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Coombe-Tennant T, Zhu X, Wu S, Loake GJ. Recent advances in paclitaxel biosynthesis and regulation. JOURNAL OF EXPERIMENTAL BOTANY 2025; 76:124-133. [PMID: 38780282 PMCID: PMC11659180 DOI: 10.1093/jxb/erae240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Accepted: 05/22/2024] [Indexed: 05/25/2024]
Abstract
Paclitaxel (PTX) is a high value plant natural product derived from Taxus (yew) species. This plant specialized metabolite (PSM) and its derivatives constitute a cornerstone for the treatment of an increasing variety of cancers. New applications for PTX also continue to emerge, further promoting demand for this WHO-designated essential medicine. Here we review recent advances in our understanding of PTX biosynthesis and its cognate regulation, which have been enabled by the development of transcriptomic approaches and the recent sequencing and annotation of three Taxus genomes. Collectively, this has resulted in the elucidation of two functional gene sets for PTX biosynthesis, unlocking new potential for the use of heterologous hosts to produce PTX. Knowledge of the PTX pathway also provides a valuable resource for understanding the regulation of this key PSM. Epigenetic regulation of PSM in plant cell culture is a major concern for PTX production, given the loss of PSM production in long-term cell cultures. Recent developments aim to design tools for manipulating epigenetic regulation, potentially providing a means to reverse the silencing of PSM caused by DNA methylation. Exciting times clearly lie ahead for our understanding of this key PSM and improving its production potential.
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Affiliation(s)
- Toby Coombe-Tennant
- Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, The King’s Buildings, Edinburgh EH9 3BF, UK
| | - Xiaoping Zhu
- Research Center of Siyuan Natural Pharmacy and Biotoxicology, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang Province 310058, China
- Joint Research Centre for Engineering Biology, Zhejiang University–University of Edinburgh Institute, Zhejiang University, Haining 314400, China
| | - Shihua Wu
- Research Center of Siyuan Natural Pharmacy and Biotoxicology, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang Province 310058, China
- Joint Research Centre for Engineering Biology, Zhejiang University–University of Edinburgh Institute, Zhejiang University, Haining 314400, China
- School of Ecology and Environment, Tibet University, Lhasa 850000, China
| | - Gary J Loake
- Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, The King’s Buildings, Edinburgh EH9 3BF, UK
- Joint Research Centre for Engineering Biology, Zhejiang University–University of Edinburgh Institute, Zhejiang University, Haining 314400, China
- Green Bioactives Ltd, Douglas House, Pentland Science Park, Bush Loan Rd, Penicuik EH26 0PL, UK
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Alcalde MA, Palazon J, Bonfill M, Hidalgo-Martinez D. Enhancing Centelloside Production in Centella asiatica Hairy Root Lines through Metabolic Engineering of Triterpene Biosynthetic Pathway Early Genes. PLANTS (BASEL, SWITZERLAND) 2023; 12:3363. [PMID: 37836103 PMCID: PMC10574710 DOI: 10.3390/plants12193363] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Revised: 09/20/2023] [Accepted: 09/22/2023] [Indexed: 10/15/2023]
Abstract
Centella asiatica is a medicinal plant with a rich tradition of use for its therapeutic properties. Among its bioactive compounds are centellosides, a group of triterpenoid secondary metabolites whose potent pharmacological activities have attracted significant attention. Metabolic engineering has emerged as a powerful biotechnological tool to enhance the production of target compounds. In this study, we explored the effects of overexpressing the squalene synthase (SQS) gene and transcription factor TSAR2 on various aspects of C. asiatica hairy root lines: the expression level of centelloside biosynthetic genes, morphological traits, as well as squalene, phytosterol, and centelloside content. Three distinct categories of transformed lines were obtained: LS, harboring At-SQS; LT, overexpressing TSAR2; and LST, simultaneously carrying both transgenes. These lines displayed noticeable alterations in morphological traits, including changes in branching rate and biomass production. Furthermore, we observed that the expression of T-DNA genes, particularly aux2 and rolC genes, significantly modulated the expression of pivotal genes involved in centelloside biosynthesis. Notably, the LS lines boasted an elevated centelloside content but concurrently displayed reduced phytosterol content, a finding that underscores the intriguing antagonistic relationship between phytosterol and triterpene pathways. Additionally, the inverse correlation between the centelloside content and morphological growth values observed in LS lines was countered by the action of TSAR2 in the LST and LT lines. This difference could be attributed to the simultaneous increase in the phytosterol content in the TSAR2-expressing lines, as these compounds are closely linked to root development. Overall, these discoveries offer valuable information for the biotechnological application of C. asiatica hairy roots and their potential to increase centelloside production.
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Affiliation(s)
- Miguel Angel Alcalde
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, 08028 Barcelona, Spain; (M.A.A.); (M.B.)
- Biotechnology, Health and Education Research Group, Posgraduate School, Cesar Vallejo University, Trujillo 13001, Peru
| | - Javier Palazon
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, 08028 Barcelona, Spain; (M.A.A.); (M.B.)
| | - Mercedes Bonfill
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, 08028 Barcelona, Spain; (M.A.A.); (M.B.)
| | - Diego Hidalgo-Martinez
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, 08028 Barcelona, Spain; (M.A.A.); (M.B.)
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Perez-Matas E, Hidalgo-Martinez D, Escrich A, Alcalde MA, Moyano E, Bonfill M, Palazon J. Genetic approaches in improving biotechnological production of taxanes: An update. FRONTIERS IN PLANT SCIENCE 2023; 14:1100228. [PMID: 36778697 PMCID: PMC9909606 DOI: 10.3389/fpls.2023.1100228] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 01/16/2023] [Indexed: 06/18/2023]
Abstract
Paclitaxel (PTX) and its derivatives are diterpene alkaloids widely used as chemotherapeutic agents in the treatment of various types of cancer. Due to the scarcity of PTX in nature, its production in cell cultures and plant organs is a major challenge for plant biotechnology. Although significant advances have been made in this field through the development of metabolic engineering and synthetic biology techniques, production levels remain insufficient to meet the current market demand for these powerful anticancer drugs. A key stumbling block is the difficulty of genetically transforming the gymnosperm Taxus spp. This review focuses on the progress made in improving taxane production through genetic engineering techniques. These include the overexpression of limiting genes in the taxane biosynthetic pathway and transcription factors involved in its regulation in Taxus spp. cell cultures and transformed roots, as well as the development and optimization of transformation techniques. Attempts to produce taxanes in heterologous organisms such as bacteria and yeasts are also described. Although promising results have been reported, the transfer of the entire PTX metabolic route has not been possible to date, and taxane biosynthesis is still restricted to Taxus cells and some endophytic fungi. The development of a synthetic organism other than Taxus cells capable of biotechnologically producing PTX will probably have to wait until the complete elucidation of its metabolic pathway.
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Affiliation(s)
- Edgar Perez-Matas
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, Barcelona, Spain
| | - Diego Hidalgo-Martinez
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, Barcelona, Spain
| | - Ainoa Escrich
- Departament de Medicina i Ciències de la Vida (MELIS), Universitat Pompeu Fabra, Barcelona, Spain
| | - Miguel Angel Alcalde
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, Barcelona, Spain
| | - Elisabeth Moyano
- Departament de Medicina i Ciències de la Vida (MELIS), Universitat Pompeu Fabra, Barcelona, Spain
| | - Mercedes Bonfill
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, Barcelona, Spain
| | - Javier Palazon
- Department of Biology, Healthcare and the Environment, Faculty of Pharmacy and Food Sciences, University of Barcelona, Barcelona, Spain
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Li T, Li B, Liao C, Zhang H, Wang L, Fu T, Xue S, Sun T, Xu X, Fan X, Li L, Liu G, Yang F, Ma X. Transcriptome analysis provides insights into light condition effect on paclitaxel biosynthesis in yew saplings. BMC PLANT BIOLOGY 2022; 22:577. [PMID: 36503377 PMCID: PMC9743728 DOI: 10.1186/s12870-022-03958-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Accepted: 11/23/2022] [Indexed: 06/17/2023]
Abstract
BACKGROUND Taxus is a rare gymnosperm plant that is the sole producer of the anticancer drug paclitaxel. The growth and development of Taxus is affected by environmental factors such as light. However, little is known about how light conditions affect growth and metabolic processes, especially paclitaxel biosynthesis. RESULTS In this study, we applied three different light conditions to Taxus chinensis young saplings and investigated the physiological response and gene expression. Our observations showed that exposure to high light led to oxidative stress, caused photoinhibition, and damaged the photosynthetic systems in T. chinensis. The paclitaxel content in T. chinensis leaves was significantly decreased after the light intensity increased. Transcriptomic analysis revealed that numerous genes involved in paclitaxel biosynthesis and phenylpropanoid metabolic pathways were downregulated under high light. We also analyzed the expression of JA signaling genes, bHLH, MYB, AP2/ERF transcription factors, and the CYP450 families that are potentially related to paclitaxel biosynthesis. We found that several CYP450s, MYB and AP2/ERF genes were induced by high light. These genes may play an important role in tolerance to excessive light or heat stress in T. chinensis. CONCLUSIONS Our study elucidates the molecular mechanism of the effects of light conditions on the growth and development of T. chinensis and paclitaxel biosynthesis, thus facilitating the artificial regeneration of Taxus and enhancing paclitaxel production.
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Affiliation(s)
- Taotao Li
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Bingbing Li
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Chunli Liao
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Huamin Zhang
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Lianzhe Wang
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Taotao Fu
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Shouyu Xue
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Tao Sun
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Xiaolan Xu
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Xin Fan
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Le Li
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Genglin Liu
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Fengling Yang
- College of Life Sciences and Engineering, Henan University of Urban Construction, Pingdingshan, 467036 Henan China
| | - Xuan Ma
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070 China
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Sanchez-Muñoz R, Perez-Mata E, Almagro L, Cusido RM, Bonfill M, Palazon J, Moyano E. A Novel Hydroxylation Step in the Taxane Biosynthetic Pathway: A New Approach to Paclitaxel Production by Synthetic Biology. Front Bioeng Biotechnol 2020; 8:410. [PMID: 32528936 PMCID: PMC7247824 DOI: 10.3389/fbioe.2020.00410] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2020] [Accepted: 04/14/2020] [Indexed: 11/13/2022] Open
Abstract
Engineered plant cell lines have the potential to achieve enhanced metabolite production rates, providing a high-yielding source of compounds of interest. Improving the production of taxanes, pharmacologically valuable secondary metabolites of Taxus spp., is hindered by an incomplete knowledge of the taxane biosynthetic pathway. Of the five unknown steps, three are thought to involve cytochrome P450-like hydroxylases. In the current work, after an in-depth in silico characterization of four candidate enzymes proposed in a previous cDNA-AFLP assay, TB506 was selected as a candidate for the hydroxylation of the taxane side chain. A docking assay indicated TB506 is active after the attachment of the side chain based on its affinity to the ligand 3'N-dehydroxydebenzoyltaxol. Finally, the involvement of TB506 in the last hydroxylation step of the paclitaxel biosynthetic pathway was confirmed by functional assays. The identification of this hydroxylase will contribute to the development of alternative sustainable paclitaxel production systems using synthetic biology techniques.
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Affiliation(s)
- Raul Sanchez-Muñoz
- Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, Barcelona, Spain
| | - Edgar Perez-Mata
- Secció de Fisiologia Vegetal, Facultat de Farmacia, Universitat de Barcelona, Barcelona, Spain
| | - Lorena Almagro
- Departamento de Biología Vegetal, Facultad de Biología, Universidad de Murcia, Murcia, Spain
| | - Rosa M. Cusido
- Secció de Fisiologia Vegetal, Facultat de Farmacia, Universitat de Barcelona, Barcelona, Spain
| | - Mercedes Bonfill
- Secció de Fisiologia Vegetal, Facultat de Farmacia, Universitat de Barcelona, Barcelona, Spain
| | - Javier Palazon
- Secció de Fisiologia Vegetal, Facultat de Farmacia, Universitat de Barcelona, Barcelona, Spain
| | - Elisabeth Moyano
- Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, Barcelona, Spain
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