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Ivanov PC, Bartsch RP. Future of Sleep Medicine: Novel Approaches and Measures Derived from Physiologic Systems Dynamics (Part I). Sleep Med Clin 2025; 20:135-148. [PMID: 39894594 DOI: 10.1016/j.jsmc.2024.10.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2025]
Abstract
We review recent progress in understanding fundamental aspects of physiologic regulation during wake and sleep based on modern data-driven, analytical, and computational approaches with a focus on the complex dynamics of individual physiologic systems. The presented empirical findings indicate that sleep-wake and circadian cycles do not simply modulate basic physiologic functions but influence physiologic systems dynamics simultaneously over a broad range of time scales. The reviewed empirical approaches and derived measures represent novel mechanistic aspects of sleep and wake regulation, and lay the foundation for a new class of diagnostic and prognostic biomarkers in clinical sleep medicine.
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Affiliation(s)
- Plamen Ch Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, MA 02215, USA; Institute of Solid State Physics, Bulgarian Academy of Sciences, Sofia 1784, Bulgaria.
| | - Ronny P Bartsch
- Department of Physics, Bar-Ilan University, Ramat Gan 5290002, Israel
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2
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Huo C, Lombardi F, Blanco-Centurion C, Shiromani PJ, Ivanov PC. Role of the Locus Coeruleus Arousal Promoting Neurons in Maintaining Brain Criticality across the Sleep-Wake Cycle. J Neurosci 2024; 44:e1939232024. [PMID: 38951035 PMCID: PMC11358608 DOI: 10.1523/jneurosci.1939-23.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2023] [Revised: 06/17/2024] [Accepted: 06/20/2024] [Indexed: 07/03/2024] Open
Abstract
Sleep control depends on a delicate interplay among brain regions. This generates a complex temporal architecture with numerous sleep-stage transitions and intermittent fluctuations to micro-states and brief arousals. These temporal dynamics exhibit hallmarks of criticality, suggesting that tuning to criticality is essential for spontaneous sleep-stage and arousal transitions. However, how the brain maintains criticality remains not understood. Here, we investigate θ- and δ-burst dynamics during the sleep-wake cycle of rats (Sprague-Dawley, adult male) with lesion in the wake-promoting locus coeruleus (LC). We show that, in control rats, θ- and δ-bursts exhibit power-law (θ-bursts, active phase) and exponential-like (δ-bursts, quiescent phase) duration distributions, as well as power-law long-range temporal correlations (LRTCs)-typical of non-equilibrium systems self-organizing at criticality. Furthermore, consecutive θ- and δ-bursts durations are characterized by anti-correlated coupling, indicating a new class of self-organized criticality that emerges from underlying feedback between neuronal populations and brain areas involved in generating arousals and sleep states. In contrast, we uncover that LC lesion leads to alteration of θ- and δ-burst critical features, with change in duration distributions and correlation properties, and increase in θ-δ coupling. Notably, these LC-lesion effects are opposite to those observed for lesions in the sleep-promoting ventrolateral preoptic (VLPO) nucleus. Our findings indicate that critical dynamics of θ- and δ-bursts arise from a balanced interplay of LC and VLPO, which maintains brain tuning to criticality across the sleep-wake cycle-a non-equilibrium behavior in sleep micro-architecture at short timescales that coexists with large-scale sleep-wake homeostasis.
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Affiliation(s)
- Chengyu Huo
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215
- School of Electronic Information Engineering, Changshu Institute of Technology, Changshu, Jiangsu 215500, China
| | - Fabrizio Lombardi
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215
- Department of Biomedical Sciences, University of Padova, Padova 35131, Italy
| | - Carlos Blanco-Centurion
- Departments of Psychiatry and Behavioral Sciences, Medical University of South Carolina, Charleston, South Carolina 29425
| | - Priyattam J Shiromani
- Departments of Psychiatry and Behavioral Sciences, Medical University of South Carolina, Charleston, South Carolina 29425
- Ralph H. Johnson Veterans Healthcare System Charleston, Charleston, South Carolina 29401
| | - Plamen Ch Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215
- Harvard Medical School and Division of Sleep Medicine, Brigham and Women Hospital, Boston, Massachusetts 02115
- Institute of Solid State Physics, Bulgarian Academy of Sciences, Sofia 1784, Bulgaria
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3
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de Bragança RH, de Moraes LMT, Romaguera ARDC, Aguiar JA, Croitoru MD. Impact of Correlated Disorder on Surface Superconductivity: Revealing the Robustness of the Surface Ordering Effect. J Phys Chem Lett 2024; 15:2573-2579. [PMID: 38417042 DOI: 10.1021/acs.jpclett.3c03448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/01/2024]
Abstract
Surface superconductivity, wherein electron pairing occurs at material surfaces or interfaces, has attracted a remarkable amount of attention since its discovery. Recent theoretical predictions have unveiled increased critical temperatures, especially at the surfaces of certain compounds and/or structures. The notion of "surface ordering" has been advanced to elucidate this phenomenon. Employing the framework of self-consistent Bogoliubov-de Gennes equations and a model incorporating correlated disorder, our study demonstrates the persistence of the surface ordering effect in the presence of weak to moderate bulk disorder. Intriguingly, our findings indicate that under moderate disorder conditions the surface critical temperature can be further increased, depending on the intensity and correlation of the disorder.
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Affiliation(s)
- R H de Bragança
- Departamento de Física, Centro de Ciências Exatas e da Natureza, Universidade Federal de Pernambuco, Recife, Pernambuco 50740-560, Brazil
| | - L M T de Moraes
- Departamento de Física, Centro de Ciências Exatas e da Natureza, Universidade Federal de Pernambuco, Recife, Pernambuco 50740-560, Brazil
| | - A R de C Romaguera
- Departamento de Física, Universidade Federal Rural de Pernambuco, Recife, Pernambuco 52171-900, Brazil
| | - J Albino Aguiar
- Departamento de Física, Centro de Ciências Exatas e da Natureza, Universidade Federal de Pernambuco, Recife, Pernambuco 50740-560, Brazil
| | - M D Croitoru
- Departamento de Física, Centro de Ciências Exatas e da Natureza, Universidade Federal de Pernambuco, Recife, Pernambuco 50740-560, Brazil
- HSE University, 101000 Moscow, Russian Federation
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4
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Neverov VD, Lukyanov AE, Krasavin AV, Vagov A, Lvov BG, Croitoru MD. Exploring disorder correlations in superconducting systems: spectroscopic insights and matrix element effects. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2024; 15:199-206. [PMID: 38379929 PMCID: PMC10877080 DOI: 10.3762/bjnano.15.19] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Accepted: 01/25/2024] [Indexed: 02/22/2024]
Abstract
Understanding the intricate interplay between disorder and superconductivity has become a key area of research in condensed matter physics, with profound implications for materials science. Recent studies have shown that spatial correlations of disorder potential can improve superconductivity, prompting a re-evaluation of some theoretical models. This paper explores the influence of disorder correlations on the fundamental properties of superconducting systems, going beyond the traditional assumption of spatially uncorrelated disorder. In particular, we investigate the influence of disorder correlations on key spectroscopic superconductor properties, including the density of states, as well as on the matrix elements of the superconducting coupling constant and their impact on the localization length. Our findings offer valuable insights into the role of disorder correlations in shaping the behavior of superconducting materials.
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Affiliation(s)
- Vyacheslav D Neverov
- National Research Nuclear University MEPhI, Moscow 115409, Russian Federation
- National Research University Higher School of Economics, 101000 Moscow, Russian Federation
| | - Alexander E Lukyanov
- National Research Nuclear University MEPhI, Moscow 115409, Russian Federation
- National Research University Higher School of Economics, 101000 Moscow, Russian Federation
| | - Andrey V Krasavin
- National Research Nuclear University MEPhI, Moscow 115409, Russian Federation
- National Research University Higher School of Economics, 101000 Moscow, Russian Federation
| | - Alexei Vagov
- National Research University Higher School of Economics, 101000 Moscow, Russian Federation
| | - Boris G Lvov
- National Research University Higher School of Economics, 101000 Moscow, Russian Federation
| | - Mihail D Croitoru
- National Research University Higher School of Economics, 101000 Moscow, Russian Federation
- Departamento de Física, Centro de Ciências Exatas e da Natureza,Universidade Federal de Pernambuco, Recife, Pernambuco, 50740-560, Brasil
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5
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Abstract
The outputs of many real-world complex dynamical systems are time series characterized by power-law correlations and fractal properties. The first proposed model for such time series comprised fractional Gaussian noise (fGn), defined by an autocorrelation function C(k) with asymptotic power-law behavior, and a complicated power spectrum S(f) with power-law behavior in the small frequency region linked to the power-law behavior of C(k). This connection suggested the use of simpler models for power-law correlated time series: time series with power spectra of the form S(f)∼1/fβ, i.e., with power-law behavior in the entire frequency range and not only near f=0 as fGn. This type of time series, known as 1/fβ noises or simply 1/f noises, can be simulated using the Fourier filtering method and has become a standard model for power-law correlated time series with a wide range of applications. However, despite the simplicity of the power spectrum of 1/fβ noises and of the known relationship between the power-law exponents of S(f) and C(k), to our knowledge, an explicit expression of C(k) for 1/fβ noises has not been previously published. In this work, we provide an analytical derivation of C(k) for 1/fβ noises, and we show the validity of our results by comparing them with the numerical results obtained from synthetically generated 1/fβ time series. We also present two applications of our results: First, we compare the autocorrelation functions of fGn and 1/fβ noises that, despite exhibiting similar power-law behavior, present some clear differences for anticorrelated cases. Secondly, we obtain the exact analytical expression of the Fluctuation Analysis algorithm when applied to 1/fβ noises.
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Carpena P, Gómez-Extremera M, Bernaola-Galván PA. On the Validity of Detrended Fluctuation Analysis at Short Scales. ENTROPY (BASEL, SWITZERLAND) 2021; 24:61. [PMID: 35052087 PMCID: PMC8775092 DOI: 10.3390/e24010061] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/03/2021] [Revised: 12/24/2021] [Accepted: 12/26/2021] [Indexed: 12/25/2022]
Abstract
Detrended Fluctuation Analysis (DFA) has become a standard method to quantify the correlations and scaling properties of real-world complex time series. For a given scale ℓ of observation, DFA provides the function F(ℓ), which quantifies the fluctuations of the time series around the local trend, which is substracted (detrended). If the time series exhibits scaling properties, then F(ℓ)∼ℓα asymptotically, and the scaling exponent α is typically estimated as the slope of a linear fitting in the logF(ℓ) vs. log(ℓ) plot. In this way, α measures the strength of the correlations and characterizes the underlying dynamical system. However, in many cases, and especially in a physiological time series, the scaling behavior is different at short and long scales, resulting in logF(ℓ) vs. log(ℓ) plots with two different slopes, α1 at short scales and α2 at large scales of observation. These two exponents are usually associated with the existence of different mechanisms that work at distinct time scales acting on the underlying dynamical system. Here, however, and since the power-law behavior of F(ℓ) is asymptotic, we question the use of α1 to characterize the correlations at short scales. To this end, we show first that, even for artificial time series with perfect scaling, i.e., with a single exponent α valid for all scales, DFA provides an α1 value that systematically overestimates the true exponent α. In addition, second, when artificial time series with two different scaling exponents at short and large scales are considered, the α1 value provided by DFA not only can severely underestimate or overestimate the true short-scale exponent, but also depends on the value of the large scale exponent. This behavior should prevent the use of α1 to describe the scaling properties at short scales: if DFA is used in two time series with the same scaling behavior at short scales but very different scaling properties at large scales, very different values of α1 will be obtained, although the short scale properties are identical. These artifacts may lead to wrong interpretations when analyzing real-world time series: on the one hand, for time series with truly perfect scaling, the spurious value of α1 could lead to wrongly thinking that there exists some specific mechanism acting only at short time scales in the dynamical system. On the other hand, for time series with true different scaling at short and large scales, the incorrect α1 value would not characterize properly the short scale behavior of the dynamical system.
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Affiliation(s)
- Pedro Carpena
- Departamento de Física Aplicada II, E.T.S.I. de Telecomunicación, Universidad de Málaga, 29071 Malaga, Spain; (M.G.-E.); (P.A.B.-G.)
- Instituto Carlos I de Física Teórica y Computacional, Universidad de Málaga, 29071 Malaga, Spain
| | - Manuel Gómez-Extremera
- Departamento de Física Aplicada II, E.T.S.I. de Telecomunicación, Universidad de Málaga, 29071 Malaga, Spain; (M.G.-E.); (P.A.B.-G.)
| | - Pedro A. Bernaola-Galván
- Departamento de Física Aplicada II, E.T.S.I. de Telecomunicación, Universidad de Málaga, 29071 Malaga, Spain; (M.G.-E.); (P.A.B.-G.)
- Instituto Carlos I de Física Teórica y Computacional, Universidad de Málaga, 29071 Malaga, Spain
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7
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Lombardi F, Shriki O, Herrmann HJ, de Arcangelis L. Long-range temporal correlations in the broadband resting state activity of the human brain revealed by neuronal avalanches. Neurocomputing 2021. [DOI: 10.1016/j.neucom.2020.05.126] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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8
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Vardhini P, Punitha N, Ramakrishnan S. Differentiation of fluctuations in uterine contractions associated with Term pregnancies using adaptive fractal features of electromyography signals. Med Eng Phys 2021; 88:78-85. [PMID: 33485517 DOI: 10.1016/j.medengphy.2020.12.010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Revised: 10/23/2020] [Accepted: 12/17/2020] [Indexed: 11/16/2022]
Abstract
Analysis of uterine contractions using electromyography signals is gaining importance due to its capability to measure the dynamics of uterus. Uterine electromyography (uEMG) provides information on the nature of uterine contractions non-invasively. In this study, the fluctuations in uEMG signals associated with Term pregnancies are analyzed. For this, Term uEMG signals corresponding to second (T1) and third (T2) trimesters are considered. The signals are subjected to Adaptive Fractal Analysis (AFA), wherein a global trend is obtained by using overlapping windows of three orders namely, 25%, 50% and 75%. The signals are detrended and the fluctuation function is estimated. Two Hurst exponent features computed at short range (Hs) and long range (Hl) are extracted and statistically analyzed. Results show that AFA is able to characterize variations in the fluctuations of Term delivery signals. The feature values are observed to vary significantly during different weeks of gestation. It is found that features of T2 signals are higher than that of T1 signals for all the considered overlaps, indicating that T2 signals possess smoother characteristics than T1 signals. Further, coefficient of variation is observed to be low, indicating that these features are able to handle the inter-subject variations in Term signals. Therefore, it appears that the proposed approach could aid in investigation of progressive changes in uterine contractions during Term pregnancies.
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Affiliation(s)
- P Vardhini
- Non-Invasive Imaging and Diagnostics Laboratory, Biomedical Engineering Group, Department of Applied Mechanics, Indian Institute of Technology Madras, Chennai, 600036, India.
| | - N Punitha
- Non-Invasive Imaging and Diagnostics Laboratory, Biomedical Engineering Group, Department of Applied Mechanics, Indian Institute of Technology Madras, Chennai, 600036, India
| | - S Ramakrishnan
- Non-Invasive Imaging and Diagnostics Laboratory, Biomedical Engineering Group, Department of Applied Mechanics, Indian Institute of Technology Madras, Chennai, 600036, India
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9
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Li Q, Gao J, Zhang Z, Huang Q, Wu Y, Xu B. Distinguishing Epileptiform Discharges From Normal Electroencephalograms Using Adaptive Fractal and Network Analysis: A Clinical Perspective. Front Physiol 2020; 11:828. [PMID: 32903770 PMCID: PMC7438848 DOI: 10.3389/fphys.2020.00828] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Accepted: 06/22/2020] [Indexed: 01/03/2023] Open
Abstract
Epilepsy is one of the most common disorders of the brain. Clinically, to corroborate an epileptic seizure-like symptom and to find the seizure localization, electroencephalogram (EEG) data are often visually examined by a clinical doctor to detect the presence of epileptiform discharges. Epileptiform discharges are transient waveforms lasting for several tens to hundreds of milliseconds and are mainly divided into seven types. It is important to develop systematic approaches to accurately distinguish these waveforms from normal control ones. This is a difficult task if one wishes to develop first principle rather than black-box based approaches, since clinically used scalp EEGs usually contain a lot of noise and artifacts. To solve this problem, we analyzed 640 multi-channel EEG segments, each 4s long. Among these segments, 540 are short epileptiform discharges, and 100 are from healthy controls. We have proposed two approaches for distinguishing epileptiform discharges from normal EEGs. The first method is based on Signal Range and EEGs' long range correlation properties characterized by the Hurst parameter H extracted by applying adaptive fractal analysis (AFA), which can also maximally suppress the effects of noise and various kinds of artifacts. Our second method is based on networks constructed from three aspects of the scalp EEG signals, the Signal Range, the energy of the alpha wave component, and EEG's long range correlation properties. The networks are further analyzed using singular value decomposition (SVD). The square of the first singular value from SVD is used to construct features to distinguish epileptiform discharges from normal controls. Using Random Forest Classifier (RF), our approaches can achieve very high accuracy in distinguishing epileptiform discharges from normal control ones, and thus are very promising to be used clinically. The network-based approach is also used to infer the localizations of each type of epileptiform discharges, and it is found that the sub-networks representing the most likely location of each type of epileptiform discharges are different among the seven types of epileptiform discharges.
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Affiliation(s)
- Qiong Li
- School of Computer, Electronics and Information, Guangxi University, Nanning, China
| | - Jianbo Gao
- Center for Geodata and Analysis, Faculty of Geographical Science, Beijing Normal University, Beijing, China
- Institute of Automation, Chinese Academy of Sciences, Beijing, China
- International College, Guangxi University, Nanning, Guangxi, China
| | - Ziwen Zhang
- School of Computer, Electronics and Information, Guangxi University, Nanning, China
| | - Qi Huang
- The First Affiliated Hospital of Guangxi Medical University, Nanning, China
| | - Yuan Wu
- The First Affiliated Hospital of Guangxi Medical University, Nanning, China
| | - Bo Xu
- Institute of Automation, Chinese Academy of Sciences, Beijing, China
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10
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Carpena P, Bernaola-Galván PA, Gómez-Extremera M, Coronado AV. Transforming Gaussian correlations. Applications to generating long-range power-law correlated time series with arbitrary distribution. CHAOS (WOODBURY, N.Y.) 2020; 30:083140. [PMID: 32872793 DOI: 10.1063/5.0013986] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2020] [Accepted: 08/06/2020] [Indexed: 06/11/2023]
Abstract
The observable outputs of many complex dynamical systems consist of time series exhibiting autocorrelation functions of great diversity of behaviors, including long-range power-law autocorrelation functions, as a signature of interactions operating at many temporal or spatial scales. Often, numerical algorithms able to generate correlated noises reproducing the properties of real time series are used to study and characterize such systems. Typically, many of those algorithms produce a Gaussian time series. However, the real, experimentally observed time series are often non-Gaussian and may follow distributions with a diversity of behaviors concerning the support, the symmetry, or the tail properties. It is always possible to transform a correlated Gaussian time series into a time series with a different marginal distribution, but the question is how this transformation affects the behavior of the autocorrelation function. Here, we study analytically and numerically how the Pearson's correlation of two Gaussian variables changes when the variables are transformed to follow a different destination distribution. Specifically, we consider bounded and unbounded distributions, symmetric and non-symmetric distributions, and distributions with different tail properties from decays faster than exponential to heavy-tail cases including power laws, and we find how these properties affect the correlation of the final variables. We extend these results to a Gaussian time series, which are transformed to have a different marginal distribution, and show how the autocorrelation function of the final non-Gaussian time series depends on the Gaussian correlations and on the final marginal distribution. As an application of our results, we propose how to generalize standard algorithms producing a Gaussian power-law correlated time series in order to create a synthetic time series with an arbitrary distribution and controlled power-law correlations. Finally, we show a practical example of this algorithm by generating time series mimicking the marginal distribution and the power-law tail of the autocorrelation function of real time series: the absolute returns of stock prices.
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Affiliation(s)
- Pedro Carpena
- Departamento de Física Aplicada II, E.T.S.I. de Telecomunicación, Universidad de Málaga, 29071 Málaga, Spain
| | - Pedro A Bernaola-Galván
- Departamento de Física Aplicada II, E.T.S.I. de Telecomunicación, Universidad de Málaga, 29071 Málaga, Spain
| | - Manuel Gómez-Extremera
- Departamento de Física Aplicada II, E.T.S.I. de Telecomunicación, Universidad de Málaga, 29071 Málaga, Spain
| | - Ana V Coronado
- Departamento de Física Aplicada II, E.T.S.I. de Telecomunicación, Universidad de Málaga, 29071 Málaga, Spain
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11
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Bogdan P, Eke A, Ivanov PC. Editorial: Fractal and Multifractal Facets in the Structure and Dynamics of Physiological Systems and Applications to Homeostatic Control, Disease Diagnosis and Integrated Cyber-Physical Platforms. Front Physiol 2020; 11:447. [PMID: 32477161 PMCID: PMC7239033 DOI: 10.3389/fphys.2020.00447] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Accepted: 04/09/2020] [Indexed: 11/21/2022] Open
Affiliation(s)
- Paul Bogdan
- Ming-Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, CA, United States
| | - András Eke
- Department of Physiology, School of Medicine, Semmelweis University, Budapest, Hungary.,Department of Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, CT, United States
| | - Plamen Ch Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, MA, United States.,Harvard Medical School and Division of Sleep Medicine, Brigham and Women's Hospital, Boston, MA, United States.,Institute of Solid State Physics, Bulgarian Academy of Sciences, Sofia, Bulgaria
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12
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Sikora G, Höll M, Gajda J, Kantz H, Chechkin A, Wyłomańska A. Probabilistic properties of detrended fluctuation analysis for Gaussian processes. Phys Rev E 2020; 101:032114. [PMID: 32289956 DOI: 10.1103/physreve.101.032114] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2019] [Accepted: 02/11/2020] [Indexed: 11/07/2022]
Abstract
Detrended fluctuation analysis (DFA) is one of the most widely used tools for the detection of long-range dependence in time series. Although DFA has found many interesting applications and has been shown to be one of the best performing detrending methods, its probabilistic foundations are still unclear. In this paper, we study probabilistic properties of DFA for Gaussian processes. Our main attention is paid to the distribution of the squared error sum of the detrended process. We use a probabilistic approach to derive general formulas for the expected value and the variance of the squared fluctuation function of DFA for Gaussian processes. We also get analytical results for the expected value of the squared fluctuation function for particular examples of Gaussian processes, such as Gaussian white noise, fractional Gaussian noise, ordinary Brownian motion, and fractional Brownian motion. Our analytical formulas are supported by numerical simulations. The results obtained can serve as a starting point for analyzing the statistical properties of DFA-based estimators for the fluctuation function and long-memory parameter.
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Affiliation(s)
- Grzegorz Sikora
- Faculty of Pure and Applied Mathematics, Hugo Steinhaus Center, Wroclaw University of Science and Technology, 50-370 Wroclaw, Poland
| | - Marc Höll
- Department of Physics, Institute of Nanotechnology and Advanced Materials, Bar-Ilan University, Ramat-Gan, 5290002 Israel
| | - Janusz Gajda
- Faculty of Economic Sciences, University of Warsaw, 00-241 Warsaw, Poland
| | - Holger Kantz
- Max Planck Institute for the Physics of Complex Systems, 01187 Dresden, Germany
| | - Aleksei Chechkin
- Institute of Physics & Astronomy, University of Potsdam, D-14476 Potsdam-Golm, Germany and Akhiezer Institute for Theoretical Physics NSC "Kharkov Institute of Physics and Technology", 61108 Kharkov, Ukraine
| | - Agnieszka Wyłomańska
- Faculty of Pure and Applied Mathematics, Hugo Steinhaus Center, Wroclaw University of Science and Technology, 50-370 Wroclaw, Poland
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13
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Lombardi F, Wang JWJL, Zhang X, Ivanov PC. Power-law correlations and coupling of active and quiet states underlie a class of complex systems with self-organization at criticality. EPJ WEB OF CONFERENCES 2020; 230. [PMID: 32655977 PMCID: PMC7351253 DOI: 10.1051/epjconf/202023000005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Physical and biological systems often exhibit intermittent dynamics with bursts or avalanches (active states) characterized by power-law size and duration distributions. These emergent features are typical of systems at the critical point of continuous phase transitions, and have led to the hypothesis that such systems may self-organize at criticality, i.e. without any fine tuning of parameters. Since the introduction of the Bak-Tang-Wiesenfeld (BTW) model, the paradigm of self-organized criticality (SOC) has been very fruitful for the analysis of emergent collective behaviors in a number of systems, including the brain. Although considerable effort has been devoted in identifying and modeling scaling features of burst and avalanche statistics, dynamical aspects related to the temporal organization of bursts remain often poorly understood or controversial. Of crucial importance to understand the mechanisms responsible for emergent behaviors is the relationship between active and quiet periods, and the nature of the correlations. Here we investigate the dynamics of active (θ-bursts) and quiet states (δ-bursts) in brain activity during the sleep-wake cycle. We show the duality of power-law (θ, active phase) and exponential-like (δ, quiescent phase) duration distributions, typical of SOC, jointly emerge with power-law temporal correlations and anti-correlated coupling between active and quiet states. Importantly, we demonstrate that such temporal organization shares important similarities with earthquake dynamics, and propose that specific power-law correlations and coupling between active and quiet states are distinctive characteristics of a class of systems with self-organization at criticality.
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Affiliation(s)
- Fabrizio Lombardi
- Institute of Science and Technology Austria, A-3400 Klosterneuburg, Austria.,Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, MA 02215, USA
| | - Jilin W J L Wang
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, MA 02215, USA
| | - Xiyun Zhang
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, MA 02215, USA
| | - Plamen Ch Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, MA 02215, USA.,Harvard Medical School and Division of Sleep Medicine, Brigham and Women Hospital, Boston, MA 02115, USA
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14
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Blesić SM, du Preez DJ, Stratimirović DI, Ajtić JV, Ramotsehoa MC, Allen MW, Wright CY. Characterization of personal solar ultraviolet radiation exposure using detrended fluctuation analysis. ENVIRONMENTAL RESEARCH 2020; 182:108976. [PMID: 31830694 DOI: 10.1016/j.envres.2019.108976] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 11/07/2019] [Accepted: 11/28/2019] [Indexed: 06/10/2023]
Abstract
Studies of personal solar ultraviolet radiation (pUVR) exposure are important to identify populations at-risk of excess and insufficient exposure given the negative and positive health impacts, respectively, of time spent in the sun. Electronic UVR dosimeters measure personal solar UVR exposure at high frequency intervals generating large datasets. Sophisticated methods are needed to analyze these data. Previously, wavelet transform (WT) analysis was applied to high-frequency personal recordings collected by electronic UVR dosimeters. Those findings showed scaling behavior in the datasets that changed from uncorrelated to long-range correlated with increasing duration of time spent in the sun. We hypothesized that the WT slope would be influenced by the duration of time that a person spends in continuum outside. In this study, we address this hypothesis by using an experimental study approach. We aimed to corroborate this hypothesis and to characterize the extent and nature of influence time a person spends outside has on the shape of statistical functions that we used to analyze individual UVR exposure patterns. Detrended fluctuation analysis (DFA) was applied to personal sun exposure data. We analyzed sun exposure recordings from skiers (on snow) and hikers in Europe, golfers in New Zealand and outdoor workers in South Africa. Results confirmed validity of the DFA superposition rule for assessment of pUVR data and showed that pUVR scaling is determined by personal patterns of exposure on lower scales. We also showed that this dominance ends at the range of time scales comparable to the maximal duration of continuous exposure to solar UVR during the day; in this way the superposition rule can be used to quantify behavioral patterns, particularly accurate if it is determined on WT curves. These findings confirm a novel way in which large datasets of personal UVR data may be analyzed to inform messaging regarding safe sun exposure for human health.
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Affiliation(s)
- Suzana M Blesić
- Institute for Medical Research, University fo Belgrade, Belgrade, Serbia; Department of Environmental Sciences, Informatics and Statistics, Ca'Foscari University fo Venice, Venice, Italy; Center for Participatory Science, Belgrade, Serbia.
| | - D Jean du Preez
- Department of Geography, Geoinformatics and Meteorology, University of Pretoria, Pretoria, South Africa.
| | | | - Jelena V Ajtić
- Faculty of Veterinary Medicine, University of Belgrade, Serbia.
| | - M Cynthia Ramotsehoa
- Occupational Hygiene and Health Research Initiative (OHHRI), Faculty of Health Sciences, North-West University, Potchefstroom, South Africa.
| | - Martin W Allen
- MacDiarmid Institute for Advanced Materials and Nanotechnology, University of Canterbury, New Zealand.
| | - Caradee Y Wright
- Department of Geography, Geoinformatics and Meteorology, University of Pretoria, Pretoria, South Africa; Environment and Health Research Unit, South African Medical Research Council, Pretoria, South Africa.
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15
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Complexity Changes in the US and China's Stock Markets: Differences, Causes, and Wider Social Implications. ENTROPY 2020; 22:e22010075. [PMID: 33285851 PMCID: PMC7516507 DOI: 10.3390/e22010075] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/01/2019] [Revised: 12/28/2019] [Accepted: 01/04/2020] [Indexed: 01/08/2023]
Abstract
How different are the emerging and the well-developed stock markets in terms of efficiency? To gain insights into this question, we compared an important emerging market, the Chinese stock market, and the largest and the most developed market, the US stock market. Specifically, we computed the Lempel–Ziv complexity (LZ) and the permutation entropy (PE) from two composite stock indices, the Shanghai stock exchange composite index (SSE) and the Dow Jones industrial average (DJIA), for both low-frequency (daily) and high-frequency (minute-to-minute)stock index data. We found that the US market is basically fully random and consistent with efficient market hypothesis (EMH), irrespective of whether low- or high-frequency stock index data are used. The Chinese market is also largely consistent with the EMH when low-frequency data are used. However, a completely different picture emerges when the high-frequency stock index data are used, irrespective of whether the LZ or PE is computed. In particular, the PE decreases substantially in two significant time windows, each encompassing a rapid market rise and then a few gigantic stock crashes. To gain further insights into the causes of the difference in the complexity changes in the two markets, we computed the Hurst parameter H from the high-frequency stock index data of the two markets and examined their temporal variations. We found that in stark contrast with the US market, whose H is always close to 1/2, which indicates fully random behavior, for the Chinese market, H deviates from 1/2 significantly for time scales up to about 10 min within a day, and varies systemically similar to the PE for time scales from about 10 min to a day. This opens the door for large-scale collective behavior to occur in the Chinese market, including herding behavior and large-scale manipulation as a result of inside information.
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16
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Meyer PG, Anvari M, Kantz H. Identifying characteristic time scales in power grid frequency fluctuations with DFA. CHAOS (WOODBURY, N.Y.) 2020; 30:013130. [PMID: 32013502 DOI: 10.1063/1.5123778] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2019] [Accepted: 12/23/2019] [Indexed: 06/10/2023]
Abstract
Frequency measurements indicate the state of a power grid. In fact, deviations from the nominal frequency determine whether the grid is stable or in a critical situation. We aim to understand the fluctuations of the frequency on multiple time scales with a recently proposed method based on detrended fluctuation analysis. It enables us to infer characteristic time scales and generate stochastic models. We capture and quantify known features of the fluctuations like periodicity due to the trading market, response to variations by control systems, and stability of the long time average. We discuss similarities and differences between the British grid and the continental European grid.
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Affiliation(s)
- Philipp G Meyer
- Max-Planck Institute for the Physics of Complex Systems (MPIPKS), 01187 Dresden, Germany
| | - Mehrnaz Anvari
- Max-Planck Institute for the Physics of Complex Systems (MPIPKS), 01187 Dresden, Germany
| | - Holger Kantz
- Max-Planck Institute for the Physics of Complex Systems (MPIPKS), 01187 Dresden, Germany
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17
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Jiang ZQ, Xie WJ, Zhou WX, Sornette D. Multifractal analysis of financial markets: a review. REPORTS ON PROGRESS IN PHYSICS. PHYSICAL SOCIETY (GREAT BRITAIN) 2019; 82:125901. [PMID: 31505468 DOI: 10.1088/1361-6633/ab42fb] [Citation(s) in RCA: 55] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Multifractality is ubiquitously observed in complex natural and socioeconomic systems. Multifractal analysis provides powerful tools to understand the complex nonlinear nature of time series in diverse fields. Inspired by its striking analogy with hydrodynamic turbulence, from which the idea of multifractality originated, multifractal analysis of financial markets has bloomed, forming one of the main directions of econophysics. We review the multifractal analysis methods and multifractal models adopted in or invented for financial time series and their subtle properties, which are applicable to time series in other disciplines. We survey the cumulating evidence for the presence of multifractality in financial time series in different markets and at different time periods and discuss the sources of multifractality. The usefulness of multifractal analysis in quantifying market inefficiency, in supporting risk management and in developing other applications is presented. We finally discuss open problems and further directions of multifractal analysis.
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Affiliation(s)
- Zhi-Qiang Jiang
- Research Center for Econophysics, East China University of Science and Technology, Shanghai 200237, People's Republic of China. Department of Finance, School of Business, East China University of Science and Technology, Shanghai 200237, People's Republic of China
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18
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Critical Dynamics and Coupling in Bursts of Cortical Rhythms Indicate Non-Homeostatic Mechanism for Sleep-Stage Transitions and Dual Role of VLPO Neurons in Both Sleep and Wake. J Neurosci 2019; 40:171-190. [PMID: 31694962 DOI: 10.1523/jneurosci.1278-19.2019] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2019] [Revised: 09/07/2019] [Accepted: 10/07/2019] [Indexed: 11/21/2022] Open
Abstract
Origin and functions of intermittent transitions among sleep stages, including brief awakenings and arousals, constitute a challenge to the current homeostatic framework for sleep regulation, focusing on factors modulating sleep over large time scales. Here we propose that the complex micro-architecture characterizing sleep on scales of seconds and minutes results from intrinsic non-equilibrium critical dynamics. We investigate θ- and δ-wave dynamics in control rats and in rats where the sleep-promoting ventrolateral preoptic nucleus (VLPO) is lesioned (male Sprague-Dawley rats). We demonstrate that bursts in θ and δ cortical rhythms exhibit complex temporal organization, with long-range correlations and robust duality of power-law (θ-bursts, active phase) and exponential-like (δ-bursts, quiescent phase) duration distributions, features typical of non-equilibrium systems self-organizing at criticality. We show that such non-equilibrium behavior relates to anti-correlated coupling between θ- and δ-bursts, persists across a range of time scales, and is independent of the dominant physiologic state; indications of a basic principle in sleep regulation. Further, we find that VLPO lesions lead to a modulation of cortical dynamics resulting in altered dynamical parameters of θ- and δ-bursts and significant reduction in θ-δ coupling. Our empirical findings and model simulations demonstrate that θ-δ coupling is essential for the emerging non-equilibrium critical dynamics observed across the sleep-wake cycle, and indicate that VLPO neurons may have dual role for both sleep and arousal/brief wake activation. The uncovered critical behavior in sleep- and wake-related cortical rhythms indicates a mechanism essential for the micro-architecture of spontaneous sleep-stage and arousal transitions within a novel, non-homeostatic paradigm of sleep regulation.SIGNIFICANCE STATEMENT We show that the complex micro-architecture of sleep-stage/arousal transitions arises from intrinsic non-equilibrium critical dynamics, connecting the temporal organization of dominant cortical rhythms with empirical observations across scales. We link such behavior to sleep-promoting neuronal population, and demonstrate that VLPO lesion (model of insomnia) alters dynamical features of θ and δ rhythms, and leads to significant reduction in θ-δ coupling. This indicates that VLPO neurons may have dual role for both sleep and arousal/brief wake control. The reported empirical findings and modeling simulations constitute first evidences of a neurophysiological fingerprint of self-organization and criticality in sleep- and wake-related cortical rhythms; a mechanism essential for spontaneous sleep-stage and arousal transitions that lays the bases for a novel, non-homeostatic paradigm of sleep regulation.
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Wang JWJL, Lombardi F, Zhang X, Anaclet C, Ivanov PC. Non-equilibrium critical dynamics of bursts in θ and δ rhythms as fundamental characteristic of sleep and wake micro-architecture. PLoS Comput Biol 2019; 15:e1007268. [PMID: 31725712 PMCID: PMC6855414 DOI: 10.1371/journal.pcbi.1007268] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2019] [Accepted: 07/11/2019] [Indexed: 01/08/2023] Open
Abstract
Origin and functions of intermittent transitions among sleep stages, including short awakenings and arousals, constitute a challenge to the current homeostatic framework for sleep regulation, focusing on factors modulating sleep over large time scales. Here we propose that the complex micro-architecture characterizing the sleep-wake cycle results from an underlying non-equilibrium critical dynamics, bridging collective behaviors across spatio-temporal scales. We investigate θ and δ wave dynamics in control rats and in rats with lesions of sleep-promoting neurons in the parafacial zone. We demonstrate that intermittent bursts in θ and δ rhythms exhibit a complex temporal organization, with long-range power-law correlations and a robust duality of power law (θ-bursts, active phase) and exponential-like (δ-bursts, quiescent phase) duration distributions, typical features of non-equilibrium systems self-organizing at criticality. Crucially, such temporal organization relates to anti-correlated coupling between θ- and δ-bursts, and is independent of the dominant physiologic state and lesions, a solid indication of a basic principle in sleep dynamics.
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Affiliation(s)
- Jilin W. J. L. Wang
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts, United States of America
| | - Fabrizio Lombardi
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts, United States of America
- Institute of Science and Technology Austria, A-3400 Klosterneuburg, Austria
| | - Xiyun Zhang
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts, United States of America
| | - Christelle Anaclet
- Department of Neurobiology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America
- Department of Neurology, Division of Sleep Medicine, Harvard Medical School and Beth Israel Deaconess Medical Center, Boston, Massachusetts, United States of America
| | - Plamen Ch. Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts, United States of America
- Department of Neurology, Division of Sleep Medicine, Harvard Medical School and Beth Israel Deaconess Medical Center, Boston, Massachusetts, United States of America
- Harvard Medical School and Division of Sleep Medicine, Brigham and Women’s Hospital, Boston, Massachusetts, United States of America
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20
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Visual and kinesthetic modes affect motor imagery classification in untrained subjects. Sci Rep 2019; 9:9838. [PMID: 31285468 PMCID: PMC6614413 DOI: 10.1038/s41598-019-46310-9] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2018] [Accepted: 06/21/2019] [Indexed: 11/20/2022] Open
Abstract
The understanding of neurophysiological mechanisms responsible for motor imagery (MI) is essential for the development of brain-computer interfaces (BCI) and bioprosthetics. Our magnetoencephalographic (MEG) experiments with voluntary participants confirm the existence of two types of motor imagery, kinesthetic imagery (KI) and visual imagery (VI), distinguished by activation and inhibition of different brain areas in motor-related α- and β-frequency regions. Although the brain activity corresponding to MI is usually observed in specially trained subjects or athletes, we show that it is also possible to identify particular features of MI in untrained subjects. Similar to real movement, KI implies muscular sensation when performing an imaginary moving action that leads to event-related desynchronization (ERD) of motor-associated brain rhythms. By contrast, VI refers to visualization of the corresponding action that results in event-related synchronization (ERS) of α- and β-wave activity. A notable difference between KI and VI groups occurs in the frontal brain area. In particular, the analysis of evoked responses shows that in all KI subjects the activity in the frontal cortex is suppressed during MI, while in the VI subjects the frontal cortex is always active. The accuracy in classification of left-arm and right-arm MI using artificial intelligence is similar for KI and VI. Since untrained subjects usually demonstrate the VI imagery mode, the possibility to increase the accuracy for VI is in demand for BCIs. The application of artificial neural networks allows us to classify MI in raising right and left arms with average accuracy of 70% for both KI and VI using appropriate filtration of input signals. The same average accuracy is achieved by optimizing MEG channels and reducing their number to only 13.
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21
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Self-Adaptive Fault Feature Extraction of Rolling Bearings Based on Enhancing Mode Characteristic of Complete Ensemble Empirical Mode Decomposition with Adaptive Noise. Symmetry (Basel) 2019. [DOI: 10.3390/sym11040513] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Originally, a rolling bearing, as a key part in rotating machinery, is a cyclic symmetric structure. When a fault occurs, it disrupts the symmetry and influences the normal operation of the rolling bearing. To accurately identify faults of rolling bearing, a novel method is proposed, which is based enhancing the mode characteristics of complete ensemble empirical mode decomposition with adaptive noise (CEEMDAN). It includes two parts: the first is the enhancing decomposition of CEEMDAN algorithm, and the second is the identified method of intrinsic information mode (IIM) of vibration signal. For the first part, the new mode functions (CIMFs) are obtained by combing the adjacent intrinsic mode functions (IMFs) and performing the corresponding Fast Fourier Transform (FFT) to strengthen difference feature among IMFs. Then, probability density function (PDF) is used to estimate FFT of each CIMF to obtain overall information of frequency component. Finally, the final intrinsic mode functions (FIMFs) are obtained by proposing identified method of adjacent PDF based on geometrical similarity (modified Hausdorff distance (MHD)). FIMFs indicate the minimum amount of mode information with physical meanings and avoid interference of spurious mode in original CEEMDAN decomposing. Subsequently, comprehensive evaluate index (Kurtosis and de-trended fluctuation analysis (DFA)) is proposed to identify IIM in FIMFs. Experiment results indicate that the proposed method demonstrates superior performance and can accurately extract characteristic frequencies of rolling bearing.
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22
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Roerdink M, de Jonge CP, Smid LM, Daffertshofer A. Tightening Up the Control of Treadmill Walking: Effects of Maneuverability Range and Acoustic Pacing on Stride-to-Stride Fluctuations. Front Physiol 2019; 10:257. [PMID: 30967787 PMCID: PMC6440225 DOI: 10.3389/fphys.2019.00257] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2018] [Accepted: 02/26/2019] [Indexed: 12/03/2022] Open
Abstract
The correlational structure of stride-to-stride fluctuations differs between healthy and pathological gait. Uncorrelated and anti-persistent stride-to-stride fluctuations are believed to indicate pathology whereas persistence represents healthy functioning. However, this reading can be questioned because the correlational structure changes with task constraints, like acoustic pacing, signifying the tightness of control over particular gait parameters. We tested this "tightness-of-control interpretation" by varying the maneuverability range during treadmill walking (small, intermediate, and large walking areas), with and without acoustic pacing. Stride-speed fluctuations exhibited anti-persistence, suggesting that stride speeds were tightly controlled, with a stronger degree of anti-persistence for smaller walking areas. Constant-speed goal-equivalent-manifold decompositions revealed simultaneous control of stride times and stride lengths, especially for smaller walking areas to limit stride-speed fluctuations. With acoustic pacing, participants followed both constant-speed and constant-stride-time task goals. This was reflected by a strong degree of anti-persistence around the stride-time by stride-length point that uniquely satisfied both goals. Our results strongly support the notion that anti-persistence in stride-to-stride fluctuations reflect the tightness of control over the associated gait parameter, while not tightly regulated gait parameters exhibit statistical persistence. We extend the existing body of knowledge by showing quantitative changes in anti-persistence of already tightly regulated stride-speed fluctuations.
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Affiliation(s)
- Melvyn Roerdink
- Department of Human Movement Sciences, Faculty of Behavioural and Movement Sciences, Amsterdam Movement Sciences and Institute for Brain and Behavior Amsterdam, Vrije Universiteit Amsterdam, Amsterdam, Netherlands
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23
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Identifying the Occurrence Time of the Deadly Mexico M8.2 Earthquake on 7 September 2017. ENTROPY 2019; 21:e21030301. [PMID: 33267016 PMCID: PMC7514782 DOI: 10.3390/e21030301] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/09/2019] [Revised: 03/15/2019] [Accepted: 03/16/2019] [Indexed: 11/17/2022]
Abstract
It has been shown that some dynamic features hidden in the time series of complex systems can be unveiled if we analyze them in a time domain termed natural time. In this analysis, we can identify when a system approaches a critical point (dynamic phase transition). Here, based on natural time analysis, which enables the introduction of an order parameter for seismicity, we discuss a procedure through which we could achieve the identification of the occurrence time of the M8.2 earthquake that occurred on 7 September 2017 in Mexico in Chiapas region, which is the largest magnitude event recorded in Mexico in more than a century. In particular, we first investigated the order parameter fluctuations of seismicity in the entire Mexico and found that, during an almost 30-year period, i.e., from 1 January 1988 until the M8.2 earthquake occurrence, they were minimized around 27 July 2017. From this date, we started computing the variance of seismicity in Chiapas region and found that it approached the critical value 0.070 on 6 September 2017, almost one day before this M8.2 earthquake occurrence.
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24
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Faes L, Pereira MA, Silva ME, Pernice R, Busacca A, Javorka M, Rocha AP. Multiscale information storage of linear long-range correlated stochastic processes. Phys Rev E 2019; 99:032115. [PMID: 30999519 DOI: 10.1103/physreve.99.032115] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Indexed: 11/07/2022]
Abstract
Information storage, reflecting the capability of a dynamical system to keep predictable information during its evolution over time, is a key element of intrinsic distributed computation, useful for the description of the dynamical complexity of several physical and biological processes. Here we introduce a parametric approach which allows one to compute information storage across multiple timescales in stochastic processes displaying both short-term dynamics and long-range correlations (LRC). Our analysis is performed in the popular framework of multiscale entropy, whereby a time series is first "coarse grained" at the chosen timescale through low-pass filtering and downsampling, and then its complexity is evaluated in terms of conditional entropy. Within this framework, our approach makes use of linear fractionally integrated autoregressive (ARFI) models to derive analytical expressions for the information storage computed at multiple timescales. Specifically, we exploit state space models to provide the representation of lowpass filtered and downsampled ARFI processes, from which information storage is computed at any given timescale relating the process variance to the prediction error variance. This enhances the practical usability of multiscale information storage, as it enables a computationally reliable quantification of a complexity measure which incorporates the effects of LRC together with that of short-term dynamics. The proposed measure is first assessed in simulated ARFI processes reproducing different types of autoregressive dynamics and different degrees of LRC, studying both the theoretical values and the finite sample performance. We find that LRC alter substantially the complexity of ARFI processes even at short timescales, and that reliable estimation of complexity can be achieved at longer timescales only when LRC are properly modeled. Then, we assess multiscale information storage in physiological time series measured in humans during resting state and postural stress, revealing unprecedented responses to stress of the complexity of heart period and systolic arterial pressure variability, which are related to the different role played by LRC in the two conditions.
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Affiliation(s)
- Luca Faes
- Department of Engineering, University of Palermo, Viale delle Scienze, Bldg. 9, 90128 Palermo, Italy
| | - Margarida Almeida Pereira
- Faculdade de Ciências, Universidade do Porto, Rua Campo Alegre, Porto, Portugal.,Centro de Matemática da Universidade do Porto (CMUP), Porto, Portugal
| | - Maria Eduarda Silva
- Faculdade de Economia, Universidade do Porto, Rua Dr. Roberto Frias, Porto, Portugal.,Centro de Investigação e Desenvolvimento em Matemática e Aplicações (CIDMA), Aveiro, Portugal
| | - Riccardo Pernice
- Department of Engineering, University of Palermo, Viale delle Scienze, Bldg. 9, 90128 Palermo, Italy
| | - Alessandro Busacca
- Department of Engineering, University of Palermo, Viale delle Scienze, Bldg. 9, 90128 Palermo, Italy
| | - Michal Javorka
- Department of Physiology, Jessenius Faculty of Medicine, Comenius University in Bratislava, Mala Hora 4C, 03601 Martin, Slovakia.,Biomedical Center Martin, Jessenius Faculty of Medicine, Comenius University in Bratislava, Mala Hora 4C, 03601 Martin, Slovakia
| | - Ana Paula Rocha
- Faculdade de Ciências, Universidade do Porto, Rua Campo Alegre, Porto, Portugal.,Centro de Matemática da Universidade do Porto (CMUP), Porto, Portugal
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25
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Höll M, Kiyono K, Kantz H. Theoretical foundation of detrending methods for fluctuation analysis such as detrended fluctuation analysis and detrending moving average. Phys Rev E 2019; 99:033305. [PMID: 30999507 DOI: 10.1103/physreve.99.033305] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2018] [Indexed: 06/09/2023]
Abstract
We present a bottom-up derivation of fluctuation analysis with detrending for the detection of long-range correlations in the presence of additive trends or intrinsic nonstationarities. While the well-known detrended fluctuation analysis (DFA) and detrending moving average (DMA) were introduced ad hoc, we claim basic principles for such methods where DFA and DMA are then shown to be specific realizations. The mean-squared displacement of the summed time series contains the same information about long-range correlations as the autocorrelation function but has much better statistical properties for large time lags. However, the scaling exponent of its estimator on a single time series is affected not only by trends on the data but also by intrinsic nonstationarities. We therefore define the fluctuation function as mean-squared displacement with weighting kernel. We require that its estimator be unbiased and exhibit the correct scaling behavior for the random component of a signal, which is only achieved if the weighting kernel implies detrending. We show how DFA and DMA satisfy these requirements and we extract their kernel weights.
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Affiliation(s)
- Marc Höll
- Department of Physics, Institute of Nanotechnology and Advanced Materials, Bar-Ilan University, Ramat-Gan 52900, Israel
| | - Ken Kiyono
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
| | - Holger Kantz
- Max Planck Institute for the Physics of Complex Systems, Nöthnitzer Straße 38, 01187 Dresden, Germany
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26
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Nataj A, Eftekhari G, Raoufy MR, Mani AR. The effect of fractal-like mechanical ventilation on vital signs in a rat model of acute-on-chronic liver failure. Physiol Meas 2018; 39:114008. [PMID: 30475741 DOI: 10.1088/1361-6579/aaea10] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
OBJECTIVE The network of interactions between different organs is impaired in liver cirrhosis. Liver cirrhosis is associated with multi-system involvement, which eventually leads to multiple organ failure. This process is accelerated by a precipitating factor such as bacterial infection, which leads to respiratory distress, circulatory shock, neural dysfunction and very high mortality. Cirrhotic patients often have blunted respiratory sinus arrhythmia and impaired cardio-respiratory variability. Fractal-like mechanical ventilation is reported to enhance respiratory sinus arrhythmia and attenuate respiratory distress in experimental models. In the present study we hypothesise that fractal-like mechanical ventilation may improve the outcome of cirrhotic rats with multiple organ failure. APPROACH Cirrhosis was induced by chronic biliary obstruction in rats. Acute multiple organ failure was induced by intraperitoneal injection of bacterial endotoxin in cirrhotic rats. The effect of conventional mechanical ventilation (with constant tidal volume and respiratory rate) or fractal-like ventilation (with the same average but variable tidal volume and respiratory rate) were assessed on vital signs, oxygen saturation and plasma alanine aminotransferase in anaesthetised cirrhotic rats. MAIN RESULTS We demonstrated that fractal-like mechanical ventilation was accompanied by improved oxygen saturation, reduced heart rate and decreased liver injury following injection of bacterial endotoxin. Moreover, variable mechanical ventilation in cirrhotic rats reduced mortality and prevented a fall in short-term heart rate variability following endotoxin challenge in comparison with rats with constant mechanical ventilation. SIGNIFICANCE We suggest further investigations into the beneficial effects of fractal-like ventilation strategy in critically ill patients with liver failure requiring organ support and mechanical ventilation.
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Affiliation(s)
- Arman Nataj
- Faculty of Medical Sciences, Department of Physiology, Tarbiat Modares University, Tehran, Iran. These authors are joint first authors
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27
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Sanz-Garcia A, Rings T, Lehnertz K. Impact of type of intracranial EEG sensors on link strengths of evolving functional brain networks. Physiol Meas 2018; 39:074003. [PMID: 29932428 DOI: 10.1088/1361-6579/aace94] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Objective and Approach: Investigating properties of evolving functional brain networks has become a valuable tool to characterize the complex dynamics of the epileptic brain. Such networks are usually derived from electroencephalograms (EEG) recorded with sensors implanted chronically into deeper structures of the brain and/or placed onto the cortex. It is still unclear, however, whether the use of different sensors for an identification of network nodes affects properties of functional brain networks. We address this question by investigating properties of links of such networks that we characterize by assessing interactions in multi-sensor, multi-day EEG data recorded from 49 epilepsy patients during presurgical evaluation. These data allow us to study the impact of different types of sensors together with the impact of various physiologic and pathophysiologic activities on the properties of links. MAIN RESULTS We observe that different types of sensors differently impact on spatial means and temporal fluctuations of link strengths. Moreover, the impact depends on the relative anatomical location of sensors with respect to location and extent of sources of the prevailing activities. SIGNIFICANCE Type and location of sensors should be considered when constructing networks.
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Affiliation(s)
- Ancor Sanz-Garcia
- Instituto de Investigacion Sanitaria, Hospital Universitario De La Princesa, C/Diego de Leon 62, 28006 Madrid, Spain
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Qin YH, Zhao ZD, Cai SM, Gao L, Stanley HE. Dual-induced multifractality in online viewing activity. CHAOS (WOODBURY, N.Y.) 2018; 28:013114. [PMID: 29390640 DOI: 10.1063/1.5003100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Although recent studies have found that the long-term correlations relating to the fat-tailed distribution of inter-event times exist in human activity and that these correlations indicate the presence of fractality, the property of fractality and its origin have not been analyzed. We use both detrended fluctuation analysis and multifractal detrended fluctuation analysis to analyze the time series in online viewing activity separating from Movielens and Netflix. We find long-term correlations at both the individual and communal levels and that the extent of correlation at the individual level is determined by the activity level. These long-term correlations also indicate that there is fractality in the pattern of online viewing. We first find a multifractality that results from the combined effect of the fat-tailed distribution of inter-event times (i.e., the times between successive viewing actions of individuals) and the long-term correlations in online viewing activity and verify this finding using three synthesized series. Therefore, it can be concluded that the multifractality in online viewing activity is caused by both the fat-tailed distribution of inter-event times and the long-term correlations and that this enlarges the generic property of human activity to include not just physical space but also cyberspace.
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Affiliation(s)
- Yu-Hao Qin
- Web Sciences Center, School of Computer Science and Engineering, University of Electronic Science and Technology of China, Chengdu 611731, People's Republic of China
| | - Zhi-Dan Zhao
- Web Sciences Center, School of Computer Science and Engineering, University of Electronic Science and Technology of China, Chengdu 611731, People's Republic of China
| | - Shi-Min Cai
- Web Sciences Center, School of Computer Science and Engineering, University of Electronic Science and Technology of China, Chengdu 611731, People's Republic of China
| | - Liang Gao
- Institute of Systems Science, School of Traffic and Transportation, Beijing Jiaotong University, Beijing 100044, People's Republic of China
| | - H Eugene Stanley
- Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts 02215, USA
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29
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Wiltshire TJ, Euler MJ, McKinney TL, Butner JE. Changes in Dimensionality and Fractal Scaling Suggest Soft-Assembled Dynamics in Human EEG. Front Physiol 2017; 8:633. [PMID: 28919862 PMCID: PMC5585189 DOI: 10.3389/fphys.2017.00633] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2016] [Accepted: 08/14/2017] [Indexed: 01/20/2023] Open
Abstract
Humans are high-dimensional, complex systems consisting of many components that must coordinate in order to perform even the simplest of activities. Many behavioral studies, especially in the movement sciences, have advanced the notion of soft-assembly to describe how systems with many components coordinate to perform specific functions while also exhibiting the potential to re-structure and then perform other functions as task demands change. Consistent with this notion, within cognitive neuroscience it is increasingly accepted that the brain flexibly coordinates the networks needed to cope with changing task demands. However, evaluation of various indices of soft-assembly has so far been absent from neurophysiological research. To begin addressing this gap, we investigated task-related changes in two distinct indices of soft-assembly using the established phenomenon of EEG repetition suppression. In a repetition priming task, we assessed evidence for changes in the correlation dimension and fractal scaling exponents during stimulus-locked event-related potentials, as a function of stimulus onset and familiarity, and relative to spontaneous non-task-related activity. Consistent with predictions derived from soft-assembly, results indicated decreases in dimensionality and increases in fractal scaling exponents from resting to pre-stimulus states and following stimulus onset. However, contrary to predictions, familiarity tended to increase dimensionality estimates. Overall, the findings support the view from soft-assembly that neural dynamics should become increasingly ordered as external task demands increase, and support the broader application of soft-assembly logic in understanding human behavior and electrophysiology.
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Affiliation(s)
- Travis J Wiltshire
- Department of Psychology, University of UtahSalt Lake City, UT, United States.,Department of Language and Communication, Centre for Human Interactivity, University of Southern DenmarkOdense, Denmark
| | - Matthew J Euler
- Department of Psychology, University of UtahSalt Lake City, UT, United States
| | - Ty L McKinney
- Department of Psychology, University of UtahSalt Lake City, UT, United States
| | - Jonathan E Butner
- Department of Psychology, University of UtahSalt Lake City, UT, United States
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30
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Lima GZDS, Corso G, Correa MA, Sommer RL, Ivanov PC, Bohn F. Universal temporal characteristics and vanishing of multifractality in Barkhausen avalanches. Phys Rev E 2017; 96:022159. [PMID: 28950597 DOI: 10.1103/physreve.96.022159] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2017] [Indexed: 06/07/2023]
Abstract
Barkhausen effect in ferromagnetic materials provides an excellent area for investigating scaling phenomena found in disordered systems exhibiting crackling noise. The critical dynamics is characterized by random pulses or avalanches with scale-invariant properties, power-law distributions, and universal features. However, the traditional Barkhausen avalanches statistics may not be sufficient to fully characterize the complex temporal correlation of the magnetic domain walls dynamics. Here we focus on the multifractal scenario to quantify the temporal scaling characteristics of Barkhausen avalanches in polycrystalline and amorphous ferromagnetic films with thicknesses from 50 to 1000 nm. We show that the multifractal properties are dependent on film thickness, although they seem to be insensitive to the structural character of the materials. Moreover, we observe for the first time the vanishing of the multifractality in the domain walls dynamics. As the thickness is reduced, the multifractal behavior gives place to a monofractal one over the entire range of time scales. This reorganization in the temporal scaling characteristics of Barkhausen avalanches is understood as a universal restructuring associated to the dimensional crossover, from three- to two-dimensional magnetization dynamics.
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Affiliation(s)
- G Z Dos Santos Lima
- Escola de Ciências e Tecnologia, Universidade Federal do Rio Grande do Norte, 59078-970 Natal, RN, Brazil
- Departamento de Biofísica e Farmacologia, Universidade Federal do Rio Grande do Norte, 59078-970 Natal, RN, Brazil
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215, USA
| | - G Corso
- Departamento de Biofísica e Farmacologia, Universidade Federal do Rio Grande do Norte, 59078-970 Natal, RN, Brazil
| | - M A Correa
- Departamento de Física, Universidade Federal do Rio Grande do Norte, 59078-900 Natal, RN, Brazil
| | - R L Sommer
- Centro Brasileiro de Pesquisas Físicas, Rua Dr. Xavier Sigaud 150, Urca, 22290-180 Rio de Janeiro, RJ, Brazil
| | - P Ch Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215, USA
- Harvard Medical School and Division of Sleep Medicine, Brigham and Women Hospital, Boston, Massachusetts 02115, USA
- Institute of Solid State Physics, Bulgarian Academy of Sciences, Sofia 1784, Bulgaria
| | - F Bohn
- Departamento de Física, Universidade Federal do Rio Grande do Norte, 59078-900 Natal, RN, Brazil
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31
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Spurious Results of Fluctuation Analysis Techniques in Magnitude and Sign Correlations. ENTROPY 2017. [DOI: 10.3390/e19060261] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Fluctuation Analysis (FA) and specially Detrended Fluctuation Analysis (DFA) are techniques commonly used to quantify correlations and scaling properties of complex time series such as the observable outputs of great variety of dynamical systems, from Economics to Physiology. Often, such correlated time series are analyzed using the magnitude and sign decomposition, i.e., by using FA or DFA to study separately the sign and the magnitude series obtained from the original signal. This approach allows for distinguishing between systems with the same linear correlations but different dynamical properties. However, here we present analytical and numerical evidence showing that FA and DFA can lead to spurious results when applied to sign and magnitude series obtained from power-law correlated time series of fractional Gaussian noise (fGn) type. Specifically, we show that: (i) the autocorrelation functions of the sign and magnitude series obtained from fGns are always power-laws; However, (ii) when the sign series presents power-law anticorrelations, FA and DFA wrongly interpret the sign series as purely uncorrelated; Similarly, (iii) when analyzing power-law correlated magnitude (or volatility) series, FA and DFA fail to retrieve the real scaling properties, and identify the magnitude series as purely uncorrelated noise; Finally, (iv) using the relationship between FA and DFA and the autocorrelation function of the time series, we explain analytically the reason for the FA and DFA spurious results, which turns out to be an intrinsic property of both techniques when applied to sign and magnitude series.
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32
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Xiong W, Faes L, Ivanov PC. Entropy measures, entropy estimators, and their performance in quantifying complex dynamics: Effects of artifacts, nonstationarity, and long-range correlations. Phys Rev E 2017; 95:062114. [PMID: 28709192 PMCID: PMC6117159 DOI: 10.1103/physreve.95.062114] [Citation(s) in RCA: 97] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2017] [Indexed: 11/07/2022]
Abstract
Entropy measures are widely applied to quantify the complexity of dynamical systems in diverse fields. However, the practical application of entropy methods is challenging, due to the variety of entropy measures and estimators and the complexity of real-world time series, including nonstationarities and long-range correlations (LRC). We conduct a systematic study on the performance, bias, and limitations of three basic measures (entropy, conditional entropy, information storage) and three traditionally used estimators (linear, kernel, nearest neighbor). We investigate the dependence of entropy measures on estimator- and process-specific parameters, and we show the effects of three types of nonstationarities due to artifacts (trends, spikes, local variance change) in simulations of stochastic autoregressive processes. We also analyze the impact of LRC on the theoretical and estimated values of entropy measures. Finally, we apply entropy methods on heart rate variability data from subjects in different physiological states and clinical conditions. We find that entropy measures can only differentiate changes of specific types in cardiac dynamics and that appropriate preprocessing is vital for correct estimation and interpretation. Demonstrating the limitations of entropy methods and shedding light on how to mitigate bias and provide correct interpretations of results, this work can serve as a comprehensive reference for the application of entropy methods and the evaluation of existing studies.
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Affiliation(s)
- Wanting Xiong
- School of Systems Science, Beijing Normal University, Beijing 100875, People’s Republic of China
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215, USA
| | - Luca Faes
- Bruno Kessler Foundation and BIOtech, University of Trento, Trento 38123, Italy
| | - Plamen Ch. Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215, USA
- Harvard Medical School and Division of Sleep Medicine, Brigham and Women’s Hospital, Boston, Massachusetts 02115, USA
- Institute of Solid State Physics, Bulgarian Academy of Sciences, Sofia 1784, Bulgaria
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33
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Kuznetsov NA, Rhea CK. Power considerations for the application of detrended fluctuation analysis in gait variability studies. PLoS One 2017; 12:e0174144. [PMID: 28323871 PMCID: PMC5360325 DOI: 10.1371/journal.pone.0174144] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2016] [Accepted: 01/24/2017] [Indexed: 12/03/2022] Open
Abstract
The assessment of gait variability using stochastic signal processing techniques such as detrended fluctuation analysis (DFA) has been shown to be a sensitive tool for evaluation of gait alterations due to aging and neuromuscular disease. However, previous studies have suggested that the application of DFA requires relatively long recordings (600 strides), which is difficult when working with clinical populations or older adults. In this paper we propose a model for predicting DFA variance in experimental data and conduct a Monte Carlo simulation to estimate the sample size and number of trials required to detect a change in DFA scaling exponent. We illustrate the model in a simulation to detect a difference of 0.1 (medium effect) between two groups of subjects when using short gait time series (100 to 200 strides) in the context of between- and within-subject designs. We assumed that the variance of DFA scaling exponent arises due to individual differences, time series length, and experimental error. Results showed that sample sizes required to achieve acceptable power of 80% are practically feasible, especially when using within-subject designs. For example, to detect a group difference in the DFA scaling exponent of 0.1, it would require either 25 subjects and 2 trials per subject or 12 subjects and 4 trials per subject using a within-subject design. We then compared plausibility of such power predictions to the empirically observed power from a study that required subjects to synchronize with a persistent fractal metronome. The results showed that the model adequately predicted the empirical pattern of results. Our power simulations could be used in conjunction with previous design guidelines in the literature when planning new gait variability experiments.
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Affiliation(s)
- Nikita A. Kuznetsov
- Department of Kinesiology, University of North Carolina at Greensboro, Greensboro, North Carolina, United States of America
- * E-mail:
| | - Christopher K. Rhea
- Department of Kinesiology, University of North Carolina at Greensboro, Greensboro, North Carolina, United States of America
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34
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Höll M, Kantz H, Zhou Y. Detrended fluctuation analysis and the difference between external drifts and intrinsic diffusionlike nonstationarity. Phys Rev E 2016; 94:042201. [PMID: 27841528 DOI: 10.1103/physreve.94.042201] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2016] [Indexed: 06/06/2023]
Abstract
Detrended fluctuation analysis (DFA) has been shown to be an effective method to study long-range correlation of nonstationary series. In principle, DFA considers F_{DFA}^{2}(s), the mean of variance around the local polynomial fit in segments with length s, and then estimates the scaling exponent α_{DFA} in F_{DFA}(s)∼s^{α_{DFA}} with varying s. Usually, the methodological studies of DFA focus on its effect on removing the drift due to the external trends. Only few paid attention to nonstationary series without drift, such as fractional Brownian motion (FBM) with nonstationarity due to its intrinsic dynamics. Both of these types of nonstationarity can shift the local mean by drift or diffusion and can be treated as the additive nonstationarity eliminable by the additive decomposition. In this study, we limit our discussion to such additive nonstationarity and furthermore specifically distinguish these two types of nonstationarity, namely the drift and the intrinsic diffusionlike nonstationarity. To understand how DFA works for the intrinsic diffusionlike nonstationarity, we take FBM as the example and seek for the answers to two fundamental questions: (1) what DFA removes from FBM; and (2) why DFA can handle such intrinsic diffusionlike nonstationarity, in contrast to methods only applicable to stationary series such as the fluctuation analysis. A crucial condition, i.e., statistical equivalence among all segments, is proposed and checked in the fluctuation analysis and DFA. As shown, the crucial condition is a natural requirement for the connection between DFA and autocorrelation function. With the help of the crucial condition, our study analytically and numerically demonstrates for the intrinsic diffusionlike nonstationary series that (1) rather than the nonstationarity as thought, DFA actually removes the difference among all segments; (2) the detrended segments fulfill the crucial condition so that the average over segments becomes equivalent to the ensemble average over realizations. These answers are also true for series with a drift. Thus, we provide a unified perspective to refresh the understanding of how DFA works on nonstationarity and underpin the mathematical ground of DFA.
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Affiliation(s)
- Marc Höll
- Max Planck Institute for the Physics of Complex Systems, Nöthnitzer Straße 38, 01187 Dresden, Germany
| | - Holger Kantz
- Max Planck Institute for the Physics of Complex Systems, Nöthnitzer Straße 38, 01187 Dresden, Germany
| | - Yu Zhou
- Max Planck Institute for the Physics of Complex Systems, Nöthnitzer Straße 38, 01187 Dresden, Germany
- Institute of Future Cities and Stanley Ho Big Data Decision Analytics Research Centre, The Chinese University of Hong Kong, Hong Kong, China
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35
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Kiyono K, Tsujimoto Y. Time and frequency domain characteristics of detrending-operation-based scaling analysis: Exact DFA and DMA frequency responses. Phys Rev E 2016; 94:012111. [PMID: 27575081 DOI: 10.1103/physreve.94.012111] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2016] [Indexed: 11/07/2022]
Abstract
We develop a general framework to study the time and frequency domain characteristics of detrending-operation-based scaling analysis methods, such as detrended fluctuation analysis (DFA) and detrending moving average (DMA) analysis. In this framework, using either the time or frequency domain approach, the frequency responses of detrending operations are calculated analytically. Although the frequency domain approach based on conventional linear analysis techniques is only applicable to linear detrending operations, the time domain approach presented here is applicable to both linear and nonlinear detrending operations. Furthermore, using the relationship between the time and frequency domain representations of the frequency responses, the frequency domain characteristics of nonlinear detrending operations can be obtained. Based on the calculated frequency responses, it is possible to establish a direct connection between the root-mean-square deviation of the detrending-operation-based scaling analysis and the power spectrum for linear stochastic processes. Here, by applying our methods to DFA and DMA, including higher-order cases, exact frequency responses are calculated. In addition, we analytically investigate the cutoff frequencies of DFA and DMA detrending operations and show that these frequencies are not optimally adjusted to coincide with the corresponding time scale.
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Affiliation(s)
- Ken Kiyono
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
| | - Yutaka Tsujimoto
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
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36
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Varotsos CA, Mazei YA, Burkovsky I, Efstathiou MN, Tzanis CG. Climate scaling behaviour in the dynamics of the marine interstitial ciliate community. THEORETICAL AND APPLIED CLIMATOLOGY 2016; 125:439-447. [DOI: 10.1007/s00704-015-1520-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
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37
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Carbone A, Kiyono K. Detrending moving average algorithm: Frequency response and scaling performances. Phys Rev E 2016; 93:063309. [PMID: 27415389 DOI: 10.1103/physreve.93.063309] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2016] [Indexed: 06/06/2023]
Abstract
The Detrending Moving Average (DMA) algorithm has been widely used in its several variants for characterizing long-range correlations of random signals and sets (one-dimensional sequences or high-dimensional arrays) over either time or space. In this paper, mainly based on analytical arguments, the scaling performances of the centered DMA, including higher-order ones, are investigated by means of a continuous time approximation and a frequency response approach. Our results are also confirmed by numerical tests. The study is carried out for higher-order DMA operating with moving average polynomials of different degree. In particular, detrending power degree, frequency response, asymptotic scaling, upper limit of the detectable scaling exponent, and finite scale range behavior will be discussed.
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Affiliation(s)
- Anna Carbone
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, 10129 Torino, Italy
| | - Ken Kiyono
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
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38
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Tsujimoto Y, Miki Y, Shimatani S, Kiyono K. Fast algorithm for scaling analysis with higher-order detrending moving average method. Phys Rev E 2016; 93:053304. [PMID: 27301002 DOI: 10.1103/physreve.93.053304] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Indexed: 06/06/2023]
Abstract
Among scaling analysis methods based on the root-mean-square deviation from the estimated trend, it has been demonstrated that centered detrending moving average (DMA) analysis with a simple moving average has good performance when characterizing long-range correlation or fractal scaling behavior. Furthermore, higher-order DMA has also been proposed; it is shown to have better detrending capabilities, removing higher-order polynomial trends than original DMA. However, a straightforward implementation of higher-order DMA requires a very high computational cost, which would prevent practical use of this method. To solve this issue, in this study, we introduce a fast algorithm for higher-order DMA, which consists of two techniques: (1) parallel translation of moving averaging windows by a fixed interval; (2) recurrence formulas for the calculation of summations. Our algorithm can significantly reduce computational cost. Monte Carlo experiments show that the computational time of our algorithm is approximately proportional to the data length, although that of the conventional algorithm is proportional to the square of the data length. The efficiency of our algorithm is also shown by a systematic study of the performance of higher-order DMA, such as the range of detectable scaling exponents and detrending capability for removing polynomial trends. In addition, through the analysis of heart-rate variability time series, we discuss possible applications of higher-order DMA.
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Affiliation(s)
- Yutaka Tsujimoto
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
| | - Yuki Miki
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
| | - Satoshi Shimatani
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
| | - Ken Kiyono
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
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39
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Gómez-Extremera M, Carpena P, Ivanov PC, Bernaola-Galván PA. Magnitude and sign of long-range correlated time series: Decomposition and surrogate signal generation. Phys Rev E 2016; 93:042201. [PMID: 27176287 DOI: 10.1103/physreve.93.042201] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2015] [Indexed: 11/07/2022]
Abstract
We systematically study the scaling properties of the magnitude and sign of the fluctuations in correlated time series, which is a simple and useful approach to distinguish between systems with different dynamical properties but the same linear correlations. First, we decompose artificial long-range power-law linearly correlated time series into magnitude and sign series derived from the consecutive increments in the original series, and we study their correlation properties. We find analytical expressions for the correlation exponent of the sign series as a function of the exponent of the original series. Such expressions are necessary for modeling surrogate time series with desired scaling properties. Next, we study linear and nonlinear correlation properties of series composed as products of independent magnitude and sign series. These surrogate series can be considered as a zero-order approximation to the analysis of the coupling of magnitude and sign in real data, a problem still open in many fields. We find analytical results for the scaling behavior of the composed series as a function of the correlation exponents of the magnitude and sign series used in the composition, and we determine the ranges of magnitude and sign correlation exponents leading to either single scaling or to crossover behaviors. Finally, we obtain how the linear and nonlinear properties of the composed series depend on the correlation exponents of their magnitude and sign series. Based on this information we propose a method to generate surrogate series with controlled correlation exponent and multifractal spectrum.
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Affiliation(s)
- Manuel Gómez-Extremera
- Dpto. de Física Aplicada II, ETSI de Telecomunicación, University of Málaga, 29071 Málaga, Spain
| | - Pedro Carpena
- Dpto. de Física Aplicada II, ETSI de Telecomunicación, University of Málaga, 29071 Málaga, Spain
| | - Plamen Ch Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, Massachusetts 02215, USA.,Harvard Medical School and Division of Sleep Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, USA.,Institute of Solid State Physics, Bulgarian Academy of Sciences, 1784 Sofia, Bulgaria
| | - Pedro A Bernaola-Galván
- Dpto. de Física Aplicada II, ETSI de Telecomunicación, University of Málaga, 29071 Málaga, Spain
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40
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Ton R, Daffertshofer A. Model selection for identifying power-law scaling. Neuroimage 2016; 136:215-26. [PMID: 26774613 DOI: 10.1016/j.neuroimage.2016.01.008] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2015] [Revised: 01/04/2016] [Accepted: 01/05/2016] [Indexed: 10/01/2022] Open
Abstract
Long-range temporal and spatial correlations have been reported in a remarkable number of studies. In particular power-law scaling in neural activity raised considerable interest. We here provide a straightforward algorithm not only to quantify power-law scaling but to test it against alternatives using (Bayesian) model comparison. Our algorithm builds on the well-established detrended fluctuation analysis (DFA). After removing trends of a signal, we determine its mean squared fluctuations in consecutive intervals. In contrast to DFA we use the values per interval to approximate the distribution of these mean squared fluctuations. This allows for estimating the corresponding log-likelihood as a function of interval size without presuming the fluctuations to be normally distributed, as is the case in conventional DFA. We demonstrate the validity and robustness of our algorithm using a variety of simulated signals, ranging from scale-free fluctuations with known Hurst exponents, via more conventional dynamical systems resembling exponentially correlated fluctuations, to a toy model of neural mass activity. We also illustrate its use for encephalographic signals. We further discuss confounding factors like the finite signal size. Our model comparison provides a proper means to identify power-law scaling including the range over which it is present.
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Affiliation(s)
- Robert Ton
- MOVE Research Institute, Department of Human Movement Sciences, VU Amsterdam, The Netherlands; Center for Brain and Cognition, Computational Neuroscience Group, Universitat Pompeu Fabra, Roc Boronat 138, Barcelona 08018, Spain
| | - Andreas Daffertshofer
- MOVE Research Institute, Department of Human Movement Sciences, VU Amsterdam, The Netherlands
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41
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Kiyono K. Establishing a direct connection between detrended fluctuation analysis and Fourier analysis. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:042925. [PMID: 26565322 DOI: 10.1103/physreve.92.042925] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2015] [Indexed: 06/05/2023]
Abstract
To understand methodological features of the detrended fluctuation analysis (DFA) using a higher-order polynomial fitting, we establish the direct connection between DFA and Fourier analysis. Based on an exact calculation of the single-frequency response of the DFA, the following facts are shown analytically: (1) in the analysis of stochastic processes exhibiting a power-law scaling of the power spectral density (PSD), S(f)∼f(-β), a higher-order detrending in the DFA has no adverse effect in the estimation of the DFA scaling exponent α, which satisfies the scaling relation α=(β+1)/2; (2) the upper limit of the scaling exponents detectable by the DFA depends on the order of polynomial fit used in the DFA, and is bounded by m+1, where m is the order of the polynomial fit; (3) the relation between the time scale in the DFA and the corresponding frequency in the PSD are distorted depending on both the order of the DFA and the frequency dependence of the PSD. We can improve the scale distortion by introducing the corrected time scale in the DFA corresponding to the inverse of the frequency scale in the PSD. In addition, our analytical approach makes it possible to characterize variants of the DFA using different types of detrending. As an application, properties of the detrending moving average algorithm are discussed.
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Affiliation(s)
- Ken Kiyono
- Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
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42
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Friction Signal Denoising Using Complete Ensemble EMD with Adaptive Noise and Mutual Information. ENTROPY 2015. [DOI: 10.3390/e17095965] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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43
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Abstract
In this work we devise a classification of mouse activity patterns based on accelerometer data using Detrended Fluctuation Analysis. We use two characteristic mouse behavioural states as benchmarks in this study: waking in free activity and slow-wave sleep (SWS). In both situations we find roughly the same pattern: for short time intervals we observe high correlation in activity - a typical 1/f complex pattern - while for large time intervals there is anti-correlation. High correlation of short intervals ( to : waking state and to : SWS) is related to highly coordinated muscle activity. In the waking state we associate high correlation both to muscle activity and to mouse stereotyped movements (grooming, waking, etc.). On the other side, the observed anti-correlation over large time scales ( to : waking state and to : SWS) during SWS appears related to a feedback autonomic response. The transition from correlated regime at short scales to an anti-correlated regime at large scales during SWS is given by the respiratory cycle interval, while during the waking state this transition occurs at the time scale corresponding to the duration of the stereotyped mouse movements. Furthermore, we find that the waking state is characterized by longer time scales than SWS and by a softer transition from correlation to anti-correlation. Moreover, this soft transition in the waking state encompass a behavioural time scale window that gives rise to a multifractal pattern. We believe that the observed multifractality in mouse activity is formed by the integration of several stereotyped movements each one with a characteristic time correlation. Finally, we compare scaling properties of body acceleration fluctuation time series during sleep and wake periods for healthy mice. Interestingly, differences between sleep and wake in the scaling exponents are comparable to previous works regarding human heartbeat. Complementarily, the nature of these sleep-wake dynamics could lead to a better understanding of neuroautonomic regulation mechanisms.
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Ivanov PC, Yuen A, Perakakis P. Impact of stock market structure on intertrade time and price dynamics. PLoS One 2014; 9:e92885. [PMID: 24699376 PMCID: PMC3974723 DOI: 10.1371/journal.pone.0092885] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2013] [Accepted: 02/27/2014] [Indexed: 11/19/2022] Open
Abstract
We analyse times between consecutive transactions for a diverse group of stocks registered on the NYSE and NASDAQ markets, and we relate the dynamical properties of the intertrade times with those of the corresponding price fluctuations. We report that market structure strongly impacts the scale-invariant temporal organisation in the transaction timing of stocks, which we have observed to have long-range power-law correlations. Specifically, we find that, compared to NYSE stocks, stocks registered on the NASDAQ exhibit significantly stronger correlations in their transaction timing on scales within a trading day. Further, we find that companies that transfer from the NASDAQ to the NYSE show a reduction in the correlation strength of transaction timing on scales within a trading day, indicating influences of market structure. We also report a persistent decrease in correlation strength of intertrade times with increasing average intertrade time and with corresponding decrease in companies' market capitalization–a trend which is less pronounced for NASDAQ stocks. Surprisingly, we observe that stronger power-law correlations in intertrade times are coupled with stronger power-law correlations in absolute price returns and higher price volatility, suggesting a strong link between the dynamical properties of intertrade times and the corresponding price fluctuations over a broad range of time scales. Comparing the NYSE and NASDAQ markets, we demonstrate that the stronger correlations we find in intertrade times for NASDAQ stocks are associated with stronger correlations in absolute price returns and with higher volatility, suggesting that market structure may affect price behavior through information contained in transaction timing. These findings do not support the hypothesis of universal scaling behavior in stock dynamics that is independent of company characteristics and stock market structure. Further, our results have implications for utilising transaction timing patterns in price prediction and risk management optimization on different stock markets.
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Affiliation(s)
- Plamen Ch. Ivanov
- Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts, United States of America
- Harvard Medical School and Division of Sleep Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America
- Institute of Solid State Physics, Bulgarian Academy of Sciences, Sofia, Bulgaria
- * E-mail:
| | - Ainslie Yuen
- Signal Processing Laboratory, Department of Engineering, Cambridge University, Cambridge, United Kingdom
| | - Pandelis Perakakis
- Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts, United States of America
- Laboratory of Experimental Economics, University Jaume I, Castellón, Spain
- Mind, Brain and Behaviour Research Centre (CIMCYC), University of Granada, Granada, Spain
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Varotsos CA, Franzke CLE, Efstathiou MN, Degermendzhi AG. Evidence for two abrupt warming events of SST in the last century. THEORETICAL AND APPLIED CLIMATOLOGY 2014; 116:51-60. [DOI: 10.1007/s00704-013-0935-8] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
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46
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Zhou J, Manor B, Liu D, Hu K, Zhang J, Fang J. The complexity of standing postural control in older adults: a modified detrended fluctuation analysis based upon the empirical mode decomposition algorithm. PLoS One 2013; 8:e62585. [PMID: 23650518 PMCID: PMC3641070 DOI: 10.1371/journal.pone.0062585] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2012] [Accepted: 03/23/2013] [Indexed: 11/18/2022] Open
Abstract
Human aging into senescence diminishes the capacity of the postural control system to adapt to the stressors of everyday life. Diminished adaptive capacity may be reflected by a loss of the fractal-like, multiscale complexity within the dynamics of standing postural sway (i.e., center-of-pressure, COP). We therefore studied the relationship between COP complexity and adaptive capacity in 22 older and 22 younger healthy adults. COP magnitude dynamics were assessed from raw data during quiet standing with eyes open and closed, and complexity was quantified with a new technique termed empirical mode decomposition embedded detrended fluctuation analysis (EMD-DFA). Adaptive capacity of the postural control system was assessed with the sharpened Romberg test. As compared to traditional DFA, EMD-DFA more accurately identified trends in COP data with intrinsic scales and produced short and long-term scaling exponents (i.e., α(Short), α(Long)) with greater reliability. The fractal-like properties of COP fluctuations were time-scale dependent and highly complex (i.e., α(Short) values were close to one) over relatively short time scales. As compared to younger adults, older adults demonstrated lower short-term COP complexity (i.e., greater α(Short) values) in both visual conditions (p>0.001). Closing the eyes decreased short-term COP complexity, yet this decrease was greater in older compared to younger adults (p<0.001). In older adults, those with higher short-term COP complexity exhibited better adaptive capacity as quantified by Romberg test performance (r(2) = 0.38, p<0.001). These results indicate that an age-related loss of COP complexity of magnitude series may reflect a clinically important reduction in postural control system functionality as a new biomarker.
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Affiliation(s)
- Junhong Zhou
- Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China
| | - Brad Manor
- Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China
- Divisions of Gerontology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, United States of America
| | - Dongdong Liu
- College of Engineering, Peking University, Beijing, China
| | - Kun Hu
- Medical Biodynamics Program, Division of Sleep Medicine, Brigham and Women’s Hospital/Harvard Medical School, Boston, Massachusetts, United States of America
- Center for Dynamical Biomarkers and Translational Medicine, National Central University, Chungli, Taiwan
| | - Jue Zhang
- Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China
- College of Engineering, Peking University, Beijing, China
| | - Jing Fang
- Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China
- College of Engineering, Peking University, Beijing, China
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47
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Abstract
The detection and quantification of long-range correlations in time series is a fundamental tool to characterize the properties of different dynamical systems, and is applied in many different fields, including physics, biology or engineering. Due to the diversity of applications, many techniques for measuring correlations have been designed. Here, we study systematically the influence of the length of a time series on the results obtained from several techniques commonly used to detect and quantify long-range correlations: the autocorrelation analysis, Hurst's analysis, and detrended fluctuation analysis (DFA). Using the Fourier filtering method, we generate artificial time series with known and controlled long-range correlations and with a broad range of lengths, and apply on them the different correlation measures we have studied. Our results indicate that while the DFA method is practically unaffected by the length of the time series, and almost always provides accurate results, the results from Hurst's analysis and the autocorrelation analysis strongly depend on the length of the time series.
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Affiliation(s)
- Ana V Coronado
- Departamento de Física Aplicada II, E.T.S.I. de Telecomunicación, Universidad de Málaga, 29071 Málaga, Spain
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Shao YH, Gu GF, Jiang ZQ, Zhou WX, Sornette D. Comparing the performance of FA, DFA and DMA using different synthetic long-range correlated time series. Sci Rep 2012; 2:835. [PMID: 23150785 PMCID: PMC3495288 DOI: 10.1038/srep00835] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2012] [Accepted: 10/11/2012] [Indexed: 11/09/2022] Open
Abstract
Notwithstanding the significant efforts to develop estimators of long-range correlations (LRC) and to compare their performance, no clear consensus exists on what is the best method and under which conditions. In addition, synthetic tests suggest that the performance of LRC estimators varies when using different generators of LRC time series. Here, we compare the performances of four estimators [Fluctuation Analysis (FA), Detrended Fluctuation Analysis (DFA), Backward Detrending Moving Average (BDMA), and Centred Detrending Moving Average (CDMA)]. We use three different generators [Fractional Gaussian Noises, and two ways of generating Fractional Brownian Motions]. We find that CDMA has the best performance and DFA is only slightly worse in some situations, while FA performs the worst. In addition, CDMA and DFA are less sensitive to the scaling range than FA. Hence, CDMA and DFA remain "The Methods of Choice" in determining the Hurst index of time series.
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Affiliation(s)
- Ying-Hui Shao
- School of Business, East China University of Science and Technology, Shanghai 200237, China
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Zheng Z, Yamasaki K, Tenenbaum J, Podobnik B, Tamura Y, Stanley HE. Scaling of seismic memory with earthquake size. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 86:011107. [PMID: 23005368 DOI: 10.1103/physreve.86.011107] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2011] [Indexed: 06/01/2023]
Abstract
It has been observed that discrete earthquake events possess memory, i.e., that events occurring in a particular location are dependent on the history of that location. We conduct an analysis to see whether continuous real-time data also display a similar memory and, if so, whether such autocorrelations depend on the size of earthquakes within close spatiotemporal proximity. We analyze the seismic wave form database recorded by 64 stations in Japan, including the 2011 "Great East Japan Earthquake," one of the five most powerful earthquakes ever recorded, which resulted in a tsunami and devastating nuclear accidents. We explore the question of seismic memory through use of mean conditional intervals and detrended fluctuation analysis (DFA). We find that the wave form sign series show power-law anticorrelations while the interval series show power-law correlations. We find size dependence in earthquake autocorrelations: as the earthquake size increases, both of these correlation behaviors strengthen. We also find that the DFA scaling exponent α has no dependence on the earthquake hypocenter depth or epicentral distance.
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Affiliation(s)
- Zeyu Zheng
- Department of Environmental Sciences, Tokyo University of Information Sciences, Chiba 265-8501, Japan
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Bernaola-Galván P, Oliver J, Hackenberg M, Coronado A, Ivanov P, Carpena P. Segmentation of time series with long-range fractal correlations. THE EUROPEAN PHYSICAL JOURNAL. B 2012; 85:211. [PMID: 23645997 PMCID: PMC3643524 DOI: 10.1140/epjb/e2012-20969-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Segmentation is a standard method of data analysis to identify change-points dividing a nonstationary time series into homogeneous segments. However, for long-range fractal correlated series, most of the segmentation techniques detect spurious change-points which are simply due to the heterogeneities induced by the correlations and not to real nonstationarities. To avoid this oversegmentation, we present a segmentation algorithm which takes as a reference for homogeneity, instead of a random i.i.d. series, a correlated series modeled by a fractional noise with the same degree of correlations as the series to be segmented. We apply our algorithm to artificial series with long-range correlations and show that it systematically detects only the change-points produced by real nonstationarities and not those created by the correlations of the signal. Further, we apply the method to the sequence of the long arm of human chromosome 21, which is known to have long-range fractal correlations. We obtain only three segments that clearly correspond to the three regions of different G + C composition revealed by means of a multi-scale wavelet plot. Similar results have been obtained when segmenting all human chromosome sequences, showing the existence of previously unknown huge compositional superstructures in the human genome.
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Affiliation(s)
| | - J.L. Oliver
- Dpto. de Genética, Inst. de Biotecnología, Universidad de Granada, 18071 Granada, Spain
| | - M. Hackenberg
- Dpto. de Genética, Inst. de Biotecnología, Universidad de Granada, 18071 Granada, Spain
| | - A.V. Coronado
- Dpto. de Física Aplicada II, Universidad de Málaga, 29071 Málaga, Spain
| | - P.Ch. Ivanov
- Harvard Medical School, Division of Sleep Medicine, Brigham & Women’s Hospital, 02115 Boston, MA, USA
- Department of Physics and Center for Polymer Studies, Boston University, 2215 Boston, MA, USA
- Institute of Solid State Physics, Bulgarian Academy of Sciences, 1784 Sofia, Bulgaria
| | - P. Carpena
- Dpto. de Física Aplicada II, Universidad de Málaga, 29071 Málaga, Spain
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