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For: Donahue WF, Turczyk BM, Jarrell KA. Rapid gene cloning using terminator primers and modular vectors. Nucleic Acids Res 2002;30:e95. [PMID: 12235397 PMCID: PMC137120 DOI: 10.1093/nar/gnf094] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
Number Cited by Other Article(s)
1
Lee S, Kim H, Aqsa, Jeung K, Won M, Ro H. DAPE cloning with modified primers for producing designated lengths of 3' single-stranded ends in PCR products. PLoS One 2025;20:e0318015. [PMID: 39946422 PMCID: PMC11825038 DOI: 10.1371/journal.pone.0318015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2024] [Accepted: 01/07/2025] [Indexed: 02/16/2025]  Open
2
Ferro-Gallego P, Vila-Sanjurjo A, Valderrama Pereira AK, Porres Pérez G, Domínguez-Gerpe L. Circular PCR as an efficient and precise umbrella of methods for the generation of circular dsDNA with staggered nicks: Mechanism and types. Biol Methods Protoc 2024;9:bpae051. [PMID: 39139995 PMCID: PMC11319657 DOI: 10.1093/biomethods/bpae051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2024] [Revised: 07/11/2024] [Accepted: 07/18/2024] [Indexed: 08/15/2024]  Open
3
Krebs AS, Bierig T, Collu G, Benoit RM. Seamless insert-plasmid assembly at sub-terminal homologous sequences. Plasmid 2019;106:102445. [PMID: 31669339 DOI: 10.1016/j.plasmid.2019.102445] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 10/10/2019] [Accepted: 10/11/2019] [Indexed: 10/25/2022]
4
Benoit RM, Ostermeier C, Geiser M, Li JSZ, Widmer H, Auer M. Seamless Insert-Plasmid Assembly at High Efficiency and Low Cost. PLoS One 2016;11:e0153158. [PMID: 27073895 PMCID: PMC4830597 DOI: 10.1371/journal.pone.0153158] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2016] [Accepted: 03/16/2016] [Indexed: 01/28/2023]  Open
5
Auras BL, Oliveira VA, Terenzi H, Neves A, Iglesias BA. meso-Mono-[4-(1,4,7-triazacyclononanyl)]-tri(phenyl)]porphyrin and the respective zinc(ii)-complex: complete characterization and biomolecules binding abilities. Photochem Photobiol Sci 2016;15:564-79. [DOI: 10.1039/c6pp00016a] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
6
Yuan H, Peng L, Han Z, Xie JJ, Liu XP. Recombinant expression library of Pyrococcus furiosus constructed by high-throughput cloning: a useful tool for functional and structural genomics. Front Microbiol 2015;6:943. [PMID: 26441878 PMCID: PMC4566052 DOI: 10.3389/fmicb.2015.00943] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2015] [Accepted: 08/25/2015] [Indexed: 11/28/2022]  Open
7
Schmid-Burgk JL, Xie Z, Benenson Y. Hierarchical ligation-independent assembly of PCR fragments. Methods Mol Biol 2014;1116:49-58. [PMID: 24395356 DOI: 10.1007/978-1-62703-764-8_4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
8
Baumann T, Arndt KM, Müller KM. Directional cloning of DNA fragments using deoxyinosine-containing oligonucleotides and endonuclease V. BMC Biotechnol 2013;13:81. [PMID: 24090222 PMCID: PMC3856533 DOI: 10.1186/1472-6750-13-81] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2013] [Accepted: 09/25/2013] [Indexed: 02/04/2023]  Open
9
Chen WH, Qin ZJ, Wang J, Zhao GP. The MASTER (methylation-assisted tailorable ends rational) ligation method for seamless DNA assembly. Nucleic Acids Res 2013;41:e93. [PMID: 23444142 PMCID: PMC3632120 DOI: 10.1093/nar/gkt122] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2012] [Revised: 02/06/2013] [Accepted: 02/07/2013] [Indexed: 02/07/2023]  Open
10
A discussion of molecular biology methods for protein engineering. Mol Biotechnol 2012;51:67-102. [PMID: 21959889 DOI: 10.1007/s12033-011-9448-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
11
Schmid-Burgk JL, Xie Z, Frank S, Virreira Winter S, Mitschka S, Kolanus W, Murray A, Benenson Y. Rapid hierarchical assembly of medium-size DNA cassettes. Nucleic Acids Res 2012;40:e92. [PMID: 22422837 PMCID: PMC3384347 DOI: 10.1093/nar/gks236] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
12
DNA charge transport as a first step in coordinating the detection of lesions by repair proteins. Proc Natl Acad Sci U S A 2012;109:1856-61. [PMID: 22308447 DOI: 10.1073/pnas.1120063109] [Citation(s) in RCA: 80] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
13
Romano CA, Sontz PA, Barton JK. Mutants of the base excision repair glycosylase, endonuclease III: DNA charge transport as a first step in lesion detection. Biochemistry 2011;50:6133-45. [PMID: 21651304 PMCID: PMC3134277 DOI: 10.1021/bi2003179] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
14
Liu X, Shi R, Zou D, Li Z, Liu X, Chen Y, Yang X, Zhou Y, Zheng D. Positive selection vector using the KillerRed gene. Anal Biochem 2011;412:120-2. [DOI: 10.1016/j.ab.2011.01.034] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2010] [Revised: 01/20/2011] [Accepted: 01/25/2011] [Indexed: 11/25/2022]
15
T vector bearing KillerRed protein marker for red/white cloning screening. Anal Biochem 2010;405:272-4. [PMID: 20599648 DOI: 10.1016/j.ab.2010.06.031] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2010] [Revised: 06/08/2010] [Accepted: 06/15/2010] [Indexed: 11/20/2022]
16
Liu XP, Liu JH. The terminal 5' phosphate and proximate phosphorothioate promote ligation-independent cloning. Protein Sci 2010;19:967-73. [PMID: 20217896 DOI: 10.1002/pro.374] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
17
Use of sustainable chemistry to produce an acyl amino acid surfactant. Appl Microbiol Biotechnol 2010;86:1387-97. [PMID: 20094712 DOI: 10.1007/s00253-009-2431-8] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2009] [Revised: 12/23/2009] [Accepted: 12/28/2009] [Indexed: 10/19/2022]
18
Hauge B, Oggero C, Nguyen N, Fu C, Dong F. Single tube, high throughput cloning of inverted repeat constructs for double-stranded RNA expression. PLoS One 2009;4:e7205. [PMID: 19784365 PMCID: PMC2745663 DOI: 10.1371/journal.pone.0007205] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2009] [Accepted: 08/26/2009] [Indexed: 11/19/2022]  Open
19
Redox signaling between DNA repair proteins for efficient lesion detection. Proc Natl Acad Sci U S A 2009;106:15237-42. [PMID: 19720997 DOI: 10.1073/pnas.0908059106] [Citation(s) in RCA: 103] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
20
D'Ordine RL, Rydel TJ, Storek MJ, Sturman EJ, Moshiri F, Bartlett RK, Brown GR, Eilers RJ, Dart C, Qi Y, Flasinski S, Franklin SJ. Dicamba monooxygenase: structural insights into a dynamic Rieske oxygenase that catalyzes an exocyclic monooxygenation. J Mol Biol 2009;392:481-97. [PMID: 19616009 DOI: 10.1016/j.jmb.2009.07.022] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2009] [Revised: 07/08/2009] [Accepted: 07/09/2009] [Indexed: 11/29/2022]
21
Modular construction of plasmids through ligation-free assembly of vector components with oligonucleotide linkers. Biotechniques 2008;44:924-6. [PMID: 18533903 DOI: 10.2144/000112808] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
22
Bauman JD, Das K, Ho WC, Baweja M, Himmel DM, Clark AD, Oren DA, Boyer PL, Hughes SH, Shatkin AJ, Arnold E. Crystal engineering of HIV-1 reverse transcriptase for structure-based drug design. Nucleic Acids Res 2008;36:5083-92. [PMID: 18676450 PMCID: PMC2528191 DOI: 10.1093/nar/gkn464] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
23
Li W, Gao F. Creation of DNA overhangs by using modified DNA overhang cloning method. Appl Microbiol Biotechnol 2007;75:703-9. [PMID: 17308905 DOI: 10.1007/s00253-007-0852-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2006] [Revised: 01/11/2007] [Accepted: 01/21/2007] [Indexed: 11/24/2022]
24
Mi L. Molecular Cloning of Protein-Based Polymers. Biomacromolecules 2006;7:2099-107. [PMID: 16827576 DOI: 10.1021/bm050158h] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
25
Benoit RM, Wilhelm RN, Scherer-Becker D, Ostermeier C. An improved method for fast, robust, and seamless integration of DNA fragments into multiple plasmids. Protein Expr Purif 2005;45:66-71. [PMID: 16289702 DOI: 10.1016/j.pep.2005.09.022] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2005] [Revised: 09/14/2005] [Accepted: 09/25/2005] [Indexed: 10/25/2022]
26
Ailenberg M, Goldenberg NM, Silverman M. Description of a PCR-based technique for DNA splicing and mutagenesis by producing 5' overhangs with run through stop DNA synthesis utilizing Ara-C. BMC Biotechnol 2005;5:23. [PMID: 16137330 PMCID: PMC1208860 DOI: 10.1186/1472-6750-5-23] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2005] [Accepted: 09/01/2005] [Indexed: 11/10/2022]  Open
27
Lu Q. Seamless cloning and gene fusion. Trends Biotechnol 2005;23:199-207. [PMID: 15780712 PMCID: PMC7119129 DOI: 10.1016/j.tibtech.2005.02.008] [Citation(s) in RCA: 92] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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