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Oliveira LCG, Ramos PL, Marem A, Kondo MY, Rocha RCS, Bertolini T, Silveira MAV, da Cruz JB, de Vasconcellos SP, Juliano L, Okamoto DN. Halotolerant bacteria in the São Paulo Zoo composting process and their hydrolases and bioproducts. Braz J Microbiol 2015; 46:347-54. [PMID: 26273248 PMCID: PMC4507525 DOI: 10.1590/s1517-838246220130316] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2013] [Accepted: 08/15/2014] [Indexed: 01/14/2023] Open
Abstract
Halophilic microorganisms are able to grow in the presence of salt and are also
excellent source of enzymes and biotechnological products, such as
exopolysaccharides (EPSs) and polyhydroxyalkanoates (PHAs). Salt-tolerant
bacteria were screened in the Organic Composting Production Unit (OCPU) of São
Paulo Zoological Park Foundation, which processes 4 ton/day of organic residues
including plant matter from the Atlantic Rain Forest, animal manure and
carcasses and mud from water treatment. Among the screened microorganisms, eight
halotolerant bacteria grew at NaCl concentrations up to 4 M. These cultures were
classified based on phylogenetic characteristics and comparative partial 16S
rRNA gene sequence analysis as belonging to the genera
Staphylococcus, Bacillus and
Brevibacterium. The results of this study describe the
ability of these halotolerant bacteria to produce some classes of hydrolases,
namely, lipases, proteases, amylases and cellulases, and biopolymers. The strain
characterized as of Brevibacterium avium presented cellulase
and amylase activities up to 4 M NaCl and also produced EPSs and PHAs. These
results indicate the biotechnological potential of certain microorganisms
recovered from the composting process, including halotolerant species, which
have the ability to produce enzymes and biopolymers, offering new perspectives
for environmental and industrial applications.
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Affiliation(s)
- Lilian C G Oliveira
- Universidade Federal de São Paulo, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brasil, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brazil
| | - Patricia Locosque Ramos
- Universidade Federal de São Paulo, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brasil, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brazil. ; Laboratório de Microbiologia Aplicada, Fundação Parque Zoológico de São Paulo, São Paulo, SP, Brasil, Laboratório de Microbiologia Aplicada, Fundação Parque Zoológico de São Paulo, São Paulo, SP, Brazil
| | - Alyne Marem
- Universidade Federal de São Paulo, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brasil, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brazil
| | - Marcia Y Kondo
- Universidade Federal de São Paulo, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brasil, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brazil
| | - Rafael C S Rocha
- Universidade Federal de São Paulo, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brasil, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brazil. ; Koppert Biological Systems, Itapetininga, SP, Brasil, Koppert Biological Systems, Itapetininga, SP, Brazil
| | - Thiago Bertolini
- Universidade Federal de São Paulo, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brasil, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brazil
| | - Marghuel A V Silveira
- Universidade Federal de São Paulo, Departamento de Ciências Biológicas, Universidade Federal de São Paulo, Diadema, SP, Brasil, Departamento de Ciências Biológicas, Universidade Federal de São Paulo, Diadema, SP, Brazil
| | - João Batista da Cruz
- Laboratório de Microbiologia Aplicada, Fundação Parque Zoológico de São Paulo, São Paulo, SP, Brasil, Laboratório de Microbiologia Aplicada, Fundação Parque Zoológico de São Paulo, São Paulo, SP, Brazil
| | - Suzan Pantaroto de Vasconcellos
- Universidade Federal de São Paulo, Departamento de Ciências Biológicas, Universidade Federal de São Paulo, Diadema, SP, Brasil, Departamento de Ciências Biológicas, Universidade Federal de São Paulo, Diadema, SP, Brazil. ; Laboratório de Microbiologia Aplicada, Fundação Parque Zoológico de São Paulo, São Paulo, SP, Brasil, Laboratório de Microbiologia Aplicada, Fundação Parque Zoológico de São Paulo, São Paulo, SP, Brazil
| | - Luiz Juliano
- Universidade Federal de São Paulo, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brasil, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brazil. ; Laboratório de Microbiologia Aplicada, Fundação Parque Zoológico de São Paulo, São Paulo, SP, Brasil, Laboratório de Microbiologia Aplicada, Fundação Parque Zoológico de São Paulo, São Paulo, SP, Brazil
| | - Debora N Okamoto
- Universidade Federal de São Paulo, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brasil, Departamento de Biofísica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, SP, Brazil
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Tiquia SM, Schleibak M, Schlaff J, Floyd C, Benipal B, Zakhem E, Murray KS. Microbial community profiling and characterization of some heterotrophic bacterial isolates from river waters and shallow groundwater wells along the Rouge River, southeast Michigan. ENVIRONMENTAL TECHNOLOGY 2008; 29:651-663. [PMID: 18702291 DOI: 10.1080/09593330801986998] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
This study was conducted to elucidate microbiological characteristics of river water and groundwater communities in order to improve our conceptual and predictive understanding of river and groundwater ecosystem processes, functioning and management. Rouge River bacterial communities from shallow groundwater and river water were screened using Biolog Ecoplates, which test for oxidation of selected carbon sources and by culturing heterotrophic bacteria. The isolates cultured from the samples were also characterized using the 16SrRNA gene-based approach. The patterns of utilization of the groups of carbon substrates by the microbial communities revealed differences between river water and groundwater samples. Carbohydrates, polymers, carboxylic acids and amino acids were highly utilized by the microbial communities in the river samples, while carbohydrates, polymers, amino acids and phenolic compounds were metabolized in the groundwater samples. Sequence comparison results showed that the most prevalent phylum in all sites was the Firmicutes (low G+C, mostly gram-positive bacteria). The dominant isolates from this phylum were similar to Bacillus spp., (98% nucleotide identity), which represented approximately 62% of the total number of unique isolates. Also prevalent were the gamma-Proteobacteria, which were dominated by 16S rRNA sequences 98-99% similar to that of Pseudomonas spp. The observed profile of carbon sources metabolized reflected the catabolic potential of the river water and groundwater community. Many of the isolates recovered have been known to metabolize several organic substrates, and may have potential use in remediation organic contaminants from the Rouge River. Direct incubation water samples in Biolog Ecoplates produced patterns of metabolic response useful in the classification and characterization of river water and groundwater microbial communities. Heterotrophic bacteria isolated from the sites may play important roles in the fate of many organic and inorganic contaminants from the Rouge River, although future studies are needed to understand their response to these contaminants.
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Affiliation(s)
- S M Tiquia
- Department of Natural Sciences, The University of Michigan, Dearborn, MI 48128, USA
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Noma Y, Yamamoto T, Falandysz J, Lukaszewicz E, Gutfrańska A, Sakai S. By-side impurities in chloronaphthalene mixtures of the Halowax series: all 12 chlorobenzenes. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART A, TOXIC/HAZARDOUS SUBSTANCES & ENVIRONMENTAL ENGINEERING 2004; 39:2011-2022. [PMID: 15332665 DOI: 10.1081/ese-120039371] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Total chlorobenzene content of the Halowax mixtures ranged from 1100 to 9800 ng/g. A lower chlorinated Halowax 1031 and 1000 were a several times more contaminated with chlorobenzenes than higher chlorinated Halowax 1001, 1099, 1013, 1014, or 1051. Depending on the type of the Halowax mixture the most contributing amongst of chlorobenzene homologue groups were di-, tetra-, penta-, and hexa-CBz. A dominance and specific profile of 1,4-DiCBz, PeCBz, and HCBz were characteristic to Halowax 1001, 1099, 1013, 1014, and 1051, while for other formulation the CBzs profile varied, and 1,2,3,4-TeCBz (Halowax 1031) and 1,4-DiCBz (Halowax 1000) predominated. A steric hindrance effect seems to direct a preferential by-side formation of 1,4-DiCBz and further also of PeCBz and HCBz due to relatively elevated temperature as well as duration time of synthesis for five most chlorinated (49-70 Cl%) chloronaphthalene Halowax formulations.
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Affiliation(s)
- Y Noma
- National Institute for Environmental Studies, Tsukuba, Japan.
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