular BSA binding sites, thus hindering its thermal unfolding.
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Affiliation(s)
| | | | | | | | | | | | | | - Dariusz Wyrzykowski
- Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland; (O.G.); (M.M.K.); (K.Ż.); (S.A.S.); (J.M.); (A.T.); (K.C.); (L.C.)
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Bi S, Zhao R, Yuan Y, Li X, Shao D. Highly sensitive SERS determination of amprolium HCl based on Au@Ag core–shell alloy nanoparticles. Microchem J 2021. [DOI: 10.1016/j.microc.2021.106343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Qi X, Xu D, Zhu J, Wang S, Peng J, Gao W, Cao Y. Studying the interaction mechanism between bovine serum albumin and lutein dipalmitate: Multi-spectroscopic and molecular docking techniques. Food Hydrocoll 2021. [DOI: 10.1016/j.foodhyd.2020.106513] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Li X, Yuan Y, Zhao R, Shao D, Bi S. Assessment on the binding characteristics of residual marbofloxacin in animal-derived food to bovine/human serum albumin by spectroscopy and molecular modelling. LUMINESCENCE 2021; 36:977-985. [PMID: 33538386 DOI: 10.1002/bio.4022] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 01/29/2021] [Accepted: 02/02/2021] [Indexed: 12/12/2022]
Abstract
To assess the toxicity of residual marbofloxacin from animal-derived food, the interaction characteristics of marbofloxacin to bovine/human serum albumins (BSA/HSA) were explored using spectroscopic methods combined with molecular modelling. According to fluorescence spectra and time-resolved fluorescence spectra measurements, quenching of BSA/HSA fluorescence induced by marbofloxacin was characterized as static quenching. A 1:1 ground-state complex of marbofloxacin to BSA/HSA was formed with binding constant (Ka ) 1.66 × 104 /9.74 × 103 M-1 at 291 K. The location of marbofloxacin binding at site I within BSA/HSA was clarified by site marker competitive experiments. Molecular modelling demonstrated that the binding region for marbofloxacin to BSA and HSA were at site I with the lowest binding free energies of -22.86 and -21.60 kJ mol-1 , respectively. Hydrogen bonds and van der Waals forces were dominantly involved in the spontaneous binding. Nonradiation energy transferred from BSA and HSA to marbofloxacin, due to the close distance (r0 ) between marbofloxacin and Trp residues of BSA (4.28 nm) and HSA (3.34 nm). As explained by circular dichroism (CD) spectra, an increased BSA/HSA α-helix structure was observed after binding to marbofloxacin. Ultraviolet-visible (UV-vis) and Fourier transform infrared (FT-IR) spectra suggested that conformation of the two proteins was altered by marbofloxacin.
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Affiliation(s)
- Xu Li
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Yue Yuan
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Rui Zhao
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Di Shao
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Shuyun Bi
- College of Chemistry, Changchun Normal University, Changchun, China
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Liu J, Song S, Wu A, Wu X, Xiao J, Xu C. Development of a gold nanoparticle-based lateral-flow strip for the detection of dinitolmide in chicken tissue. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2020; 12:3210-3217. [PMID: 32930183 DOI: 10.1039/d0ay00885k] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Dinitolmide is a nitro amide coccidiostat used in poultry feed, and is a potential threat to the environment and human health. In this study, a monoclonal antibody (mAb) against dinitolmide was prepared and an immunochromatographic assay (ICA) was developed to detect residual dinitolmide in chicken tissue. The results show that the mAb exhibited high sensitivity, with a limit of detection as low as 9.01 ng mL-1. A cross reactivity test revealed that the mAb also had good specificity for dinitolmide. This ICA method showed a visible limit of detection of 2.5 μg kg-1, and a cut-off value of 25 μg kg-1 for testing dinitolmide in chicken sample extract by using the naked eye. Importantly, these observations using our ICA, were comparable to other methods of detection such as liquid chromatography, tandem mass spectrometry and indirect competitive enzyme-linked immunosorbent assays (IC-ELISA). These data suggest that our ICA method is a reliable, portable, and high-throughput method for the detection of dinitolmide residues in chicken tissue.
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Affiliation(s)
- Jie Liu
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China.
- International Joint Research Laboratory for Biointerface and Biodetection, School of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China
| | - Shanshan Song
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China.
- International Joint Research Laboratory for Biointerface and Biodetection, School of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China
| | - Aihong Wu
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China.
- International Joint Research Laboratory for Biointerface and Biodetection, School of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China
| | - Xiaoling Wu
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China.
- International Joint Research Laboratory for Biointerface and Biodetection, School of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China
| | - Jing Xiao
- NHC Key Laboratory of Food Safety Risk Assessment, China National Center for Food Safety Risk Assessment, Beijing, People's Republic of China.
| | - Chuanlai Xu
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China.
- International Joint Research Laboratory for Biointerface and Biodetection, School of Food Science and Technology, Jiangnan University, Wuxi, People's Republic of China
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Li X, Sun X, Zhao R, Shao D, Bi S. Study on the binding of sulfaclozine sodium monohydrate with bovine and human serum albumins using multi-spectroscopy and molecular docking. J Biomol Struct Dyn 2020; 39:4835-4844. [PMID: 32579083 DOI: 10.1080/07391102.2020.1780945] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Abstract
The interactions of sulfaclozine sodium monohydrate (SSM) with bovine and human serum albumins (BSA and HSA) were studied by multi-spectroscopy and molecular docking technique. Stern-Volmer analysis and fluorescence lifetime measurements suggested the quenching processes were static. According to the Fluorescence resonance energy transfer (FRET) theory, the binding distances were obtained indicating SSM interacted with BSA/HSA along with non-radiation energy conversion. Electrostatic attraction was the main force in keeping the stability of the compound based on thermodynamic parameters. Circular dichroism (CD), synchronous fluorescence and Fourier Transform infrared (FT-IR) spectra embodied the secondary structures of serum albumins were transformed by SSM. The site marker competitive and molecular docking measurements testified SSM bound to BSA/HSA at site I. In conclusion, the secondary structures of BSA/HSA were changed by SSM in the static fluorescence quenching processes with the non-radiation energy conversion. The binding sites were all located at site I and electrostatic attraction was the main force for the new compound. Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Xu Li
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Xiaoyue Sun
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Rui Zhao
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Di Shao
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Shuyun Bi
- College of Chemistry, Changchun Normal University, Changchun, China
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Bi S, Sun X, Li X, Zhao R, Shao D. Depicting the binding of furazolidone/furacilin with DNA by multiple spectroscopies, voltammetric as well as molecular docking. LUMINESCENCE 2019; 35:493-502. [DOI: 10.1002/bio.3754] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2019] [Revised: 10/12/2019] [Accepted: 11/25/2019] [Indexed: 12/29/2022]
Affiliation(s)
- Shuyun Bi
- College of ChemistryChangchun Normal University Changchun China
| | - Xiaoyue Sun
- College of ChemistryChangchun Normal University Changchun China
| | - Xu Li
- College of ChemistryChangchun Normal University Changchun China
| | - Rui Zhao
- College of ChemistryChangchun Normal University Changchun China
| | - Di Shao
- College of ChemistryChangchun Normal University Changchun China
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Sun X, Bi S, Wu J, Zhao R, Shao D, Song Z. Multispectral and molecular docking investigations on the interaction of primethamine/trimethoprim with BSA/HSA. J Biomol Struct Dyn 2019; 38:934-942. [PMID: 30843766 DOI: 10.1080/07391102.2019.1588785] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Primethamine (PMA) and trimethoprim (TMP) were investigated as traditional coccidiostats on the binding of bovine serum albumin (BSA) and human serum albumin (HSA) by multispectral and molecular docking techniques. The Stern-Volmer plots and time-resolved fluorescence measurement declared that PMA/TMP quenching the intrinsic fluorescence of BSA/HSA was static quenching process. The binding constants (Ka) and binding sites (n) were calculated at different temperatures. Meanwhile, thermodynamic parameters showed electrostatic forces played a leading role in the interaction of PMA/TMP with BSA/HSA. Some metal ions such as K+, Mg2+, Cu2+, Ca2+, Zn2+ and Fe3+ had no effects on the binding system. The UV-vis absorption spectra confirmed that the interaction between PMA/TMP and BSA/HSA did happen. The analyses of synchronous fluorescence, FT-IR and circular dichroism spectra illustrated that PMA/TMP changed the secondary structures of BSA/HSA. According to Förster non-radiative energy transfer theory, the binding distance between PMA/TMP and BSA/HSA was calculated. The binding location of PMA/TMP to BSA/HSA was identified as sub-domain IIA, which was further confirmed by molecular docking.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Xiaoyue Sun
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Shuyun Bi
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Jun Wu
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Rui Zhao
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Di Shao
- College of Chemistry, Changchun Normal University, Changchun, China
| | - Zhe Song
- College of Chemistry, Changchun Normal University, Changchun, China
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