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For: Vidaver RM, Fortner DM, Loos-Austin LS, Brow DA. Multiple functions of Saccharomyces cerevisiae splicing protein Prp24 in U6 RNA structural rearrangements. Genetics 1999;153:1205-18. [PMID: 10545453 PMCID: PMC1460831 DOI: 10.1093/genetics/153.3.1205] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
Number Cited by Other Article(s)
1
Architecture of the U6 snRNP reveals specific recognition of 3'-end processed U6 snRNA. Nat Commun 2018;9:1749. [PMID: 29717126 PMCID: PMC5931518 DOI: 10.1038/s41467-018-04145-4] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2018] [Accepted: 04/06/2018] [Indexed: 01/09/2023]  Open
2
Didychuk AL, Butcher SE, Brow DA. The life of U6 small nuclear RNA, from cradle to grave. RNA (NEW YORK, N.Y.) 2018;24:437-460. [PMID: 29367453 PMCID: PMC5855946 DOI: 10.1261/rna.065136.117] [Citation(s) in RCA: 88] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
3
Oliveira C, Faoro H, Alves LR, Goldenberg S. RNA-binding proteins and their role in the regulation of gene expression in Trypanosoma cruzi and Saccharomyces cerevisiae. Genet Mol Biol 2017;40:22-30. [PMID: 28463381 PMCID: PMC5409782 DOI: 10.1590/1678-4685-gmb-2016-0258] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Accepted: 01/10/2017] [Indexed: 02/07/2023]  Open
4
Montemayor EJ, Didychuk AL, Liao H, Hu P, Brow DA, Butcher SE. Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core. Acta Crystallogr D Struct Biol 2017;73:1-8. [PMID: 28045380 PMCID: PMC5331471 DOI: 10.1107/s2059798316018222] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Accepted: 11/14/2016] [Indexed: 11/10/2022]  Open
5
Rodgers ML, Didychuk AL, Butcher SE, Brow DA, Hoskins AA. A multi-step model for facilitated unwinding of the yeast U4/U6 RNA duplex. Nucleic Acids Res 2016;44:10912-10928. [PMID: 27484481 PMCID: PMC5159527 DOI: 10.1093/nar/gkw686] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2016] [Revised: 07/17/2016] [Accepted: 07/22/2016] [Indexed: 11/15/2022]  Open
6
Burke JE, Butcher SE, Brow DA. Spliceosome assembly in the absence of stable U4/U6 RNA pairing. RNA (NEW YORK, N.Y.) 2015;21:923-34. [PMID: 25762536 PMCID: PMC4408799 DOI: 10.1261/rna.048421.114] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2014] [Accepted: 01/10/2015] [Indexed: 05/08/2023]
7
Rüegger S, Miki TS, Hess D, Großhans H. The ribonucleotidyl transferase USIP-1 acts with SART3 to promote U6 snRNA recycling. Nucleic Acids Res 2015;43:3344-57. [PMID: 25753661 PMCID: PMC4381082 DOI: 10.1093/nar/gkv196] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2014] [Accepted: 02/24/2015] [Indexed: 02/02/2023]  Open
8
Basak A, Query CC. A pseudouridine residue in the spliceosome core is part of the filamentous growth program in yeast. Cell Rep 2014;8:966-73. [PMID: 25127136 DOI: 10.1016/j.celrep.2014.07.004] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2014] [Revised: 05/30/2014] [Accepted: 07/02/2014] [Indexed: 11/20/2022]  Open
9
Montemayor EJ, Curran EC, Liao HH, Andrews KL, Treba CN, Butcher SE, Brow DA. Core structure of the U6 small nuclear ribonucleoprotein at 1.7-Å resolution. Nat Struct Mol Biol 2014;21:544-51. [PMID: 24837192 PMCID: PMC4141773 DOI: 10.1038/nsmb.2832] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2014] [Accepted: 04/28/2014] [Indexed: 12/11/2022]
10
Martin-Tumasz S, Richie AC, Clos LJ, Brow DA, Butcher SE. A novel occluded RNA recognition motif in Prp24 unwinds the U6 RNA internal stem loop. Nucleic Acids Res 2011;39:7837-47. [PMID: 21653550 PMCID: PMC3177201 DOI: 10.1093/nar/gkr455] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]  Open
11
Secondary structure of U6 small nuclear RNA: implications for spliceosome assembly. Biochem Soc Trans 2010;38:1099-104. [PMID: 20659011 DOI: 10.1042/bst0381099] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
12
Martin-Tumasz S, Reiter NJ, Brow DA, Butcher SE. Structure and functional implications of a complex containing a segment of U6 RNA bound by a domain of Prp24. RNA (NEW YORK, N.Y.) 2010;16:792-804. [PMID: 20181740 PMCID: PMC2844626 DOI: 10.1261/rna.1913310] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
13
Mefford MA, Staley JP. Evidence that U2/U6 helix I promotes both catalytic steps of pre-mRNA splicing and rearranges in between these steps. RNA (NEW YORK, N.Y.) 2009;15:1386-97. [PMID: 19458033 PMCID: PMC2704075 DOI: 10.1261/rna.1582609] [Citation(s) in RCA: 64] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2009] [Accepted: 03/24/2009] [Indexed: 05/20/2023]
14
Karaduman R, Dube P, Stark H, Fabrizio P, Kastner B, Lührmann R. Structure of yeast U6 snRNPs: arrangement of Prp24p and the LSm complex as revealed by electron microscopy. RNA (NEW YORK, N.Y.) 2008;14:2528-37. [PMID: 18971323 PMCID: PMC2590955 DOI: 10.1261/rna.1369808] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
15
McManus CJ, Schwartz ML, Butcher SE, Brow DA. A dynamic bulge in the U6 RNA internal stem-loop functions in spliceosome assembly and activation. RNA (NEW YORK, N.Y.) 2007;13:2252-65. [PMID: 17925343 PMCID: PMC2080595 DOI: 10.1261/rna.699907] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2007] [Accepted: 08/15/2007] [Indexed: 05/20/2023]
16
Bae E, Reiter NJ, Bingman CA, Kwan SS, Lee D, Phillips GN, Butcher SE, Brow DA. Structure and interactions of the first three RNA recognition motifs of splicing factor prp24. J Mol Biol 2007;367:1447-58. [PMID: 17320109 PMCID: PMC1939982 DOI: 10.1016/j.jmb.2007.01.078] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2006] [Revised: 01/24/2007] [Accepted: 01/31/2007] [Indexed: 11/21/2022]
17
Karaduman R, Fabrizio P, Hartmuth K, Urlaub H, Lührmann R. RNA structure and RNA-protein interactions in purified yeast U6 snRNPs. J Mol Biol 2005;356:1248-62. [PMID: 16410014 DOI: 10.1016/j.jmb.2005.12.013] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2005] [Revised: 12/01/2005] [Accepted: 12/03/2005] [Indexed: 11/21/2022]
18
Brenner TJ, Guthrie C. Genetic analysis reveals a role for the C terminus of the Saccharomyces cerevisiae GTPase Snu114 during spliceosome activation. Genetics 2005;170:1063-80. [PMID: 15911574 PMCID: PMC1451163 DOI: 10.1534/genetics.105.042044] [Citation(s) in RCA: 68] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
19
Kwan SS, Brow DA. The N- and C-terminal RNA recognition motifs of splicing factor Prp24 have distinct functions in U6 RNA binding. RNA (NEW YORK, N.Y.) 2005;11:808-20. [PMID: 15811912 PMCID: PMC1370765 DOI: 10.1261/rna.2010905] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
20
Medenbach J, Schreiner S, Liu S, Lührmann R, Bindereif A. Human U4/U6 snRNP recycling factor p110: mutational analysis reveals the function of the tetratricopeptide repeat domain in recycling. Mol Cell Biol 2004;24:7392-401. [PMID: 15314151 PMCID: PMC506986 DOI: 10.1128/mcb.24.17.7392-7401.2004] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
21
Damianov A, Schreiner S, Bindereif A. Recycling of the U12-type spliceosome requires p110, a component of the U6atac snRNP. Mol Cell Biol 2004;24:1700-8. [PMID: 14749385 PMCID: PMC344176 DOI: 10.1128/mcb.24.4.1700-1708.2004] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
22
Brow DA. Allosteric cascade of spliceosome activation. Annu Rev Genet 2003;36:333-60. [PMID: 12429696 DOI: 10.1146/annurev.genet.36.043002.091635] [Citation(s) in RCA: 280] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
23
Rader SD, Guthrie C. A conserved Lsm-interaction motif in Prp24 required for efficient U4/U6 di-snRNP formation. RNA (NEW YORK, N.Y.) 2002;8:1378-92. [PMID: 12458792 PMCID: PMC1370345 DOI: 10.1017/s1355838202020010] [Citation(s) in RCA: 64] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
24
Ryan DE, Stevens SW, Abelson J. The 5' and 3' domains of yeast U6 snRNA: Lsm proteins facilitate binding of Prp24 protein to the U6 telestem region. RNA (NEW YORK, N.Y.) 2002;8:1011-33. [PMID: 12212846 PMCID: PMC1370313 DOI: 10.1017/s1355838202026092] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
25
Kuhn AN, Reichl EM, Brow DA. Distinct domains of splicing factor Prp8 mediate different aspects of spliceosome activation. Proc Natl Acad Sci U S A 2002;99:9145-9. [PMID: 12087126 PMCID: PMC123108 DOI: 10.1073/pnas.102304299] [Citation(s) in RCA: 67] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2002] [Accepted: 05/21/2002] [Indexed: 11/18/2022]  Open
26
Mougin A, Gottschalk A, Fabrizio P, Lührmann R, Branlant C. Direct probing of RNA structure and RNA-protein interactions in purified HeLa cell's and yeast spliceosomal U4/U6.U5 tri-snRNP particles. J Mol Biol 2002;317:631-49. [PMID: 11955014 DOI: 10.1006/jmbi.2002.5451] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
27
Kuhn AN, Brow DA. Suppressors of a cold-sensitive mutation in yeast U4 RNA define five domains in the splicing factor Prp8 that influence spliceosome activation. Genetics 2000;155:1667-82. [PMID: 10924465 PMCID: PMC1461211 DOI: 10.1093/genetics/155.4.1667] [Citation(s) in RCA: 65] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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