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Lesser RP, Webber WRS, Miglioretti DL. Pan-cortical electrophysiologic changes underlying attention. Sci Rep 2024; 14:2680. [PMID: 38302535 PMCID: PMC10834435 DOI: 10.1038/s41598-024-52717-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Accepted: 01/23/2024] [Indexed: 02/03/2024] Open
Abstract
We previously reported that pan-cortical effects occur when cognitive tasks end afterdischarges. For this report, we analyzed wavelet cross-coherence changes during cognitive tasks used to terminate afterdischarges studying multiple time segments and multiple groups of inter-electrode-con distances. We studied 12 patients with intractable epilepsy, with 970 implanted electrode contacts, and 39,871 electrode contact combinations. When cognitive tasks ended afterdischarges, coherence varied similarly across the cortex throughout the tasks, but there were gradations with time, distance, and frequency: (1) They tended to progressively decrease relative to baseline with time and then to increase toward baseline when afterdischarges ended. (2) During most time segments, decreases from baseline were largest for the closest inter-contact distances, moderate for intermediate inter-contact distances, and smallest for the greatest inter-contact distances. With respect to our patients' intractable epilepsy, the changes found suggest that future therapies might treat regions beyond those closest to regions of seizure onset and treat later in a seizure's evolution. Similar considerations might apply to other disorders. Our findings also suggest that cognitive tasks can result in pan-cortical coherence changes that participate in underlying attention, perhaps complementing the better-known regional mechanisms.
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Affiliation(s)
- Ronald P Lesser
- Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
- Department of Neurological Surgery, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.
| | - W R S Webber
- Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA
| | - Diana L Miglioretti
- Department of Public Health Sciences, Davis, School of Medicine, University of California, Davis, CA, 95616, USA
- Kaiser Permanente Washington Health Research Institute, Seattle, WA, 98101, USA
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2
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Alkawadri R, Zaveri HP, Sheth KN, Spencer DD. Passive localization of the central sulcus during sleep based on intracranial EEG. Cereb Cortex 2022; 32:3726-3735. [PMID: 34921723 PMCID: PMC9764437 DOI: 10.1093/cercor/bhab443] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2021] [Revised: 10/30/2021] [Accepted: 11/09/2021] [Indexed: 11/14/2022] Open
Abstract
We test the performance of a novel operator-independent EEG-based method for passive identification of the central sulcus (CS) and sensorimotor (SM) cortex. We studied seven patients with intractable epilepsy undergoing intracranial EEG (icEEG) monitoring, in whom CS localization was accomplished by standard methods. Our innovative approach takes advantage of intrinsic properties of the primary motor cortex (MC), which exhibits enhanced icEEG band-power and coherence across the CS. For each contact, we computed a composite power, coherence, and entropy values for activity in the high gamma band (80-115) Hz of 6-10 min of NREM sleep. Statistically transformed EEG data values that did not reach a threshold (th) were set to 0. We computed a metric M based on the transformed values and the mean Euclidian distance of each contact from contacts with Z-scores higher than 0. The last step was implemented to accentuate local network activity. The SM cortex exhibited higher EEG-band-power than non-SM cortex (P < 0.0002). There was no significant difference between the motor/premotor and sensory cortices (P < 0.47). CS was localized in all patients with 0.4 < th < 0.6. The primary hand and leg motor areas showed the highest metric values followed by the tongue motor area. Higher threshold values were specific (94%) for the anterior bank of the CS but not sensitive (42%). Intermediate threshold values achieved an acceptable trade-off (0.4: 89% specific and 70% sensitive).
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Affiliation(s)
- Rafeed Alkawadri
- Address correspondence to Rafeed Alkawadri, Human Brain Mapping Program, University of Pittsburgh Medical Center, Pittsburgh, PA 15123, USA.
| | - Hitten P Zaveri
- Department of Neurology, Yale University School of Medicine, New Haven, CT 06510, USA
| | - Kevin N Sheth
- Department of Neurology, Yale University School of Medicine, New Haven, CT 06510, USA
| | - Dennis D Spencer
- Department of Neurosurgery, Yale University School of Medicine, New Haven, CT 06510, USA
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3
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Su TY, Hung PL, Chen C, Lin YJ, Peng SJ. Graph Theory-Based Electroencephalographic Connectivity and Its Association with Ketogenic Diet Effectiveness in Epileptic Children. Nutrients 2021; 13:nu13072186. [PMID: 34202047 PMCID: PMC8308392 DOI: 10.3390/nu13072186] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Revised: 06/20/2021] [Accepted: 06/22/2021] [Indexed: 12/13/2022] Open
Abstract
Ketogenic diet therapies (KDTs) are widely used treatments for epilepsy, but the factors influencing their responsiveness remain unknown. This study aimed to explore the predictors or associated factors for KDTs effectiveness by evaluating the subtle changes in brain functional connectivity (FC) before and after KDTs. Segments of interictal sleep electroencephalography (EEG) were acquired before and after six months of KDTs. Analyses of FC were based on network-based statistics and graph theory, with a focus on different frequency bands. Seventeen responders and 14 non-responders were enrolled. After six months of KDTs, the responders exhibited a significant functional connectivity strength decrease compared with the non-responders; reductions in global efficiency, clustering coefficient, and nodal strength in the beta frequency band for a consecutive range of weighted proportional thresholds were observed in the responders. The alteration of betweenness centrality was significantly and positively correlated with seizure reduction rate in alpha, beta, and theta frequency bands in weighted adjacency matrices with densities of 90%. We conclude that KDTs tended to modify minor-to-moderate-intensity brain connections; the reduction of global connectivity and the increment of betweenness centrality after six months of KDTs were associated with better KD effectiveness.
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Affiliation(s)
- Ting-Yu Su
- Division of Pediatric Neurology, Department of Pediatrics, Kaohsiung Chang Gung Memorial Hospital and Chang Gung University College of Medicine, Kaohsiung 83301, Taiwan; (T.-Y.S.); (P.-L.H.)
| | - Pi-Lien Hung
- Division of Pediatric Neurology, Department of Pediatrics, Kaohsiung Chang Gung Memorial Hospital and Chang Gung University College of Medicine, Kaohsiung 83301, Taiwan; (T.-Y.S.); (P.-L.H.)
| | - Chien Chen
- Department of Neurology, Neurological Institute, Taipei Veterans General Hospital and School of Medicine, National Yang Ming Chiao Tung University College of Medicine, Taipei 11217, Taiwan;
| | - Ying-Jui Lin
- Division of Pediatric Cardiology, Department of Pediatrics, Kaohsiung Chang Gung Memorial Hospital and Chang Gung University College of Medicine, Kaohsiung 83301, Taiwan;
| | - Syu-Jyun Peng
- Professional Master Program in Artificial Intelligence in Medicine, College of Medicine, Taipei Medical University, 19F, No.172-1, Sec. 2, Keelung Rd., Da’an Dist., Taipei City 10675, Taiwan
- Correspondence: ; Tel.: +886-2-66382736; Fax: +886-2-27321956
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4
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Conrad EC, Bernabei JM, Kini LG, Shah P, Mikhail F, Kheder A, Shinohara RT, Davis KA, Bassett DS, Litt B. The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG. Netw Neurosci 2020; 4:484-506. [PMID: 32537538 PMCID: PMC7286312 DOI: 10.1162/netn_a_00131] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Accepted: 02/10/2020] [Indexed: 12/12/2022] Open
Abstract
Network neuroscience applied to epilepsy holds promise to map pathological networks, localize seizure generators, and inform targeted interventions to control seizures. However, incomplete sampling of the epileptic brain because of sparse placement of intracranial electrodes may affect model results. In this study, we evaluate the sensitivity of several published network measures to incomplete spatial sampling and propose an algorithm using network subsampling to determine confidence in model results. We retrospectively evaluated intracranial EEG data from 28 patients implanted with grid, strip, and depth electrodes during evaluation for epilepsy surgery. We recalculated global and local network metrics after randomly and systematically removing subsets of intracranial EEG electrode contacts. We found that sensitivity to incomplete sampling varied significantly across network metrics. This sensitivity was largely independent of whether seizure onset zone contacts were targeted or spared from removal. We present an algorithm using random subsampling to compute patient-specific confidence intervals for network localizations. Our findings highlight the difference in robustness between commonly used network metrics and provide tools to assess confidence in intracranial network localization. We present these techniques as an important step toward translating personalized network models of seizures into rigorous, quantitative approaches to invasive therapy.
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Affiliation(s)
- Erin C. Conrad
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
| | - John M. Bernabei
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
- Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA
| | - Lohith G. Kini
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
- Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA
| | - Preya Shah
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
- Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA
| | - Fadi Mikhail
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
| | - Ammar Kheder
- Department of Neurology, Emory University, Atlanta, GA, USA
| | - Russell T. Shinohara
- Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania, Philadelphia, PA, USA
- Penn Statistics in Imaging and Visualization Center, University of Pennsylvania, Philadelphia, PA, USA
- Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, PA, USA
| | - Kathryn A. Davis
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
| | - Danielle S. Bassett
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
- Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA
- Department of Electrical and Systems Engineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA
- Department of Physics and Astronomy, College of Arts and Sciences, University of Pennsylvania, Philadelphia, PA, USA
- Department of Psychiatry, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
| | - Brian Litt
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
- Department of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA
- Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
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5
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Jamali-Dinan SS, Soltanian-Zadeh H, Bowyer SM, Almohri H, Dehghani H, Elisevich K, Nazem-Zadeh MR. A Combination of Particle Swarm Optimization and Minkowski Weighted K-Means Clustering: Application in Lateralization of Temporal Lobe Epilepsy. Brain Topogr 2020; 33:519-532. [PMID: 32347472 DOI: 10.1007/s10548-020-00770-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2019] [Accepted: 04/07/2020] [Indexed: 11/30/2022]
Abstract
K-Means is one of the most popular clustering algorithms that partitions observations into nonoverlapping subgroups based on a predefined similarity metric. Its drawbacks include a sensitivity to noisy features and a dependency of its resulting clusters upon the initial selection of cluster centroids resulting in the algorithm converging to local optima. Minkowski weighted K-Means (MWK-Means) addresses the issue of sensitivity to noisy features, but is sensitive to the initialization of clusters, and so the algorithm may similarly converge to local optima. Particle Swarm Optimization (PSO) uses a globalized search method to solve this issue. We present a hybrid Particle Swarm Optimization (PSO) + MWK-Means clustering algorithm to address all the above problems in a single framework, while maintaining benefits of PSO and MWK Means methods. This study investigated the utility of this approach in lateralizing the epileptogenic hemisphere for temporal lobe epilepsy (TLE) cases using magnetoencephalography (MEG) coherence source imaging (CSI) and diffusion tensor imaging (DTI). Using MEG-CSI, we analyzed preoperative resting state MEG data from 17 adults TLE patients with Engel class I outcomes to determine coherence at 54 anatomical sites and compared the results with 17 age- and gender-matched controls. Fiber-tracking was performed through the same anatomical sites using DTI data. Indices of both MEG coherence and DTI nodal degree were calculated. A PSO + MWK-Means clustering algorithm was applied to identify the side of temporal lobe epileptogenicity and distinguish between normal and TLE cases. The PSO module was aimed at identifying initial cluster centroids and assigning initial feature weights to cluster centroids and, hence, transferring to the MWK-Means module for the final optimal clustering solution. We demonstrated improvements with the use of the PSO + MWK-Means clustering algorithm compared to that of K-Means and MWK-Means independently. PSO + MWK-Means was able to successfully distinguish between normal and TLE in 97.2% and 82.3% of cases for DTI and MEG data, respectively. It also lateralized left and right TLE in 82.3% and 93.6% of cases for DTI and MEG data, respectively. The proposed optimization and clustering methodology for MEG and DTI features, as they relate to focal epileptogenicity, would enhance the identification of the TLE laterality in cases of unilateral epileptogenicity.
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Affiliation(s)
| | - Hamid Soltanian-Zadeh
- Control and Intelligent Processing Center of Excellence (CIPCE), School of Electrical and Computer Engineering, University of Tehran, Tehran, Iran.,Research Administration, Radiology, Henry Ford Health System, Detroit, MI, 48202, USA
| | - Susan M Bowyer
- Neurology Departments, Henry Ford Health System, Detroit, MI, 48202, USA
| | - Haidar Almohri
- Department of Industrial and Systems Engineering, Wayne State University, Detroit, MI, USA
| | - Hamed Dehghani
- Medical Physics, and Biomedical Engineering Department, Tehran University of Medical Sciences (TUMS), Tehran, Iran
| | - Kost Elisevich
- Department of Clinical Neurosciences, Spectrum Health, College of Human Medicine, Michigan State University, Grand Rapids, MI, 49503, USA
| | - Mohammad-Reza Nazem-Zadeh
- Medical Physics, and Biomedical Engineering Department, Tehran University of Medical Sciences (TUMS), Tehran, Iran. .,Research Center for Molecular and Cellular Imaging, Research Center for Science and Technology in Medicine, Tehran University of Medical Sciences (TUMS), Tehran, Iran.
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6
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Kuhlmann L, Lehnertz K, Richardson MP, Schelter B, Zaveri HP. Seizure prediction - ready for a new era. Nat Rev Neurol 2019; 14:618-630. [PMID: 30131521 DOI: 10.1038/s41582-018-0055-2] [Citation(s) in RCA: 224] [Impact Index Per Article: 37.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Epilepsy is a common disorder characterized by recurrent seizures. An overwhelming majority of people with epilepsy regard the unpredictability of seizures as a major issue. More than 30 years of international effort have been devoted to the prediction of seizures, aiming to remove the burden of unpredictability and to couple novel, time-specific treatment to seizure prediction technology. A highly influential review published in 2007 concluded that insufficient evidence indicated that seizures could be predicted. Since then, several advances have been made, including successful prospective seizure prediction using intracranial EEG in a small number of people in a trial of a real-time seizure prediction device. In this Review, we examine advances in the field, including EEG databases, seizure prediction competitions, the prospective trial mentioned and advances in our understanding of the mechanisms of seizures. We argue that these advances, together with statistical evaluations, set the stage for a resurgence in efforts towards the development of seizure prediction methodologies. We propose new avenues of investigation involving a synergy between mechanisms, models, data, devices and algorithms and refine the existing guidelines for the development of seizure prediction technology to instigate development of a solution that removes the burden of the unpredictability of seizures.
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Affiliation(s)
- Levin Kuhlmann
- Centre for Human Psychopharmacology, Swinburne University of Technology, Melbourne, Victoria, Australia.,Department of Medicine - St. Vincent's, The University of Melbourne, Parkville, Victoria, Australia.,Department of Biomedical Engineering, The University of Melbourne, Parkville, Victoria, Australia
| | - Klaus Lehnertz
- Department of Epileptology, University of Bonn, Bonn, Germany. .,Interdisciplinary Center for Complex Systems, University of Bonn, Bonn, Germany.
| | - Mark P Richardson
- Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK
| | - Björn Schelter
- Institute for Complex Systems and Mathematical Biology, University of Aberdeen, Aberdeen, UK
| | - Hitten P Zaveri
- Department of Neurology, Yale University, New Haven, CT, USA
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7
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Lesser RP, Webber WRS, Miglioretti DL, Pillai JJ, Agarwal S, Mori S, Morrison PF, Castagnola S, Lawal A, Lesser HJ. Cognitive effort decreases beta, alpha, and theta coherence and ends afterdischarges in human brain. Clin Neurophysiol 2019; 130:2169-2181. [PMID: 31399356 DOI: 10.1016/j.clinph.2019.07.007] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2019] [Revised: 07/11/2019] [Accepted: 07/12/2019] [Indexed: 12/22/2022]
Abstract
OBJECTIVE Mental activation has been reported to modify the occurrence of epileptiform activity. We studied its effect on afterdischarges. METHOD In 15 patients with implanted electrodes we presented cognitive tasks when afterdischarges occurred. We developed a wavelet cross-coherence function to analyze the electrocorticography before and after the tasks and compared findings when cognitive tasks did or did not result in afterdischarge termination. Six patients returned for functional MRI (fMRI) testing, using similar tasks. RESULTS Cognitive tasks often could terminate afterdischarges when direct abortive stimulation could not. Wavelet cross-coherence analysis showed that, when afterdischarges stopped, there was decreased coherence throughout the brain in the 7.13-22.53 Hz frequency ranges (p values 0.008-0.034). This occurred a) regardless of whether an area activated on fMRI and b) regardless of whether there were afterdischarges in the area. CONCLUSIONS It is known that cognitive tasks can alter localized or network synchronization. Our results show that they can change activity throughout the brain. These changes in turn can terminate localized epileptiform activity. SIGNIFICANCE Cognitive tasks result in diffuse brain changes that can modify focal brain activity. Combined with a seizure detection device, cognitive activation might provide a non-invasive method of terminating or modifying seizures.
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Affiliation(s)
- Ronald P Lesser
- Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA; Department of Neurosurgery, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
| | - W R S Webber
- Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
| | - Diana L Miglioretti
- Department of Public Health Sciences, University of California, Davis, School of Medicine, Davis, CA 95616, USA; Kaiser Permanente Washington Health Research Institute, Seattle, WA 98101, USA
| | - Jay J Pillai
- Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
| | - Shruti Agarwal
- Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
| | - Susumu Mori
- Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
| | - Peter F Morrison
- Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
| | - Stefano Castagnola
- Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
| | - Adeshola Lawal
- Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
| | - Helen J Lesser
- Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA
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8
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Khambhati AN, Kahn AE, Costantini J, Ezzyat Y, Solomon EA, Gross RE, Jobst BC, Sheth SA, Zaghloul KA, Worrell G, Seger S, Lega BC, Weiss S, Sperling MR, Gorniak R, Das SR, Stein JM, Rizzuto DS, Kahana MJ, Lucas TH, Davis KA, Tracy JI, Bassett DS. Functional control of electrophysiological network architecture using direct neurostimulation in humans. Netw Neurosci 2019; 3:848-877. [PMID: 31410383 PMCID: PMC6663306 DOI: 10.1162/netn_a_00089] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2019] [Accepted: 04/14/2019] [Indexed: 01/30/2023] Open
Abstract
Chronically implantable neurostimulation devices are becoming a clinically viable option for treating patients with neurological disease and psychiatric disorders. Neurostimulation offers the ability to probe and manipulate distributed networks of interacting brain areas in dysfunctional circuits. Here, we use tools from network control theory to examine the dynamic reconfiguration of functionally interacting neuronal ensembles during targeted neurostimulation of cortical and subcortical brain structures. By integrating multimodal intracranial recordings and diffusion-weighted imaging from patients with drug-resistant epilepsy, we test hypothesized structural and functional rules that predict altered patterns of synchronized local field potentials. We demonstrate the ability to predictably reconfigure functional interactions depending on stimulation strength and location. Stimulation of areas with structurally weak connections largely modulates the functional hubness of downstream areas and concurrently propels the brain towards more difficult-to-reach dynamical states. By using focal perturbations to bridge large-scale structure, function, and markers of behavior, our findings suggest that stimulation may be tuned to influence different scales of network interactions driving cognition. Brain stimulation devices capable of perturbing the physiological state of neural systems are rapidly gaining popularity for their potential to treat neurological and psychiatric disease. A root problem is that underlying dysfunction spans a large-scale network of brain regions, requiring the ability to control the complex interactions between multiple brain areas. Here, we use tools from network control theory to examine the dynamic reconfiguration of functionally interacting neuronal ensembles during targeted neurostimulation of cortical and subcortical brain structures. We demonstrate the ability to predictably reconfigure patterns of interactions between functional brain areas by modulating the strength and location of stimulation. Our findings have high significance for designing stimulation protocols capable of modulating distributed neural circuits in the human brain.
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Affiliation(s)
- Ankit N Khambhati
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Ari E Kahn
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Julia Costantini
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Youssef Ezzyat
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
| | - Ethan A Solomon
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Robert E Gross
- Department of Neurosurgery, Emory University Hospital, Atlanta, GA, USA
| | - Barbara C Jobst
- Department of Neurology, Dartmouth-Hitchcock Medical Center, Lebanon, NH, USA
| | - Sameer A Sheth
- Department of Neurosurgery, Baylor College of Medicine, Houston, TX, USA
| | - Kareem A Zaghloul
- Surgical Neurology Branch, National Institutes of Health, Bethesda, MD, USA
| | | | - Sarah Seger
- Department of Neurosurgery, University of Texas, Southwestern Medical Center, Dallas, TX, USA
| | - Bradley C Lega
- Department of Neurosurgery, University of Texas, Southwestern Medical Center, Dallas, TX, USA
| | - Shennan Weiss
- Department of Neurology, Thomas Jefferson University Hospital, Philadelphia, PA, USA
| | - Michael R Sperling
- Department of Neurology, Thomas Jefferson University Hospital, Philadelphia, PA, USA
| | - Richard Gorniak
- Department of Radiology, Thomas Jefferson University Hospital, Philadelphia, PA, USA
| | - Sandhitsu R Das
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
| | - Joel M Stein
- Department of Radiology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
| | - Daniel S Rizzuto
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
| | - Michael J Kahana
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
| | - Timothy H Lucas
- Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
| | - Kathryn A Davis
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
| | - Joseph I Tracy
- Department of Neurology, Thomas Jefferson University Hospital, Philadelphia, PA, USA
| | - Danielle S Bassett
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
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9
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Pizarro R, Richner T, Brodnick S, Thongpang S, Williams J, Van Veen B. Estimating cortical column sensory networks in rodents from micro-electrocorticograph (μECoG) recordings. Neuroimage 2017; 163:342-357. [PMID: 28951350 PMCID: PMC5716924 DOI: 10.1016/j.neuroimage.2017.09.043] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2017] [Accepted: 09/20/2017] [Indexed: 11/23/2022] Open
Abstract
Micro-electrocorticograph (μECoG) arrays offer the flexibility to record local field potentials (LFPs) from the surface of the cortex, using high density electrodes that are sub-mm in diameter. Research to date has not provided conclusive evidence for the underlying signal generation of μECoG recorded LFPs, or if μECoG arrays can capture network activity from the cortex. We studied the pervading view of the LFP signal by exploring the spatial scale at which the LFP can be considered elemental. We investigated the underlying signal generation and ability to capture functional networks by implanting, μECoG arrays to record sensory-evoked potentials in four rats. The organization of the sensory cortex was studied by analyzing the sensory-evoked potentials with two distinct modeling techniques: (1) The volume conduction model, that models the electrode LFPs with an electrostatic representation, generated by a single cortical generator, and (2) the dynamic causal model (DCM), that models the electrode LFPs with a network model, whose activity is generated by multiple interacting cortical sources. The volume conduction approach modeled activity from electrodes separated < 1000 μm, with reasonable accuracy but a network model like DCM was required to accurately capture activity > 1500 μm. The extrinsic network component in DCM was determined to be essential for accurate modeling of observed potentials. These results all point to the presence of a sensory network, and that μECoG arrays are able to capture network activity in the neocortex. The estimated DCM network models the functional organization of the cortex, as signal generators for the μECoG recorded LFPs, and provides hypothesis-testing tools to explore the brain.
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Affiliation(s)
- Ricardo Pizarro
- Department of Biomedical Engineering, University of Wisconsin-Madison, 1550 Engineering Drive, Madison, WI 53706, USA.
| | - Tom Richner
- Department of Biomedical Engineering, University of Wisconsin-Madison, 1550 Engineering Drive, Madison, WI 53706, USA
| | - Sarah Brodnick
- Department of Biomedical Engineering, University of Wisconsin-Madison, 1550 Engineering Drive, Madison, WI 53706, USA
| | - Sanitta Thongpang
- Department of Biomedical Engineering, University of Wisconsin-Madison, 1550 Engineering Drive, Madison, WI 53706, USA
| | - Justin Williams
- Department of Biomedical Engineering, University of Wisconsin-Madison, 1550 Engineering Drive, Madison, WI 53706, USA.
| | - Barry Van Veen
- Department of Electrical Engineering, University of Wisconsin-Madison, 1415 Engineering Drive, Madison, WI 53706, USA.
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10
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Jorge MS, Spindola L, Katata JHB, Anghinah R. Alpha band EEG coherence in healthy nonagenarians. ARQUIVOS DE NEURO-PSIQUIATRIA 2017; 75:609-613. [DOI: 10.1590/0004-282x20170102] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2017] [Accepted: 06/20/2017] [Indexed: 11/22/2022]
Abstract
ABSTRACT Electroencephalographic (EEG) coherence is a parameter that enables evaluation of cerebral connectivity. It may be related to the functional state of the brain. In the elderly, it may reflect the neuronal loss caused by aging. Objective To describe characteristics of coherence in nonagenarians. Methods We evaluated interhemispheric coherence for the alpha band in 42 cognitively normal individuals aged 90 to 101 years. Coherence values in the occipital electrode (O1O2), in the resting state with closed eyes, were calculated by means of spectral analysis using digital EEG EMSA 32 channels, 12 bits and a frequency of 200 Hz. Results The mean coherence value for the alpha band at O1O2 was 0.65 (SD 0.13). No significant differences were found between men and women. Conclusions The findings from this study did not show any decrease in interhemispheric coherence for the alpha band in cognitively normal nonagenarians. This may be useful as a standard value for this age group.
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11
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Hincapié AS, Kujala J, Mattout J, Pascarella A, Daligault S, Delpuech C, Mery D, Cosmelli D, Jerbi K. The impact of MEG source reconstruction method on source-space connectivity estimation: A comparison between minimum-norm solution and beamforming. Neuroimage 2017; 156:29-42. [PMID: 28479475 DOI: 10.1016/j.neuroimage.2017.04.038] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2016] [Revised: 04/01/2017] [Accepted: 04/15/2017] [Indexed: 01/11/2023] Open
Abstract
Despite numerous important contributions, the investigation of brain connectivity with magnetoencephalography (MEG) still faces multiple challenges. One critical aspect of source-level connectivity, largely overlooked in the literature, is the putative effect of the choice of the inverse method on the subsequent cortico-cortical coupling analysis. We set out to investigate the impact of three inverse methods on source coherence detection using simulated MEG data. To this end, thousands of randomly located pairs of sources were created. Several parameters were manipulated, including inter- and intra-source correlation strength, source size and spatial configuration. The simulated pairs of sources were then used to generate sensor-level MEG measurements at varying signal-to-noise ratios (SNR). Next, the source level power and coherence maps were calculated using three methods (a) L2-Minimum-Norm Estimate (MNE), (b) Linearly Constrained Minimum Variance (LCMV) beamforming, and (c) Dynamic Imaging of Coherent Sources (DICS) beamforming. The performances of the methods were evaluated using Receiver Operating Characteristic (ROC) curves. The results indicate that beamformers perform better than MNE for coherence reconstructions if the interacting cortical sources consist of point-like sources. On the other hand, MNE provides better connectivity estimation than beamformers, if the interacting sources are simulated as extended cortical patches, where each patch consists of dipoles with identical time series (high intra-patch coherence). However, the performance of the beamformers for interacting patches improves substantially if each patch of active cortex is simulated with only partly coherent time series (partial intra-patch coherence). These results demonstrate that the choice of the inverse method impacts the results of MEG source-space coherence analysis, and that the optimal choice of the inverse solution depends on the spatial and synchronization profile of the interacting cortical sources. The insights revealed here can guide method selection and help improve data interpretation regarding MEG connectivity estimation.
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Affiliation(s)
- Ana-Sofía Hincapié
- Psychology Department, University of Montreal, Quebec, Canada; Lyon Neuroscience Research Center, CRNL, INSERM, U1028 - CNRS - UMR5292, University Lyon 1, Brain Dynamics and Cognition Team, Lyon, France; Department of Computer Science, Pontificia Universidad Católica de Chile, Santiago de Chile, Chile; Escuela de Psicología, Pontificia Universidad Católica de Chile and Interdisciplinary Center for Neurosciences, Pontificia Universidad Católica de Chile, Santiago de Chile, Chile.
| | - Jan Kujala
- Lyon Neuroscience Research Center, CRNL, INSERM, U1028 - CNRS - UMR5292, University Lyon 1, Brain Dynamics and Cognition Team, Lyon, France; Department of Neuroscience and Biomedical Engineering, Aalto University, Espoo, Finland.
| | - Jérémie Mattout
- Lyon Neuroscience Research Center, CRNL, INSERM, U1028 - CNRS - UMR5292, University Lyon 1, Brain Dynamics and Cognition Team, Lyon, France.
| | - Annalisa Pascarella
- Consiglio Nazionale delle Ricerche (CNR - National Research Council), Rome, Italy.
| | | | - Claude Delpuech
- Lyon Neuroscience Research Center, CRNL, INSERM, U1028 - CNRS - UMR5292, University Lyon 1, Brain Dynamics and Cognition Team, Lyon, France; MEG Center, CERMEP, Lyon, France.
| | - Domingo Mery
- Department of Computer Science, Pontificia Universidad Católica de Chile, Santiago de Chile, Chile.
| | - Diego Cosmelli
- Escuela de Psicología, Pontificia Universidad Católica de Chile and Interdisciplinary Center for Neurosciences, Pontificia Universidad Católica de Chile, Santiago de Chile, Chile.
| | - Karim Jerbi
- Psychology Department, University of Montreal, Quebec, Canada; Lyon Neuroscience Research Center, CRNL, INSERM, U1028 - CNRS - UMR5292, University Lyon 1, Brain Dynamics and Cognition Team, Lyon, France.
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Groppe DM, Bickel S, Dykstra AR, Wang X, Mégevand P, Mercier MR, Lado FA, Mehta AD, Honey CJ. iELVis: An open source MATLAB toolbox for localizing and visualizing human intracranial electrode data. J Neurosci Methods 2017; 281:40-48. [PMID: 28192130 DOI: 10.1016/j.jneumeth.2017.01.022] [Citation(s) in RCA: 150] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Revised: 01/31/2017] [Accepted: 01/31/2017] [Indexed: 11/30/2022]
Abstract
BACKGROUND Intracranial electrical recordings (iEEG) and brain stimulation (iEBS) are invaluable human neuroscience methodologies. However, the value of such data is often unrealized as many laboratories lack tools for localizing electrodes relative to anatomy. To remedy this, we have developed a MATLAB toolbox for intracranial electrode localization and visualization, iELVis. NEW METHOD: iELVis uses existing tools (BioImage Suite, FSL, and FreeSurfer) for preimplant magnetic resonance imaging (MRI) segmentation, neuroimaging coregistration, and manual identification of electrodes in postimplant neuroimaging. Subsequently, iELVis implements methods for correcting electrode locations for postimplant brain shift with millimeter-scale accuracy and provides interactive visualization on 3D surfaces or in 2D slices with optional functional neuroimaging overlays. iELVis also localizes electrodes relative to FreeSurfer-based atlases and can combine data across subjects via the FreeSurfer average brain. RESULTS It takes 30-60min of user time and 12-24h of computer time to localize and visualize electrodes from one brain. We demonstrate iELVis's functionality by showing that three methods for mapping primary hand somatosensory cortex (iEEG, iEBS, and functional MRI) provide highly concordant results. COMPARISON WITH EXISTING METHODS: iELVis is the first public software for electrode localization that corrects for brain shift, maps electrodes to an average brain, and supports neuroimaging overlays. Moreover, its interactive visualizations are powerful and its tutorial material is extensive. CONCLUSIONS iELVis promises to speed the progress and enhance the robustness of intracranial electrode research. The software and extensive tutorial materials are freely available as part of the EpiSurg software project: https://github.com/episurg/episurg.
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Affiliation(s)
- David M Groppe
- Department of Psychology, University of Toronto, Toronto, ON M5SSG3, Canada; Department of Neurosurgery, Hofstra Northwell School of Medicine, and Feinstein Institute for Medical Research, Manhasset, NY 11030, USA.
| | - Stephan Bickel
- Department of Neurology, Montefiore Medical Center, Bronx, NY 10467, USA; Department of Neurology, Stanford University, Stanford, CA 94305, USA
| | - Andrew R Dykstra
- Department of Neurology, Ruprecht-Karls-Universität Heidelberg, 69120 Heidelberg, Germany
| | - Xiuyuan Wang
- Department of Neurology, New York University School of Medicine, New York, NY 10016, USA; Department of Radiology, New York University School of Medicine, New York, NY 10016, USA
| | - Pierre Mégevand
- Department of Neurosurgery, Hofstra Northwell School of Medicine, and Feinstein Institute for Medical Research, Manhasset, NY 11030, USA; Division of Neurology, Department of Clinical Neuroscience, Hôpitaux Universitaires de Genève, Geneva 1211, Switzerland
| | - Manuel R Mercier
- Department of Neurology, Montefiore Medical Center, Bronx, NY 10467, USA; Centre de Recherche Cerveau et Cognition (CerCo), CNRS, Université Paul Sabatier, UMR5549, CHU Purpan, Toulouse, France; Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA
| | - Fred A Lado
- Department of Neurology, Montefiore Medical Center, Bronx, NY 10467, USA; Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA
| | - Ashesh D Mehta
- Department of Neurosurgery, Hofstra Northwell School of Medicine, and Feinstein Institute for Medical Research, Manhasset, NY 11030, USA
| | - Christopher J Honey
- Department of Psychology, University of Toronto, Toronto, ON M5SSG3, Canada; Department of Psychological & Brain Sciences, Johns Hopkins University, Baltimore, MD 21218, USA
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Interictal Infraslow Activity in Stereoelectroencephalography: From Focus to Network. J Clin Neurophysiol 2017; 33:141-8. [PMID: 26491857 DOI: 10.1097/wnp.0000000000000236] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
Abstract
PURPOSE Infraslow activity (ISA) occurring during the interictal state in focal epilepsy is largely unstudied. In this exploratory analysis, the authors aimed to characterize features of interictal ISA in a cohort of patients studied by stereoelectroencephography. METHODS The interictal stereoelectroencephography records for 15 consecutive adult patients were retrospectively analyzed, after application of both conventional (1.6-70 Hz) and infraslow (0.01-0.1 Hz) bandpass filters. Visual analysis was complemented by time-frequency analysis to quantify the change in ISA power over hours. Linear correlation coefficient (R) calculations were used to map interictal connectivity in the infraslow band. RESULTS Interictal ISA background fluctuations were present throughout the interictal state in all patients, manifesting as recurrent and stereotyped oscillations. These oscillations had an apparent modulatory effect on conventional-band activities and spikes ("spike-crested oscillations"). In the infraslow band, the correlations between electrode contacts were shown to have a stable structure over time. CONCLUSIONS Infraslow activity exists as a fundamental component of wideband cortical dynamics in focal epilepsy, with features suggestive of scale-free (1/f) dynamics: evidence of phase-amplitude coupling and functional connectivity in the infraslow band. Rather than viewed as a focal paroxysmal activity, interictal ISA may be better understood as a network process, although this requires further study.
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Khambhati AN, Bassett DS, Oommen BS, Chen SH, Lucas TH, Davis KA, Litt B. Recurring Functional Interactions Predict Network Architecture of Interictal and Ictal States in Neocortical Epilepsy. eNeuro 2017; 4:ENEURO.0091-16.2017. [PMID: 28303256 PMCID: PMC5343278 DOI: 10.1523/eneuro.0091-16.2017] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2016] [Revised: 01/09/2017] [Accepted: 01/10/2017] [Indexed: 01/10/2023] Open
Abstract
Human epilepsy patients suffer from spontaneous seizures, which originate in brain regions that also subserve normal function. Prior studies demonstrate focal, neocortical epilepsy is associated with dysfunction, several hours before seizures. How does the epileptic network perpetuate dysfunction during baseline periods? To address this question, we developed an unsupervised machine learning technique to disentangle patterns of functional interactions between brain regions, or subgraphs, from dynamic functional networks constructed from approximately 100 h of intracranial recordings in each of 22 neocortical epilepsy patients. Using this approach, we found: (1) subgraphs from ictal (seizure) and interictal (baseline) epochs are topologically similar, (2) interictal subgraph topology and dynamics can predict brain regions that generate seizures, and (3) subgraphs undergo slower and more coordinated fluctuations during ictal epochs compared to interictal epochs. Our observations suggest that seizures mark a critical shift away from interictal states that is driven by changes in the dynamical expression of strongly interacting components of the epileptic network.
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Affiliation(s)
- Ankit N. Khambhati
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104
| | - Danielle S. Bassett
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104
- Department of Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, PA 19104
| | - Brian S. Oommen
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104
| | - Stephanie H. Chen
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104
| | - Timothy H. Lucas
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104
- Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia, PA 19104
| | - Kathryn A. Davis
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104
| | - Brian Litt
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104
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15
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Dickten H, Porz S, Elger CE, Lehnertz K. Weighted and directed interactions in evolving large-scale epileptic brain networks. Sci Rep 2016; 6:34824. [PMID: 27708381 PMCID: PMC5052583 DOI: 10.1038/srep34824] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2016] [Accepted: 09/21/2016] [Indexed: 01/03/2023] Open
Abstract
Epilepsy can be regarded as a network phenomenon with functionally and/or structurally aberrant connections in the brain. Over the past years, concepts and methods from network theory substantially contributed to improve the characterization of structure and function of these epileptic networks and thus to advance understanding of the dynamical disease epilepsy. We extend this promising line of research and assess-with high spatial and temporal resolution and using complementary analysis approaches that capture different characteristics of the complex dynamics-both strength and direction of interactions in evolving large-scale epileptic brain networks of 35 patients that suffered from drug-resistant focal seizures with different anatomical onset locations. Despite this heterogeneity, we find that even during the seizure-free interval the seizure onset zone is a brain region that, when averaged over time, exerts strongest directed influences over other brain regions being part of a large-scale network. This crucial role, however, manifested by averaging on the population-sample level only - in more than one third of patients, strongest directed interactions can be observed between brain regions far off the seizure onset zone. This may guide new developments for individualized diagnosis, treatment and control.
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Affiliation(s)
- Henning Dickten
- Department of Epileptology, University of Bonn, Sigmund-Freud-Straße 25, 53105 Bonn, Germany.,Helmholtz-Institute for Radiation and Nuclear Physics, University of Bonn, Nussallee 14-16, 53115 Bonn, Germany.,Interdisciplinary Center for Complex Systems, University of Bonn, Brühler Straße 7, 53175 Bonn, Germany
| | - Stephan Porz
- Department of Epileptology, University of Bonn, Sigmund-Freud-Straße 25, 53105 Bonn, Germany.,Helmholtz-Institute for Radiation and Nuclear Physics, University of Bonn, Nussallee 14-16, 53115 Bonn, Germany
| | - Christian E Elger
- Department of Epileptology, University of Bonn, Sigmund-Freud-Straße 25, 53105 Bonn, Germany
| | - Klaus Lehnertz
- Department of Epileptology, University of Bonn, Sigmund-Freud-Straße 25, 53105 Bonn, Germany.,Helmholtz-Institute for Radiation and Nuclear Physics, University of Bonn, Nussallee 14-16, 53115 Bonn, Germany.,Interdisciplinary Center for Complex Systems, University of Bonn, Brühler Straße 7, 53175 Bonn, Germany
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16
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Khambhati AN, Davis KA, Lucas TH, Litt B, Bassett DS. Virtual Cortical Resection Reveals Push-Pull Network Control Preceding Seizure Evolution. Neuron 2016; 91:1170-1182. [PMID: 27568515 PMCID: PMC5017915 DOI: 10.1016/j.neuron.2016.07.039] [Citation(s) in RCA: 135] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2016] [Revised: 05/31/2016] [Accepted: 07/22/2016] [Indexed: 12/17/2022]
Abstract
In ∼20 million people with drug-resistant epilepsy, focal seizures originating in dysfunctional brain networks will often evolve and spread to surrounding tissue, disrupting function in otherwise normal brain regions. To identify network control mechanisms that regulate seizure spread, we developed a novel tool for pinpointing brain regions that facilitate synchronization in the epileptic network. Our method measures the impact of virtually resecting putative control regions on synchronization in a validated model of the human epileptic network. By applying our technique to time-varying functional networks, we identified brain regions whose topological role is to synchronize or desynchronize the epileptic network. Our results suggest that greater antagonistic push-pull interaction between synchronizing and desynchronizing brain regions better constrains seizure spread. These methods, while applied here to epilepsy, are generalizable to other brain networks and have wide applicability in isolating and mapping functional drivers of brain dynamics in health and disease.
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Affiliation(s)
- Ankit N Khambhati
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Kathryn A Davis
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA; Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Timothy H Lucas
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA; Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Brian Litt
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA; Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Danielle S Bassett
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA; Department of Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, PA 19104, USA.
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Nazem-Zadeh MR, Bowyer SM, Moran JE, Davoodi-Bojd E, Zillgitt A, Bagher-Ebadian H, Mahmoudi F, Elisevich KV, Soltanian-Zadeh H. Application of MEG coherence in lateralization of mTLE. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2016:5925-5928. [PMID: 28325030 PMCID: PMC5540681 DOI: 10.1109/embc.2016.7592077] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Magnetoencephalography (MEG) is a noninvasive imaging method for localization of focal epileptiform activity in patients with epilepsy. This study investigates the cerebral functional abnormalities quantified by MEG coherence laterality in mesial temporal lobe epilepsy (mTLE). Resting state MEG data was analyzed using MEG coherence source imaging (MEG-CSI) method to determine the coherence in 54 anatomical sites in 12 adult mTLE patients and 12 age- and gender-matched controls. MEG coherence laterality, after Bonferroni adjustment, showed significant differences for right versus left mTLE in insular cortex and both lateral orbitofrontal and superior temporal gyri (p<;0.025). None of these anatomical sites showed statistically significant differences in coherence laterality between right and left sides of controls. Coherence laterality was in agreement with the declared side of epileptogenicity in insular cortex (in 75% of patients) and both lateral orbitofrontal (83%) and superior temporal gyri (84%). Combining all significant laterality indices improved the lateralization accuracy to 92%. The proposed methodology for using MEG to investigate the abnormalities related to focal epileptogenicity and propagation can provide a further means of noninvasive lateralization.
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18
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Nazem-Zadeh MR, Bowyer SM, Moran JE, Davoodi-Bojd E, Zillgitt A, Weiland BJ, Bagher-Ebadian H, Mahmoudi F, Elisevich K, Soltanian-Zadeh H. MEG Coherence and DTI Connectivity in mTLE. Brain Topogr 2016; 29:598-622. [PMID: 27060092 PMCID: PMC5542022 DOI: 10.1007/s10548-016-0488-0] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2015] [Accepted: 04/04/2016] [Indexed: 12/11/2022]
Abstract
Magnetoencephalography (MEG) is a noninvasive imaging method for localization of focal epileptiform activity in patients with epilepsy. Diffusion tensor imaging (DTI) is a noninvasive imaging method for measuring the diffusion properties of the underlying white matter tracts through which epileptiform activity is propagated. This study investigates the relationship between the cerebral functional abnormalities quantified by MEG coherence and structural abnormalities quantified by DTI in mesial temporal lobe epilepsy (mTLE). Resting state MEG data was analyzed using MEG coherence source imaging (MEG-CSI) method to determine the coherence in 54 anatomical sites in 17 adult mTLE patients with surgical resection and Engel class I outcome, and 17 age- and gender- matched controls. DTI tractography identified the fiber tracts passing through these same anatomical sites of the same subjects. Then, DTI nodal degree and laterality index were calculated and compared with the corresponding MEG coherence and laterality index. MEG coherence laterality, after Bonferroni adjustment, showed significant differences for right versus left mTLE in insular cortex and both lateral orbitofrontal and superior temporal gyri (p < 0.017). Likewise, DTI nodal degree laterality, after Bonferroni adjustment, showed significant differences for right versus left mTLE in gyrus rectus, insular cortex, precuneus and superior temporal gyrus (p < 0.017). In insular cortex, MEG coherence laterality correlated with DTI nodal degree laterality ([Formula: see text] in the cases of mTLE. None of these anatomical sites showed statistically significant differences in coherence laterality between right and left sides of the controls. Coherence laterality was in agreement with the declared side of epileptogenicity in insular cortex (in 82 % of patients) and both lateral orbitofrontal (88 %) and superior temporal gyri (88 %). Nodal degree laterality was also in agreement with the declared side of epileptogenicity in gyrus rectus (in 88 % of patients), insular cortex (71 %), precuneus (82 %) and superior temporal gyrus (94 %). Combining all significant laterality indices improved the lateralization accuracy to 94 % and 100 % for the coherence and nodal degree laterality indices, respectively. The associated variations in diffusion properties of fiber tracts quantified by DTI and coherence measures quantified by MEG with respect to epileptogenicity possibly reflect the chronic microstructural cerebral changes associated with functional interictal activity. The proposed methodology for using MEG and DTI to investigate diffusion abnormalities related to focal epileptogenicity and propagation may provide a further means of noninvasive lateralization.
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Affiliation(s)
| | - Susan M. Bowyer
- Neurology, Henry Ford Health System, Detroit, MI, 48202, USA
| | - John E. Moran
- Neurology, Henry Ford Health System, Detroit, MI, 48202, USA
| | | | - Andrew Zillgitt
- Neurology, Henry Ford Health System, Detroit, MI, 48202, USA
| | - Barbara J. Weiland
- Institute of Cognitive Science University of Colorado Boulder, Boulder, CO, 80309 USA,
| | - Hassan Bagher-Ebadian
- Research Administration, Henry Ford Health System, Detroit, MI, 48202, USA
- Radiation Oncology Departments, Henry Ford Health System, Detroit, MI, 48202, USA
| | - Fariborz Mahmoudi
- Research Administration, Henry Ford Health System, Detroit, MI, 48202, USA
- Computer and IT engineering Faculty, Islamic Azad University, Qazvin Branch, Iran
| | - Kost Elisevich
- Department of Clinical Neurosciences, Spectrum Health System, Division of Neurosurgery, Michigan State University, Grand Rapids, MI, 49503, USA,
| | - Hamid Soltanian-Zadeh
- Research Administration, Henry Ford Health System, Detroit, MI, 48202, USA
- Control and Intelligent Processing Center of Excellence (CIPCE), School of Electrical and Computer Engineering, University of Tehran, Tehran, Iran,
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Khambhati AN, Davis KA, Oommen BS, Chen SH, Lucas TH, Litt B, Bassett DS. Dynamic Network Drivers of Seizure Generation, Propagation and Termination in Human Neocortical Epilepsy. PLoS Comput Biol 2015; 11:e1004608. [PMID: 26680762 PMCID: PMC4682976 DOI: 10.1371/journal.pcbi.1004608] [Citation(s) in RCA: 126] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2015] [Accepted: 10/16/2015] [Indexed: 12/16/2022] Open
Abstract
The epileptic network is characterized by pathologic, seizure-generating 'foci' embedded in a web of structural and functional connections. Clinically, seizure foci are considered optimal targets for surgery. However, poor surgical outcome suggests a complex relationship between foci and the surrounding network that drives seizure dynamics. We developed a novel technique to objectively track seizure states from dynamic functional networks constructed from intracranial recordings. Each dynamical state captures unique patterns of network connections that indicate synchronized and desynchronized hubs of neural populations. Our approach suggests that seizures are generated when synchronous relationships near foci work in tandem with rapidly changing desynchronous relationships from the surrounding epileptic network. As seizures progress, topographical and geometrical changes in network connectivity strengthen and tighten synchronous connectivity near foci-a mechanism that may aid seizure termination. Collectively, our observations implicate distributed cortical structures in seizure generation, propagation and termination, and may have practical significance in determining which circuits to modulate with implantable devices.
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Affiliation(s)
- Ankit N. Khambhati
- Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Kathryn A. Davis
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Brian S. Oommen
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Stephanie H. Chen
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Timothy H. Lucas
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Brian Litt
- Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
| | - Danielle S. Bassett
- Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Penn Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
- Department of Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
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Slow Spatial Recruitment of Neocortex during Secondarily Generalized Seizures and Its Relation to Surgical Outcome. J Neurosci 2015; 35:9477-90. [PMID: 26109670 DOI: 10.1523/jneurosci.0049-15.2015] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
Understanding the spatiotemporal dynamics of brain activity is crucial for inferring the underlying synaptic and nonsynaptic mechanisms of brain dysfunction. Focal seizures with secondary generalization are traditionally considered to begin in a limited spatial region and spread to connected areas, which can include both pathological and normal brain tissue. The mechanisms underlying this spread are important to our understanding of seizures and to improve therapies for surgical intervention. Here we study the properties of seizure recruitment-how electrical brain activity transitions to large voltage fluctuations characteristic of spike-and-wave seizures. We do so using invasive subdural electrode arrays from a population of 16 patients with pharmacoresistant epilepsy. We find an average delay of ∼30 s for a broad area of cortex (8 × 8 cm) to be recruited into the seizure, at an estimated speed of ∼4 mm/s. The spatiotemporal characteristics of recruitment reveal two categories of patients: one in which seizure recruitment of neighboring cortical regions follows a spatially organized pattern consistent from seizure to seizure, and a second group without consistent spatial organization of activity during recruitment. The consistent, organized recruitment correlates with a more regular, compared with small-world, connectivity pattern in simulation and successful surgical treatment of epilepsy. We propose that an improved understanding of how the seizure recruits brain regions into large amplitude voltage fluctuations provides novel information to improve surgical treatment of epilepsy and highlights the slow spread of massive local activity across a vast extent of cortex during seizure.
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An Integrated Index for the Identification of Focal Electroencephalogram Signals Using Discrete Wavelet Transform and Entropy Measures. ENTROPY 2015. [DOI: 10.3390/e17085218] [Citation(s) in RCA: 78] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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Application of Entropy Measures on Intrinsic Mode Functions for the Automated Identification of Focal Electroencephalogram Signals. ENTROPY 2015. [DOI: 10.3390/e17020669] [Citation(s) in RCA: 234] [Impact Index Per Article: 23.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
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Vega-Zelaya L, Pastor JE, de Sola RG, Ortega GJ. Inhomogeneous cortical synchronization and partial epileptic seizures. Front Neurol 2014; 5:187. [PMID: 25309507 PMCID: PMC4173324 DOI: 10.3389/fneur.2014.00187] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2014] [Accepted: 09/10/2014] [Indexed: 11/24/2022] Open
Abstract
Objective: Interictal synchronization clusters have recently been described in several publications using diverse techniques, including neurophysiological recordings and fMRI, in patients suffering from epilepsy. However, little is known about the role of these hyper-synchronous areas during seizures. In this work, we report an analysis of synchronization clusters jointly with several network measures during seizure activity; we then discuss our findings in the context of prior literature. Methods: Subdural activity was recorded by electrocorticography (with 60 electrodes placed at temporal and parietal lobe locations) in a patient with temporal lobe epilepsy with partial seizures with and without secondary generalization (SG). Both interictal and ictal activities (during four seizures) were investigated and characterized using local synchronization and complex network methodology. The modularity, density of links, average clustering coefficient, and average path lengths were calculated to obtain information about the dynamics of the global network. Functional connectivity changes during the seizures were compared with the time evolution of highly synchronized areas. Results: Our findings reveal temporal changes in local synchronization areas during seizures and a tight relationship between the cortical locations of these areas and the patterns of their evolution over time. Seizure evolution and SG appear to be driven by two different underlying mechanisms.
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Affiliation(s)
- Lorena Vega-Zelaya
- Clinical Neurophysiology Service, Hospital Universitario la Princesa , Madrid , Spain
| | - Jesús Eduardo Pastor
- Clinical Neurophysiology Service, Hospital Universitario la Princesa , Madrid , Spain ; Fundacion de Investigación Biomédica Hospital de la Princesa , Madrid , Spain
| | - Rafael G de Sola
- Fundacion de Investigación Biomédica Hospital de la Princesa , Madrid , Spain ; Neurosurgery Service, Hospital Universitario la Princesa , Madrid , Spain
| | - Guillermo J Ortega
- Fundacion de Investigación Biomédica Hospital de la Princesa , Madrid , Spain ; Neurosurgery Service, Hospital Universitario la Princesa , Madrid , Spain
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Wu T, Ge S, Zhang R, Liu H, Chen Q, Zhao R, Yin Y, Lv X, Jiang T. Neuromagnetic coherence of epileptic activity: an MEG study. Seizure 2014; 23:417-23. [PMID: 24552697 DOI: 10.1016/j.seizure.2014.01.022] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2013] [Revised: 01/21/2014] [Accepted: 01/22/2014] [Indexed: 10/25/2022] Open
Abstract
PURPOSE This study was undertaken to test the hypothesis that patients with epilepsy have abnormal imaginary coherence compared with control subjects. METHODS Thirty patients with seizures underwent magnetoencephalography (MEG) recording using a whole cortex MEG system. Conventional equivalent current dipoles (ECDs) and synthetic aperture magnetometry (SAM) were used to analyze MEG data. Neural synchronization was studied using imaginary coherence to analyze resting-state MEG data. The ECDs, SAM, and MEG results were then compared with intra/extra-operative EEG. RESULTS Abnormal imaginary coherence was identified in all patients (30/30, 100%). The locations of abnormal imaginary coherence were in agreement with the ECDs locations of spikes in 23 patients (23/30, 76.7%). The ECD locations in 5 patients were scattered or located bilaterally. The locations of abnormal imaginary coherence were in agreement with SAM locations in 26 patients (26/30, 86.7%). One case of imaginary coherence was located in two lobes. The ECDs fit locations were in agreement with SAM locations in 21 patients (21/30, 70.0%). The locations of abnormal imaginary coherence, ECDs, and SAM were in agreement with intra/extra-operative EEG in 23 patients (23/30, 76.7%), 17 patients (17/30, 56.7%), and 20 patients (20/30, 66.7%), respectively. The results of ECDs location, SAM location, imaginary coherence, and intracranial EEG (iEEG) were consistent in 15 patients (15/30, 50%). CONCLUSIONS The results show that patients with epilepsy have abnormal imaginary coherence, and suggest that the location and coherence of epileptic activity could be quantitatively identified and analyzed using neuromagnetic signals.
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Affiliation(s)
- Ting Wu
- Key Laboratory for NeuroInformation of the Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China; Department of Magnetoencephalography, Nanjing Brain Hospital, Affiliated to Nanjing Medical University, Nanjing 210029, China.
| | - Sheng Ge
- Key Laboratory of Child Development and Learning Science, Ministry of Education, Southeast University, Nanjing 210096, China
| | - Rui Zhang
- Department of Magnetoencephalography, Nanjing Brain Hospital, Affiliated to Nanjing Medical University, Nanjing 210029, China
| | - Hongyi Liu
- Department of Magnetoencephalography, Nanjing Brain Hospital, Affiliated to Nanjing Medical University, Nanjing 210029, China
| | - Qiqi Chen
- Department of Magnetoencephalography, Nanjing Brain Hospital, Affiliated to Nanjing Medical University, Nanjing 210029, China
| | - Ruirui Zhao
- Key Laboratory for NeuroInformation of the Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China
| | - Yan Yin
- Key Laboratory for NeuroInformation of the Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China
| | - Xiuxiu Lv
- Key Laboratory for NeuroInformation of the Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China
| | - Tianzi Jiang
- Key Laboratory for NeuroInformation of the Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China
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Staba RJ, Worrell GA. What is the importance of abnormal "background" activity in seizure generation? ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2014; 813:43-54. [PMID: 25012365 DOI: 10.1007/978-94-017-8914-1_3] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
Abstract
Investigations of interictal epileptiform spikes and seizures have played a central role in the study of epilepsy. The background EEG activity, however, has received less attention. In this chapter we discuss the characteristic features of the background activity of the brain when individuals are at rest and awake (resting wake) and during sleep. The characteristic rhythms of the background EEG are presented, and the presence of 1/f (β) behavior of the EEG power spectral density is discussed and its possible origin and functional significance. The interictal EEG findings of focal epilepsy and the impact of interictal epileptiform spikes on cognition are also discussed.
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Affiliation(s)
- Richard J Staba
- Department of Neurology, Reed Neurological Research Center, David Geffen School of Medicine at UCLA, 710 Westwood Plaza, RNRC 2-155, Los Angeles, CA, 90095, USA,
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Boutros NN, Gjini K, Moran J, Chugani H, Bowyer S. Panic versus epilepsy: a challenging differential diagnosis. Clin EEG Neurosci 2013; 44:313-8. [PMID: 23585641 DOI: 10.1177/1550059413478163] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The differential diagnosis of panic attacks (PAs) from temporal lobe epilepsy is important and challenging. Despite advances in understanding the neural basis of psychiatric disorders, current practice strongly emphasizes dichotomous thinking of either "functional" PAs of psychiatric etiology or a seizure disorder. We present a case with PA features strongly suggestive of a seizure disorder. An extensive workup failed to resolve the dichotomy between functional and neurological. The possibility is raised that there may be degrees of abnormal hyperexcitability, leading to the emergence of symptoms, but not enough to generate large potentials that can be detected at the scalp.
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Affiliation(s)
- Nash N Boutros
- Department of Psychiatry and Behavioral Neurosciences, Wayne State University, Detroit, School of Medicine, Detroit, MI, USA
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27
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Constable RT, Scheinost D, Finn ES, Shen X, Hampson M, Winstanley FS, Spencer DD, Papademetris X. Potential use and challenges of functional connectivity mapping in intractable epilepsy. Front Neurol 2013; 4:39. [PMID: 23734143 PMCID: PMC3660665 DOI: 10.3389/fneur.2013.00039] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2013] [Accepted: 04/11/2013] [Indexed: 12/31/2022] Open
Abstract
This review focuses on the use of resting-state functional magnetic resonance imaging data to assess functional connectivity in the human brain and its application in intractable epilepsy. This approach has the potential to predict outcomes for a given surgical procedure based on the pre-surgical functional organization of the brain. Functional connectivity can also identify cortical regions that are organized differently in epilepsy patients either as a direct function of the disease or through indirect compensatory responses. Functional connectivity mapping may help identify epileptogenic tissue, whether this is a single focal location or a network of seizure-generating tissues. This review covers the basics of connectivity analysis and discusses particular issues associated with analyzing such data. These issues include how to define nodes, as well as differences between connectivity analyses of individual nodes, groups of nodes, and whole-brain assessment at the voxel level. The need for arbitrary thresholds in some connectivity analyses is discussed and a solution to this problem is reviewed. Overall, functional connectivity analysis is becoming an important tool for assessing functional brain organization in epilepsy.
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Affiliation(s)
- Robert Todd Constable
- Department of Diagnostic Radiology, Yale School of Medicine New Haven, CT, USA ; Department of Neurosurgery, Yale School of Medicine New Haven, CT, USA ; Department of Biomedical Engineering, Yale University New Haven, CT, USA ; Interdepartmental Neuroscience Program, Yale University New Haven, CT, USA
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Fingelkurts AA, Fingelkurts AA. Operational Architectonics Methodology for EEG Analysis: Theory and Results. MODERN ELECTROENCEPHALOGRAPHIC ASSESSMENT TECHNIQUES 2013. [DOI: 10.1007/7657_2013_60] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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29
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Lepage KQ, Gregoriou GG, Kramer MA, Aoi M, Gotts SJ, Eden UT, Desimone R. A procedure for testing across-condition rhythmic spike-field association change. J Neurosci Methods 2012; 213:43-62. [PMID: 23164959 DOI: 10.1016/j.jneumeth.2012.10.010] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2012] [Revised: 10/19/2012] [Accepted: 10/19/2012] [Indexed: 10/27/2022]
Abstract
Many experiments in neuroscience have compared the strength of association between neural spike trains and rhythms present in local field potential (LFP) recordings. The measure employed in these comparisons, "spike-field coherence", is a frequency dependent measure of linear association, and is shown to depend on overall neural activity (Lepage et al., 2011). Dependence upon overall neural activity, that is, dependence upon the total number of spikes, renders comparison of spike-field coherence across experimental context difficult. In this paper, an inferential procedure based upon a generalized linear model is shown to be capable of separating the effects of overall neural activity from spike train-LFP oscillatory coupling. This separation provides a means to compare the strength of oscillatory association between spike train-LFP pairs independent of differences in spike counts. Following a review of the generalized linear modelling framework of point process neural activity a specific class of generalized linear models are introduced. This model class, using either a piece-wise constant link function, or an exponential function to relate an LFP rhythm to neural response, is used to develop hypothesis tests capable of detecting changes in spike train-LFP oscillatory coupling. The performance of these tests is validated, both in simulation and on real data. The proposed method of inference provides a principled statistical procedure by which across-context change in spike train-LFP rhythmic association can be directly inferred that explicitly handles between-condition differences in total spike count.
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Affiliation(s)
- Kyle Q Lepage
- Boston University, Department of Mathematics & Statistics, Boston, MA, USA.
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30
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Palmigiano A, Pastor J, García de Sola R, Ortega GJ. Stability of synchronization clusters and seizurability in temporal lobe epilepsy. PLoS One 2012; 7:e41799. [PMID: 22844524 PMCID: PMC3402406 DOI: 10.1371/journal.pone.0041799] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2012] [Accepted: 06/25/2012] [Indexed: 01/03/2023] Open
Abstract
PURPOSE Identification of critical areas in presurgical evaluations of patients with temporal lobe epilepsy is the most important step prior to resection. According to the "epileptic focus model", localization of seizure onset zones is the main task to be accomplished. Nevertheless, a significant minority of epileptic patients continue to experience seizures after surgery (even when the focus is correctly located), an observation that is difficult to explain under this approach. However, if attention is shifted from a specific cortical location toward the network properties themselves, then the epileptic network model does allow us to explain unsuccessful surgical outcomes. METHODS The intraoperative electrocorticography records of 20 patients with temporal lobe epilepsy were analyzed in search of interictal synchronization clusters. Synchronization was analyzed, and the stability of highly synchronized areas was quantified. Surrogate data were constructed and used to statistically validate the results. Our results show the existence of highly localized and stable synchronization areas in both the lateral and the mesial areas of the temporal lobe ipsilateral to the clinical seizures. Synchronization areas seem to play a central role in the capacity of the epileptic network to generate clinical seizures. Resection of stable synchronization areas is associated with elimination of seizures; nonresection of synchronization clusters is associated with the persistence of seizures after surgery. DISCUSSION We suggest that synchronization clusters and their stability play a central role in the epileptic network, favoring seizure onset and propagation. We further speculate that the stability distribution of these synchronization areas would differentiate normal from pathologic cases.
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Affiliation(s)
| | - Jesús Pastor
- Instituto de Investigación Sanitaria Hospital de la Princesa, Madrid, Spain
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31
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Greenblatt RE, Pflieger ME, Ossadtchi AE. Connectivity measures applied to human brain electrophysiological data. J Neurosci Methods 2012; 207:1-16. [PMID: 22426415 PMCID: PMC5549799 DOI: 10.1016/j.jneumeth.2012.02.025] [Citation(s) in RCA: 82] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2011] [Revised: 02/08/2012] [Accepted: 02/28/2012] [Indexed: 11/22/2022]
Abstract
Connectivity measures are (typically bivariate) statistical measures that may be used to estimate interactions between brain regions from electrophysiological data. We review both formal and informal descriptions of a range of such measures, suitable for the analysis of human brain electrophysiological data, principally electro- and magnetoencephalography. Methods are described in the space-time, space-frequency, and space-time-frequency domains. Signal processing and information theoretic measures are considered, and linear and nonlinear methods are distinguished. A novel set of cross-time-frequency measures is introduced, including a cross-time-frequency phase synchronization measure.
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32
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Nam CS, Woo J, Bahn S. Severe motor disability affects functional cortical integration in the context of brain-computer interface (BCI) use. ERGONOMICS 2012; 55:581-591. [PMID: 22435802 DOI: 10.1080/00140139.2011.647095] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
UNLABELLED The purpose of this study was to investigate cortical interaction between brain regions in people with and without severe motor disability during brain-computer interface (BCI) operation through coherence analysis. Eighteen subjects, including six patients with cerebral palsy (CP) and three patients with amyotrophic lateral sclerosis (ALS), participated. The results showed (1) the existence of BCI performance difference caused by severe motor disability; (2) different coherence patterns between participants with and without severe motor disability during BCI operation and (3) effects of motor disability on cortical connections varying in the brain regions for the different frequency bands, indicating reduced cortical differentiation and specialisation. Participants with severe neuromuscular impairments, as compared with the able-bodied group, recruited more cortical regions to compensate for the difficulties caused by their motor disability, reflecting a less efficient operating strategy for the BCI task. This study demonstrated that coherence analysis can be applied to examine the ways cortical networks cooperate with each other during BCI tasks. PRACTITIONER SUMMARY Few studies have investigated the electrophysiological underpinnings of differences in BCI performance. This study contributes by assessing neuronal synchrony among brain regions. Our findings revealed that severe motor disability causes more cortical areas to be recruited to perform the BCI task, indicating reduced cortical differentiation and specialisation.
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Affiliation(s)
- Chang S Nam
- Edward P. Fitts Department of Industrial and Systems Engineering, North Carolina State University, Raleigh, NC 27695, USA.
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33
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Rana P, Lipor J, Lee H, van Drongelen W, Kohrman MH, Van Veen B. Seizure detection using the phase-slope index and multichannel ECoG. IEEE Trans Biomed Eng 2012; 59:1125-34. [PMID: 22271828 DOI: 10.1109/tbme.2012.2184796] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Detection and analysis of epileptic seizures is of clinical and research interest. We propose a novel seizure detection and analysis scheme based on the phase-slope index (PSI) of directed influence applied to multichannel electrocorticogram data. The PSI metric identifies increases in the spatio-temporal interactions between channels that clearly distinguish seizure from interictal activity. We form a global metric of interaction between channels and compare this metric to a threshold to detect the presence of seizures. The threshold is chosen based on a moving average of recent activity to accommodate differences between patients and slow changes within each patient over time. We evaluate detection performance over a challenging population of five patients with different types of epilepsy using a total of 47 seizures in nearly 258 h of recorded data. Using a common threshold procedure, we show that our approach detects all of the seizures in four of the five patients with a false detection rate less than two per hour. A variation on the global metric is proposed to identify which channels are strong drivers of activity in each patient. These metrics are computationally efficient and suitable for real-time application.
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Affiliation(s)
- Puneet Rana
- Department of Electrical and Computer Engineering, University of Wisconsin-Madison, Madison, WI 53715, USA.
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Abstract
The brain is naturally considered as a network of interacting elements which, when functioning properly, produces an enormous range of dynamic, adaptable behavior. However, when elements of this network fail, pathological changes ensue, including epilepsy, one of the most common brain disorders. This review examines some aspects of cortical network organization that distinguish epileptic cortex from normal brain as well as the dynamics of network activity before and during seizures, focusing primarily on focal seizures. The review is organized around four phases of the seizure: the interictal period, onset, propagation, and termination. For each phase, the authors discuss the most common rhythmic characteristics of macroscopic brain voltage activity and outline the observed functional network features. Although the characteristics of functional networks that support the epileptic seizure remain an area of active research, the prevailing trends point to a complex set of network dynamics between, before, and during seizures.
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Affiliation(s)
- Mark A Kramer
- Department of Mathematics and Statistics, Boston University, Boston, MA 02215, USA.
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35
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Abstract
Over the past two decades, the increased ability to analyze network relationships among neural structures has provided novel insights into brain function. Most network approaches, however, focus on static representations of the brain's physical or statistical connectivity. Few studies have examined how brain functional networks evolve spontaneously over long epochs of continuous time. To address this, we examine functional connectivity networks deduced from continuous long-term electrocorticogram recordings. For a population of six human patients, we identify a persistent pattern of connections that form a frequency-band-dependent network template, and a set of core connections that appear frequently and together. These structures are robust, emerging from brief time intervals (~100 s) regardless of cognitive state. These results suggest that a metastable, frequency-band-dependent scaffold of brain connectivity exists from which transient activity emerges and recedes.
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36
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Lepage KQ, Kramer MA, Eden UT. The dependence of spike field coherence on expected intensity. Neural Comput 2011; 23:2209-41. [PMID: 21671792 DOI: 10.1162/neco_a_00169] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
The coherence between neural spike trains and local-field potential recordings, called spike-field coherence, is of key importance in many neuroscience studies. In this work, aside from questions of estimator performance, we demonstrate that theoretical spike-field coherence for a broad class of spiking models depends on the expected rate of spiking. This rate dependence confounds the phase locking of spike events to field-potential oscillations with overall neuron activity and is demonstrated analytically, for a large class of stochastic models, and in simulation. Finally, the relationship between the spike-field coherence and the intensity field coherence is detailed analytically. This latter quantity is independent of neuron firing rate and, under commonly found conditions, is proportional to the probability that a neuron spikes at a specific phase of field oscillation. Hence, intensity field coherence is a rate-independent measure and a candidate on which to base the appropriate statistical inference of spike field synchrony.
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Affiliation(s)
- Kyle Q Lepage
- Department of Mathematics and Statistics, Boston University, Boston, MA 15213, USA.
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Elisevich K, Shukla N, Moran JE, Smith B, Schultz L, Mason K, Barkley GL, Tepley N, Gumenyuk V, Bowyer SM. An assessment of MEG coherence imaging in the study of temporal lobe epilepsy. Epilepsia 2011; 52:1110-9. [PMID: 21366556 PMCID: PMC3116050 DOI: 10.1111/j.1528-1167.2011.02990.x] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
PURPOSE This study examines whether magnetoencephalographic (MEG) coherence imaging is more sensitive than the standard single equivalent dipole (ECD) model in lateralizing the site of epileptogenicity in patients with drug-resistant temporal lobe epilepsy (TLE). METHODS An archival review of ECD MEG analyses of 30 presurgical patients with TLE was undertaken with data extracted subsequently for coherence analysis by a blinded reviewer for comparison of accuracy of lateralization. Postoperative outcome was assessed by Engel classification. MEG coherence images were generated from 10 min of spontaneous brain activity and compared to surgically resected brain areas outlined on each subject's magnetic resonance image (MRI). Coherence values were averaged independently for each hemisphere to ascertain the laterality of the epileptic network. Reliability between runs was established by calculating the correlation between epochs. Match rates compared the results of each of the two MEG analyses with optimal postoperative outcome. KEY FINDINGS The ECD method provided an overall match rate of 50% (13/16 cases) for Engel class I outcomes, with 37% (11/30 cases) found to be indeterminate (i.e., no spikes identified on MEG). Coherence analysis provided an overall match rate of 77% (20/26 cases). Of 19 cases without evidence of mesial temporal sclerosis, coherence analysis correctly lateralized the side of TLE in 11 cases (58%). Sensitivity of the ECD method was 41% (indeterminate cases included) and that of the coherence method 73%, with a positive predictive value of 70% for an Engel class Ia outcome. Intrasubject coherence imaging reliability was consistent from run-to-run (correlation > 0.90) using three 10-min epochs. SIGNIFICANCE MEG coherence analysis has greater sensitivity than the ECD method for lateralizing TLE and demonstrates reliable stability from run-to-run. It, therefore, improves upon the capability of MEG in providing further information of use in clinical decision-making where the laterality of TLE is questioned.
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Affiliation(s)
- Kost Elisevich
- Department of Neurosurgery, Henry Ford Health System, Detroit, Michigan, USA
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38
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Menendez de la Prida L, Trevelyan AJ. Cellular mechanisms of high frequency oscillations in epilepsy: on the diverse sources of pathological activities. Epilepsy Res 2011; 97:308-17. [PMID: 21482073 DOI: 10.1016/j.eplepsyres.2011.02.009] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2011] [Accepted: 02/20/2011] [Indexed: 11/19/2022]
Abstract
A major goal in epilepsy research is to understand the cellular basis of pathological forms of network oscillations, particularly those classified as high-frequency activity. What are the underlying mechanisms, and how do they arise? The topic of this review is the pattern of high-frequency oscillations that have been recorded in epileptic tissue, and how they might differ from physiological activity. We discuss recent experimental and clinical data with a major focus on the diverse sources of extracellular signals and the contribution of different neuronal populations, including GABAergic interneurons and glutamatergic principal cells.
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Gazit T, Doron I, Sagher O, Kohrman MH, Towle VL, Teicher M, Ben-Jacob E. Time-frequency characterization of electrocorticographic recordings of epileptic patients using frequency-entropy similarity: a comparison to other bi-variate measures. J Neurosci Methods 2010; 194:358-73. [PMID: 20969891 DOI: 10.1016/j.jneumeth.2010.10.011] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2010] [Revised: 09/05/2010] [Accepted: 10/13/2010] [Indexed: 11/28/2022]
Abstract
Expert evaluation of electrocorticographic (ECoG) recordings forms the linchpin of seizure onset zone localization in the evaluation of epileptic patients for surgical resection. Numerous methods have been developed to analyze these complex recordings, including uni-variate (characterizing single channels), bi-variate (comparing channel pairs) and multivariate measures. Developing reliable algorithms may be helpful in clinical tasks such as localization of epileptogenic zones and seizure anticipation, as well as enabling better understanding of neuronal function and dynamics. Recently we have developed the frequency-entropy (F-E) similarity measure, and have tested its capability in mapping the epileptogenic zones. The F-E similarity measure compares time-frequency characterizations of two recordings. In this study, we examine the method's principles and utility and compare it to previously described bi-variate correspondence measures such as correlation, coherence, mean phase coherence and spectral comparison methods. Specially designed synthetic signals were used for illuminating theoretical differences between the measures. Intracranial recordings of four epileptic patients were then used for the measures' comparative analysis by creating a mean inter-electrode matrix for each of the correspondence measures and comparing the structure of these matrices during the inter-ictal and ictal periods. We found that the F-E similarity measure is able to discover spectral and temporal features in data which are hidden for the other measures and are important for foci localization.
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Affiliation(s)
- T Gazit
- The Leslie and Suzan Gonda (Goldschmied) Multidisciplinary Brain Research Center, Bar Ilan University, Ramat Gan 52900, Israel
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Warren CP, Hu S, Stead M, Brinkmann BH, Bower MR, Worrell GA. Synchrony in normal and focal epileptic brain: the seizure onset zone is functionally disconnected. J Neurophysiol 2010; 104:3530-9. [PMID: 20926610 DOI: 10.1152/jn.00368.2010] [Citation(s) in RCA: 137] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Synchronization of local and distributed neuronal assemblies is thought to underlie fundamental brain processes such as perception, learning, and cognition. In neurological disease, neuronal synchrony can be altered and in epilepsy may play an important role in the generation of seizures. Linear cross-correlation and mean phase coherence of local field potentials (LFPs) are commonly used measures of neuronal synchrony and have been studied extensively in epileptic brain. Multiple studies have reported that epileptic brain is characterized by increased neuronal synchrony except possibly prior to seizure onset when synchrony may decrease. Previous studies using intracranial electroencephalography (EEG), however, have been limited to patients with epilepsy. Here we investigate neuronal synchrony in epileptic and control brain using intracranial EEG recordings from patients with medically resistant partial epilepsy and control subjects with intractable facial pain. For both epilepsy and control patients, average LFP synchrony decreases with increasing interelectrode distance. Results in epilepsy patients show lower LFP synchrony between seizure-generating brain and other brain regions. This relative isolation of seizure-generating brain underlies the paradoxical finding that control patients without epilepsy have greater average LFP synchrony than patients with epilepsy. In conclusion, we show that in patients with focal epilepsy, the region of epileptic brain generating seizures is functionally isolated from surrounding brain regions. We further speculate that this functional isolation may contribute to spontaneous seizure generation and may represent a clinically useful electrophysiological signature for mapping epileptic brain.
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Affiliation(s)
- Christopher P Warren
- Mayo Systems Electrophysiology Laboratory, Department of Neurology, Division of Epilepsy and Electroencephalography, Mayo Clinic, Rochester, Minnesota 55905, USA
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Abstract
Epileptic seizures reflect a pathological brain state characterized by specific clinical and electrical manifestations. The proposed mechanisms are heterogeneous but united by the supposition that epileptic activity is hypersynchronous across multiple scales, yet principled and quantitative analyses of seizure dynamics across space and throughout the entire ictal period are rare. To more completely explore spatiotemporal interactions during seizures, we examined electrocorticogram data from a population of male and female human patients with epilepsy and from these data constructed dynamic network representations using statistically robust measures. We found that these networks evolved through a distinct topological progression during the seizure. Surprisingly, the overall synchronization changed only weakly, whereas the topology changed dramatically in organization. A large subnetwork dominated the network architecture at seizure onset and preceding termination but, between, fractured into smaller groups. Common network characteristics appeared consistently for a population of subjects, and, for each subject, similar networks appeared from seizure to seizure. These results suggest that, at the macroscopic spatial scale, epilepsy is not so much a manifestation of hypersynchrony but instead of network reorganization.
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Inferring spatiotemporal network patterns from intracranial EEG data. Clin Neurophysiol 2010; 121:823-35. [PMID: 20434948 DOI: 10.1016/j.clinph.2009.12.036] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2009] [Revised: 12/01/2009] [Accepted: 12/31/2009] [Indexed: 11/20/2022]
Abstract
OBJECTIVE The characterization of spatial network dynamics is desirable for a better understanding of seizure physiology. The goal of this work is to develop a computational method for identifying transient spatial patterns from intracranial electroencephalographic (iEEG) data. METHODS Starting with bivariate synchrony measures, such as phase correlation, a two-step clustering procedure is used to identify statistically significant spatial network patterns, whose temporal evolution can be inferred. We refer to this as the composite synchrony profile (CSP) method. RESULTS The CSP method was verified with simulated data and evaluated using ictal and interictal recordings from three patients with intractable epilepsy. Application of the CSP method to these clinical iEEG datasets revealed a set of distinct CSPs with topographies consistent with medial temporal/limbic and superior parietal/medial frontal networks thought to be involved in the seizure generation process. CONCLUSIONS By combining relatively straightforward multivariate signal processing techniques, such as phase synchrony, with clustering and statistical hypothesis testing, the methods we describe may prove useful for network definition and identification. SIGNIFICANCE The network patterns we observe using the CSP method cannot be inferred from direct visual inspection of the raw time series data, nor are they apparent in voltage-based topographic map sequences.
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Dauwels J, Eskandar E, Cash S. Localization of seizure onset area from intracranial non-seizure EEG by exploiting locally enhanced synchrony. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2010; 2009:2180-3. [PMID: 19963540 DOI: 10.1109/iembs.2009.5332447] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
For as many as 30% of epilepsy patients, seizures are poorly controlled with medication alone. For some of these patients surgery may be an option: the brain region responsible for seizure onset may be removed surgically. However, this requires accurate delineation of the seizure onset region. Currently, the key to making this determination is seizure EEG. Therefore, EEG recordings must continue until enough seizures are obtained to determine the onset region; this may take about 5 days to several weeks. In some cases these recordings must be done using invasive electrodes, a procedure that includes substantial risk, discomfort and cost. In this paper, techniques are developed that use periods of intracranial non-seizure ("rest") EEG to localize epileptogenic networks. Analysis of intracranial EEG (recorded by surface and/or depth electrodes) of 6 epileptic patients shows that certain EEG channels and hence cortical regions are consistently more synchronous ("hypersynchronous") compared to others. It is shown that hypersynchrony seems to strongly correlate with the seizure onset zone; this phenomenon may in the long term allow to determine the seizure onset area(s) from non-seizure EEG, which in turn would enable shorter hospitalizations or even avoidance of semi-chronic implantations all-together.
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Affiliation(s)
- Justin Dauwels
- Laboratory for Information and Decision Systems (LIDS), Massachusetts Institute of Technology, Cambridge, MA, USA.
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Silfverhuth MJ, Kortelainen J, Sonkajärvi E, Suominen K, Alahuhta S, Jäntti V, Seppänen T. Coherence in depth electrodes during induction of deep anesthesia. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2010; 2010:5963-5966. [PMID: 21096949 DOI: 10.1109/iembs.2010.5627573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Our aim was to explore time-varying coherence values versus spacing and referencing of electrode contacts in thalamic level from human encephalographic (EEG) data. Data has been acquired during induction of propofol anesthesia until burst-suppression level in scalp EEG. Results are shown from coherence analysis applied to EEG signals from selected depth electrode contacts pair-wise of three subjects. Alpha coherence is the most prominent behavior in all channel pairs. It is persistent throughout the time period followed and in coherence calculated between bipolar derivations in depth electrodes.
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Affiliation(s)
- Minna J Silfverhuth
- Department of Electrical and Information Engineering, BOX 4500, FIN-90014 University of Oulu, Finland.
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Wilke C, van Drongelen W, Kohrman M, He B. Neocortical seizure foci localization by means of a directed transfer function method. Epilepsia 2009; 51:564-72. [PMID: 19817817 DOI: 10.1111/j.1528-1167.2009.02329.x] [Citation(s) in RCA: 95] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
PURPOSE Determination of the origin of extratemporal neocortical onset seizures is often challenging due to the rapid speed at which they propagate throughout the cortex. Typically, these patients are poor surgical candidates and many times experience recurrences of seizure activity following resection of the assumed seizure focus. METHODS We applied a causal measurement technique--the directed transfer function (DTF)--in an effort to determine the cortical location responsible for the propagation of the seizure activity. Intracranial seizure recordings were obtained from a group of 11 pediatric patients with medically intractable neocortical-onset epilepsy. Time windows were selected from the recordings following onset of the ictal activity. The DTF was applied to the selected time windows, and the frequency-specific statistically significant source activity arising from each cortical recording site was quantified. The DTF-estimated source activity was then compared with the seizure-onset zone(s) identified by the epileptologists. RESULTS In an analysis of the 11 pediatric patients, the DTF was shown to identify estimated ictal sources that were highly correlated with the clinically identified foci. In addition, it was observed that in the patients with multiple ictal foci, the topography of the casual source activity from the analyzed seizures was associated with the separate clinically identified seizure-onset zones. DISCUSSION Although localization of neocortical-onset seizures is typically challenging, the causal measures employed in this study-namely the directed transfer function-identified generators of the ictal activity that were highly correlated with the cortical regions identified as the seizure-onset zones by the epileptologists. This technique could prove useful in the identification of seizure-specific propagation pathways in the presurgical evaluation of patients with epilepsy.
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Affiliation(s)
- Christopher Wilke
- Department of Biomedical Engineering, University of Minnesota, 312 Church Street, Minneapolis, MN 55455, USA
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Kramer MA, Eden UT, Cash SS, Kolaczyk ED. Network inference with confidence from multivariate time series. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2009; 79:061916. [PMID: 19658533 DOI: 10.1103/physreve.79.061916] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2009] [Revised: 05/14/2009] [Indexed: 05/22/2023]
Abstract
Networks--collections of interacting elements or nodes--abound in the natural and manmade worlds. For many networks, complex spatiotemporal dynamics stem from patterns of physical interactions unknown to us. To infer these interactions, it is common to include edges between those nodes whose time series exhibit sufficient functional connectivity, typically defined as a measure of coupling exceeding a predetermined threshold. However, when uncertainty exists in the original network measurements, uncertainty in the inferred network is likely, and hence a statistical propagation of error is needed. In this manuscript, we describe a principled and systematic procedure for the inference of functional connectivity networks from multivariate time series data. Our procedure yields as output both the inferred network and a quantification of uncertainty of the most fundamental interest: uncertainty in the number of edges. To illustrate this approach, we apply a measure of linear coupling to simulated data and electrocorticogram data recorded from a human subject during an epileptic seizure. We demonstrate that the procedure is accurate and robust in both the determination of edges and the reporting of uncertainty associated with that determination.
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Affiliation(s)
- Mark A Kramer
- Department of Mathematics and Statistics, Boston University, Boston, Massachusetts 02215, USA.
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Chaovalitwongse WA, Suharitdamrong W, Liu CC, Anderson ML. Brain Network Analysis of Seizure Evolution. ANN ZOOL FENN 2008. [DOI: 10.5735/086.045.0504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Sun X, Perc M, Lu Q, Kurths J. Spatial coherence resonance on diffusive and small-world networks of Hodgkin-Huxley neurons. CHAOS (WOODBURY, N.Y.) 2008; 18:023102. [PMID: 18601469 DOI: 10.1063/1.2900402] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Spatial coherence resonance in a spatially extended system that is locally modeled by Hodgkin-Huxley (HH) neurons is studied in this paper. We focus on the ability of additive temporally and spatially uncorrelated Gaussian noise to extract a particular spatial frequency of excitatory waves in the medium, whereby examining the impact of diffusive and small-world network topology that determines the interactions amongst coupled HH neurons. We show that there exists an intermediate noise intensity that is able to extract a characteristic spatial frequency of the system in a resonant manner provided the latter is diffusively coupled, thus indicating the existence of spatial coherence resonance. However, as the diffusive topology of the medium is relaxed via the introduction of shortcut links introducing small-world properties amongst coupled HH neurons, the ability of additive Gaussian noise to evoke ordered excitatory waves deteriorates rather spectacularly, leading to the decoherence of the spatial dynamics and with it related absence of spatial coherence resonance. In particular, already a minute fraction of shortcut links suffices to substantially disrupt coherent pattern formation in the examined system.
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Affiliation(s)
- Xiaojuan Sun
- School of Science, Beihang University, Beijing 100083, China.
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Ortega GJ, Menendez de la Prida L, Sola RG, Pastor J. Synchronization Clusters of Interictal Activity in the Lateral Temporal Cortex of Epileptic Patients: Intraoperative Electrocorticographic Analysis. Epilepsia 2008; 49:269-80. [PMID: 17825075 DOI: 10.1111/j.1528-1167.2007.01266.x] [Citation(s) in RCA: 84] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
OBJECTIVE Drug-resistant temporal lobe epilepsy (TLE) can be treated by tailored surgery guided by electrocorticography (ECoG). Although its value is still controversial, ECoG activity can provide continuous information on intracortical interactions that may be useful to understand the pathophysiology of TLE. The goal of this study is to characterize local interactions in multichannel ECoG recordings of the lateral cortex of TLE patients using three synchronization measures and to link this information with surgical outcome. METHODS Intraoperative ECoG recordings from 29 TLE patients were obtained using grids of 20 electrodes (4 x 5) covering regions T1, T2, and T3 of the lateral temporal lobe. Linear correlation, mutual information, and phase synchronization were calculated to quantify lateral intracortical interactions. Surrogate data files were generated to test results statistically. RESULTS By distributing locally the interactions between the electrodes, we characterized the spatial patterns of ECoG activity. We found clusters of synchronized activity at specific areas of the lateral temporal cortex in most patients. Methodologically, linear correlation and phase synchronization performed better than mutual information for cluster discrimination. ROC analysis suggested that surgical removal of sharply defined synchronization clusters correlated with seizure control. CONCLUSIONS Our results show that synchronous intraoperative ECoG activity emerges from specific cortical areas that are highly differentiated from the rest of the temporal cortex. This suggests that synchronization analysis could be used to functionally map into the temporal cortex of TLE patients. Moreover, our results suggest that these sites might be involved in the circuits that participate in clinical seizures.
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Ben-Jacob E, Boccaletti S, Pomyalov A, Procaccia I, Towle VL. Detecting and localizing the foci in human epileptic seizures. CHAOS (WOODBURY, N.Y.) 2007; 17:043113. [PMID: 18163777 DOI: 10.1063/1.2805658] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
We consider the electrical signals recorded from a subdural array of electrodes placed on the pial surface of the brain for chronic evaluation of epileptic patients before surgical resection. A simple and computationally fast method to analyze the interictal phase synchrony between such electrodes is introduced and developed with the aim of detecting and localizing the foci of the epileptic seizures. We evaluate the method by comparing the results of surgery to the localization predicted here. We find an indication of good correspondence between the success or failure in the surgery and the agreement between our identification and the regions actually operated on.
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Affiliation(s)
- Eshel Ben-Jacob
- School of Physics and Astronomy, Tel Aviv University, Tel Aviv 69978, Israel
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