Object-based classification of wetland vegetation using very high-resolution unmanned air system imagery

Smallholder oil palm plantation sustainability assessment using multi-criteria analysis and unmanned aerial vehicles

Oil palm agriculture has caused extensive land cover and land use changes that have adversely affected tropical landscapes and ecosystems. However, monitoring and assessment of oil palm plantation areas to support sustainable management is costly and labour-intensive. This study used an unmanned aerial vehicles (UAV) to map smallholder farms and applied multi-criteria analysis to data generated from orthomosaics, to provide a set of sustainability indicators for the farms. Images were acquired from a UAV, with structure from motion (SfM) photogrammetry then used to produce orthomosaics and digital elevation models of the farm areas. Some of the inherent problems using high spatial resolution imagery for land cover classification were overcome by using texture analysis and geographic object-based image analysis (OBIA). Six spatially explicit environmental metrics were developed using multi-criteria analysis and used to generate sustainability indicator layers from the UAV data. The SfM and OBIA approach provided an accurate, high-resolution (~5 cm) image-based reconstruction of smallholder farm landscapes, with an overall classification accuracy of 89%. The multi-criteria analysis highlighted areas with lower sustainability values, which should be considered targets for adoption of sustainable management practices. The results of this work suggest that UAVs are a cost-effective tool for sustainability assessments of oil palm plantations, but there remains the need to plan surveys and image processing workflows carefully. Future work can build on our proposed approach, including the use of additional and/or alternative indicators developed through consultation with the oil palm industry stakeholders, to support certification schemes such as the Roundtable on Sustainable Palm Oil (RSPO).

Precise Quantification of Land Cover before and after Planned Disturbance Events with UAS-Derived Imagery

This paper introduces a detailed procedure to utilize the high temporal and spatial resolution capabilities of an unmanned aerial system (UAS) to document vegetation at regular intervals both before and after a planned disturbance, a key component in natural disturbance-based management (NDBM), which uses treatments such as harvest and prescribed burns toward the removal of vegetation fuel loads. We developed a protocol and applied it to timber harvest and prescribed burn events. Geographic image-based analysis (GEOBIA) was used for the classification of UAS orthomosaics. The land cover classes included (1) bare ground, (2) litter, (3) green vegetation, and (4) burned vegetation for the prairie burn site, and (1) mature canopy, (2) understory vegetation, and (3) bare ground for the timber harvest site. Sample datasets for both kinds of disturbances were used to train a support vector machine (SVM) classifier algorithm, which produced four land cover classifications for each site. Statistical analysis (a two-tailed t-test) indicated there was no significant difference in image classification efficacies between the two disturbance types. This research provides a framework to use UASs to assess land cover, which is valuable for supporting effective land management practices and ensuring the sustainability of land practices along with other planned disturbances, such as construction and mining.

Very High-Resolution Imagery and Machine Learning for Detailed Mapping of Riparian Vegetation and Substrate Types

Riparian zones fulfill diverse ecological and economic functions. Sustainable management requires detailed spatial information about vegetation and hydromorphological properties. In this study, we propose a machine learning classification workflow to map classes of the thematic levels Basic surface types (BA), Vegetation units (VE), Dominant stands (DO) and Substrate types (SU) based on multispectral imagery from an unmanned aerial system (UAS). A case study was carried out in Emmericher Ward on the river Rhine, Germany. The results showed that: (I) In terms of overall accuracy, classification results decreased with increasing detail of classes from BA (88.9%) and VE (88.4%) to DO (74.8%) or SU (62%), respectively. (II) The use of Support Vector Machines and Extreme Gradient Boost algorithms did not increase classification performance in comparison to Random Forest. (III) Based on probability maps, classification performance was lower in areas of shaded vegetation and in the transition zones. (IV) In order to cover larger areas, a gyrocopter can be used applying the same workflow and achieving comparable results as by UAS for thematic levels BA, VE and homogeneous classes covering larger areas. The generated classification maps are a valuable tool for ecologically integrated water management.

A Review of Landcover Classification with Very-High Resolution Remotely Sensed Optical Images—Analysis Unit, Model Scalability and Transferability

As an important application in remote sensing, landcover classification remains one of the most challenging tasks in very-high-resolution (VHR) image analysis. As the rapidly increasing number of Deep Learning (DL) based landcover methods and training strategies are claimed to be the state-of-the-art, the already fragmented technical landscape of landcover mapping methods has been further complicated. Although there exists a plethora of literature review work attempting to guide researchers in making an informed choice of landcover mapping methods, the articles either focus on the review of applications in a specific area or revolve around general deep learning models, which lack a systematic view of the ever advancing landcover mapping methods. In addition, issues related to training samples and model transferability have become more critical than ever in an era dominated by data-driven approaches, but these issues were addressed to a lesser extent in previous review articles regarding remote sensing classification. Therefore, in this paper, we present a systematic overview of existing methods by starting from learning methods and varying basic analysis units for landcover mapping tasks, to challenges and solutions on three aspects of scalability and transferability with a remote sensing classification focus including (1) sparsity and imbalance of data; (2) domain gaps across different geographical regions; and (3) multi-source and multi-view fusion. We discuss in detail each of these categorical methods and draw concluding remarks in these developments and recommend potential directions for the continued endeavor.

Improved Use of Drone Imagery for Malaria Vector Control through Technology-Assisted Digitizing (TAD)

Drones have the potential to revolutionize malaria vector control initiatives through rapid and accurate mapping of potential malarial mosquito larval habitats to help direct field Larval Source Management (LSM) efforts. However, there are no clear recommendations on how these habitats can be extracted from drone imagery in an operational context. This paper compares the results of two mapping approaches: supervised image classification using machine learning and Technology-Assisted Digitising (TAD) mapping that employs a new region growing tool suitable for non-experts. These approaches were applied concurrently to drone imagery acquired at seven sites in Zanzibar, United Republic of Tanzania. Whilst the two approaches were similar in processing time, the TAD approach significantly outperformed the supervised classification approach at all sites (t = 5.1, p < 0.01). Overall accuracy scores (mean overall accuracy 62%) suggest that a supervised classification approach is unsuitable for mapping potential malarial mosquito larval habitats in Zanzibar, whereas the TAD approach offers a simple and accurate (mean overall accuracy 96%) means of mapping these complex features. We recommend that this approach be used alongside targeted ground-based surveying (i.e., in areas inappropriate for drone surveying) for generating precise and accurate spatial intelligence to support operational LSM programmes.

Object-Based Wetland Vegetation Classification Using Multi-Feature Selection of Unoccupied Aerial Vehicle RGB Imagery

Wetland vegetation is an important component of wetland ecosystems and plays a crucial role in the ecological functions of wetland environments. Accurate distribution mapping and dynamic change monitoring of vegetation are essential for wetland conservation and restoration. The development of unoccupied aerial vehicles (UAVs) provides an efficient and economic platform for wetland vegetation classification. In this study, we evaluated the feasibility of RGB imagery obtained from the DJI Mavic Pro for wetland vegetation classification at the species level, with a specific application to Honghu, which is listed as a wetland of international importance. A total of ten object-based image analysis (OBIA) scenarios were designed to assess the contribution of five machine learning algorithms to the classification accuracy, including Bayes, K-nearest neighbor (KNN), support vector machine (SVM), decision tree (DT), and random forest (RF), multi-feature combinations and feature selection implemented by the recursive feature elimination algorithm (RFE). The overall accuracy and kappa coefficient were compared to determine the optimal classification method. The main results are as follows: (1) RF showed the best performance among the five machine learning algorithms, with an overall accuracy of 89.76% and kappa coefficient of 0.88 when using 53 features (including spectral features (RGB bands), height information, vegetation indices, texture features, and geometric features) for wetland vegetation classification. (2) The RF model constructed by only spectral features showed poor classification results, with an overall accuracy of 73.66% and kappa coefficient of 0.70. By adding height information, VIs, texture features, and geometric features to construct the RF model layer by layer, the overall accuracy was improved by 8.78%, 3.41%, 2.93%, and 0.98%, respectively, demonstrating the importance of multi-feature combinations. (3) The contribution of different types of features to the RF model was not equal, and the height information was the most important for wetland vegetation classification, followed by the vegetation indices. (4) The RFE algorithm effectively reduced the number of original features from 53 to 36, generating an optimal feature subset for wetland vegetation classification. The RF based on the feature selection result of RFE (RF-RFE) had the best performance in ten scenarios, and provided an overall accuracy of 90.73%, which was 0.97% higher than the RF without feature selection. The results illustrate that the combination of UAV-based RGB imagery and the OBIA approach provides a straightforward, yet powerful, approach for high-precision wetland vegetation classification at the species level, in spite of limited spectral information. Compared with satellite data or UAVs equipped with other types of sensors, UAVs with RGB cameras are more cost efficient and convenient for wetland vegetation monitoring and mapping.

Remote Sensing of Wetlands in the Prairie Pothole Region of North America

The Prairie Pothole Region (PPR) of North America is an extremely important habitat for a diverse range of wetland ecosystems that provide a wealth of socio-economic value. This paper describes the ecological characteristics and importance of PPR wetlands and the use of remote sensing for mapping and monitoring applications. While there are comprehensive reviews for wetland remote sensing in recent publications, there is no comprehensive review about the use of remote sensing in the PPR. First, the PPR is described, including the wetland classification systems that have been used, the water regimes that control the surface water and water levels, and the soil and vegetation characteristics of the region. The tools and techniques that have been used in the PPR for analyses of geospatial data for wetland applications are described. Field observations for ground truth data are critical for good validation and accuracy assessment of the many products that are produced. Wetland classification approaches are reviewed, including Decision Trees, Machine Learning, and object versus pixel-based approaches. A comprehensive description of the remote sensing systems and data that have been employed by various studies in the PPR is provided. A wide range of data can be used for various applications, including passive optical data like aerial photographs or satellite-based, Earth-observation data. Both airborne and spaceborne lidar studies are described. A detailed description of Synthetic Aperture RADAR (SAR) data and research are provided. The state of the art is the use of multi-source data to achieve higher accuracies and hybrid approaches. Digital Surface Models are also being incorporated in geospatial analyses to separate forest and shrub and emergent systems based on vegetation height. Remote sensing provides a cost-effective mechanism for mapping and monitoring PPR wetlands, especially with the logistical difficulties and cost of field-based methods. The wetland characteristics of the PPR dictate the need for high resolution in both time and space, which is increasingly possible with the numerous and increasing remote sensing systems available and the trend to open-source data and tools. The fusion of multi-source remote sensing data via state-of-the-art machine learning is recommended for wetland applications in the PPR. The use of such data promotes flexibility for sensor addition, subtraction, or substitution as a function of application needs and potential cost restrictions. This is important in the PPR because of the challenges related to the highly dynamic nature of this unique region.

The application of drones for mosquito larval habitat identification in rural environments: a practical approach for malaria control?

BACKGROUND

Spatio-temporal trends in mosquito-borne diseases are driven by the locations and seasonality of larval habitat. One method of disease control is to decrease the mosquito population by modifying larval habitat, known as larval source management (LSM). In malaria control, LSM is currently considered impractical in rural areas due to perceived difficulties in identifying target areas. High resolution drone mapping is being considered as a practical solution to address this barrier. In this paper, the authors' experiences of drone-led larval habitat identification in Malawi were used to assess the feasibility of this approach.

METHODS

Drone mapping and larval surveys were conducted in Kasungu district, Malawi between 2018 and 2020. Water bodies and aquatic vegetation were identified in the imagery using manual methods and geographical object-based image analysis (GeoOBIA) and the performances of the classifications were compared. Further, observations were documented on the practical aspects of capturing drone imagery for informing malaria control including cost, time, computing, and skills requirements. Larval sampling sites were characterized by biotic factors visible in drone imagery and generalized linear mixed models were used to determine their association with larval presence.

RESULTS

Imagery covering an area of 8.9 km² across eight sites was captured. Larval habitat characteristics were successfully identified using GeoOBIA on images captured by a standard camera (median accuracy = 98%) with no notable improvement observed after incorporating data from a near-infrared sensor. This approach however required greater processing time and technical skills compared to manual identification. Larval samples captured from 326 sites confirmed that drone-captured characteristics, including aquatic vegetation presence and type, were significantly associated with larval presence.

CONCLUSIONS

This study demonstrates the potential for drone-acquired imagery to support mosquito larval habitat identification in rural, malaria-endemic areas, although technical challenges were identified which may hinder the scale up of this approach. Potential solutions have however been identified, including strengthening linkages with the flourishing drone industry in countries such as Malawi. Further consultations are therefore needed between experts in the fields of drones, image analysis and vector control are needed to develop more detailed guidance on how this technology can be most effectively exploited in malaria control.

Using Uncrewed Aerial Vehicles for Identifying the Extent of Invasive Phragmites australis in Treatment Areas Enrolled in an Adaptive Management Program

Higher spatial and temporal resolutions of remote sensing data are likely to be useful for ecological monitoring efforts. There are many different treatment approaches for the introduced European genotype of Phragmites australis, and adaptive management principles are being integrated in at least some long-term monitoring efforts. In this paper, we investigated how natural color and a smaller set of near-infrared (NIR) images collected with low-cost uncrewed aerial vehicles (UAVs) could help quantify the aboveground effects of management efforts at 20 sites enrolled in the Phragmites Adaptive Management Framework (PAMF) spanning the coastal Laurentian Great Lakes region. We used object-based image analysis and field ground truth data to classify the Phragmites and other cover types present at each of the sites and calculate the percent cover of Phragmites, including whether it was alive or dead, in the UAV images. The mean overall accuracy for our analysis with natural color data was 91.7% using four standardized classes (Live Phragmites, Dead Phragmites, Other Vegetation, Other Non-vegetation). The Live Phragmites class had a mean user’s accuracy of 90.3% and a mean producer’s accuracy of 90.1%, and the Dead Phragmites class had a mean user’s accuracy of 76.5% and a mean producer’s accuracy of 85.2% (not all classes existed at all sites). These results show that UAV-based imaging and object-based classification can be a useful tool to measure the extent of dead and live Phragmites at a series of sites undergoing management. Overall, these results indicate that UAV sensing appears to be a useful tool for identifying the extent of Phragmites at management sites.

Monitoring the Efficacy of Crested Floatingheart (Nymphoides cristata) Management with Object-Based Image Analysis of UAS Imagery

This study investigates the use of unmanned aerial systems (UAS) mapping for monitoring the efficacy of invasive aquatic vegetation (AV) management on a floating-leaved AV species, Nymphoides cristata (CFH). The study site consists of 48 treatment plots (TPs). Based on six unique flights over two days at three different flight altitudes while using both a multispectral and RGB sensor, accuracy assessment of the final object-based image analysis (OBIA)-derived classified images yielded overall accuracies ranging from 89.6% to 95.4%. The multispectral sensor was significantly more accurate than the RGB sensor at measuring CFH areal coverage within each TP only with the highest multispectral, spatial resolution (2.7 cm/pix at 40 m altitude). When measuring response in the AV community area between the day of treatment and two weeks after treatment, there was no significant difference between the temporal area change from the reference datasets and the area changes derived from either the RGB or multispectral sensor. Thus, water resource managers need to weigh small gains in accuracy from using multispectral sensors against other operational considerations such as the additional processing time due to increased file sizes, higher financial costs for equipment procurements, and longer flight durations in the field when operating multispectral sensors.

Monitoring Urban Green Infrastructure Changes and Impact on Habitat Connectivity Using High-Resolution Satellite Data

In recent decades, the City of Stockholm, Sweden, has grown substantially and is now the largest city in Scandinavia. Recent urban growth is placing pressure on green areas within and around the city. In order to protect biodiversity and ecosystem services, green infrastructure is part of Stockholm municipal planning. This research quantifies land-cover change in the City of Stockholm between 2003 and 2018 and examines what impact urban growth has had on its green infrastructure. Two 2018 WorldView-2 images and three 2003 QuickBird-2 images were used to produce classifications of 11 land-cover types using object-based image analysis and a support vector machine algorithm with spectral, geometric and texture features. The classification accuracies reached over 90% and the results were used in calculations and comparisons to determine the impact of urban growth in Stockholm between 2003 and 2018, including the generation of land-cover change statistics in relation to administrative boundaries and green infrastructure. For components of the green infrastructure, i.e., habitat networks for selected sensitive species, habitat network analysis for the European crested tit (Lophophanes cristatus) and common toad (Bufo bufo) was performed. Between 2003 and 2018, urban areas increased by approximately 4% while green areas decreased by 2% in comparison with their 2003 areal amounts. The most significant urban growth occurred through expansion of the transport network, paved surfaces and construction areas which increased by 12%, mainly at the expense of grassland and coniferous forest. Examination of urban growth within the green infrastructure indicated that most land area was lost in dispersal zones (28 ha) while the highest percent change was within habitat for species of conservation concern (14%). The habitat network analysis revealed that overall connectivity decreased slightly through patch fragmentation and areal loss mainly caused by road expansion on the outskirts of the city. The habitat network analysis also revealed which habitat areas are well-connected and which are most vulnerable. These results can assist policymakers and planners in their efforts to ensure sustainable urban development including sustaining biodiversity in the City of Stockholm.

Remote Sensing of Boreal Wetlands 2: Methods for Evaluating Boreal Wetland Ecosystem State and Drivers of Change

The following review is the second part of a two part series on the use of remotely sensed data for quantifying wetland extent and inferring or measuring condition for monitoring drivers of change on wetland environments. In the first part, we introduce policy makers and non-users of remotely sensed data with an effective feasibility guide on how data can be used. In the current review, we explore the more technical aspects of remotely sensed data processing and analysis using case studies within the literature. Here we describe: (a) current technologies used for wetland assessment and monitoring; (b) the latest algorithmic developments for wetland assessment; (c) new technologies; and (d) a framework for wetland sampling in support of remotely sensed data collection. Results illustrate that high or fine spatial resolution pixels (≤10 m) are critical for identifying wetland boundaries and extent, and wetland class, form and type, but are not required for all wetland sizes. Average accuracies can be up to 11% better (on average) than medium resolution (11–30 m) data pixels when compared with field validation. Wetland size is also a critical factor such that large wetlands may be almost as accurately classified using medium-resolution data (average = 76% accuracy, stdev = 21%). Decision-tree and machine learning algorithms provide the most accurate wetland classification methods currently available, however, these also require sampling of all permutations of variability. Hydroperiod accuracy, which is dependent on instantaneous water extent for single time period datasets does not vary greatly with pixel resolution when compared with field data (average = 87%, 86%) for high and medium resolution pixels, respectively. The results of this review provide users with a guideline for optimal use of remotely sensed data and suggested field methods for boreal and global wetland studies.

Remote Sensing of Boreal Wetlands 1: Data Use for Policy and Management

Wetlands have and continue to undergo rapid environmental and anthropogenic modification and change to their extent, condition, and therefore, ecosystem services. In this first part of a two-part review, we provide decision-makers with an overview on the use of remote sensing technologies for the ‘wise use of wetlands’, following Ramsar Convention protocols. The objectives of this review are to provide: (1) a synthesis of the history of remote sensing of wetlands, (2) a feasibility study to quantify the accuracy of remotely sensed data products when compared with field data based on 286 comparisons found in the literature from 209 articles, (3) recommendations for best approaches based on case studies, and (4) a decision tree to assist users and policymakers at numerous governmental levels and industrial agencies to identify optimal remote sensing approaches based on needs, feasibility, and cost. We argue that in order for remote sensing approaches to be adopted by wetland scientists, land-use managers, and policymakers, there is a need for greater understanding of the use of remote sensing for wetland inventory, condition, and underlying processes at scales relevant for management and policy decisions. The literature review focuses on boreal wetlands primarily from a Canadian perspective, but the results are broadly applicable to policymakers and wetland scientists globally, providing knowledge on how to best incorporate remotely sensed data into their monitoring and measurement procedures. This is the first review quantifying the accuracy and feasibility of remotely sensed data and data combinations needed for monitoring and assessment. These include, baseline classification for wetland inventory, monitoring through time, and prediction of ecosystem processes from individual wetlands to a national scale.

Current Practices in UAS-based Environmental Monitoring

With the increasing role that unmanned aerial systems (UAS) are playing in data collection for environmental studies, two key challenges relate to harmonizing and providing standardized guidance for data collection, and also establishing protocols that are applicable across a broad range of environments and conditions. In this context, a network of scientists are cooperating within the framework of the Harmonious Project to develop and promote harmonized mapping strategies and disseminate operational guidance to ensure best practice for data collection and interpretation. The culmination of these efforts is summarized in the present manuscript. Through this synthesis study, we identify the many interdependencies of each step in the collection and processing chain, and outline approaches to formalize and ensure a successful workflow and product development. Given the number of environmental conditions, constraints, and variables that could possibly be explored from UAS platforms, it is impractical to provide protocols that can be applied universally under all scenarios. However, it is possible to collate and systematically order the fragmented knowledge on UAS collection and analysis to identify the best practices that can best ensure the streamlined and rigorous development of scientific products.

Review and Evaluation of Deep Learning Architectures for Efficient Land Cover Mapping with UAS Hyper-Spatial Imagery: A Case Study Over a Wetland

Deep learning has already been proved as a powerful state-of-the-art technique for many image understanding tasks in computer vision and other applications including remote sensing (RS) image analysis. Unmanned aircraft systems (UASs) offer a viable and economical alternative to a conventional sensor and platform for acquiring high spatial and high temporal resolution data with high operational flexibility. Coastal wetlands are among some of the most challenging and complex ecosystems for land cover prediction and mapping tasks because land cover targets often show high intra-class and low inter-class variances. In recent years, several deep convolutional neural network (CNN) architectures have been proposed for pixel-wise image labeling, commonly called semantic image segmentation. In this paper, some of the more recent deep CNN architectures proposed for semantic image segmentation are reviewed, and each model’s training efficiency and classification performance are evaluated by training it on a limited labeled image set. Training samples are provided using the hyper-spatial resolution UAS imagery over a wetland area and the required ground truth images are prepared by manual image labeling. Experimental results demonstrate that deep CNNs have a great potential for accurate land cover prediction task using UAS hyper-spatial resolution images. Some simple deep learning architectures perform comparable or even better than complex and very deep architectures with remarkably fewer training epochs. This performance is especially valuable when limited training samples are available, which is a common case in most RS applications.

Quantifying Intertidal Habitat Relative Coverage in a Florida Estuary Using UAS Imagery and GEOBIA

Intertidal habitats like oyster reefs and salt marshes provide vital ecosystem services including shoreline erosion control, habitat provision, and water filtration. However, these systems face significant global change as a result of a combination of anthropogenic stressors like coastal development and environmental stressors such as sea-level rise and disease. Traditional intertidal habitat monitoring techniques are cost and time-intensive, thus limiting how frequently resources are mapped in a way that is often insufficient to make informed management decisions. Unoccupied aircraft systems (UASs) have demonstrated the potential to mitigate these costs as they provide a platform to rapidly, safely, and inexpensively collect data in coastal areas. In this study, a UAS was used to survey intertidal habitats along the Gulf of Mexico coastline in Florida, USA. The structure from motion photogrammetry techniques were used to generate an orthomosaic and a digital surface model from the UAS imagery. These products were used in a geographic object-based image analysis (GEOBIA) workflow to classify mudflat, salt marsh, and oyster reef habitats. GEOBIA allows for a more informed classification than traditional techniques by providing textural and geometric context to habitat covers. We developed a ruleset to allow for a repeatable workflow, further decreasing the temporal cost of monitoring. The classification produced an overall accuracy of 79% in classifying habitats in a coastal environment with little spectral and textural separability, indicating that GEOBIA can differentiate intertidal habitats. This method allows for effective monitoring that can inform management and restoration efforts.

Multi-scale analysis of hydrological connectivity and plant response in the Yellow River Delta

The Yellow River Delta is one of the International Important Wetlands on the west coastline of the Pacific Ocean in China. Despite its importance for regional and global ecological security, it is vulnerable because of human activities and climate change. Local government is trying to identify a more efficient way to conserve the delta thereby reducing a potential environmental crisis. The framework of hydrological connectivity provides a new perspective to study hydrological related ecological processes, while the method is highly exclusive because of environment and scale heterogeneity. This study collaborated with managers to develop a new algorithm to parameterize the hydrological connectivity on plot, point and landscape scales. Then the interspecific and conspecific structures of two dominate species (Phragmites communis and Suaeda salsa) are linked to these indices. The results show: (1) According to the point and plot scale results, AP (semi-artificial pond) and IF (intertidal flat) has the strongest hydrological connectivity followed by TM (tidal marsh). The average positive point-scale index values in AP, IF RS (river side wetland) and TM are 0.610, 0.495, 1.162 and 1.217 and the average plot-scale index values in AP, IF RS and TM are 1.53, 0.87, 0.48 0.55. At the landscape scale, index values show high collinearity with plot density and lack of hydrological significance because of low data resolution and scale effects. (2) At the individual level, P. communis and S. salsa showed a higher interspecific and conspecific competitive strength to respond to environmental stress in the weak hydrological connectivity area. (3) At the community level, in higher salinity wetland classes, biomass, plant coverage and biodiversity showed a positive linear correlation with plot-scale indices. Future study will improve the current parametrization method at the landscape scale and reveal the response of other important plant species to hydrological connectivity in this area.

Photophysiology and Spectroscopy of Sun and Shade Leaves of Phragmites australis and the Effect on Patches of Different Densities

Remote sensing of vegetation has largely been revolving around the measurement of passive or active electromagnetic radiation of the top of the canopy. Nevertheless, plants hold a vertical structure and different processes and intensities take place within a plant organism depending on the environmental conditions. One of the main inputs for photosynthesis is photosynthetic active radiation (PAR) and a few studies have taken into account the effect of the qualitative and quantitative changes of the available PAR within the plants canopies. Mostly large plants (trees, shrubs) are affected by this phenomena, while signs of it could be observed in dense monocultures, too. Lake Balaton is a large lake with 12 km2 dense reed stands, some of which have been suffering from reed die-back; consequently, the reed density and stress condition exhibit a vertical PAR variability within the canopy due to the structure and condition of the plants but also a horizontal variability attributed to the reedbed’s heterogeneous density. In this study we investigate the expression of photosynthetic and spectroscopic parameters in different PAR conditions. We concentrate on chlorophyll fluorescence as this is an early-stage indicator of stress manifestation in plants. We first investigate how these parameters differ across leaf samples which are exposed to a higher degree of PAR variability due to their vertical position in the reed culm (sun and shade leaves). In the second part, we concentrate on how the same parameters exhibit in reed patches of different densities. We then look into hyperspectral regions through graphs of coefficient of determination and associate the former with the physiological parameters. We report on the large variability found from measurements taken at different parts of the canopy and the association with spectral regions in the visible and near-infrared domain. We find that at low irradiance plants increase their acclimation to low light conditions. Plant density at Phragmites stands affects the vertical light attenuation and consequently the photophysiological response of basal leaves. Moreover, the hyperspectral response from the sun and shade leaves has been found to differ; charts of the coefficient of determination indicate that the spectral region around the red-edge inflection point for each case of sun and shade leaves correlate strongly with ETRmax and α. When analysing the data cumulatively, independent of their vertical position within the stand, we found correlations of R2 = 0.65 (band combination 696 and 651) and R2 = 0.61 (band combination 636 and 642) for the ETRmax and α, respectively.

The Impact of Spatial Resolution on the Classification of Vegetation Types in Highly Fragmented Planting Areas Based on Unmanned Aerial Vehicle Hyperspectral Images

Fine classification of vegetation types has always been the focus and difficulty in the application field of remote sensing. Unmanned Aerial Vehicle (UAV) sensors and platforms have become important data sources in various application fields due to their high spatial resolution and flexibility. Especially, UAV hyperspectral images can play a significant role in the fine classification of vegetation types. However, it is not clear how the ultrahigh resolution UAV hyperspectral images react in the fine classification of vegetation types in highly fragmented planting areas, and how the spatial resolution variation of UAV images will affect the classification accuracy. Based on UAV hyperspectral images obtained from a commercial hyperspectral imaging sensor (S185) onboard a UAV platform, this paper examines the impact of spatial resolution on the classification of vegetation types in highly fragmented planting areas in southern China by aggregating 0.025 m hyperspectral image to relatively coarse spatial resolutions (0.05, 0.1, 0.25, 0.5, 1, 2.5 m). The object-based image analysis (OBIA) method was used and the effects of several segmentation scale parameters and different number of features were discussed. Finally, the classification accuracies from 84.3% to 91.3% were obtained successfully for multi-scale images. The results show that with the decrease of spatial resolution, the classification accuracies show a stable and slight fluctuation and then gradually decrease since the 0.5 m spatial resolution. The best classification accuracy does not occur in the original image, but at an intermediate level of resolution. The study also proves that the appropriate feature parameters vary at different scales. With the decrease of spatial resolution, the importance of vegetation index features has increased, and that of textural features shows an opposite trend; the appropriate segmentation scale has gradually decreased, and the appropriate number of features is 30 to 40. Therefore, it is of vital importance to select appropriate feature parameters for images in different scales so as to ensure the accuracy of classification.

UAS for Wetland Mapping and Hydrological Modeling

The miniaturization and affordable production of integrated microelectronics have improved in recent years, making unmanned aerial systems (UAS) accessible to consumers and igniting their interest. Researchers have proposed UAS-based solutions for almost any conceivable problem, but the greatest impact will likely be in applications that exploit the unique advantages of the technology: work in dangerous or difficult-to-access areas, high spatial resolution and/or frequent measurements of environmental phenomena, and deployment of novel sensing technology over small to moderate spatial scales. Examples of such applications may be the identification of wetland areas and use of high-resolution spatial data for hydrological modeling. However, because of the large—and growing—assortment of aircraft and sensors available on the market, an evolving regulatory environment, and limited practical guidance or examples of wetland mapping with UAS, it has been difficult to confidently devise or recommend UAS-based monitoring strategies for these applications. This paper provides a comprehensive review of UAS hardware, software, regulations, scientific applications, and data collection/post-processing procedures that are relevant for wetland monitoring and hydrological modeling.

A comparison of drone imagery and ground-based methods for estimating the extent of habitat destruction by lesser snow geese (Anser caerulescens caerulescens) in La Pérouse Bay

Lesser snow goose (Anser caerulescens caerulescens) populations have dramatically altered vegetation communities through increased foraging pressure. In remote regions, regular habitat assessments are logistically challenging and time consuming. Drones are increasingly being used by ecologists to conduct habitat assessments, but reliance on georeferenced data as ground truth may not always be feasible. We estimated goose habitat degradation using photointerpretation of drone imagery and compared estimates to those made with ground-based linear transects. In July 2016, we surveyed five study plots in La Pérouse Bay, Manitoba, to evaluate the effectiveness of a fixed-wing drone with simple Red Green Blue (RGB) imagery for evaluating habitat degradation by snow geese. Ground-based land cover data was collected and grouped into barren, shrub, or non-shrub categories. We compared estimates between ground-based transects and those made from unsupervised classification of drone imagery collected at altitudes of 75, 100, and 120 m above ground level (ground sampling distances of 2.4, 3.2, and 3.8 cm respectively). We found large time savings during the data collection step of drone surveys, but these savings were ultimately lost during imagery processing. Based on photointerpretation, overall accuracy of drone imagery was generally high (88.8% to 92.0%) and Kappa coefficients were similar to previously published habitat assessments from drone imagery. Mixed model estimates indicated 75m drone imagery overestimated barren (F2,182 = 100.03, P < 0.0001) and shrub classes (F2,182 = 160.16, P < 0.0001) compared to ground estimates. Inconspicuous graminoid and forb species (non-shrubs) were difficult to detect from drone imagery and were underestimated compared to ground-based transects (F2,182 = 843.77, P < 0.0001). Our findings corroborate previous findings, and that simple RGB imagery is useful for evaluating broad scale goose damage, and may play an important role in measuring habitat destruction by geese and other agents of environmental change.

Identifying Salt Marsh Shorelines from Remotely Sensed Elevation Data and Imagery

Salt marshes are valuable ecosystems that are vulnerable to lateral erosion, submergence, and internal disintegration due to sea level rise, storms, and sediment deficits. Because many salt marshes are losing area in response to these factors, it is important to monitor their lateral extent at high resolution over multiple timescales. In this study we describe two methods to calculate the location of the salt marsh shoreline. The marsh edge from elevation data (MEED) method uses remotely sensed elevation data to calculate an objective proxy for the shoreline of a salt marsh. This proxy is the abrupt change in elevation that usually characterizes the seaward edge of a salt marsh, designated the “marsh scarp.” It is detected as the maximum slope along a cross-shore transect between mean high water and mean tide level. The method was tested using lidar topobathymetric and photogrammetric elevation data from Massachusetts, USA. The other method to calculate the salt marsh shoreline is the marsh edge by image processing (MEIP) method which finds the unvegetated/vegetated line. This method applies image classification techniques to multispectral imagery and elevation datasets for edge detection. The method was tested using aerial imagery and coastal elevation data from the Plum Island Estuary in Massachusetts, USA. Both methods calculate a line that closely follows the edge of vegetation seen in imagery. The two methods were compared to each other using high resolution unmanned aircraft systems (UAS) data, and to a heads-up digitized shoreline. The root-mean-square deviation was 0.6 meters between the two methods, and less than 0.43 meters from the digitized shoreline. The MEIP method was also applied to a lower resolution dataset to investigate the effect of horizontal resolution on the results. Both methods provide an accurate, efficient, and objective way to track salt marsh shorelines with spatially intensive data over large spatial scales, which is necessary to evaluate geomorphic change and wetland vulnerability.

Mapping Invasive Phragmites australis in the Old Woman Creek Estuary Using UAV Remote Sensing and Machine Learning Classifiers

Unmanned aerial vehicles (UAV) are increasingly used for spatiotemporal monitoring of invasive plants in coastal wetlands. Early identification of invasive species is necessary in planning, restoring, and managing wetlands. This study assessed the effectiveness of UAV technology to identify invasive Phragmites australis in the Old Woman Creek (OWC) estuary using machine learning (ML) algorithms: Neural network (NN), support vector machine (SVM), and k-nearest neighbor (kNN). The ML algorithms were compared with the parametric maximum likelihood classifier (MLC) using pixel- and object-based methods. Pixel-based NN was identified as the best classifier with an overall accuracy of 94.80% and the lowest error of omission of 1.59%, the outcome desirable for effective eradication of Phragmites. The results were reached combining Sequoia multispectral imagery (green, red, red edge, and near-infrared bands) combined with the canopy height model (CHM) acquired in the mid-growing season and normalized difference vegetation index (NDVI) acquired later in the season. The sensitivity analysis, using various vegetation indices, image texture, CHM, and principal components (PC), demonstrated the impact of various feature layers on the classifiers. The study emphasizes the necessity of a suitable sampling and cross-validation methods, as well as the importance of optimum classification parameters.

Drones for Conservation in Protected Areas: Present and Future

Park managers call for cost-effective and innovative solutions to handle a wide variety of environmental problems that threaten biodiversity in protected areas. Recently, drones have been called upon to revolutionize conservation and hold great potential to evolve and raise better-informed decisions to assist management. Despite great expectations, the benefits that drones could bring to foster effectiveness remain fundamentally unexplored. To address this gap, we performed a literature review about the use of drones in conservation. We selected a total of 256 studies, of which 99 were carried out in protected areas. We classified the studies in five distinct areas of applications: “wildlife monitoring and management”; “ecosystem monitoring”; “law enforcement”; “ecotourism”; and “environmental management and disaster response”. We also identified specific gaps and challenges that would allow for the expansion of critical research or monitoring. Our results support the evidence that drones hold merits to serve conservation actions and reinforce effective management, but multidisciplinary research must resolve the operational and analytical shortcomings that undermine the prospects for drones integration in protected areas.

An Object-Based Image Analysis Workflow for Monitoring Shallow-Water Aquatic Vegetation in Multispectral Drone Imagery

High-resolution drone aerial surveys combined with object-based image analysis are transforming our capacity to monitor and manage aquatic vegetation in an era of invasive species. To better exploit the potential of these technologies, there is a need to develop more efficient and accessible analysis workflows and focus more efforts on the distinct challenge of mapping submerged vegetation. We present a straightforward workflow developed to monitor emergent and submerged invasive water soldier (Stratiotes aloides) in shallow waters of the Trent-Severn Waterway in Ontario, Canada. The main elements of the workflow are: (1) collection of radiometrically calibrated multispectral imagery including a near-infrared band; (2) multistage segmentation of the imagery involving an initial separation of above-water from submerged features; and (3) automated classification of features with a supervised machine-learning classifier. The approach yielded excellent classification accuracy for emergent features (overall accuracy = 92%; kappa = 88%; water soldier producer’s accuracy = 92%; user’s accuracy = 91%) and good accuracy for submerged features (overall accuracy = 84%; kappa = 75%; water soldier producer’s accuracy = 71%; user’s accuracy = 84%). The workflow employs off-the-shelf graphical software tools requiring no programming or coding, and could therefore be used by anyone with basic GIS and image analysis skills for a potentially wide variety of aquatic vegetation monitoring operations.

Quantitative assessment of urban wetland dynamics using high spatial resolution satellite imagery between 2000 and 2013

Accurate and timely information describing urban wetland resources and their changes over time, especially in rapidly urbanizing areas, is becoming more important. We applied an object-based image analysis and nearest neighbour classifier to map and monitor changes in land use/cover using multi-temporal high spatial resolution satellite imagery in an urban wetland area (Hangzhou Xixi Wetland) from 2000, 2005, 2007, 2009 and 2013. The overall eight-class classification accuracies averaged 84.47% for the five years. The maps showed that between 2000 and 2013 the amount of non-wetland (urban) area increased by approximately 100%. Herbaceous (32.22%), forest (29.57%) and pond (23.85%) are the main land-cover types that changed to non-wetland, followed by cropland (6.97%), marsh (4.04%) and river (3.35%). In addition, the maps of change patterns showed that urban wetland loss is mainly distributed west and southeast of the study area due to real estate development, and the greatest loss of urban wetlands occurred from 2007 to 2013. The results demonstrate the advantages of using multi-temporal high spatial resolution satellite imagery to provide an accurate, economical means to map and analyse changes in land use/cover over time and the ability to use the results as inputs to urban wetland management and policy decisions.