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Aguzzi J, Flexas MM, Flögel S, Lo Iacono C, Tangherlini M, Costa C, Marini S, Bahamon N, Martini S, Fanelli E, Danovaro R, Stefanni S, Thomsen L, Riccobene G, Hildebrandt M, Masmitja I, Del Rio J, Clark EB, Branch A, Weiss P, Klesh AT, Schodlok MP. Exo-Ocean Exploration with Deep-Sea Sensor and Platform Technologies. ASTROBIOLOGY 2020; 20:897-915. [PMID: 32267735 DOI: 10.1089/ast.2019.2129] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
One of Saturn's largest moons, Enceladus, possesses a vast extraterrestrial ocean (i.e., exo-ocean) that is increasingly becoming the hotspot of future research initiatives dedicated to the exploration of putative life. Here, a new bio-exploration concept design for Enceladus' exo-ocean is proposed, focusing on the potential presence of organisms across a wide range of sizes (i.e., from uni- to multicellular and animal-like), according to state-of-the-art sensor and robotic platform technologies used in terrestrial deep-sea research. In particular, we focus on combined direct and indirect life-detection capabilities, based on optoacoustic imaging and passive acoustics, as well as molecular approaches. Such biologically oriented sampling can be accompanied by concomitant geochemical and oceanographic measurements to provide data relevant to exo-ocean exploration and understanding. Finally, we describe how this multidisciplinary monitoring approach is currently enabled in terrestrial oceans through cabled (fixed) observatories and their related mobile multiparametric platforms (i.e., Autonomous Underwater and Remotely Operated Vehicles, as well as crawlers, rovers, and biomimetic robots) and how their modified design can be used for exo-ocean exploration.
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Affiliation(s)
- J Aguzzi
- Instituto de Ciencias del Mar (ICM-CSIC), Barcelona, Spain
- Stazione Zoologica Anton Dohrn, Naples, Italy
| | - M M Flexas
- California Institute of Technology, Pasadena, California, USA
| | - S Flögel
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
| | - C Lo Iacono
- Instituto de Ciencias del Mar (ICM-CSIC), Barcelona, Spain
- National Oceanographic Center (NOC), University of Southampton, Southampton, United Kingdom
| | | | - C Costa
- Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA)-Centro di ricerca Ingegneria e Trasformazioni agroalimentari - Monterotondo, Rome, Italy
| | - S Marini
- Stazione Zoologica Anton Dohrn, Naples, Italy
- National Research Council of Italy (CNR), Institute of Marine Sciences, La Spezia, Italy
| | - N Bahamon
- Instituto de Ciencias del Mar (ICM-CSIC), Barcelona, Spain
- Centro de Estudios Avanzados de Blanes (CEAB-CSIC), Blanes, Spain
| | - S Martini
- Sorbonne Université, CNRS, Laboratoire d'Océanographie de Villefranche, Villefranche-sur-mer, France
| | - E Fanelli
- Stazione Zoologica Anton Dohrn, Naples, Italy
- Department of Life and Environmental Sciences, Polytechnic University of Marche, Ancona, Italy
| | - R Danovaro
- Stazione Zoologica Anton Dohrn, Naples, Italy
- Department of Life and Environmental Sciences, Polytechnic University of Marche, Ancona, Italy
| | - S Stefanni
- Stazione Zoologica Anton Dohrn, Naples, Italy
| | | | - G Riccobene
- Istituto Nazionale di Fisica Nucleare (INFN), Laboratori Nazionali del Sud, Catania, Italy
| | - M Hildebrandt
- German Research Center for Artificial Intelligence (DFKI), Bremen, Germany
| | - I Masmitja
- SARTI, Universitat Politècnica de Catalunya (UPC), Barcelona, Spain
| | - J Del Rio
- SARTI, Universitat Politècnica de Catalunya (UPC), Barcelona, Spain
| | - E B Clark
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
| | - A Branch
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
| | | | - A T Klesh
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
| | - M P Schodlok
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
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2
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Laurent H, Soper AK, Dougan L. Trimethylamine N-oxide (TMAO) resists the compression of water structure by magnesium perchlorate: terrestrial kosmotrope vs. Martian chaotrope. Phys Chem Chem Phys 2020; 22:4924-4937. [PMID: 32091074 DOI: 10.1039/c9cp06324b] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Neutron diffraction and computational modelling provide insight into water structure.
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Affiliation(s)
| | - Alan K. Soper
- ISIS Facility
- STFC Rutherford Appleton Laboratory
- Didcot
- UK
| | - Lorna Dougan
- Department of Physics and Astronomy
- University of Leeds
- Leeds
- UK
- Astbury Centre for Structural and Molecular Biology
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3
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Wadham JL, Hawkings JR, Tarasov L, Gregoire LJ, Spencer RGM, Gutjahr M, Ridgwell A, Kohfeld KE. Ice sheets matter for the global carbon cycle. Nat Commun 2019; 10:3567. [PMID: 31417076 PMCID: PMC6695407 DOI: 10.1038/s41467-019-11394-4] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2017] [Accepted: 07/09/2019] [Indexed: 11/09/2022] Open
Abstract
The cycling of carbon on Earth exerts a fundamental influence upon the greenhouse gas content of the atmosphere, and hence global climate over millennia. Until recently, ice sheets were viewed as inert components of this cycle and largely disregarded in global models. Research in the past decade has transformed this view, demonstrating the existence of uniquely adapted microbial communities, high rates of biogeochemical/physical weathering in ice sheets and storage and cycling of organic carbon (>104 Pg C) and nutrients. Here we assess the active role of ice sheets in the global carbon cycle and potential ramifications of enhanced melt and ice discharge in a warming world.
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Affiliation(s)
- J L Wadham
- University of Bristol, Bristol, BS8 1TH, UK.
| | - J R Hawkings
- National High Magnetic Field Lab and Earth, Ocean and Atmospheric Sciences, Florida State University, Tallahassee, FL, 32306, USA
- German Research Centre for Geosciences GFZ, 14473, Potsdam, Germany
| | - L Tarasov
- Memorial University, St. John's, NF, A1B 3X9, Canada
| | | | - R G M Spencer
- National High Magnetic Field Lab and Earth, Ocean and Atmospheric Sciences, Florida State University, Tallahassee, FL, 32306, USA
| | | | - A Ridgwell
- University of California, Riverside, CA, 94720, USA
| | - K E Kohfeld
- Simon Fraser University, Burnaby, BC, 8888, Canada
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4
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Malard LA, Šabacká M, Magiopoulos I, Mowlem M, Hodson A, Tranter M, Siegert MJ, Pearce DA. Spatial Variability of Antarctic Surface Snow Bacterial Communities. Front Microbiol 2019; 10:461. [PMID: 30972032 PMCID: PMC6443967 DOI: 10.3389/fmicb.2019.00461] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2018] [Accepted: 02/21/2019] [Indexed: 11/13/2022] Open
Abstract
It was once a long-held view that the Antarctic was a pristine environment with low biomass, low biodiversity and low rates of microbial activity. However, as the intensity of scientific investigation has increased, so these views have started to change. In particular, the role and impact of human activity toward indigenous microbial communities has started to come under more intense scrutiny. During the Subglacial Lake Ellsworth exploration campaign in December 2012, a microbiological survey was conducted to determine the extent and likelihood of exogenous input into the subglacial lake system during the hot-water drilling process. Snow was collected from the surface to represent that used for melt water production for hot-water drilling. The results of this study showed that snow used to provide melt water differed in its microbiological composition from that of the surrounding area and raised the question of how the biogeography of snow-borne microorganisms might influence the potential outcome of scientific analyses. In this study, we investigated the biogeography of microorganisms in snow around a series of Antarctic logistic hubs, where human activity was clearly apparent, and from which scientific investigations have been undertaken. A change in microbial community structure with geographical location was apparent and, notably, a decrease in alpha diversity at more remote southern latitudes. Soil-related microorganisms dominated microbial assemblages suggesting terrestrial input, most likely from long-range aeolian transport into continental Antarctica. We also observed that relic DNA was not a major issue when assessing snow samples. Overall, our observations might have profound implications for future scientific activities in Antarctica, such as the need to establish "no-go" protected areas, the need for better characterization of field sites and improved protocols for sterilization and verification of ice drilling equipment.
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Affiliation(s)
- Lucie A. Malard
- Department of Applied Sciences, Faculty of Health and Life Sciences, Northumbria University at Newcastle, Newcastle upon Tyne, United Kingdom
| | - Marie Šabacká
- Centre for Polar Ecology, University of South Bohemia in České Budějovice, České Budějovice, Czechia
| | - Iordanis Magiopoulos
- Institute of Oceanography, Hellenic Centre for Marine Research, Heraklion, Greece
- Ocean Technology and Engineering Group, National Oceanography Centre Southampton, Southampton, United Kingdom
| | - Matt Mowlem
- Ocean Technology and Engineering Group, National Oceanography Centre Southampton, Southampton, United Kingdom
| | - Andy Hodson
- Arctic Geology, University Centre in Svalbard, Longyearbyen, Norway
- Department of Environmental Sciences, Western Norway University of Applied Sciences, Bergen, Norway
| | - Martyn Tranter
- Bristol Glaciology Centre, University of Bristol, Bristol, United Kingdom
| | - Martin J. Siegert
- Grantham Institute, Department of Earth Science and Engineering, Imperial College London, London, United Kingdom
| | - David A. Pearce
- Department of Applied Sciences, Faculty of Health and Life Sciences, Northumbria University at Newcastle, Newcastle upon Tyne, United Kingdom
- British Antarctic Survey, Natural Environment Research Council, Cambridge, United Kingdom
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Yau S, Seth-Pasricha M. Viruses of Polar Aquatic Environments. Viruses 2019; 11:v11020189. [PMID: 30813316 PMCID: PMC6410135 DOI: 10.3390/v11020189] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2019] [Revised: 02/13/2019] [Accepted: 02/18/2019] [Indexed: 02/07/2023] Open
Abstract
The poles constitute 14% of the Earth’s biosphere: The aquatic Arctic surrounded by land in the north, and the frozen Antarctic continent surrounded by the Southern Ocean. In spite of an extremely cold climate in addition to varied topographies, the polar aquatic regions are teeming with microbial life. Even in sub-glacial regions, cellular life has adapted to these extreme environments where perhaps there are traces of early microbes on Earth. As grazing by macrofauna is limited in most of these polar regions, viruses are being recognized for their role as important agents of mortality, thereby influencing the biogeochemical cycling of nutrients that, in turn, impact community dynamics at seasonal and spatial scales. Here, we review the viral diversity in aquatic polar regions that has been discovered in the last decade, most of which has been revealed by advances in genomics-enabled technologies, and we reflect on the vast extent of the still-to-be explored polar microbial diversity and its “enigmatic virosphere”.
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Affiliation(s)
- Sheree Yau
- Integrative Marine Biology Laboratory (BIOM), CNRS, UMR7232, Sorbonne Université, 66650 Banyuls-sur-Mer, France.
| | - Mansha Seth-Pasricha
- Institute of Earth, Ocean, and Atmospheric Sciences, Rutgers University, New Brunswick, NJ 08901, USA.
- Department of Ecology, Evolution, and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USA.
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Garner D. Editorial. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2017; 375:rsta.2016.0384. [PMID: 27895263 PMCID: PMC5179938 DOI: 10.1098/rsta.2016.0384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Affiliation(s)
- Dave Garner
- The School of Chemistry, The University of Nottingham, University Park, Nottingham NG7 2RD, UK
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Pearce DA, Magiopoulos I, Mowlem M, Tranter M, Holt G, Woodward J, Siegert MJ. Microbiology: lessons from a first attempt at Lake Ellsworth. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2016; 374:rsta.2014.0291. [PMID: 26667906 DOI: 10.1098/rsta.2014.0291] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 10/26/2015] [Indexed: 06/05/2023]
Abstract
During the attempt to directly access, measure and sample Subglacial Lake Ellsworth in 2012-2013, we conducted microbiological analyses of the drilling equipment, scientific instrumentation, field camp and natural surroundings. From these studies, a number of lessons can be learned about the cleanliness of deep Antarctic subglacial lake access leading to, in particular, knowledge of the limitations of some of the most basic relevant microbiological principles. Here, we focus on five of the core challenges faced and describe how cleanliness and sterilization were implemented in the field. In the light of our field experiences, we consider how effective these actions were, and what can be learnt for future subglacial exploration missions. The five areas covered are: (i) field camp environment and activities, (ii) the engineering processes surrounding the hot water drilling, (iii) sample handling, including recovery, stability and preservation, (iv) clean access methodologies and removal of sample material, and (v) the biodiversity and distribution of bacteria around the Antarctic. Comparisons are made between the microbiology of the Lake Ellsworth field site and other Antarctic systems, including the lakes on Signy Island, and on the Antarctic Peninsula at Lake Hodgson. Ongoing research to better define and characterize the behaviour of natural and introduced microbial populations in response to deep-ice drilling is also discussed. We recommend that future access programmes: (i) assess each specific local environment in enhanced detail due to the potential for local contamination, (ii) consider the sterility of the access in more detail, specifically focusing on single cell colonization and the introduction of new species through contamination of pre-existing microbial communities, (iii) consider experimental bias in methodological approaches, (iv) undertake in situ biodiversity detection to mitigate risk of non-sample return and post-sample contamination, and (v) address the critical question of how important these microbes are in the functioning of Antarctic ecosystems.
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Affiliation(s)
- D A Pearce
- Department of Applied Sciences, Faculty of Health and Life Sciences, University of Northumbria, Ellison Building, Newcastle upon Tyne NE1 8ST, UK British Antarctic Survey, High Cross, Madingley Road, Cambridge CB3 0ET, UK Department of Arctic Biology, University Centre in Svalbard, Longyearbyen 9171, Norway
| | - I Magiopoulos
- National Oceanography Centre, University of Southampton Waterfront Campus, European Way, Southampton SO14 3ZH, UK
| | - M Mowlem
- National Oceanography Centre, University of Southampton Waterfront Campus, European Way, Southampton SO14 3ZH, UK
| | - M Tranter
- Centre for Glaciology, University of Bristol, 12 Berkeley Square, University Road, Clifton, Bristol BS8 1SS, UK
| | - G Holt
- Department of Applied Sciences, Faculty of Health and Life Sciences, University of Northumbria, Ellison Building, Newcastle upon Tyne NE1 8ST, UK
| | - J Woodward
- Department of Applied Sciences, Faculty of Health and Life Sciences, University of Northumbria, Ellison Building, Newcastle upon Tyne NE1 8ST, UK
| | - M J Siegert
- Grantham Institute and Department of Earth Science and Engineering, Imperial College London, South Kensington, London SW7 2AZ, UK
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Bulat SA. Microbiology of the subglacial Lake Vostok: first results of borehole-frozen lake water analysis and prospects for searching for lake inhabitants. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2016; 374:rsta.2014.0292. [PMID: 26667905 DOI: 10.1098/rsta.2014.0292] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 09/02/2015] [Indexed: 06/05/2023]
Abstract
This article examines the question of the possible existence of microbial life inhabiting the subglacial Lake Vostok buried beneath a 4 km thick Antarctic ice sheet. It represents the results of analysis of the only available frozen lake water samples obtained upon the first lake entry and subsequent re-coring the water frozen within the borehole. For comparison, results obtained by earlier molecular microbiological studies of accretion ice are included in this study, with the focus on thermophiles and an unknown bacterial phylotype. A description of two Lake Vostok penetrations is presented for the first time from the point of view of possible clean water sampling. Finally, the results of current studies of Lake Vostok frozen water samples are presented, with the focus on the discovery of another unknown bacterial phylotype w123-10 distantly related to the above-mentioned unknown phylotype AF532061 detected in Vostok accretion ice, both successfully passing all possible controls for contamination. The use of clean-room facilities and the establishment of a contaminant library are considered to be prerequisites for research on microorganisms from Lake Vostok. It seems that not yet recorded microbial life could exist within the Lake Vostok water body. In conclusion, the prospects for searching for lake inhabitants are expressed with the intention to sample the lake water as cleanly as possible in order to make sure that further results will be robust.
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Affiliation(s)
- Sergey A Bulat
- Division of Molecular and Radiation Biophysics, B.P. Konstantinov Petersburg Nuclear Physics Institute, National Research Centre 'Kurchatov Institute', 188300 Gatchina, Russia Department of Physical Methods and Devices for Quality Control, Institute of Physics and Technology, Ural Federal University, 620002 Ekaterinburg, Russia
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Young DA, Schroeder DM, Blankenship DD, Kempf SD, Quartini E. The distribution of basal water between Antarctic subglacial lakes from radar sounding. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2016; 374:rsta.2014.0297. [PMID: 26667910 DOI: 10.1098/rsta.2014.0297] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 10/13/2015] [Indexed: 06/05/2023]
Abstract
Antarctica's subglacial lakes have two end member geophysical expressions: as hydraulically flat, radar reflective regions highlighted in ice surface topography and radar sounding profiles ('definite lakes'), and as localized sites of elevation change identified from repeat elevation observations ('active lakes') that are often found in fast flowing ice streams or enhanced ice flow tributaries. While 'definite lakes' can be identified readily by high bed reflectivity in radar sounding, the identification and characterization of less distinct subglacial lakes and water systems with radar sounding are complicated by variable radio-wave attenuation in the overlying ice. When relying on repeat elevation observations, the relatively short times series and biased distribution of elevation observations, along with the episodic nature of 'active lake' outflow and replenishment, limit our understanding of how water flows under the ice sheet. Using recently developed methods for quantifying the radar scattering behaviour of the basal interface of the ice, we can avoid the problem of attenuation, and observe the plumbing of the subglacial landscape. In West Antarctica's Ross Sea Embayment, we confirm that extensive distributed water systems underlie these ice streams. Distributed water sheets are upstream in the onset regions of fast flow, while canal systems underly downstream regions of fast flow. In East Antarctica, we use specularity analysis to recover substantial hydraulic connectivity extending beyond previous knowledge, connecting the lakes already delineated by traditional radar sounding or surface elevation transients.
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Affiliation(s)
- D A Young
- Institute for Geophysics, University of Texas at Austin, Austin, TX, USA
| | - D M Schroeder
- Institute for Geophysics, University of Texas at Austin, Austin, TX, USA
| | - D D Blankenship
- Institute for Geophysics, University of Texas at Austin, Austin, TX, USA
| | - Scott D Kempf
- Institute for Geophysics, University of Texas at Austin, Austin, TX, USA
| | - E Quartini
- Institute for Geophysics, University of Texas at Austin, Austin, TX, USA
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Siegert MJ, Ross N, Le Brocq AM. Recent advances in understanding Antarctic subglacial lakes and hydrology. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2016; 374:rsta.2014.0306. [PMID: 26667914 PMCID: PMC4685968 DOI: 10.1098/rsta.2014.0306] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 08/03/2015] [Indexed: 06/05/2023]
Abstract
It is now well documented that over 400 subglacial lakes exist across the bed of the Antarctic Ice Sheet. They comprise a variety of sizes and volumes (from the approx. 250 km long Lake Vostok to bodies of water less than 1 km in length), relate to a number of discrete topographic settings (from those contained within valleys to lakes that reside in broad flat terrain) and exhibit a range of dynamic behaviours (from 'active' lakes that periodically outburst some or all of their water to those isolated hydrologically for millions of years). Here we critique recent advances in our understanding of subglacial lakes, in particular since the last inventory in 2012. We show that within 3 years our knowledge of the hydrological processes at the ice-sheet base has advanced considerably. We describe evidence for further 'active' subglacial lakes, based on satellite observation of ice-surface changes, and discuss why detection of many 'active' lakes is not resolved in traditional radio-echo sounding methods. We go on to review evidence for large-scale subglacial water flow in Antarctica, including the discovery of ancient channels developed by former hydrological processes. We end by predicting areas where future discoveries may be possible, including the detection, measurement and significance of groundwater (i.e. water held beneath the ice-bed interface).
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Affiliation(s)
- Martin J Siegert
- Grantham Institute and Department of Earth Science and Engineering, Imperial College London, South Kensington, London SW7 2AZ, UK
| | - Neil Ross
- Grantham Institute and Department of Earth Science and Engineering, Imperial College London, South Kensington, London SW7 2AZ, UK
| | - Anne M Le Brocq
- Grantham Institute and Department of Earth Science and Engineering, Imperial College London, South Kensington, London SW7 2AZ, UK
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