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Ibarra Y, Marenco PJ, Centlivre JP, Hedlund BP, Rademacher LK, Greene SE, Bottjer DJ, Corsetti FA. A Biofilm Channel Origin for Vermiform Microstructure in Carbonate Microbialites. GEOBIOLOGY 2024; 22:e12623. [PMID: 39420484 DOI: 10.1111/gbi.12623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Revised: 08/29/2024] [Accepted: 09/30/2024] [Indexed: 10/19/2024]
Abstract
A three-dimensional tubular fabric known as "vermiform microstructure" in Phanerozoic and Neoproterozoic carbonate microbialites has been hypothesized to represent the body fossil of nonspicular keratose demosponges. If correct, this interpretation extends the sponge body fossil record and origin of animals to ~890 Ma. However, the veracity of the keratose sponge interpretation for vermiform microstructure remains in question, and the origin of the tubular fabric is enigmatic. Here we compare exceptionally well-preserved microbialite textures from the Upper Triassic to channel networks created by modern microbial biofilms. We demonstrate that anastomosing channel networks of similar size and geometries are produced by microbial biofilms in the absence of sponges, suggesting the origin for vermiform microstructure in ancient carbonates is not unique to sponges and perhaps best interpreted conservatively as likely microbial in origin. We present a taphonomic model of early biofilm lithification in seawater with anomalously high carbonate saturation necessary to preserve delicate microbial textures. This work has implications for the understanding of three-dimensional biofilm architecture that goes beyond the current micro-scale observations available from living biofilm experiments and suggests that biofilm channel networks have an extensive fossil record.
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Affiliation(s)
- Yadira Ibarra
- School of the Environment, San Francisco State University, San Francisco, California, USA
| | - Pedro J Marenco
- Department of Geology, Bryn Mawr College, Bryn Mawr, Pennsylvania, USA
| | - Jakob P Centlivre
- School of Life Sciences, University of Nevada, Las Vegas, Nevada, USA
| | - Brian P Hedlund
- School of Life Sciences, University of Nevada, Las Vegas, Nevada, USA
| | - Laura K Rademacher
- Geological and Environmental Sciences, University of the Pacific, Stockton, California, USA
| | - Sarah E Greene
- School of Geography, Earth and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, UK
| | - David J Bottjer
- Department of Earth Science, University of Southern California, Los Angeles, California, USA
| | - Frank A Corsetti
- Department of Earth Science, University of Southern California, Los Angeles, California, USA
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2
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Beeler SR, Gomez FJ, Bradley AS. Geospatial insights into the controls of microbialite formation at Laguna Negra, Argentina. GEOBIOLOGY 2023; 21:229-243. [PMID: 36183342 DOI: 10.1111/gbi.12529] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2022] [Revised: 08/23/2022] [Accepted: 09/19/2022] [Indexed: 06/16/2023]
Abstract
Microbialites provide a record of the interaction of microorganisms with their environment constituting a record of microbial life and environments through geologic time. Our capacity to interpret this record is limited by an incomplete understanding of the microbial, geochemical, and physical processes that influence microbialite formation and morphogenesis. The modern system Laguna Negra in Catamarca Province, Argentina contains microbialites in a zone of carbonate precipitation associated with physico-chemical gradients and variable microbial community structure, making it an ideal location to study how these processes interact to drive microbialite formation. In this study, we investigated the geospatial relationships between carbonate morphology, geochemistry, and microbial community at the macro- (decimeter) to mega- (meter) scale by combining high-resolution imagery with field observations. We mapped the distribution of carbonate morphologies and allochtonously-derived volcaniclasts and correlated these with sedimentary matrices and geochemical parameters. Our work shows that the macroscale distribution of different carbonate morphologies spatially correlates with microbial mat distributions-a result consistent with previous microscale observations. Specifically, microbialitic carbonate morphologies more commonly occur associated with microbial mats while abiotically derived carbonate morphologies were less commonly associated with microbial mats. Spatial variability in the size and abundance of mineralized structures was also observed, however, the processes controlling this variability remains unclear and likely represent a combination of microbial, geochemical, and physical processes. Likewise, the processes controlling the spatial distribution of microbial mats at Laguna Negra are also unresolved. Our results suggest that in addition to the physical drivers observed in other modern environments, variability in the spatial distribution of microbialites and other carbonate morphologies at the macro- to megascale can be controlled by microbial processes. Overall, this study provides insight into the interpretation of microbialite occurrence and distributions in the geologic record and highlights the utility of geospatial statistics to probe the controls of microbialite formation in other environments.
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Affiliation(s)
- Scott R Beeler
- Department of Earth and Planetary Sciences, Washington University in St. Louis, Saint Louis, Missouri, USA
- Engineering and Mining Experiment Station, South Dakota School of Mines and Technology, Rapid City, South Dakota, USA
| | - Fernando J Gomez
- Facultad de Ciencias Exactas, CICTERRA-CONICET, Fisicas, y Naturales, Universidad Nacional de Córdoba, Córdoba, Argentina
| | - Alexander S Bradley
- Department of Earth and Planetary Sciences, Washington University in St. Louis, Saint Louis, Missouri, USA
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Corenblit D, Decaux O, Delmotte S, Toumazet JP, Arrignon F, André MF, Darrozes J, Davies NS, Julien F, Otto T, Ramillien G, Roussel E, Steiger J, Viles H. Signatures of Life Detected in Images of Rocks Using Neural Network Analysis Demonstrate New Potential for Searching for Biosignatures on the Surface of Mars. ASTROBIOLOGY 2023; 23:308-326. [PMID: 36668995 DOI: 10.1089/ast.2022.0034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
Microorganisms play a role in the construction or modulation of various types of landforms. They are especially notable for forming microbially induced sedimentary structures (MISS). Such microbial structures have been considered to be among the most likely biosignatures that might be encountered on the martian surface. Twenty-nine algorithms have been tested with images taken during a laboratory experiment for testing their performance in discriminating mat cracks (MISS) from abiotic mud cracks. Among the algorithms, neural network types produced excellent predictions with similar precision of 0.99. Following that step, a convolutional neural network (CNN) approach has been tested to see whether it can conclusively detect MISS in images of rocks and sediment surfaces taken at different natural sites where present and ancient (fossil) microbial mat cracks and abiotic desiccation cracks were observed. The CNN approach showed excellent prediction of biotic and abiotic structures from the images (global precision, sensitivity, and specificity, respectively, 0.99, 0.99, and 0.97). The key areas of interest of the machine matched well with human expertise for distinguishing biotic and abiotic forms (in their geomorphological meaning). The images indicated clear differences between the abiotic and biotic situations expressed at three embedded scales: texture (size, shape, and arrangement of the grains constituting the surface of one form), form (outer shape of one form), and pattern of form arrangement (arrangement of the forms over a few square meters). The most discriminative components for biogenicity were the border of the mat cracks with their tortuous enlarged and blistered morphology more or less curved upward, sometimes with thin laminations. To apply this innovative biogeomorphological approach to the images obtained by rovers on Mars, the main physical and biological sources of variation in abiotic and biotic outcomes must now be further considered.
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Affiliation(s)
- Dov Corenblit
- Université Clermont Auvergne, CNRS, GEOLAB, Clermont-Ferrand, France
- CNRS, Laboratoire écologie fonctionnelle et environnement, Université Paul Sabatier, CNRS, INPT, UPS, Toulouse, France
| | | | | | | | | | | | - José Darrozes
- Université Paul Sabatier, CNRS/IRD, GET, Toulouse, France
| | - Neil S Davies
- Department of Earth Sciences, University of Cambridge, Cambridge, United Kingdom
| | - Frédéric Julien
- CNRS, Laboratoire écologie fonctionnelle et environnement, Université Paul Sabatier, CNRS, INPT, UPS, Toulouse, France
| | - Thierry Otto
- CNRS, Laboratoire écologie fonctionnelle et environnement, Université Paul Sabatier, CNRS, INPT, UPS, Toulouse, France
| | | | - Erwan Roussel
- Université Clermont Auvergne, CNRS, GEOLAB, Clermont-Ferrand, France
| | - Johannes Steiger
- Université Clermont Auvergne, CNRS, GEOLAB, Clermont-Ferrand, France
| | - Heather Viles
- School of Geography and the Environment, University of Oxford, Oxford, United Kingdom
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Chacon-Baca E, Santos A, Sarmiento AM, Luís AT, Santisteban M, Fortes JC, Dávila JM, Diaz-Curiel JM, Grande JA. Acid Mine Drainage as Energizing Microbial Niches for the Formation of Iron Stromatolites: The Tintillo River in Southwest Spain. ASTROBIOLOGY 2021; 21:443-463. [PMID: 33351707 DOI: 10.1089/ast.2019.2164] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The Iberian Pyrite Belt in southwest Spain hosts some of the largest and diverse extreme acidic environments with textural variation across rapidly changing biogeochemical gradients at multiple scales. After almost three decades of studies, mostly focused on molecular evolution and metagenomics, there is an increasing awareness of the multidisciplinary potential of these types of settings, especially for astrobiology. Since modern automatized exploration on extraterrestrial surfaces is essentially based on the morphological recognition of biosignatures, a macroscopic characterization of such sedimentary extreme environments and how they look is crucial to identify life properties, but it is a perspective that most molecular approaches frequently miss. Although acid mine drainage (AMD) systems are toxic and contaminated, they offer at the same time the bioengineering tools for natural remediation strategies. This work presents a biosedimentological characterization of the clastic iron stromatolites in the Tintillo river. They occur as laminated terraced iron formations that are the most distinctive sedimentary facies at the Tintillo river, which is polluted by AMD. Iron stromatolites originate from fluvial abiotic factors that interact with biological zonation. The authigenic precipitation of schwertmannite and jarosite results from microbial-mineral interactions between mineral and organic matrices. The Tintillo iron stromatolites are composed of bacterial filaments and diatoms as Nitzschia aurariae, Pinnularia aljustrelica, Stauroneis kriegeri, and Fragilaria sp. Furthermore, the active biosorption and bioleaching of sulfur are suggested by the black and white coloration of microbial filaments inside stromatolites. AMD systems are hazardous due to physical, chemical, and biological agents, but they also provide biogeochemical sources with which to infer past geochemical conditions on Earth and inform exploration efforts on extraterrestrial surfaces in the future.
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Affiliation(s)
- Elizabeth Chacon-Baca
- Departamento de Geología, Facultad de Ciencias de la Tierra, Universidad Autónoma de Nuevo Léon (UANL), Linares, México
| | - Ana Santos
- Department of Applied Geosciences, CCTH-Science and Technology Research Centre, University of Huelva, Huelva, Spain
- Applied Geosciences Research Group (RNM276), Departamento de Ciencias de la Tierra, Facultad de Ciencias Experimentales, Universidad de Huelva, Huelva, Spain
| | - Aguasanta Miguel Sarmiento
- Department of Water, Mining and Environment, Scientific and Technological Center of Huelva, University of Huelva, Huelva, Spain
- Sustainable Mining Engineering Research Group, Department of Mining, Mechanic, Energetic and Construction Engineering, Higher Technical School of Engineering, University of Huelva, Huelva, Spain
| | - Ana Teresa Luís
- Department of Water, Mining and Environment, Scientific and Technological Center of Huelva, University of Huelva, Huelva, Spain
- GeoBioTec Research Unit, Department of Geosciences, University of Aveiro, Aveiro, Portugal
| | - Maria Santisteban
- Department of Water, Mining and Environment, Scientific and Technological Center of Huelva, University of Huelva, Huelva, Spain
- Sustainable Mining Engineering Research Group, Department of Mining, Mechanic, Energetic and Construction Engineering, Higher Technical School of Engineering, University of Huelva, Huelva, Spain
| | - Juan Carlos Fortes
- Department of Water, Mining and Environment, Scientific and Technological Center of Huelva, University of Huelva, Huelva, Spain
- Sustainable Mining Engineering Research Group, Department of Mining, Mechanic, Energetic and Construction Engineering, Higher Technical School of Engineering, University of Huelva, Huelva, Spain
| | - José Miguel Dávila
- Department of Water, Mining and Environment, Scientific and Technological Center of Huelva, University of Huelva, Huelva, Spain
- Sustainable Mining Engineering Research Group, Department of Mining, Mechanic, Energetic and Construction Engineering, Higher Technical School of Engineering, University of Huelva, Huelva, Spain
| | - Jesus M Diaz-Curiel
- Departamento de Geología, Escuela Técnica Superior de Ingenieros de Minas, Madrid, Spain
| | - Jose Antonio Grande
- Department of Water, Mining and Environment, Scientific and Technological Center of Huelva, University of Huelva, Huelva, Spain
- Sustainable Mining Engineering Research Group, Department of Mining, Mechanic, Energetic and Construction Engineering, Higher Technical School of Engineering, University of Huelva, Huelva, Spain
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Corenblit D, Darrozes J, Julien F, Otto T, Roussel E, Steiger J, Viles H. The Search for a Signature of Life on Mars: A Biogeomorphological Approach. ASTROBIOLOGY 2019; 19:1279-1291. [PMID: 31584307 DOI: 10.1089/ast.2018.1969] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Geological evidence shows that life on Earth evolved in line with major concomitant changes in Earth surface processes and landforms. Biogeomorphological characteristics, especially those involving microorganisms, are potentially important facets of biosignatures on Mars and are generating increasing interest in astrobiology. Using Earth as an analog provides reasons to suspect that past or present life on Mars could have resulted in recognizable biogenic landforms. Here, we discuss the potential for, and limitations of, a biogeomorphological approach to identifying the subsets of landforms that are modulated or created through biological processes and thus present signatures of life on Mars. Subsets especially involving microorganisms that are potentially important facets of biosignatures on Mars are proposed: (i) weathering features, biocrusts, patinas, and varnishes; (ii) microbialites and microbially induced sedimentary structures (MISS); (iii) bioaccumulations of skeletal remains; (iv) degassing landforms; (v) cryoconites; (vi) self-organized patterns; (vii) unclassified non-analog landforms. We propose a biogeomorphological frequency histogram approach to identify anomalies/modulations in landform properties. Such detection of anomalies/modulations will help track a biotic origin and lead to the development of an integrative multiproxy and multiscale approach combining morphological, structural, textural, and geochemical expertise. This perspective can help guide the choice of investigation sites for future missions and the types and scales of observations to be made by orbiters and rovers.
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Affiliation(s)
- Dov Corenblit
- Université Clermont Auvergne, CNRS, GEOLAB - F-63000 Clermont-Ferrand, France
| | - José Darrozes
- Université Paul Sabatier, CNRS/IRD, GET - F-31062 Toulouse, France
| | - Frédéric Julien
- CNRS, ECOLAB, Université Paul Sabatier, CNRS, INPT, UPS, F-31062 Toulouse, France
| | - Thierry Otto
- CNRS, ECOLAB, Université Paul Sabatier, CNRS, INPT, UPS, F-31062 Toulouse, France
| | - Erwan Roussel
- Université Clermont Auvergne, CNRS, GEOLAB - F-63000 Clermont-Ferrand, France
| | - Johannes Steiger
- Université Clermont Auvergne, CNRS, GEOLAB - F-63000 Clermont-Ferrand, France
| | - Heather Viles
- School of Geography and the Environment, University of Oxford, Oxford, United Kingdom
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Living Dendrolitic Microbial Mats in Hamelin Pool, Shark Bay, Western Australia. GEOSCIENCES 2018. [DOI: 10.3390/geosciences8060212] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Abstract
The scientific objectives of the ExoMars rover are designed to answer several key questions in the search for life on Mars. In particular, the unique subsurface drill will address some of these, such as the possible existence and stability of subsurface organics. PanCam will establish the surface geological and morphological context for the mission, working in collaboration with other context instruments. Here, we describe the PanCam scientific objectives in geology, atmospheric science, and 3-D vision. We discuss the design of PanCam, which includes a stereo pair of Wide Angle Cameras (WACs), each of which has an 11-position filter wheel and a High Resolution Camera (HRC) for high-resolution investigations of rock texture at a distance. The cameras and electronics are housed in an optical bench that provides the mechanical interface to the rover mast and a planetary protection barrier. The electronic interface is via the PanCam Interface Unit (PIU), and power conditioning is via a DC-DC converter. PanCam also includes a calibration target mounted on the rover deck for radiometric calibration, fiducial markers for geometric calibration, and a rover inspection mirror. Key Words: Mars—ExoMars—Instrumentation—Geology—Atmosphere—Exobiology—Context. Astrobiology 17, 511–541.
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