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Johnson J, Kumar S. Investigating the protein modification and degradation under the influence of petrol and kerosene. Forensic Sci Int 2025; 367:112379. [PMID: 39864396 DOI: 10.1016/j.forsciint.2025.112379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2024] [Revised: 12/24/2024] [Accepted: 01/18/2025] [Indexed: 01/28/2025]
Abstract
During any crime scene investigation, forensic experts gather a variety of evidence in various forms, often degraded, contaminated, or fragmentary in nature. Arson-associated suicide or homicidal cases often result in partial or complete burning of this evidence, making the acquisition of crucial information more challenging. Proteins found in biological samples serve as crucial sources of evidence in criminal investigations due to their abundance within the body and greater stability than another biological macromolecule. Protein based technologies are gaining momentum for investigating wide range of forensic cases. In the present study, we probed different modifications in chicken protein subjecting after burning with petrol and kerosene individually. Structural changes and modifications in burnt chicken meat protein samples were analyzed by various biophysical techniques, such as absorption and fluorescence spectroscopy. Gel-based method such as electrophoresis was performed which showed different degradation patterns under the influence of petrol and kerosene. Our results showed that petrol-exposed meat sample caused higher rate of protein degradation than kerosene exposed samples, over a period of 12 days. Prevalent oxidative modifications, including increased carbonylation and decreased thiol levels were observed in both petrol and kerosene treated sample attributing oxidative stress environment caused by burning. Present study highlights that petrol is more potent in causing damage and protein modification than kerosene. Furthermore, this study elucidates the application of protein-based methods in forensic science, which can serve as a corroborative approach in ascertaining the cause of death in cases of burning, particularly where fuel has been utilized.
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Affiliation(s)
- Jennifer Johnson
- Laboratory of Forensic Biology and Biotechnology, School of Forensic Science, National Forensic Sciences University, Gandhinagar, Gujarat 382007, India
| | - Satish Kumar
- Laboratory of Forensic Biology and Biotechnology, School of Forensic Science, National Forensic Sciences University, Gandhinagar, Gujarat 382007, India; National Forensic Sciences University, Bhopal Campus, Madhya Pradesh 462030, India.
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Uematsu M, Miyamoto Y, Shimizu M, Kajiura T, Saito A, Takashina M, Fujita S, Nakano Y, Shimizu T, Nagahara Y, Kosaka H, Muramatsu H, Mori M, Suzuki T, Nakamura T, Tanemura A, Hosaka J, Mori T, Kato S, Itagaki A, Inoue T, Matsumoto S, Naito T, Fujii S, Nakaoka R, Yamamoto E. Design and validation of a method for evaluating medical device cleanliness by recovering and quantifying residual proteins on stainless plates. Sci Rep 2024; 14:21982. [PMID: 39304678 PMCID: PMC11415368 DOI: 10.1038/s41598-024-72473-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 09/09/2024] [Indexed: 09/22/2024] Open
Abstract
We recently reported a method for recovering and quantifying residual proteins bound to surfaces of various medical instruments via thermal coagulation under neutral pH and room temperature. The method effectively recovered and solubilised coagulated proteins at high temperatures in dry and humid conditions, with a protein recovery rate of > 90%. This study validated the previous method by comparing residual protein recovery from test samples using a conventional extraction solution (1% SDS, [pH 11.0]) and proposed solution (1% SDS, 10 mM TCEP, and 10 mM HEPES [pH 7.0]). To mimic soiled medical equipment, pseudo-blood-contaminated stainless steel plates were prepared. Residual protein was recovered using conventional and proposed solutions under varying temperature and humidity conditions. Quantitative protein recovery limits were determined at nine facilities. Compared with the conventional solution, the proposed solution recovered proteins more effectively from samples processed at temperatures > 60 °C. However, low recovery rates were observed for samples processed at 95 °C, possibly owing to differences in protein adhesion due to sample and plate-surface properties. Our findings present a method for quantifying residual proteins on medical instruments exposed to high temperatures during use or disinfection. Further studies should standardise test soiling conditions, materials, and solutions to evaluate cleaning methods.
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Affiliation(s)
- Miyuki Uematsu
- Division of Medical Devices, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki-shi, Kanagawa, 210-9501, Japan.
| | - Yuko Miyamoto
- Division of Medical Devices, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki-shi, Kanagawa, 210-9501, Japan
| | - Masatake Shimizu
- Development Laboratory, Inui Medics Co., Ltd., 2-1-4 Honjo, Higashiosaka-shi, Osaka, 578-0953, Japan
| | - Tsuyoshi Kajiura
- Development Laboratory, Inui Medics Co., Ltd., 2-1-4 Honjo, Higashiosaka-shi, Osaka, 578-0953, Japan
| | - Atsushi Saito
- Central Sterile Supply Department, Osaka University Hospital, 2-15 Yamadaoka, Suita-shi, Osaka, 565-0871, Japan
| | - Masaki Takashina
- Central Sterile Supply Department, Osaka University Hospital, 2-15 Yamadaoka, Suita-shi, Osaka, 565-0871, Japan
| | - Satoshi Fujita
- Engineering Department, Clean Chemical Co., Ltd., 4-28-9 Shima, Ibaraki-shi, Osaka, 567-0854, Japan
| | - Yuko Nakano
- Engineering Department, Clean Chemical Co., Ltd., 4-28-9 Shima, Ibaraki-shi, Osaka, 567-0854, Japan
| | - Toshiaki Shimizu
- Infection Control Business Unit, Sakura Seiki Co., Ltd., 1122-8 Yawata, Chikuma-shi, Nagano, 387-0023, Japan
| | - Yuki Nagahara
- Infection Control Business Unit, Sakura Seiki Co., Ltd., 1122-8 Yawata, Chikuma-shi, Nagano, 387-0023, Japan
| | - Hayato Kosaka
- Infection Control Business Unit, Sakura Seiki Co., Ltd., 1122-8 Yawata, Chikuma-shi, Nagano, 387-0023, Japan
| | - Hiroki Muramatsu
- SUD Re-manufacturing Business Preparation Office, Suzuyo & Co., Ltd., 1-2-12 Shibakoen, Minato-ku, Tokyo, 105-0011, Japan
| | - Masafumi Mori
- SUD Re-manufacturing Business Preparation Office, Suzuyo & Co., Ltd., 1-2-12 Shibakoen, Minato-ku, Tokyo, 105-0011, Japan
| | - Takamasa Suzuki
- SUD Re-manufacturing Business Preparation Office, Suzuyo & Co., Ltd., 1-2-12 Shibakoen, Minato-ku, Tokyo, 105-0011, Japan
| | - Takayoshi Nakamura
- Institute of Surface Science and Technology, Nicca Chemical Co., Ltd., 4-23-1 Bunkyo, Fukui-shi, Fukui, 910-8670, Japan
| | - Atsushi Tanemura
- Institute of Surface Science and Technology, Nicca Chemical Co., Ltd., 4-23-1 Bunkyo, Fukui-shi, Fukui, 910-8670, Japan
| | - Junki Hosaka
- Laboratory and Speciality Chemicals Division, FUJIFILM Wako Pure Chemical Corp., 6-1 Takata-cho, Amagasaki-shi, Hyogo, 661-0963, Japan
| | - Takahide Mori
- Laboratory and Speciality Chemicals Division, FUJIFILM Wako Pure Chemical Corp., 6-1 Takata-cho, Amagasaki-shi, Hyogo, 661-0963, Japan
| | - Seiichi Kato
- Research and Development Division, Hogy Medical Co., Ltd., 1873-1 Fusa, Miho-mura, Inashiki-gun, Ibaraki, 300-0427, Japan
| | - Ayaka Itagaki
- Research and Development Division, Hogy Medical Co., Ltd., 1873-1 Fusa, Miho-mura, Inashiki-gun, Ibaraki, 300-0427, Japan
| | - Toshiki Inoue
- Research and Development Division, Hogy Medical Co., Ltd., 1873-1 Fusa, Miho-mura, Inashiki-gun, Ibaraki, 300-0427, Japan
| | - Shinichi Matsumoto
- System Sales Department, Muranaka Medical Instruments Co., Ltd., Funakoshi-cho, Chuo-ku, Osaka, 540-0036, Japan
| | - Tomoko Naito
- R&D Division, Miura Co., Ltd., 7 Horie-cho, Matsuyama-shi, Ehime, 799-2696, Japan
| | - Shinji Fujii
- R&D Division, Miura Co., Ltd., 7 Horie-cho, Matsuyama-shi, Ehime, 799-2696, Japan
| | - Ryusuke Nakaoka
- Division of Medical Devices, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki-shi, Kanagawa, 210-9501, Japan
| | - Eiichi Yamamoto
- Division of Medical Devices, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki-shi, Kanagawa, 210-9501, Japan
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Gehrke P, Riebe O, Fischer C, Weinhold O, Dhom G, Sader R, Weigl P. Microbiological cleaning and disinfection efficacy of a three-stage ultrasonic processing protocol for CAD-CAM implant abutments. J Adv Prosthodont 2022; 14:273-284. [PMID: 36452367 PMCID: PMC9672693 DOI: 10.4047/jap.2022.14.5.273] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Revised: 09/19/2022] [Accepted: 09/27/2022] [Indexed: 09/22/2023] Open
Abstract
PURPOSE Computer-aided design and manufacturing (CAD-CAM) of implant abutments has been shown to result in surface contamination from site-specific milling and fabrication processes. If not removed, these contaminants can have a potentially adverse effect and may trigger inflammatory responses of the peri-implant tissues. The aim of the present study was to evaluate the bacterial disinfection and cleaning efficacy of ultrasonic reprocessing in approved disinfectants to reduce the microbial load of CAD-CAM abutments. MATERIALS AND METHODS Four different types of custom implant abutments (total N = 32) with eight specimens in each test group (type I to IV) were CAD-CAM manufactured. In two separate contamination experiments, specimens were contaminated with heparinized sheep blood alone and with heparinized sheep blood and the test bacterium Enterococcus faecium. Abutments in the test group were processed according to a three-stage ultrasonic protocol and assessed qualitatively and quantitatively by determination of residual protein. Ultrasonicated specimens contaminated with sheep blood and E. faecium were additionally eluted and the dilutions were incubated on agar plates for seven days. The determined bacterial counts were expressed as colony-forming units (CFU). RESULTS Ultrasonic reprocessing resulted in a substantial decrease in residual bacterial protein to less than 80 µg and a reduction in microbiota of more than 7 log levels of CFU for all abutment types, exceeding the effect required for disinfection. CONCLUSION A three-stage ultrasonic cleaning and disinfection protocol results in effective bacterial decontamination. The procedure is reproducible and complies with the standardized reprocessing and disinfection specifications for one- or two-piece CAD-CAM implant abutments.
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Affiliation(s)
- Peter Gehrke
- Department of Postgraduate Education, Master of Oral Implantology, Center for Dentistry and Oral Medicine (Carolinum), Johann Wolfgang Goethe University, Frankfurt, Germany
- Private Practice for Oral Surgery and Implant Dentistry, Ludwigshafen, Germany
| | - Oliver Riebe
- HygCen Germany GmbH, Laboratory, Schwerin, Germany
| | | | - Octavio Weinhold
- Private Practice for Oral Surgery and Implant Dentistry, Ludwigshafen, Germany
| | - Günter Dhom
- Private Practice for Oral Surgery and Implant Dentistry, Ludwigshafen, Germany
| | - Robert Sader
- Department for Oral, Cranio-Maxillofacial and Facial Plastic Surgery, Medical Center of the Goethe University Frankfurt, Germany
| | - Paul Weigl
- Department of Prosthodontics and Head of Department of Postgraduate Education, Master of Oral Implantology, Center for Dentistry and Oral Medicine (Carolinum), Johann Wolfgang Goethe University, Frankfurt, Germany
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Harimawan A, Wonoputri V, Ariel J, Julian H. Biofouling control of membrane distillation for seawater desalination: Effect of air-backwash and chemical cleaning on biofouling formation. BIOFOULING 2022; 38:889-902. [PMID: 36382389 DOI: 10.1080/08927014.2022.2146496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2022] [Revised: 11/04/2022] [Accepted: 11/07/2022] [Indexed: 06/16/2023]
Abstract
This study explored the applicability of chemical cleaning and air-backwash to alleviate biofouling on seawater membrane distillation (SWMD). Membrane performance and wettability properties maintained at optimum duration and frequency of the treatments, as indicated by low permeate conductivity throughout the tests. The cleaning of the membrane using 2% NaOH by immersing the membrane for 30 min after 240 min operation removed the biofouling layer, indicated by low permeate conductivity of 370 µScm-1 after cleaning. However, more frequent membrane cleaning led to membrane damage, more severe wetting, and membrane hydrophobicity reduction. Ten-second air-backwash after 240 min of operation was also effective in controlling the biofouling, particularly when conducted at air pressure of 1 bar. More frequent air-backwash resulted in more aggravated inorganic fouling and accelerated biofouling formation due to the recurring introduction of air, leading to rapid membrane wetting.
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Affiliation(s)
- Ardiyan Harimawan
- Chemical Engineering Department, Institut Teknologi Bandung (ITB), Bandung, Indonesia
| | - Vita Wonoputri
- Chemical Engineering Department, Institut Teknologi Bandung (ITB), Bandung, Indonesia
| | - Jonathan Ariel
- Chemical Engineering Department, Institut Teknologi Bandung (ITB), Bandung, Indonesia
| | - Helen Julian
- Chemical Engineering Department, Institut Teknologi Bandung (ITB), Bandung, Indonesia
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Lee SW, Phillips KS, Gu H, Kazemzadeh-Narbat M, Ren D. How microbes read the map: Effects of implant topography on bacterial adhesion and biofilm formation. Biomaterials 2020; 268:120595. [PMID: 33360301 DOI: 10.1016/j.biomaterials.2020.120595] [Citation(s) in RCA: 79] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Revised: 11/24/2020] [Accepted: 12/06/2020] [Indexed: 12/19/2022]
Abstract
Microbes have remarkable capabilities to attach to the surface of implanted medical devices and form biofilms that adversely impact device function and increase the risk of multidrug-resistant infections. The physicochemical properties of biomaterials have long been known to play an important role in biofilm formation. More recently, a series of discoveries in the natural world have stimulated great interest in the use of 3D surface topography to engineer antifouling materials that resist bacterial colonization. There is also increasing evidence that some medical device surface topographies, such as those designed for tissue integration, may unintentionally promote microbial attachment. Despite a number of reviews on surface topography and biofilm control, there is a missing link between how bacteria sense and respond to 3D surface topographies and the rational design of antifouling materials. Motivated by this gap, we present a review of how bacteria interact with surface topographies, and what can be learned from current laboratory studies of microbial adhesion and biofilm formation on specific topographic features and medical devices. We also address specific biocompatibility considerations and discuss how to improve the assessment of the anti-biofilm performance of topographic surfaces. We conclude that 3D surface topography, whether intended or unintended, is an important consideration in the rational design of safe medical devices. Future research on next-generation smart antifouling materials could benefit from a greater focus on translation to real-world applications.
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Affiliation(s)
- Sang Won Lee
- Department of Biomedical and Chemical Engineering, Syracuse University, Syracuse, NY, 13244, United States; Syracuse Biomaterials Institute, Syracuse University, Syracuse, NY, 13244, United States
| | - K Scott Phillips
- United States Food and Drug Administration, Office of Medical Products and Tobacco, Center for Devices and Radiological Health, Office of Science and Engineering Laboratories, Division of Biology, Chemistry, and Materials Science, Silver Spring, MD, 20993, United States.
| | - Huan Gu
- Department of Biomedical and Chemical Engineering, Syracuse University, Syracuse, NY, 13244, United States; Syracuse Biomaterials Institute, Syracuse University, Syracuse, NY, 13244, United States
| | - Mehdi Kazemzadeh-Narbat
- United States Food and Drug Administration, Office of Medical Products and Tobacco, Center for Devices and Radiological Health, Office of Product Evaluation and Quality, Office of Health Technology 6, Silver Spring, MD, 20993, United States; Musculoskeletal Clinical Regulatory Advisers (MCRA), Washington DC, 20001, United States
| | - Dacheng Ren
- Department of Biomedical and Chemical Engineering, Syracuse University, Syracuse, NY, 13244, United States; Syracuse Biomaterials Institute, Syracuse University, Syracuse, NY, 13244, United States; Department of Civil and Environmental Engineering, Syracuse University, Syracuse, NY, 13244, United States; Department of Biology, Syracuse University, Syracuse, NY, 13244, United States.
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Ji XY, Ning PY, Fei CN, Liu J, Liu H, Song J. The importance of sampling technique and rinse water for assessing flexible gastrointestinal endoscope reprocessing: A 3-year study covering 59 centers. Am J Infect Control 2020; 48:19-25. [PMID: 31400884 DOI: 10.1016/j.ajic.2019.07.008] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Revised: 07/11/2019] [Accepted: 07/11/2019] [Indexed: 01/12/2023]
Abstract
BACKGROUND Various guidelines recommend several sampling techniques to verify endoscope reprocessing, but a comparative study of the efficiency for recovering microorganisms was rare. Our goal was to compare different sampling techniques for the postreprocessing endoscope to assess residual bacterial contamination and analysis of the critical factors affecting the endoscope reprocessing failure. METHODS From 2016 to 2018, 3 techniques, the conventional flushing sampling method, flush-brush-flush sampling method (FBFSM), and pump-assisted sampling method (PASM), were compared covering all 59 endoscope units in Tianjin, China. RESULTS A total of 237 (84.64%) flushing channel samples and 110 (61.11%) final rinse water samples met the Chinese national standard. The univariate analysis showed that the qualified rates of endoscope reprocessing sampled by PASM (65.52%) and FBFSM (75%) were significantly lower than those of the conventional flushing sampling method (91.38%). Five other factors, including the final rinse water, dry, and hospital level, were potential factors besides sample technique. The multivariate logistic analysis indicated only 2 factors (sampling technique and final rinse water) remained in the model. FBFSM, PASM, and the purified water were significantly associated with the odds of endoscope reprocessing failure, with the odds ratio (95% confidence interval) of which were 4.206 (1.757-10.067), 5.326 (2.463-11.645), and 0.309 (0.137-0.695), respectively. CONCLUSIONS The problem of residual microorganisms of the postreprocessing endoscope was severe. Sampling technique and final rinse water were critical for endoscope reprocessing verification.
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Xu Y, Dhaouadi Y, Stoodley P, Ren D. Sensing the unreachable: challenges and opportunities in biofilm detection. Curr Opin Biotechnol 2019; 64:79-84. [PMID: 31766008 DOI: 10.1016/j.copbio.2019.10.009] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2019] [Revised: 10/21/2019] [Accepted: 10/24/2019] [Indexed: 12/20/2022]
Abstract
Bacteria can attach to essentially all materials and form multicellular biofilms with high-level tolerance to antimicrobials. Detrimental biofilms are responsible for a variety of problems ranging from food and water contamination, bio-corrosion, to drug resistant infections. Besides the challenges in control, biofilms are also difficult to detect due to the lack of biofilm-specific biomarkers and methods for non-destructive imaging. In this article, we present a concise review of recent advancements in this field, with a focus on medical device-associated infections. We also discuss the technologies that have potential for non-destructive detection of bacterial biofilms.
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Affiliation(s)
- Yikang Xu
- Department of Biomedical and Chemical Engineering, Syracuse University, Syracuse, NY 13244, United States; Syracuse Biomaterials Institute, Syracuse University, Syracuse, NY 13244, United States
| | - Yousr Dhaouadi
- Department of Biomedical and Chemical Engineering, Syracuse University, Syracuse, NY 13244, United States; Syracuse Biomaterials Institute, Syracuse University, Syracuse, NY 13244, United States
| | - Paul Stoodley
- Departments of Microbial Infection and Immunity and Orthopaedics and the Infectious Diseases Institute, Ohio State University, Columbus, OH 43210, United States; National Centre for Advanced Tribology at Southampton (nCATS), and National Biofilm Innovation Centre, Mechanical Engineering, University of Southampton, United Kingdom
| | - Dacheng Ren
- Department of Biomedical and Chemical Engineering, Syracuse University, Syracuse, NY 13244, United States; Syracuse Biomaterials Institute, Syracuse University, Syracuse, NY 13244, United States; Department of Civil and Environmental Engineering, Syracuse University, Syracuse, NY 13244, United States; Department of Biology, Syracuse University, Syracuse, NY 13244, United States.
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