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Number Cited by Other Article(s)
1
Barba-Montoya J, Tao Q, Kumar S. Molecular and morphological clocks for estimating evolutionary divergence times. BMC Ecol Evol 2021;21:83. [PMID: 33980146 PMCID: PMC8117668 DOI: 10.1186/s12862-021-01798-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Accepted: 04/20/2021] [Indexed: 11/23/2022]  Open
2
Nie Y, Foster CSP, Zhu T, Yao R, Duchêne DA, Ho SYW, Zhong B. Accounting for Uncertainty in the Evolutionary Timescale of Green Plants Through Clock-Partitioning and Fossil Calibration Strategies. Syst Biol 2020;69:1-16. [PMID: 31058981 DOI: 10.1093/sysbio/syz032] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2018] [Revised: 04/30/2019] [Accepted: 05/02/2019] [Indexed: 11/13/2022]  Open
3
The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa. Nat Commun 2018;9:5094. [PMID: 30504848 PMCID: PMC6269545 DOI: 10.1038/s41467-018-07370-z] [Citation(s) in RCA: 76] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2018] [Accepted: 10/18/2018] [Indexed: 11/18/2022]  Open
4
Duchene S, Duchene DA, Geoghegan JL, Dyson ZA, Hawkey J, Holt KE. Inferring demographic parameters in bacterial genomic data using Bayesian and hybrid phylogenetic methods. BMC Evol Biol 2018;18:95. [PMID: 29914372 PMCID: PMC6006949 DOI: 10.1186/s12862-018-1210-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 06/05/2018] [Indexed: 12/04/2022]  Open
5
Foster CSP, Ho SYW. Strategies for Partitioning Clock Models in Phylogenomic Dating: Application to the Angiosperm Evolutionary Timescale. Genome Biol Evol 2018;9:2752-2763. [PMID: 29036288 PMCID: PMC5647803 DOI: 10.1093/gbe/evx198] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/25/2017] [Indexed: 12/14/2022]  Open
6
Bromham L, Duchêne S, Hua X, Ritchie AM, Duchêne DA, Ho SYW. Bayesian molecular dating: opening up the black box. Biol Rev Camb Philos Soc 2017;93:1165-1191. [DOI: 10.1111/brv.12390] [Citation(s) in RCA: 104] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2017] [Revised: 11/13/2017] [Accepted: 11/17/2017] [Indexed: 12/27/2022]
7
Tong KJ, Duchêne S, Lo N, Ho SYW. The impacts of drift and selection on genomic evolution in insects. PeerJ 2017;5:e3241. [PMID: 28462044 PMCID: PMC5410144 DOI: 10.7717/peerj.3241] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2016] [Accepted: 03/28/2017] [Indexed: 11/20/2022]  Open
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