Plant iron nutrition: the long road from soil to seeds

Iron sensing, signalling and acquisition by microbes and plants under environmental stress: Use of iron-solubilizing bacteria in crop biofortification for sustainable agriculture

Iron is very crucial micronutrient prerequisite for growth of all cellular organisms including plants, microbes, animals and humans. Though iron (Fe) is present in abundance in earth's crust, but most of its forms present in soil are biologically unavailable, thus putting a constraint to utilize it. Plants and microorganisms maintain iron homeostasis to balance the supply of enough Fe for metabolism from their surrounding environments and to avoid excessive toxic levels. Microorganisms and plants employ different strategies for sensing, signaling, transportation and uptake of Fe under different types of stressed environments. Microbial communities present in soil and vicinity of roots contribute in biogeochemical cycling and uptake of different nutrients including Fe resulting into improved soil fertility and plant health. In this review, the regulation of iron uptake and transport under different kinds of biotic and abiotic stresses is described. In addition, the insights have been provided for enhancing bioavailability of Fe in sustainable agriculture practices. The inoculation of different crop plants with iron solubilizing microbes improved bioavailablilty of Fe in soil and increased plant growth and crop yield. Insights were provided about possible role of recent bioengineering techniques to improve Fe availability and uptake by plants. However, well-planned and large-scale field trials are required before recommending particular iron solubilizing microbes as biofertilizers for increasing Fe availability, improving plant development and crop yields in sustainable agriculture.

Lignin-based metal chelate fertilizers: preparation, properties and applications

Lignin, as a renewable natural polymer, is recognized as a promising metal chelating agent due to its reactive functional groups capable of chelating metal ions. However, the relatively limited number of reactive functional groups in lignin restricts its chelating capacity to a certain extent and hence limits its application as a metal chelating fertilizer. This review focuses on various lignin modification methods, including sulfonation, sulfomethylation, amination, oxidation, carboxymethylation, demethylation, and phenolization, which can increase the number of functional groups available for metal chelation in lignin. Furthermore, the methods for preparing lignin-based metal chelate fertilizers utilizing modified lignin with necessary classifications and summaries were systematically introduced. The application effects of lignin-based metal chelate fertilizers in plant cultivation are discussed, with particular emphasis on their role in enhancing plant nutrient absorption, improving soil fertility, alleviating plant stress, and reducing the uptake of heavy metals by crops. Overall, the aim of this review is to provide theoretical support and practical guidance for the further application of lignin in the agricultural field as an indispensable component in metal chelate fertilizers.

Environmental and Biological Drivers of Root Exudation

Root exudation is the process by which plants release organic and inorganic metabolites from their roots into the surrounding soil. Root exudation is a dynamic process and shapes plant-environment interactions at the root-soil interface. Little is known about the biological and environmental factors that shape the exuded metabolome, hereafter referred to as the exudome, despite its importance in structuring soil processes. Here, we emphasize plant physiological and morphological traits that modulate the exudome in a species- and developmental stage-specific manner. We further discuss how environmental factors drive exudation processes. We highlight evidence of a potential circadian exudation rhythm and further illustrate how the physical (temperature, structure), chemical (moisture, pH, nutrients, pollutants), and biological (micro- and macrofauna) properties of soil alter the root exudome composition and release patterns. Exploring the factors that directly or indirectly modulate exudation will enhance our understanding of how this dynamic process mediates plant-environment interactions.

Physiological, biochemical and elemental responses of grafted grapevines under drought stress: insights into tolerance mechanisms

The selection of appropriate grapevine grafts and optimizing irrigation practices for enhancing water use efficiency are critical for viticulture production in the arid regions of UAE, apart from mitigating the effects of changing environmental conditions. Extremely high arid temperatures leading to depleted soil moisture status limit grape production in the country. In order to streamline the production, it is imperative to focus on specific objectives of screening drought-tolerant grafts utilizing several laboratory analytical tools and irrigation management. Five grapevine cultivar-rootstock combinations were evaluated in an open field experiment under induced drought conditions by regulating irrigation at 100%, 75% and 50% field capacity (FC) in an arid region. The net photosynthetic rate increased in Flame Seedless [Formula: see text] Ramsey (V1), Thompson Seedless [Formula: see text] Ramsey (V2), and Crimson Seedless [Formula: see text] R110 (V3) at 50% FC. Stomatal conductance was reduced in V1, V3, Crimson Seedless [Formula: see text] Ramsey (V4) and Thompson Seedless x P1103 (V5) at 50% FC. Intercellular CO2 and transpiration rates were significantly reduced at 50% FC. Water use efficiency, calculated as Pn/gs ratio to relate photosynthesis to stomatal closure, was elevated in all the grafts at 75% FC and 50% FC compared to the control (100% FC). The relative water content (RWC) showed a declining trend in all the grafts with reduced water supply. Nevertheless, the V1 and V4 grafts exhibited the highest RWC at an FC of 50%. The V2 graft produced the highest total dry mass and fresh biomass compared to other grafts. The Chl a content decreased, but the Chl b content increased at 50% FC in V2. Lutein significantly decreased for V1, while V3 showed an increase at 50% FC. The N, P and K contents in all the grafts, except V3, showed an increasing trend at 50% FC. The scanning electron microscopy observations point to the strong responses of stomatal behaviour upon changes in irrigation, thus facilitating the drought tolerance of the grafts. The findings emphasize the importance of selecting drought-tolerant grapevine grafts, and our study results could serve as guideposts for developing sustainable viticulture in arid regions, providing valuable insights for future research and practical applications in grape production.

Ironing out the conflicts: iron supplementation reduces negatives bacterial interactions in the rhizosphere of an Atacama-endemic perennial grass

BACKGROUND

In plants, root exudates selectively influence the growth of bacteria that colonize the rhizosphere. Bacterial communities associated with root systems are involved in macro and micronutrients cycling and organic matter transformation. In particular, iron is an essential micronutrient required for the proper functioning of iron-containing enzymes in processes such as photosynthesis, respiration, biomolecule synthesis, redox homeostasis, and cell growth in plants. However, the impact of changes of iron availability on the structure and set of ecological interactions taking place in the rhizosphere remains poorly understood. In this study, field experiments were conducted to compare the effects of iron supplementation (0.1 and 0.5 mM of FeSO4) on the assembly of the bacterial community of rhizosphere soil and bulk soil in a perennial grass present in the Andes steppe of Atacama Desert.

RESULTS

The results indicated that the difference in beta diversity between bulk soil and rhizosphere soil detected before supplementation did not persist after iron supplementation, in addition, co-occurrence networks showed a significant reduction in negative interactions among soil bacteria, mainly in rare taxa (< 0.1% relative abundance).

CONCLUSIONS

These observations suggest that iron availability contributes to the differentiation between bulk soil and rhizosphere bacterial communities, a process that is linked to significant changes in the relative abundance of more abundant species (> 0.1% relative abundance) and with a decrease in the negative interactions in both compartments after metal exposure. The differential effect of iron on the competition/cooperation ratio between bulk soils and the rhizosphere microbiome supports the hypothesis that the host limits the degree of cooperation that can be achieved by the bacterial community associated with an organ dedicated to nutrient absorption.

The interaction of nutrient uptake with biotic and abiotic stresses in plants

Plants depend heavily on efficient nutrient uptake and utilization for optimal growth and development. However, plants are constantly subjected to a diverse array of biotic stresses, such as pathogen infections, insect pests, and herbivory, as well as abiotic stress like drought, salinity, extreme temperatures, and nutrient imbalances. These stresses significantly impact the plant's ability to take up nutrient and use it efficiency. Understanding how plants maintain nutrient uptake and use efficiency under biotic and abiotic stress conditions is crucial for improving crop resilience and sustainability. This review explores the recent advancements in elucidating the mechanisms underlying nutrient uptake and utilization efficiency in plants under such stress conditions. Our aim is to offer a comprehensive perspective that can guide the breeding of stress-tolerant and nutrition-efficient crop varieties, ultimately contributing to the advancement of sustainable agriculture.

Nanofertilizers for enhancing food production: A case study on microgreens enrichment using superparamagnetic iron oxide nanoparticles (SPIONs)

The study aimed to evaluate superparamagnetic iron oxide nanoparticles (SPIONS) as nanofertilizers to enrich Allium cepa vegetable productivity. The nanofertilizer was synthesized using iron salts and a weak base. Characterization via powder X-ray diffraction (PXRD), UV-Vis spectroscopy, and magnetometry confirmed Fe3O4-based nanomaterial formation. Germination assays were conducted in Petri dishes, each containing 50 seeds, with four groups tested: deionized water (G1), Fe2+ solution (G2), Fe3+ solution (G3), and SPION suspension (G4). Germination rates were 70 % for G1, 62 % for G4, 58 % for G2, and 44 % for G3. Root growth analysis demonstrated superior development in G4, indicating stimulation. Inductively Coupled Plasma Mass Spectrometry (ICP-MS) determined higher Fe absorption in Allium cepa enriched with nanoparticles compared to non-enriched vegetables. Thus, it is concluded that the nanoparticle exhibits promising effects as nanofertilizer.

Copper stress in rice: Perception, signaling, bioremediation and future prospects

Copper (Cu) is an indispensable micronutrient for plants, animals, and microorganisms and plays a vital role in different physiological processes. However, excessive Cu accumulation in agricultural soil, often through anthropogenic action, poses a potential risk to plant health and crop productivity. This review article provided a comprehensive overview of the available information regarding Cu dynamics in agricultural soils, major sources of Cu contamination, factors influencing its mobility and bioavailability, and mechanisms of Cu uptake and translocation in rice plants. This review examined the impact of Cu toxicity on the germination, growth, and photosynthesis of rice plants. It also highlighted molecular mechanisms underlying Cu stress signaling and the plant defense strategy, involving chelation, compartmentalization, and antioxidant responses. This review also identified significant areas that need further research, such as Cu uptake mechanism in rice, Cu signaling process, and the assessment of Cu-polluted paddy soil and rice toxicity under diverse environmental conditions. The development of rice varieties with reduced Cu accumulation through comprehensive breeding programs is also necessary. Regulatory measures, fungicide management, plant selection, soil and environmental investigation are recommended to prevent Cu buildup in agricultural lands to achieve sustainable agricultural goals.

Plant-microbe interactions in the rhizosphere for smarter and more sustainable crop fertilization: the case of PGPR-based biofertilizers

Biofertilizers based on plant growth promoting rhizobacteria (PGPR) are nowadays gaining increasingly attention as a modern tool for a more sustainable agriculture due to their ability in ameliorating root nutrient acquisition. For many years, most research was focused on the screening and characterization of PGPR functioning as nitrogen (N) or phosphorus (P) biofertilizers. However, with the increasing demand for food using far fewer chemical inputs, new investigations have been carried out to explore the potential use of such bacteria also as potassium (K), sulfur (S), zinc (Zn), or iron (Fe) biofertilizers. In this review, we update the use of PGPR as biofertilizers for a smarter and more sustainable crop production and deliberate the prospects of using microbiome engineering-based methods as potential tools to shed new light on the improvement of plant mineral nutrition. The current era of omics revolution has enabled the design of synthetic microbial communities (named SynComs), which are emerging as a promising tool that can allow the formulation of biofertilizers based on PGPR strains displaying multifarious and synergistic traits, thus leading to an increasingly efficient root acquisition of more than a single essential nutrient at the same time. Additionally, host-mediated microbiome engineering (HMME) leverages advanced omics techniques to reintroduce alleles coding for beneficial compounds, reinforcing positive plant-microbiome interactions and creating plants capable of producing their own biofertilizers. We also discusses the current use of PGPR-based biofertilizers and point out possible avenues of research for the future development of more efficient biofertilizers for a smarter and more precise crop fertilization. Furthermore, concerns have been raised about the effectiveness of PGPR-based biofertilizers in real field conditions, as their success in controlled experiments often contrasts with inconsistent field results. This discrepancy highlights the need for standardized protocols to ensure consistent application and reliable outcomes.

The Mechanisms of Molybdate Distribution and Homeostasis with Special Focus on the Model Plant Arabidopsis thaliana

This review article deals with the pathways of cellular and global molybdate distribution in plants, especially with a full overview for the model plant Arabidopsis thaliana. In its oxidized state as bioavailable molybdate, molybdenum can be absorbed from the environment. Especially in higher plants, molybdenum is indispensable as part of the molybdenum cofactor (Moco), which is responsible for functionality as a prosthetic group in a variety of essential enzymes like nitrate reductase and sulfite oxidase. Therefore, plants need mechanisms for molybdate import and transport within the organism, which are accomplished via high-affinity molybdate transporter (MOT) localized in different cells and membranes. Two different MOT families were identified. Legumes like Glycine max or Medicago truncatula have an especially increased number of MOT1 family members for supplying their symbionts with molybdate for nitrogenase activity. In Arabidopsis thaliana especially, the complete pathway followed by molybdate through the plant is traceable. Not only the uptake from soil by MOT1.1 and its distribution to leaves, flowers, and seeds by MOT2-family members was identified, but also that inside the cell. the transport trough the cytoplasm and the vacuolar storage mechanisms depending on glutathione were described. Finally, supplying the Moco biosynthesis complex by MOT1.2 and MOT2.1 was demonstrated.

Plant Iron Research in African Countries: Current "Hot Spots", Approaches, and Potentialities

Plant iron (Fe) nutrition and metabolism is a fascinating and challenging research topic; understanding the role of Fe in the life cycle of plants requires knowledge of Fe chemistry and biochemistry and their impact during development. Plant Fe nutritional status is dependent on several factors, including the surrounding biotic and abiotic environments, and influences crop yield and the nutritional quality of edible parts. The relevance of plant Fe research will further increase globally, particularly for Africa, which is expected to reach 2.5 billion people by 2050. The aim of this review is to provide an updated picture of plant Fe research conducted in African countries to favor its dissemination within the scientific community. Three main research hotspots have emerged, and all of them are related to the production of plants of superior quality, i.e., development of Fe-dense crops, development of varieties resilient to Fe toxicity, and alleviation of Fe deficiency, by means of Fe nanoparticles for sustainable agriculture. An intensification of research collaborations between the African research groups and plant Fe groups worldwide would be beneficial for the progression of the identified research topics.

Iron Homeostasis in Azotobacter vinelandii

Iron is an essential nutrient for all life forms. Specialized mechanisms exist in bacteria to ensure iron uptake and its delivery to key enzymes within the cell, while preventing toxicity. Iron uptake and exchange networks must adapt to the different environmental conditions, particularly those that require the biosynthesis of multiple iron proteins, such as nitrogen fixation. In this review, we outline the mechanisms that the model diazotrophic bacterium Azotobacter vinelandii uses to ensure iron nutrition and how it adapts Fe metabolism to diazotrophic growth.

Preparation of an Aminated Lignin/Fe(III)/Polyvinyl Alcohol Film: A Packaging Material with UV Resistance and Slow-Release Function

To reduce the usage of petroleum-based plastic products, a lignin-based film material named aminated lignin/Fe(III)/PVA was developed. The mixture of 8 g lignin, 12 mL diethylenetriamine, 200 mL NaOH solution (0.4 mol·L^-1), and 8 mL formaldehyde was heated at 85 °C for 4 h; after the aminated lignin was impregnated in the Fe(NO₃)₃ solution, a mixture of 3 g aminated lignin/Fe(III), 7 g PVA, and 200 mL NaOH solution (pH 8) was heated at 85 °C for 60 min; after 2 mL of glycerin was added, the mixture was spread on a glass plate to obtain the aminated lignin/Fe(III)/PVA film. This film demonstrated hydrophobicity, an UV-blocking function, and a good slow-release performance. Due to the formation of hydrogen bonds between the hydroxyl groups of lignin and PVA, the tensile strength, the elongation at break, and the fracture resistance of the film were 9.1%, 107.8%, and 21.9% higher than that of pure PVA film, respectively. The iron content of aminated lignin/Fe(III)/PVA was 1.06 wt%, which mainly existed in a trivalent form. The aminated lignin/Fe(III)/PVA film has the potential to be used as a food packaging material with anti-ultraviolet light function and can also be developed as other packaging materials, such as seedling bowls, pots for transplanting, and coating films during transport.

The Arabidopsis thaliana Gulono-1,4 γ-lactone oxidase 2 (GULLO2) facilitates iron transport from endosperm into developing embryos and affects seed coat suberization

Plants synthesize ascorbate (ASC) via the D-mannose/L-galactose pathway whereas animals produce ASC and H₂O₂via the UDP-glucose pathway, with Gulono-1,4 γ-lactone oxidases (GULLO) as the last step. A. thaliana has seven isoforms, GULLO1-7; previous in silico analysis suggested that GULLO2, mostly expressed in developing seeds, might be involved in iron (Fe) nutrition. We isolated atgullo2-1 and atgullo2-2 mutants, quantified ASC and H₂O₂ in developing siliques, Fe(III) reduction in immature embryos and seed coats. Surfaces of mature seed coats were analysed via atomic force and electron microscopies; suberin monomer and elemental compositions of mature seeds, including Fe, were profiled via chromatography and inductively coupled plasma-mass spectrometry. Lower levels of ASC and H₂O₂ in atgullo2 immature siliques are accompanied by an impaired Fe(III) reduction in seed coats and lower Fe content in embryos and seeds; atgullo2 seeds displayed reduced permeability and higher levels of C18:2 and C18:3 ω-hydroxyacids, the two predominant suberin monomers in A. thaliana seeds. We propose that GULLO2 contributes to ASC synthesis, for Fe(III) reduction into Fe(II). This step is critical for Fe transport from endosperm into developing embryos. We also show that alterations in GULLO2 activity affect suberin biosynthesis and accumulation in the seed coat.

Biofortification to avoid malnutrition in humans in a changing climate: Enhancing micronutrient bioavailability in seed, tuber, and storage roots

Malnutrition results in enormous socio-economic costs to the individual, their community, and the nation's economy. The evidence suggests an overall negative impact of climate change on the agricultural productivity and nutritional quality of food crops. Producing more food with better nutritional quality, which is feasible, should be prioritized in crop improvement programs. Biofortification refers to developing micronutrient -dense cultivars through crossbreeding or genetic engineering. This review provides updates on nutrient acquisition, transport, and storage in plant organs; the cross-talk between macro- and micronutrients transport and signaling; nutrient profiling and spatial and temporal distribution; the putative and functionally characterized genes/single-nucleotide polymorphisms associated with Fe, Zn, and β-carotene; and global efforts to breed nutrient-dense crops and map adoption of such crops globally. This article also includes an overview on the bioavailability, bioaccessibility, and bioactivity of nutrients as well as the molecular basis of nutrient transport and absorption in human. Over 400 minerals (Fe, Zn) and provitamin A-rich cultivars have been released in the Global South. Approximately 4.6 million households currently cultivate Zn-rich rice and wheat, while ~3 million households in sub-Saharan Africa and Latin America benefit from Fe-rich beans, and 2.6 million people in sub-Saharan Africa and Brazil eat provitamin A-rich cassava. Furthermore, nutrient profiles can be improved through genetic engineering in an agronomically acceptable genetic background. The development of "Golden Rice" and provitamin A-rich dessert bananas and subsequent transfer of this trait into locally adapted cultivars are evident, with no significant change in nutritional profile, except for the trait incorporated. A greater understanding of nutrient transport and absorption may lead to the development of diet therapy for the betterment of human health.

Monoubiquitinated MxIRT1 acts as an iron receptor to determine MxIRT1 vacuole degradation or plasma membrane recycling via endocytosis

IRON-REGULATED TRANSPORTER 1 (IRT1) is critical for iron uptake in roots, and its exocytosis to the plasma membrane (PM) is regulated by the iron status sensed by the histidine-rich domain (HRM). However, studies on the fate of IRT1 after fusion with PM in response to iron conditions are still limited. In this study, we found that K165 and K196 regulate the monoubiquitination of MxIRT1 (mUb-MxIRT1), which acts as a receptor delivering signals from HRM to downstream effectors such as clathrin to determine the fate of MxIRT1. Iron supply led MxIRT1 in the PM to monoubiquitin-dependent endocytosis which could be inhibited by endocytosis inhibitor TyrA23 or in the double site-directed mutant K165/K196R. Subsequently, the endocytosis pathway to the vacuole was inhibited by vacuolar protease inhibitor Leupeptin in excessive iron conditions and the inability of being able to respond to iron change, indicated by the protein accumulating in the PM, contributed to iron toxicity in K165/K196R transgenic Arabidopsis. With iron availability decreasing again, MxIRT1 could dock close to the PM waiting for to be recycled. Another monoubiquitination site, K26, was necessary for MxIRT1 Endoplasmic Reticulum (ER) export as site-directed mutant K26R lost the ability of PM targeting, and co-localized with the COPII subunit of the coat protein OsSec24. Therefore, after K26-directed ER export and iron-induced PM fusion, mUb-MxIRT1 determines subsequent vacuolar degradation or recycling to the PM via endocytosis for maintaining iron homeostasis.

Physiological Importance of Molybdate Transporter Family 1 in Feeding the Molybdenum Cofactor Biosynthesis Pathway in Arabidopsis thaliana

Molybdate uptake and molybdenum cofactor (Moco) biosynthesis were investigated in detail in the last few decades. The present study critically reviews our present knowledge about eukaryotic molybdate transporters (MOT) and focuses on the model plant Arabidopsis thaliana, complementing it with new experiments, filling missing gaps, and clarifying contradictory results in the literature. Two molybdate transporters, MOT1.1 and MOT1.2, are known in Arabidopsis, but their importance for sufficient molybdate supply to Moco biosynthesis remains unclear. For a better understanding of their physiological functions in molybdate homeostasis, we studied the impact of mot1.1 and mot1.2 knock-out mutants, including a double knock-out on molybdate uptake and Moco-dependent enzyme activity, MOT localisation, and protein–protein interactions. The outcome illustrates different physiological roles for Moco biosynthesis: MOT1.1 is plasma membrane located and its function lies in the efficient absorption of molybdate from soil and its distribution throughout the plant. However, MOT1.1 is not involved in leaf cell imports of molybdate and has no interaction with proteins of the Moco biosynthesis complex. In contrast, the tonoplast-localised transporter MOT1.2 exports molybdate stored in the vacuole and makes it available for re-localisation during senescence. It also supplies the Moco biosynthesis complex with molybdate by direct interaction with molybdenum insertase Cnx1 for controlled and safe sequestering.