Influence of Earthworm Activity on Soil Microbes and Soilborne Diseases of Vegetables

Dual-Purpose Vermicompost for the Growth Promotion and Suppression of Damping-Off Disease on Potted Vegetable Soybean

Vermicompost is applied as a soil amendment to promote plant growth and yield. It also helps to significantly reduce the incidence of soil-borne diseases. However, its efficiency depends on the type of earthworm from which it is formed. The current study aims to compare the effects of two vermicompost types derived from African nightcrawler (AF) and Tiger worm (TG) as a soil amendment to evaluate its potential for suppressing damping-off disease both in vitro and in vivo. It also aims to determine the effects of both vermicompost types on the growth and yield-related traits of potted Thai vegetable soybean [Glycine max (L.) Merrill] variety "Chiang Mai 84-2" grown under greenhouse conditions when amended to the soil at various application rates (1%, 2%, 3% w/w). AF vermicompost exhibited better suppression of damping-off disease than TG vermicompost in vitro and under greenhouse conditions. AF vermicompost performed significantly greater suppressive efficacy on the mycelial growth of Athelia rolfsii in vitro than TG vermicompost, indicated by 50% and 16% inhibition, respectively. Damping-off incidence on vegetable soybean seedlings grown in soil amended with AF vermicompost was significantly lower (21%) than in soil amended with TG vermicompost (32%) under greenhouse conditions. With an increased application rate of 1% to 2% or 3% for each vermicompost type, plant yields significantly enhanced, with no significant variations among the 2% and 3% rates. Applying vermicompost at 2% w/w through soil amendment was the appropriate rate for promoting the growth and yield of potted vegetable soybeans. The results can be used to guide the application of vermicompost to control soil-borne plant diseases, promote plant growth, and enhance yields, especially in terms of organic crop production. Further research is needed to evaluate its potential for other potted crops and protect against soil-borne diseases.

Plant Microbiome Engineering: Hopes or Hypes

Rhizosphere microbiome is a dynamic and complex zone of microbial communities. This complex plant-associated microbial community, usually regarded as the plant's second genome, plays a crucial role in plant health. It is unquestioned that plant microbiome collectively contributes to plant growth and fitness. It also provides a safeguard from plant pathogens, and induces tolerance in the host against abiotic stressors. The revolution in omics, gene-editing and sequencing tools have somehow led to unravel the compositions and latent interactions between plants and microbes. Similarly, besides standard practices, many biotechnological, (bio)chemical and ecological methods have also been proposed. Such platforms have been solely dedicated to engineer the complex microbiome by untangling the potential barriers, and to achieve better agriculture output. Yet, several limitations, for example, the biological obstacles, abiotic constraints and molecular tools that capably impact plant microbiome engineering and functionality, remained unaddressed problems. In this review, we provide a holistic overview of plant microbiome composition, complexities, and major challenges in plant microbiome engineering. Then, we unearthed all inevitable abiotic factors that serve as bottlenecks by discouraging plant microbiome engineering and functionality. Lastly, by exploring the inherent role of micro/macrofauna, we propose economic and eco-friendly strategies that could be harnessed sustainably and biotechnologically for resilient plant microbiome engineering.

Amelioration of Chromium-Induced Oxidative Stress by Combined Treatment of Selected Plant-Growth-Promoting Rhizobacteria and Earthworms via Modulating the Expression of Genes Related to Reactive Oxygen Species Metabolism in Brassica juncea

Chromium (Cr) toxicity leads to the enhanced production of reactive oxygen species (ROS), which are extremely toxic to the plant and must be minimized to protect the plant from oxidative stress. The potential of plant-growth-promoting rhizobacteria (PGPR) and earthworms in plant growth and development has been extensively studied. The present study was aimed at investigating the effect of two PGPR (Pseudomonas aeruginosa and Burkholderia gladioli) along with earthworms (Eisenia fetida) on the antioxidant defense system in Brassica juncea seedlings under Cr stress. The Cr toxicity reduced the fresh and dry weights of seedlings, enhanced the levels of superoxide anion (O₂•^-), hydrogen peroxide (H₂O₂), malondialdehyde (MDA), and electrolyte leakage (EL), which lead to membrane as well as the nuclear damage and reduced cellular viability in B. juncea seedlings. The activities of the antioxidant enzymes, viz., superoxide dismutase (SOD), guaiacol peroxidase (POD), ascorbate peroxidase (APOX), glutathione peroxidase (GPOX), dehydroascorbate reductase (DHAR), and glutathione reductase (GR) were increased; however, a reduction was observed in the activity of catalase (CAT) in the seedlings under Cr stress. Inoculation of the PGPR and the addition of earthworms enhanced the activities of all other antioxidant enzymes except GPOX, in which a reduction of the activity was observed. For total lipid- and water-soluble antioxidants and the non-enzymatic antioxidants, viz., ascorbic acid and glutathione, an enhance accumulation was observed upon the inoculation with PGPR and earthworms. The supplementation of PGPR with earthworms (combined treatment) reduced both the reactive oxygen species (ROS) and the MDA content by modulating the defense system of the plant. The histochemical studies also corroborated that the combined application of PGPR and earthworms reduced O₂•^-, H₂O₂, lipid peroxidation, and membrane and nuclear damage and improved cell viability. The expression of key antioxidant enzyme genes, viz., SOD, CAT, POD, APOX, GR, DHAR, and GST showed the upregulation of these genes at post-transcriptional level upon the combined treatment of the PGPR and earthworms, thereby corresponding to the improved plant biomass. However, a reduced expression of RBOH1 gene was noticed in seedlings supplemented under the effect of PGPR and earthworms grown under Cr stress. The results provided sufficient evidence regarding the role of PGPR and earthworms in the amelioration of Cr-induced oxidative stress in B. juncea.

Copper Nanomaterial Morphology and Composition Control Foliar Transfer through the Cuticle and Mediate Resistance to Root Fungal Disease in Tomato (Solanum lycopersicum)

Two copper nanomaterials (CuO nanoparticles [NPs] and Cu₃(PO₄)₂·3H₂O nanosheets) and CuSO₄ were applied to tomato (Solanum lycopersicum) leaves, and elemental Cu movement from the leaf surface through the cuticle and into the interior leaf tissue was monitored over 8 h. Two forms of nanoscale Cu were used to foliar treat tomato on a weekly basis in greenhouse and field experiments in the presence of the pathogen Fusarium oxysporum f. sp. lycopersici. For CuSO₄, Cu accumulation and retention in the cuticle was over 7-fold greater than the nanomaterials, demonstrating that nanoscale morphology and composition mediate Cu accumulation in leaf tissue. In the greenhouse, weekly foliar applications of the nanosheets and NPs increased seedling biomass by 90.9 and 93.3%, respectively, compared to diseased and ionic Cu controls. In the field, Cu₃(PO₄)₂·3H₂O nanosheets reduced disease progress by 26.0% and significantly increased fruit yield by over 45.5% per plant relative to the other treatments in diseased soil. These findings suggest that nanoscale nutrient chemical properties can be tuned to maximize and control movement through the cuticle and that interactions at the seedling leaf biointerface can lead to season-long benefit for tomato growing in the presence of Fusarium spp.

Suppression of Root-Knot Nematode by Vermicompost Tea Prepared From Different Curing Ages of Vermicompost

Suppression of root-knot nematodes (Meloidogyne spp.) by vermicompost tea (VCT) has been inconsistent. Greenhouse and laboratory trials were conducted to compare the effects of VCT prepared from different curing ages of vermicompost (VC) on root penetration, reproduction, and hatching of M. incognita. In the penetration experiment, zucchini (Cucurbita pepo) seedlings were drenched with VCT prepared from (i) uncured (UVC), (ii) partially cured (PVC), (iii) completely cured (CVC) vermicompost, and (iv) water or no vermicompost (NVC) 3 days prior to M. incognita inoculation. The experiment was repeated twice on cucumber (Cucumis sativus) and terminated one week after nematode inoculation. All three trials showed that UVC and PVC reduced (P ≤ 0.05) penetration of M. incognita compared with CVC and NVC. Two greenhouse trials showed that VCT from different curing ages of VC did not reduce the abundance of M. incognita juveniles in soil and eggs in roots 2.5 months after nematode inoculation. Two laboratory trials to examine hatching consistently showed that VCT from UVC and PVC suppressed hatching (P ≤ 0.05) compared with NVC, achieving 83.1% hatch reduction by UVC. Overall, VCT from UVC and PVC suppressed root penetration and hatching, but not the reproduction of M. incognita over time.

Effect of Leaf Mold Mulch, Biochar, and Earthworms on Mycorrhizal Colonization and Yield of Asparagus Affected by Fusarium Crown and Root Rot

Asparagus can suffer from a crown and root rot caused by Fusarium oxysporum f. sp. asparagi and F. proliferatum. The disease is exacerbated when allelopathic toxins from old, rotting asparagus crowns are present in the soil. To minimize the damage from the replant problem, three strategies were examined: (i) biochar, (ii) application of earthworms (Lumbricus terrestris), and (iii) leaf mold to serve as a compost mulch and food source for earthworms. In a greenhouse, asparagus transplants were grown in soil amended with pathogen-infested asparagus residues or in nonamended soil, then both types of soil were augmented with biochar, earthworms, the combination of biochar and earthworms, or no treatment. Biochar increased arbuscular mycorrhizae (AM) colonization by 170% and reduced the incidence of root lesions by 57%; however, plant weight was not affected by any of the soil treatments and there were no significant interactions among the main effects. In the absence of infested asparagus residues, biochar reduced plant growth by 32%. Field plots that had severe crown and root rot, along with two other fields that had never been planted to asparagus, were planted with asparagus crowns and treated with leaf mold mulch, earthworms plus leaf mold mulch, biochar, or biochar plus earthworms plus leaf mold mulch. Untreated plots served as the control treatment. One year later, asparagus roots sampled from plots in the two new fields had a threefold increase in AM colonization when treated with biochar compared with control plots. Biochar did not increase yield over the duration of the 2012 to 2014 harvests when compared with that of the control plots. No soil treatment affected root colonization by AM in the field where Fusarium crown and root rot was severe. Compared with the untreated control plots, the leaf mold mulch treatment applied alone increased the marketable yields in each year of harvest. Combining leaf mold with earthworms provided no added benefit. Soil amendment with leaf mulch alone may hold promise for improving asparagus production in newly planted asparagus fields.

Signal molecules mediate the impact of the earthworm Aporrectodea caliginosa on growth, development and defence of the plant Arabidopsis thaliana

Earthworms have generally a positive impact on plant growth, which is often attributed to a trophic mechanism: namely, earthworms increase the release of mineral nutrients from soil litter and organic matter. An alternative hypothesis has been proposed since the discovery of a signal molecule (Indole Acetic Acid) in earthworm faeces. In this study, we used methodologies developed in plant science to gain information on ecological mechanisms involved in plant-earthworm interaction, by looking at plant response to earthworm presence at a molecular level. First, we looked at plant overall response to earthworm faeces in an in vitro device where only signal molecules could have an effect on plant growth; we observed that earthworms were inducing positive or negative effects on different plant species. Then, using an Arabidopsis thaliana mutant with an impaired auxin transport, we demonstrated the potential of earthworms to stimulate root growth and to revert the dwarf mutant phenotype. Finally, we performed a comparative transcriptomic analysis of Arabidopsis thaliana in the presence and absence of earthworms; we found that genes modulated in the presence of earthworms are known to respond to biotic and abiotic stresses, or to the application of exogenous hormones. A comparison of our results with other studies found in databases revealed strong analogies with systemic resistance, induced by signal molecules emitted by Plant Growth Promoting Rhizobacteria and/or elicitors emitted by non-virulent pathogens. Signal molecules such as auxin and ethylene, which are considered as major in plant-microorganisms interactions, can also be of prior importance to explain plant-macroinvertebrates interactions. This could imply revisiting ecological theories which generally stress on the role of trophic relationships.

Microbial diversity of vermicompost bacteria that exhibit useful agricultural traits and waste management potential

Vermicomposting is a non-thermophilic, boioxidative process that involves earthworms and associated microbes. This biological organic waste decomposition process yields the biofertilizer namely the vermicompost. Vermicompost is a finely divided, peat like material with high porosity, good aeration, drainage, water holding capacity, microbial activity, excellent nutrient status and buffering capacity thereby resulting the required physiochemical characters congenial for soil fertility and plant growth. Vermicompost enhances soil biodiversity by promoting the beneficial microbes which inturn enhances plant growth directly by production of plant growth-regulating hormones and enzymes and indirectly by controlling plant pathogens, nematodes and other pests, thereby enhancing plant health and minimizing the yield loss. Due to its innate biological, biochemical and physiochemical properties, vermicompost may be used to promote sustainable agriculture and also for the safe management of agricultural, industrial, domestic and hospital wastes which may otherwise pose serious threat to life and environment.

Suppression of Verticillium Wilt of Eggplant by Earthworms

The role of earthworms in plant disease has received little attention. To address whether earthworms would affect the severity of Verticillium wilt of eggplant (Solanum melongena) in the field, we grew eggplants in experimental field plots that were naturally infested with Verticillium dahliae in 2005, 2006, and 2007. Three earthworm treatments were compared: (i) no treatment (untreated control), (ii) earthworm populations reduced via chemical eradicants (carbaryl or hot mustard) (reduced treatment), and (iii) earthworm populations increased by addition of adult Canadian nightcrawlers (Lumbricus terrestris, 11 earthworms per m²) (augmented treatment). Compared to the untreated control, the estimates of the area under the disease progress curve (AUDPC) were reduced while estimates of the canopy growth curve (CGC) and the final plant weights were increased in plots augmented with earthworms in all 3 years. In 2 out of 3 years, eggplant yield (weight and number of fruit) was increased in plots augmented with earthworms. When a carbaryl drench was used to reduce earthworm numbers, the treatment resulted in plants with more disease than in the untreated controls in 2005. However, in 2005 and 2006, carbaryl-treated plants had larger CGC values and higher yield than in the untreated controls and were not significantly different from the augmented plots. When a hot mustard extraction procedure was used to reduce earthworm densities in 2007, plant growth, yield, and disease variables did not differ from the untreated control. Although the effects of reducing earthworms were variable and difficult to explain, our findings suggest that augmenting earthworm populations can suppress Verticillium wilt of eggplant, and strategies that increase earthworm numbers may contribute to disease suppression.