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Phiri MM, Davoren E, Vorster BC. Miniaturization and Automation Protocol of a Urinary Organic Acid Liquid-Liquid Extraction Method on GC-MS. Molecules 2023; 28:5927. [PMID: 37570898 PMCID: PMC10420839 DOI: 10.3390/molecules28155927] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Revised: 07/28/2023] [Accepted: 08/04/2023] [Indexed: 08/13/2023] Open
Abstract
The aim of this study was to improve the extraction method for urinary organic acids by miniaturizing and automating the process. Currently, manual extraction methods are commonly used, which can be time-consuming and lead to variations in test results. To address these issues, we reassessed and miniaturized the in-house extraction method, reducing the number of steps and the sample-to-solvent volumes required. The evaluated miniaturized method was translated into an automated extraction procedure on a MicroLab (ML) Star (Hamilton Technologies) liquid handler. This was then validated using samples obtained from the ERNDIM External Quality Assurance program. The organic acid extraction method was successfully miniaturized and automated using the Autosampler robot. The linear range for most of the thirteen standard analytes fell between 0 to 300 mg/L in spiked synthetic urine, with low (50 mg/L), medium (100 mg/L), and high (500 mg/L) levels. The correlation coefficient (r) for most analytes was >0.99, indicating a strong relationship between the measured values. Furthermore, the automated extraction method demonstrated acceptable precision, as most organic acids had coefficients of variation (CVs) below 20%. In conclusion, the automated extraction method provided comparable or even superior results compared to the current in-house method. It has the potential to reduce solvent volumes used during extraction, increase sample throughput, and minimize variability and random errors in routine diagnostic settings.
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Affiliation(s)
- Masauso Moses Phiri
- Department of Pathology and Microbiology, School of Medicine, University of Zambia, Lusaka 10101, Zambia
- Centre for Human Metabolomics, North-West University, Potchefstroom 2531, South Africa
| | - Elmarie Davoren
- Centre for Human Metabolomics, North-West University, Potchefstroom 2531, South Africa
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2
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Jin L, Zhang T, Zeng J, Zhang C. Laboratory practice of organic acid analysis based on gas chromatography–mass spectrometry in China. J LAB MED 2021. [DOI: 10.1515/labmed-2021-0086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Abstract
Objectives
The aim of this study is to investigate the status of laboratory practice of organic acid (OA) analysis using gas chromatography–mass spectrometry in China.
Methods
A survey, investigating details of laboratory practice of OA analysis, was issued on the website of the National Center for Clinical Laboratories of China. Nationwide external quality assessment participating laboratories of OA assay were informed to participate in this survey.
Results
A total of 36 laboratories completed this survey. Most laboratories started OA analysis during 2016–2020. Most (100%) labs reported semi-quantitative results, in which 79.4% of labs adopted the form of the ratio of peak area of OA and quantitative internal standard. Rare labs reported quantitative results. Few labs released reports in three days, most in 5–7 days. The source of control materials varied, 64.5% of labs adapted self-made materials. A total of 43.8% of laboratories directly used reference intervals (RIs) from published literature, 43.8% of laboratories established RIs themselves, but 21.2% of laboratories reported they didn’t verify RIs.
Conclusions
Appropriate supervision for the organic acid assay is needed in the aspect of the turnaround time of reporting results, the establishment validation and verification of reference ranges, and the quantification of results.
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Affiliation(s)
- Lizi Jin
- National Center for Clinical Laboratories, Beijing Engineering Research Center of Laboratory Medicine, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences , Chinese Academy of Medical Sciences and Peking Union Medical College. No. 1 Dahua Road , Dongcheng District , Beijing 100730, P. R. China
| | - Tianjiao Zhang
- National Center for Clinical Laboratories, Beijing Engineering Research Center of Laboratory Medicine, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences , Chinese Academy of Medical Sciences and Peking Union Medical College. No. 1 Dahua Road , Dongcheng District , Beijing 100730, P. R. China
| | - Jie Zeng
- National Center for Clinical Laboratories, Beijing Engineering Research Center of Laboratory Medicine, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences , Chinese Academy of Medical Sciences and Peking Union Medical College. No. 1 Dahua Road , Dongcheng District , Beijing 100730, P. R. China
| | - Chuanbao Zhang
- National Center for Clinical Laboratories, Beijing Engineering Research Center of Laboratory Medicine, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences , Chinese Academy of Medical Sciences and Peking Union Medical College. No. 1 Dahua Road , Dongcheng District , Beijing 100730, P. R. China
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3
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Gątarek P, Pawełczyk M, Jastrzębski K, Głąbiński A, Kałużna-Czaplińska J. Analytical methods used in the study of Parkinson's disease. Trends Analyt Chem 2019. [DOI: 10.1016/j.trac.2019.05.047] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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4
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Reduced levels of modified nucleosides in the urine of autistic children. Preliminary studies. Anal Biochem 2019; 571:62-67. [PMID: 30771338 DOI: 10.1016/j.ab.2019.02.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2019] [Revised: 02/11/2019] [Accepted: 02/12/2019] [Indexed: 12/31/2022]
Abstract
The aim of this study was to investigate and compare the levels of concentration of modified nucleosides in the urine of autistic and healthy children. The compounds have never been analyzed before. The levels of nucleosides in the urine of both groups were determined by validated high performance liquid chromatography coupled to mass spectrometry (LC-MS/MS) method using multiple reaction monitoring (MRM) mode. Chromatographic separation was achieved with HILIC column and tubercidin was used as the internal standard for the quantification of urinary nucleosides. The within run accuracy and precision ranged from 89 to 106% and from 0.8% to 4.9%, respectively. Lower levels of O-methylguanosine, 7-methylguanosine, 1-methyladenosine, 1-methylguanine, 7-methylguanine and 3-methyladenine in the urine of 22 children with autism, aged 3 to 16 were observed. The differences were not observed in 20 healthy volunteers, in a similar age group. These findings show that modified nucleosides there are metabolic disturbances and nutritional deficiencies in autistic children.
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Saha I, Wang EB, Parish CA, Ghosh K. Triphenylamine‐Based Open and Macrocyclic Receptors: A Study Towards Selectivite Recognition of Aliphatic Dicarboxylates. ChemistrySelect 2017. [DOI: 10.1002/slct.201700756] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Indrajit Saha
- Department of Chemistry University of Kalyani Nadia- 741235, Kalyani, West Bengal India
- Department of Chemistry Ramkrishna Mahavidyalaya Unakoti- 799277, Kailashahar, Tripura India
| | - Evan B. Wang
- Department of Chemistry University of Richmond VA-23173 US
| | | | - Kumaresh Ghosh
- Department of Chemistry University of Kalyani Nadia- 741235, Kalyani, West Bengal India
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Ye M, Zhang L, Xu P, Zhang R, Xu J, Wu X, Chen J, Zhou C, Yan X. Simultaneous analysis of ten low-molecular-mass organic acids in the tricarboxylic acid cycle and photorespiration pathway inThalassiosira pseudonanaat different growth stages. J Sep Sci 2016; 40:635-645. [DOI: 10.1002/jssc.201600852] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2016] [Revised: 10/30/2016] [Accepted: 11/09/2016] [Indexed: 01/18/2023]
Affiliation(s)
- Mengwei Ye
- Key Laboratory of Applied Marine Biotechnology; Ningbo University; Chinese Ministry of Education; Ningbo P.R. China
- Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture; Ningbo University; Ningbo P.R. China
| | - Lijing Zhang
- Zhejiang Pharmaceutical College; Ningbo P.R. China
| | - Panpan Xu
- Key Laboratory of Applied Marine Biotechnology; Ningbo University; Chinese Ministry of Education; Ningbo P.R. China
| | - Runtao Zhang
- Key Laboratory of Applied Marine Biotechnology; Ningbo University; Chinese Ministry of Education; Ningbo P.R. China
| | - Jilin Xu
- Key Laboratory of Applied Marine Biotechnology; Ningbo University; Chinese Ministry of Education; Ningbo P.R. China
| | - Xiaokai Wu
- Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture; Ningbo University; Ningbo P.R. China
| | - Juanjuan Chen
- Key Laboratory of Applied Marine Biotechnology; Ningbo University; Chinese Ministry of Education; Ningbo P.R. China
| | - Chengxu Zhou
- Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture; Ningbo University; Ningbo P.R. China
| | - Xiaojun Yan
- Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture; Ningbo University; Ningbo P.R. China
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Jóźwik J, Kałużna-Czaplińska J. Current Applications of Chromatographic Methods in the Study of Human Body Fluids for Diagnosing Disorders. Crit Rev Anal Chem 2016; 46:1-14. [DOI: 10.1080/10408347.2014.929487] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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8
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Mateus P, Delgado R, André V, Duarte MT. Dicarboxylate Recognition Properties of a Dinuclear Copper(II) Cryptate. Inorg Chem 2014; 54:229-40. [DOI: 10.1021/ic502230q] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Pedro Mateus
- Instituto de Tecnologia Química
e Biológica António Xavier, Universidade Nova de Lisboa, Avenida da República, 2780-157 Oeiras, Portugal
| | - Rita Delgado
- Instituto de Tecnologia Química
e Biológica António Xavier, Universidade Nova de Lisboa, Avenida da República, 2780-157 Oeiras, Portugal
| | - Vânia André
- Centro de Química
Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Avenida Rovisco Pais, 1049-001 Lisboa, Portugal
| | - M. Teresa Duarte
- Centro de Química
Estrutural, Instituto Superior Técnico, Universidade de Lisboa, Avenida Rovisco Pais, 1049-001 Lisboa, Portugal
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A fast and simple solid phase microextraction coupled with gas chromatography-triple quadrupole mass spectrometry method for the assay of urinary markers of glutaric acidemias. J Chromatogr A 2014; 1372C:253-259. [DOI: 10.1016/j.chroma.2014.10.069] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2014] [Revised: 09/29/2014] [Accepted: 10/24/2014] [Indexed: 11/17/2022]
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10
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Kałużna-Czaplińska J, Żurawicz E, Jóźwik J. Chromatographic techniques coupled with mass spectrometry for the determination of organic acids in the study of autism. J Chromatogr B Analyt Technol Biomed Life Sci 2014; 964:128-35. [DOI: 10.1016/j.jchromb.2013.10.026] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2013] [Revised: 10/11/2013] [Accepted: 10/12/2013] [Indexed: 10/26/2022]
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11
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Current applications of chromatographic methods for diagnosis and identification of potential biomarkers in cancer. Trends Analyt Chem 2014. [DOI: 10.1016/j.trac.2013.12.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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12
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Parastar H, Akvan N. Multivariate curve resolution based chromatographic peak alignment combined with parallel factor analysis to exploit second-order advantage in complex chromatographic measurements. Anal Chim Acta 2014; 816:18-27. [DOI: 10.1016/j.aca.2014.01.051] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2013] [Revised: 01/03/2014] [Accepted: 01/27/2014] [Indexed: 11/24/2022]
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13
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Peng J, Li L. Liquid–liquid extraction combined with differential isotope dimethylaminophenacyl labeling for improved metabolomic profiling of organic acids. Anal Chim Acta 2013; 803:97-105. [DOI: 10.1016/j.aca.2013.07.045] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2013] [Revised: 07/15/2013] [Accepted: 07/18/2013] [Indexed: 12/15/2022]
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Park NH, Hong JY, Shin HJ, Hong J. Comprehensive profiling analysis of bioamines and their acidic metabolites in human urine by gas chromatography/mass spectrometry combined with selective derivatization. J Chromatogr A 2013; 1305:234-43. [DOI: 10.1016/j.chroma.2013.07.003] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2013] [Revised: 06/24/2013] [Accepted: 07/01/2013] [Indexed: 11/26/2022]
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Regueiro J, Vallverdú-Queralt A, Simal-Gándara J, Estruch R, Lamuela-Raventós R. Development of a LC-ESI-MS/MS approach for the rapid quantification of main wine organic acids in human urine. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2013; 61:6763-8. [PMID: 23777193 DOI: 10.1021/jf401839g] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
The analysis of food components and their metabolome in urine has recently found a growing interest due their potential ability to reflect specific dietary intakes. In the present work, a fast, simple, and environmentally friendly method based on liquid chromatography coupled to electrospray ionization tandem mass spectrometry was developed for the analysis of main wine organic acids in human urine. The proposed method was evaluated in terms of linearity, precision, accuracy, and limits of detection. Quantitative recovery (96-102%) and satisfactory interday precision (RSD <6%) were achieved for all target compounds. To demonstrate the applicability of the method, urine samples from five male volunteers were analyzed before and after consumption of a single moderate dose (200 mL) of red wine. A significant increase (p < 0.01) in the urinary concentration of tartaric and malic acids was observed.
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Affiliation(s)
- Jorge Regueiro
- Nutrition and Bromatology Group, Analytical and Food Chemistry Department, Faculty of Food Science and Technology, Ourense Campus, University of Vigo , Ourense 32004, Spain
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Monteleone M, Naccarato A, Sindona G, Tagarelli A. A reliable and simple method for the assay of neuroendocrine tumor markers in human urine by solid-phase microextraction-gas chromatography-triple quadrupole mass spectrometry. Anal Chim Acta 2012; 759:66-73. [PMID: 23260678 DOI: 10.1016/j.aca.2012.11.017] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2012] [Revised: 11/06/2012] [Accepted: 11/10/2012] [Indexed: 10/27/2022]
Abstract
Homovanillic acid (HVA), vanylmandelic acid (VMA), and 5-hydroxyindoleacetic acid (5-HIAA) are the metabolites of some catecholamines such as epinephrine, nor-epinephrine, dopamine and serotonin and their quantification is used in the diagnosis and management of patients with neurocrine tumors. A novel approach in the assay of these biomarkers in human urine samples by solid phase microextraction (SPME) combined with gas chromatography-triple quadrupole mass spectrometry (GC-QqQ-MS) is presented. A preliminary derivatization with ethyl chloroformate/ethanol was used and the corresponding derivatives were then extracted by SPME in immersion mode. The performance of five SPME fibers and three chloroformates were evaluated in univariate mode and the best results were obtained using the polyacrylate fiber and ethyl chloroformate. The variables affecting the efficiency of SPME analysis were optimized by the multivariate approach of "Experimental design" and, in particular, a central composite design (CCD) was applied. The optimum working conditions in terms of response values were achieved by performing analysis at room temperature with addition of NaCl (9.5%) and with an extraction time of 25.8 min. Identification and quantification of analytes were carried out by using a gas chromatography-triple quadrupole mass spectrometry (GC-QqQ MS) system in multiple reaction monitoring (MRM) acquisition. An evaluation of all analytical parameters shows that the proposed method provides satisfactory results. Very good linearities were, in fact, achieved in the tested calibration ranges with correlation coefficient values >0.99 for all the analytes and accuracies and RSDs calculated for between-run and tested at concentrations of 1, 10, and 80 mg L(-1) were ranging from 91.3% to 106.6%, and from 0.5 to 8.9%, respectively. Moreover, the LOD values obtained can be considered very satisfactory (1.3, 0.046 and 24.3 μg L(-1) for HVA, VMA and 5-HIAA, respectively). The developed protocol represents, therefore, a simple, rapid and selective tool for assaying these acidic biomarkers in urine samples for neuroendocrine cancer diagnosis.
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Affiliation(s)
- Marcello Monteleone
- Dipartimento di Chimica, Università della Calabria, Via Pietro Bucci Cubo 12/C, I-87030 Arcavacata di Rende (CS), Italy
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