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For: Bascom RA, Chan H, Rachubinski RA. Peroxisome biogenesis occurs in an unsynchronized manner in close association with the endoplasmic reticulum in temperature-sensitive Yarrowia lipolytica Pex3p mutants. Mol Biol Cell 2003;14:939-57. [PMID: 12631715 PMCID: PMC151571 DOI: 10.1091/mbc.e02-10-0633] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2002] [Revised: 10/31/2002] [Accepted: 11/06/2002] [Indexed: 11/11/2022]  Open
Number Cited by Other Article(s)
1
Poopanitpan N, Piampratom S, Viriyathanit P, Lertvatasilp T, Horiuchi H, Fukuda R, Kiatwuthinon P. SNF1 plays a crucial role in the utilization of n-alkane and transcriptional regulation of the genes involved in it in the yeast Yarrowia lipolytica. Heliyon 2024;10:e32886. [PMID: 38975102 PMCID: PMC11226914 DOI: 10.1016/j.heliyon.2024.e32886] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Revised: 06/10/2024] [Accepted: 06/11/2024] [Indexed: 07/09/2024]  Open
2
Using oils and fats to replace sugars as feedstocks for biomanufacturing: Challenges and opportunities for the yeast Yarrowia lipolytica. Biotechnol Adv 2023;65:108128. [PMID: 36921878 DOI: 10.1016/j.biotechadv.2023.108128] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2023] [Revised: 03/08/2023] [Accepted: 03/10/2023] [Indexed: 03/16/2023]
3
Deb R, Nagotu S. The nexus between peroxisome abundance and chronological ageing in Saccharomyces cerevisiae. Biogerontology 2023;24:81-97. [PMID: 36209442 DOI: 10.1007/s10522-022-09992-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 09/23/2022] [Indexed: 01/20/2023]
4
Molotkovsky RJ, Kuzmin PI. Fusion of Peroxisome and Lipid Droplet Membranes: Expansion of a π-Shaped Structure. BIOCHEMISTRY (MOSCOW), SUPPLEMENT SERIES A: MEMBRANE AND CELL BIOLOGY 2022. [DOI: 10.1134/s1990747822050105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
5
Deori NM, Nagotu S. Peroxisome biogenesis and inter-organelle communication: an indispensable role for Pex11 and Pex30 family proteins in yeast. Curr Genet 2022;68:537-550. [PMID: 36242632 DOI: 10.1007/s00294-022-01254-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 08/29/2022] [Accepted: 08/31/2022] [Indexed: 11/26/2022]
6
Leyland B, Boussiba S, Khozin-Goldberg I. A Review of Diatom Lipid Droplets. BIOLOGY 2020;9:biology9020038. [PMID: 32098118 PMCID: PMC7168155 DOI: 10.3390/biology9020038] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Revised: 02/12/2020] [Accepted: 02/14/2020] [Indexed: 12/20/2022]
7
Burkhart SE, Llinas RJ, Bartel B. PEX16 contributions to peroxisome import and metabolism revealed by viable Arabidopsis pex16 mutants. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2019;61:853-870. [PMID: 30761735 PMCID: PMC6613983 DOI: 10.1111/jipb.12789] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2018] [Accepted: 02/10/2019] [Indexed: 06/09/2023]
8
Jansen RLM, Klei IJ. The peroxisome biogenesis factors Pex3 and Pex19: multitasking proteins with disputed functions. FEBS Lett 2019;593:457-474. [DOI: 10.1002/1873-3468.13340] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Revised: 02/06/2019] [Accepted: 02/12/2019] [Indexed: 11/11/2022]
9
Discovery of plant extracts that greatly delay yeast chronological aging and have different effects on longevity-defining cellular processes. Oncotarget 2017;7:16542-66. [PMID: 26918729 PMCID: PMC4941334 DOI: 10.18632/oncotarget.7665] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2016] [Accepted: 02/11/2016] [Indexed: 01/19/2023]  Open
10
Hua R, Kim PK. Multiple paths to peroxisomes: Mechanism of peroxisome maintenance in mammals. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2016;1863:881-91. [DOI: 10.1016/j.bbamcr.2015.09.026] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2015] [Revised: 09/18/2015] [Accepted: 09/21/2015] [Indexed: 12/19/2022]
11
Motley AM, Galvin PC, Ekal L, Nuttall JM, Hettema EH. Reevaluation of the role of Pex1 and dynamin-related proteins in peroxisome membrane biogenesis. J Cell Biol 2016;211:1041-56. [PMID: 26644516 PMCID: PMC4674274 DOI: 10.1083/jcb.201412066] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]  Open
12
Mei J, Leung NLC, Kwok RTK, Lam JWY, Tang BZ. Aggregation-Induced Emission: Together We Shine, United We Soar! Chem Rev 2015;115:11718-940. [DOI: 10.1021/acs.chemrev.5b00263] [Citation(s) in RCA: 4534] [Impact Index Per Article: 453.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
13
Targeting and insertion of peroxisomal membrane proteins: ER trafficking versus direct delivery to peroxisomes. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2015;1863:870-80. [PMID: 26392202 DOI: 10.1016/j.bbamcr.2015.09.021] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2015] [Revised: 09/11/2015] [Accepted: 09/16/2015] [Indexed: 12/11/2022]
14
No peroxisome is an island - Peroxisome contact sites. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2015;1863:1061-9. [PMID: 26384874 DOI: 10.1016/j.bbamcr.2015.09.016] [Citation(s) in RCA: 110] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2015] [Revised: 09/10/2015] [Accepted: 09/11/2015] [Indexed: 10/23/2022]
15
Chang J, Klute MJ, Tower RJ, Mast FD, Dacks JB, Rachubinski RA. An ancestral role in peroxisome assembly is retained by the divisional peroxin Pex11 in the yeast Yarrowia lipolytica. J Cell Sci 2015;128:1327-40. [PMID: 25663700 DOI: 10.1242/jcs.157743] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
16
Williams C. Going against the flow: A case for peroxisomal protein export. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2014;1843:1386-92. [DOI: 10.1016/j.bbamcr.2014.04.009] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2014] [Revised: 04/03/2014] [Accepted: 04/07/2014] [Indexed: 10/25/2022]
17
Wang E, Zhao E, Hong Y, Lam JWY, Tang BZ. A highly selective AIE fluorogen for lipid droplet imaging in live cells and green algae. J Mater Chem B 2014;2:2013-2019. [DOI: 10.1039/c3tb21675f] [Citation(s) in RCA: 93] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
18
Sheibani S, Richard VR, Beach A, Leonov A, Feldman R, Mattie S, Khelghatybana L, Piano A, Greenwood M, Vali H, Titorenko VI. Macromitophagy, neutral lipids synthesis, and peroxisomal fatty acid oxidation protect yeast from "liponecrosis", a previously unknown form of programmed cell death. Cell Cycle 2013;13:138-47. [PMID: 24196447 DOI: 10.4161/cc.26885] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
19
Thoms S, Debelyy MO, Connerth M, Daum G, Erdmann R. The putative Saccharomyces cerevisiae hydrolase Ldh1p is localized to lipid droplets. EUKARYOTIC CELL 2011;10:770-5. [PMID: 21478430 PMCID: PMC3127662 DOI: 10.1128/ec.05038-11] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 03/18/2011] [Accepted: 03/30/2011] [Indexed: 11/20/2022]
20
Chang J, Mast FD, Fagarasanu A, Rachubinski DA, Eitzen GA, Dacks JB, Rachubinski RA. Pex3 peroxisome biogenesis proteins function in peroxisome inheritance as class V myosin receptors. ACTA ACUST UNITED AC 2009;187:233-46. [PMID: 19822674 PMCID: PMC2768826 DOI: 10.1083/jcb.200902117] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
21
Goldberg AA, Bourque SD, Kyryakov P, Gregg C, Boukh-Viner T, Beach A, Burstein MT, Machkalyan G, Richard V, Rampersad S, Cyr D, Milijevic S, Titorenko VI. Effect of calorie restriction on the metabolic history of chronologically aging yeast. Exp Gerontol 2009;44:555-71. [PMID: 19539741 DOI: 10.1016/j.exger.2009.06.001] [Citation(s) in RCA: 103] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2009] [Revised: 05/30/2009] [Accepted: 06/05/2009] [Indexed: 11/30/2022]
22
Titorenko VI, Rachubinski RA. Spatiotemporal dynamics of the ER-derived peroxisomal endomembrane system. INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY 2009;272:191-244. [PMID: 19121819 DOI: 10.1016/s1937-6448(08)01605-5] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
23
Goodman JM. The gregarious lipid droplet. J Biol Chem 2008;283:28005-9. [PMID: 18611863 DOI: 10.1074/jbc.r800042200] [Citation(s) in RCA: 205] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
24
Kiel JAKW, Veenhuis M, van der Klei IJ. PEX genes in fungal genomes: common, rare or redundant. Traffic 2007;7:1291-303. [PMID: 16978390 DOI: 10.1111/j.1600-0854.2006.00479.x] [Citation(s) in RCA: 159] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
25
Fujiki Y, Matsuzono Y, Matsuzaki T, Fransen M. Import of peroxisomal membrane proteins: The interplay of Pex3p- and Pex19p-mediated interactions. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2006;1763:1639-46. [PMID: 17069900 DOI: 10.1016/j.bbamcr.2006.09.030] [Citation(s) in RCA: 99] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2006] [Revised: 09/07/2006] [Accepted: 09/20/2006] [Indexed: 02/01/2023]
26
Boukh-Viner T, Titorenko VI. Lipids and lipid domains in the peroxisomal membrane of the yeast Yarrowia lipolytica. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2006;1763:1688-96. [PMID: 17023063 DOI: 10.1016/j.bbamcr.2006.08.016] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2006] [Revised: 08/10/2006] [Accepted: 08/18/2006] [Indexed: 11/26/2022]
27
Browman DT, Resek ME, Zajchowski LD, Robbins SM. Erlin-1 and erlin-2 are novel members of the prohibitin family of proteins that define lipid-raft-like domains of the ER. J Cell Sci 2006;119:3149-60. [PMID: 16835267 DOI: 10.1242/jcs.03060] [Citation(s) in RCA: 185] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]  Open
28
Titorenko VI, Mullen RT. Peroxisome biogenesis: the peroxisomal endomembrane system and the role of the ER. ACTA ACUST UNITED AC 2006;174:11-7. [PMID: 16801391 PMCID: PMC2064154 DOI: 10.1083/jcb.200604036] [Citation(s) in RCA: 67] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
29
Binns D, Januszewski T, Chen Y, Hill J, Markin VS, Zhao Y, Gilpin C, Chapman KD, Anderson RGW, Goodman JM. An intimate collaboration between peroxisomes and lipid bodies. ACTA ACUST UNITED AC 2006;173:719-31. [PMID: 16735577 PMCID: PMC2063889 DOI: 10.1083/jcb.200511125] [Citation(s) in RCA: 294] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
30
Estrada de Martin P, Novick P, Ferro-Novick S. The organization, structure, and inheritance of the ER in higher and lower eukaryotes. Biochem Cell Biol 2006;83:752-61. [PMID: 16333327 DOI: 10.1139/o05-159] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
31
Haan GJ, Baerends RJS, Krikken AM, Otzen M, Veenhuis M, van der Klei IJ. Reassembly of peroxisomes in Hansenula polymorpha pex3 cells on reintroduction of Pex3p involves the nuclear envelope. FEMS Yeast Res 2006;6:186-94. [PMID: 16487342 DOI: 10.1111/j.1567-1364.2006.00037.x] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]  Open
32
Kragt A, Voorn-Brouwer T, van den Berg M, Distel B. Endoplasmic Reticulum-directed Pex3p Routes to Peroxisomes and Restores Peroxisome Formation in a Saccharomyces cerevisiae pex3Δ Strain. J Biol Chem 2005;280:34350-7. [PMID: 16100114 DOI: 10.1074/jbc.m505432200] [Citation(s) in RCA: 99] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
33
Hoepfner D, Schildknegt D, Braakman I, Philippsen P, Tabak HF. Contribution of the endoplasmic reticulum to peroxisome formation. Cell 2005;122:85-95. [PMID: 16009135 DOI: 10.1016/j.cell.2005.04.025] [Citation(s) in RCA: 362] [Impact Index Per Article: 18.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2004] [Revised: 03/15/2005] [Accepted: 04/25/2005] [Indexed: 01/07/2023]
34
Tam YYC, Fagarasanu A, Fagarasanu M, Rachubinski RA. Pex3p initiates the formation of a preperoxisomal compartment from a subdomain of the endoplasmic reticulum in Saccharomyces cerevisiae. J Biol Chem 2005;280:34933-9. [PMID: 16087670 DOI: 10.1074/jbc.m506208200] [Citation(s) in RCA: 132] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]  Open
35
Marelli M, Smith JJ, Jung S, Yi E, Nesvizhskii AI, Christmas RH, Saleem RA, Tam YYC, Fagarasanu A, Goodlett DR, Aebersold R, Rachubinski RA, Aitchison JD. Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane. J Cell Biol 2004;167:1099-112. [PMID: 15596542 PMCID: PMC2172632 DOI: 10.1083/jcb.200404119] [Citation(s) in RCA: 127] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2004] [Accepted: 11/10/2004] [Indexed: 11/22/2022]  Open
36
Schliebs W, Kunau WH. Peroxisome Membrane Biogenesis: The Stage Is Set. Curr Biol 2004;14:R397-9. [PMID: 15186768 DOI: 10.1016/j.cub.2004.05.017] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
37
Otzen M, Perband U, Wang D, Baerends RJS, Kunau WH, Veenhuis M, Van der Klei IJ. Hansenula polymorpha Pex19p Is Essential for the Formation of Functional Peroxisomal Membranes. J Biol Chem 2004;279:19181-90. [PMID: 14981078 DOI: 10.1074/jbc.m314275200] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
38
Hunt JE, Trelease RN. Sorting pathway and molecular targeting signals for the Arabidopsis peroxin 3. Biochem Biophys Res Commun 2004;314:586-96. [PMID: 14733948 DOI: 10.1016/j.bbrc.2003.12.123] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
39
Tabak HF, Murk JL, Braakman I, Geuze HJ. Peroxisomes start their life in the endoplasmic reticulum. Traffic 2003;4:512-8. [PMID: 12839494 DOI: 10.1034/j.1600-0854.2003.00110.x] [Citation(s) in RCA: 86] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
40
John Wiley & Sons, Ltd.. Current awareness on yeast. Yeast 2003. [DOI: 10.1002/yea.947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]  Open
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