1
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Chen DD, Wang XR, Nan JF. Hierarchical reconstruction of three-dimensional porous media from a single two-dimensional image with multiscale entropy statistics. J Microsc 2025. [PMID: 40329568 DOI: 10.1111/jmi.13418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2025] [Revised: 04/01/2025] [Accepted: 04/22/2025] [Indexed: 05/08/2025]
Abstract
Despite the development of 3D imaging technology, the reconstruction of three-dimensional (3D) microstructure from a single two-dimensional (2D) image is still a prominent problem. In this paper, we propose a hierarchical reconstruction method based on simulated annealing, which is named hierarchical simulated annealing method (HSA), with the multiscale entropy statistics as the morphological information descriptor to reconstruct its corresponding three-dimensional (3D) microstructure from a single two-dimensional (2D) image. Both hierarchical simulated annealing (HSA) method and simulated annealing (SA) method are used to perform on the 2D and 3D microstructure reconstruction from a single 2D image, where the two-point cluster function and the standard two-point correlation function are used as the measurement metrics for the reconstructed 2D and 3D structures. From the 2D reconstructions, it can be seen that all the reconstructions of HSA method and SA method not only captures the similar morphological information with the original images, but also have a good agreement with the target microstructures in two-point cluster function. For the reconstructed 3D microstructures, the comparison of two-point correlation function shows that both HSA method and SA method can effectively reconstruct its 3D microstructure and the comparison of the reconstruction time between HSA method and SA method shows that the reconstruction speed of HSA method is an order of magnitude faster than that of SA method.
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Affiliation(s)
- Dong Dong Chen
- School of Electronics and Information, Zhengzhou University of Light Industry, Zhengzhou, China
| | - Xiao Rui Wang
- School of Electronics and Information, Zhengzhou University of Light Industry, Zhengzhou, China
| | - Jiao Fen Nan
- School of Electronics and Information, Zhengzhou University of Light Industry, Zhengzhou, China
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2
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Amiri H, Vasconcelos I, Jiao Y, Chen PE, Plümper O. Quantifying microstructures of earth materials using higher-order spatial correlations and deep generative adversarial networks. Sci Rep 2023; 13:1805. [PMID: 36720975 PMCID: PMC9889385 DOI: 10.1038/s41598-023-28970-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Accepted: 01/27/2023] [Indexed: 02/02/2023] Open
Abstract
The key to most subsurface processes is to determine how structural and topological features at small length scales, i.e., the microstructure, control the effective and macroscopic properties of earth materials. Recent progress in imaging technology has enabled us to visualise and characterise microstructures at different length scales and dimensions. However, one limitation of these technologies is the trade-off between resolution and sample size (or representativeness). A promising approach to this problem is image reconstruction which aims to generate statistically equivalent microstructures but at a larger scale and/or additional dimension. In this work, a stochastic method and three generative adversarial networks (GANs), namely deep convolutional GAN (DCGAN), Wasserstein GAN with gradient penalty (WGAN-GP), and StyleGAN2 with adaptive discriminator augmentation (ADA), are used to reconstruct two-dimensional images of two hydrothermally rocks with varying degrees of complexity. For the first time, we evaluate and compare the performance of these methods using multi-point spatial correlation functions-known as statistical microstructural descriptors (SMDs)-ultimately used as external tools to the loss functions. Our findings suggest that a well-trained GAN can reconstruct higher-order, spatially-correlated patterns of complex earth materials, capturing underlying structural and morphological properties. Comparing our results with a stochastic reconstruction method based on a two-point correlation function, we show the importance of coupling training/assessment of GANs with higher-order SMDs, especially in the case of complex microstructures. More importantly, by quantifying original and reconstructed microstructures via different GANs, we highlight the interpretability of these SMDs and show how they can provide valuable insights into the spatial patterns in the synthetic images, allowing us to detect common artefacts and failure cases in training GANs.
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Affiliation(s)
- Hamed Amiri
- Department of Earth Sciences, Utrecht University, Utrecht, The Netherlands.
| | - Ivan Vasconcelos
- Department of Earth Sciences, Utrecht University, Utrecht, The Netherlands
| | - Yang Jiao
- Materials Science and Engineering, Arizona State University, Tempe, USA
| | - Pei-En Chen
- Mechanical and Aerospace Engineering, Arizona State University, Tempe, USA
| | - Oliver Plümper
- Department of Earth Sciences, Utrecht University, Utrecht, The Netherlands
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3
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Wang H, Torquato S. Equilibrium states corresponding to targeted hyperuniform nonequilibrium pair statistics. SOFT MATTER 2023; 19:550-564. [PMID: 36546870 DOI: 10.1039/d2sm01294d] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
The Zhang-Torquato conjecture [G. Zhang and S. Torquato, Phys. Rev. E, 2020, 101, 032124.] states that any realizable pair correlation function g2(r) or structure factor S(k) of a translationally invariant nonequilibrium system can be attained by an equilibrium ensemble involving only (up to) effective two-body interactions. To further test and study this conjecture, we consider two singular nonequilibrium models of recent interest that also have the exotic hyperuniformity property: a 2D "perfect glass" and a 3D critical absorbing-state model. We find that each nonequilibrium target can be achieved accurately by equilibrium states with effective one- and two-body potentials, lending further support to the conjecture. To characterize the structural degeneracy of such a nonequilibrium-equilibrium correspondence, we compute higher-order statistics for both models, as well as those for a hyperuniform 3D uniformly randomized lattice (URL), whose higher-order statistics can be very precisely ascertained. Interestingly, we find that the differences in the higher-order statistics between nonequilibrium and equilibrium systems with matching pair statistics, as measured by the "hole" probability distribution, provide measures of the degree to which a system is out of equilibrium. We show that all three systems studied possess the bounded-hole property and that holes near the maximum hole size in the URL are much rarer than those in the underlying simple cubic lattice. Remarkably, upon quenching, the effective potentials for all three systems possess local energy minima (i.e., inherent structures) with stronger forms of hyperuniformity compared to their target counterparts. Our methods are expected to facilitate the self-assembly of tunable hyperuniform soft-matter systems.
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Affiliation(s)
- Haina Wang
- Department of Chemistry, Princeton University, Princeton, New Jersey, 08544, USA
| | - Salvatore Torquato
- Department of Chemistry, Department of Physics, Princeton Center for Theoretical Science, Princeton Institute of Materials, and Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey, 08544, USA
- School of Natural Sciences, Institute for Advanced Study, 1 Einstein Drive, Princeton, NJ 08540, USA.
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4
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Torquato S, Wang H. Precise determination of pair interactions from pair statistics of many-body systems in and out of equilibrium. Phys Rev E 2022; 106:044122. [PMID: 36397532 DOI: 10.1103/physreve.106.044122] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 09/22/2022] [Indexed: 06/16/2023]
Abstract
The determination of the pair potential v(r) that accurately yields an equilibrium state at positive temperature T with a prescribed pair correlation function g_{2}(r) or corresponding structure factor S(k) in d-dimensional Euclidean space R^{d} is an outstanding inverse statistical mechanics problem with far-reaching implications. Recently, Zhang and Torquato [Phys. Rev. E 101, 032124 (2020)2470-004510.1103/PhysRevE.101.032124] conjectured that any realizable g_{2}(r) or S(k) corresponding to a translationally invariant nonequilibrium system can be attained by a classical equilibrium ensemble involving only (up to) effective pair interactions. Testing this conjecture for nonequilibrium systems as well as for nontrivial equilibrium states requires improved inverse methodologies. We have devised an optimization algorithm to precisely determine effective pair potentials that correspond to pair statistics of general translationally invariant disordered many-body equilibrium or nonequilibrium systems at positive temperatures. This methodology utilizes a parameterized family of pointwise basis functions for the potential function whose initial form is informed by small-, intermediate- and large-distance behaviors dictated by statistical-mechanical theory. Subsequently, a nonlinear optimization technique is utilized to minimize an objective function that incorporates both the target pair correlation function g_{2}(r) and structure factor S(k) so that the small intermediate- and large-distance correlations are very accurately captured. To illustrate the versatility and power of our methodology, we accurately determine the effective pair interactions of the following four diverse target systems: (1) Lennard-Jones system in the vicinity of its critical point, (2) liquid under the Dzugutov potential, (3) nonequilibrium random sequential addition packing, and (4) a nonequilibrium hyperuniform "cloaked" uniformly randomized lattice. We found that the optimized pair potentials generate corresponding pair statistics that accurately match their corresponding targets with total L_{2}-norm errors that are an order of magnitude smaller than that of previous methods. The results of our investigation lend further support to the Zhang-Torquato conjecture. Furthermore, our algorithm will enable one to probe systems with identical pair statistics but different higher-body statistics, which will shed light on the well-known degeneracy problem of statistical mechanics.
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Affiliation(s)
- Salvatore Torquato
- Department of Chemistry, Department of Physics, Princeton Institute of Materials, and Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey 08544, USA
- School of Natural Sciences, Institute for Advanced Study, 1 Einstein Drive, Princeton, New Jersey 08540, USA
| | - Haina Wang
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
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5
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Chen D, Xu Z, Wang X, He H, Du Z, Nan J. Fast reconstruction of multiphase microstructures based on statistical descriptors. Phys Rev E 2022; 105:055301. [PMID: 35706263 DOI: 10.1103/physreve.105.055301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Accepted: 04/06/2022] [Indexed: 06/15/2023]
Abstract
In this paper, we propose a hierarchical simulated annealing of erosion method (HSAE) to improve the computational efficiency of multiphase microstructure reconstruction, whose computational efficiency can be improved by an order of magnitude. Reconstruction of the two-dimensional (2D) and three-dimensional (3D) multiphase microstructures (pore, grain, and clay) based on simulated annealing (SA) and HSAE are performed. In the reconstruction of multiphase microstructure with HSAE and SA, three independent two-point correlation functions are chosen as the morphological information descriptors. The two-point cluster function which contains significant high-order statistical information is used to verify the reconstruction results. From the analysis of 2D reconstruction, it can find that the proposed HSAE technique not only improves the quality of reconstruction, but also improves the computational efficiency. The reconstructions of our proposed method are still imperfect. This is because the used two-point correlation functions contain insufficient information. For the 3D reconstruction, the two-point correlation functions of the 3D generation are in excellent agreement with those of the original 2D image, which illustrates that our proposed method is effective for the reconstruction of 3D microstructure. The comparison of the energy vs computational time between the SA and HSAE methods shows that our presented method is an order of magnitude faster than the SA method. That is because only some of the pixels in the overall hierarchy need to be considered for sampling.
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Affiliation(s)
- DongDong Chen
- School of Computer and Communication Engineering, Zhengzhou University of Light Industry, Zhengzhou, 450000, China
| | - Zhi Xu
- Guangxi Key Laboratory of Images and Graphics Intelligent Processing, Guilin University of Electronics Technology, Guilin, 541004, China
| | - XiaoRui Wang
- School of Computer and Communication Engineering, Zhengzhou University of Light Industry, Zhengzhou, 450000, China
| | - HongJie He
- School of Computer and Communication Engineering, Zhengzhou University of Light Industry, Zhengzhou, 450000, China
| | - ZhongZhou Du
- School of Computer and Communication Engineering, Zhengzhou University of Light Industry, Zhengzhou, 450000, China
| | - JiaoFen Nan
- School of Computer and Communication Engineering, Zhengzhou University of Light Industry, Zhengzhou, 450000, China
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6
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Huang Y, Xiang Z, Qian M. Deep-learning-based porous media microstructure quantitative characterization and reconstruction method. Phys Rev E 2022; 105:015308. [PMID: 35193256 DOI: 10.1103/physreve.105.015308] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2021] [Accepted: 12/29/2021] [Indexed: 06/14/2023]
Abstract
Microstructure characterization and reconstruction (MCR) is one of the most important components of discovering processing-structure-property relations of porous media behavior and inverse porous media design in computational materials science. Since the algorithms for describing and controlling the geometric configuration of microstructures need to solve a large number of variables and involve multiobjective conditions, the existing MCR methods have difficulty in gaining a perfect trade-off among the quantitative generation and characterization capability and the reconstruction quality. In this work, an improved 3D Porous Media Microstructure (3DPmmGAN) generative adversarial network based on deep-learning algorithm is demonstrated for high-quality microstructures generation with high controllability and high prediction accuracy. The proposed 3DPmmGAN allows the model to utilize unlabeled data for complex high-randomness microstructures end-to-end training within an acceptable time consumption. Further analysis shows that the trained network has good adaptivity for microstructures with different random geometric configurations, and can quantitatively control the generated structure according to semantic conditions, and can also quantitatively predict complex microstructure features. The key results suggest the proposed 3DPmmGAN is a powerful tool to accelerate the preparation and the initial characterization of 3D porous media, and potentially maximize the design efficiency for porous media.
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Affiliation(s)
- Yubo Huang
- Faculty of Mechanical Engineering and Automation, Zhejiang Sci-Tech University, Hangzhou 310018, China
| | - Zhong Xiang
- Faculty of Mechanical Engineering and Automation, Zhejiang Sci-Tech University, Hangzhou 310018, China
| | - Miao Qian
- Faculty of Mechanical Engineering and Automation, Zhejiang Sci-Tech University, Hangzhou 310018, China
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7
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Fernández M, Fritzen F. On the generation of periodic discrete structures with identical two-point correlation. Proc Math Phys Eng Sci 2020; 476:20200568. [PMID: 33223951 PMCID: PMC7655758 DOI: 10.1098/rspa.2020.0568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Accepted: 09/15/2020] [Indexed: 11/12/2022] Open
Abstract
Strategies for the generation of periodic discrete structures with identical two-point correlation-called 2PC-equivalent-are developed. It is shown that starting from a set of 2PC-equivalent root structures, 2PC-equivalent child structures of arbitrary resolution and number of phases (e.g. material phases) can be generated based on phase extension through trivial embeddings, kernel-based extension and phase coalescence. Proofs are provided by means of discrete Fourier transform theory. A Python 3 implementation is offered for reproduction of examples and future applications.
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Affiliation(s)
- M. Fernández
- Data Analytics in Engineering, Stuttgart Center for Simulation Science, Institute of Applied Mechanics (CE), University of Stuttgart, Pfaffenwaldring 7, 70569 Stuttgart, Germany
- Cyber-Physical Simulation Group, Department of Mechanical Engineering, Technical University of Darmstadt, Dolivostr. 15, 64293 Darmstadt, Germany
| | - F. Fritzen
- Data Analytics in Engineering, Stuttgart Center for Simulation Science, Institute of Applied Mechanics (CE), University of Stuttgart, Pfaffenwaldring 7, 70569 Stuttgart, Germany
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8
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Wang H, Stillinger FH, Torquato S. Sensitivity of pair statistics on pair potentials in many-body systems. J Chem Phys 2020; 153:124106. [PMID: 33003740 DOI: 10.1063/5.0021475] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We study the sensitivity and practicality of Henderson's theorem in classical statistical mechanics, which states that the pair potential v(r) that gives rise to a given pair correlation function g2(r) [or equivalently, the structure factor S(k)] in a classical many-body system at number density ρ and temperature T is unique up to an additive constant. While widely invoked in inverse-problem studies, the utility of the theorem has not been quantitatively scrutinized to any large degree. We show that Henderson's theorem has practical shortcomings for disordered and ordered phases for certain densities and temperatures. Using proposed sensitivity metrics, we identify illustrative cases in which distinctly different potential functions give very similar pair correlation functions and/or structure factors up to their corresponding correlation lengths. Our results reveal that due to a limited range and precision of pair information in either direct or reciprocal space, there is effective ambiguity of solutions to inverse problems that utilize pair information only, and more caution must be exercised when one claims the uniqueness of any resulting effective pair potential found in practice. We have also identified systems that possess virtually identical pair statistics but have distinctly different higher-order correlations. Such differences should be reflected in their individually distinct dynamics (e.g., glassy behaviors). Finally, we prove a more general version of Henderson's theorem that extends the uniqueness statement to include potentials that involve two- and higher-body interactions.
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Affiliation(s)
- Haina Wang
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Frank H Stillinger
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Salvatore Torquato
- Department of Chemistry, Department of Physics, Princeton Center for Theoretical Science, Princeton Institute for the Science and Technology of Materials, and Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey 08544, USA
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9
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Chen PE, Xu W, Ren Y, Jiao Y. Probing information content of hierarchical n-point polytope functions for quantifying and reconstructing disordered systems. Phys Rev E 2020; 102:013305. [PMID: 32794921 DOI: 10.1103/physreve.102.013305] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Accepted: 06/16/2020] [Indexed: 11/07/2022]
Abstract
Disordered systems are ubiquitous in physical, biological, and material sciences. Examples include liquid and glassy states of condensed matter, colloids, granular materials, porous media, composites, alloys, packings of cells in avian retina, and tumor spheroids, to name but a few. A comprehensive understanding of such disordered systems requires, as the first step, systematic quantification, modeling, and representation of the underlying complex configurations and microstructure, which is generally very challenging to achieve. Recently, we introduced a set of hierarchical statistical microstructural descriptors, i.e., the "n-point polytope functions" P_{n}, which are derived from the standard n-point correlation functions S_{n}, and successively included higher-order n-point statistics of the morphological features of interest in a concise, explainable, and expressive manner. Here we investigate the information content of the P_{n} functions via optimization-based realization rendering. This is achieved by successively incorporating higher-order P_{n} functions up to n=8 and quantitatively assessing the accuracy of the reconstructed systems via unconstrained statistical morphological descriptors (e.g., the lineal-path function). We examine a wide spectrum of representative random systems with distinct geometrical and topological features. We find that, generally, successively incorporating higher-order P_{n} functions and, thus, the higher-order morphological information encoded in these descriptors leads to superior accuracy of the reconstructions. However, incorporating more P_{n} functions into the reconstruction also significantly increases the complexity and roughness of the associated energy landscape for the underlying stochastic optimization, making it difficult to convergence numerically.
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Affiliation(s)
- Pei-En Chen
- Department of Mechanical Engineering, Arizona State University, Tempe, Arizona 85287, USA
| | - Wenxiang Xu
- College of Mechanics and Materials, Hohai University, Nanjing 211100, People's Republic of China
| | - Yi Ren
- Department of Mechanical Engineering, Arizona State University, Tempe, Arizona 85287, USA
| | - Yang Jiao
- Department of Materials Science and Engineering, Arizona State University, Tempe, Arizona 85287, USA.,Department of Physics, Arizona State University, Tempe, Arizona 85287, USA
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10
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Park S, Lim S, Siriviriyakul P, Jeon JS. Three-dimensional pore network characterization of reconstructed extracellular matrix. Phys Rev E 2020; 101:052414. [PMID: 32575345 DOI: 10.1103/physreve.101.052414] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2019] [Accepted: 04/26/2020] [Indexed: 06/11/2023]
Abstract
The extracellular matrix (ECM) has a fiber network that provides physical scaffolds to cells and plays important roles by regulating cellular functions. Some previous works characterized the mechanical and geometrical properties of the ECM fiber network using reconstituted collagen-I. However, the characterization of the porous structure of reconstituted collagen-I has been limited to the pore diameter measurement, and pore network extraction has not been applied to reconstituted collagen-I despite the importance of pore interconnectivity. Here, we aim to show the importance of characterizing the pore network of reconstituted collagen-I by comparing the pore networks of structures that have different fiber alignments. We show that the fiber alignment significantly changes the pore throat area but not the pore diameter. Also, we demonstrate that larger pore throats are directed in the direction of the fiber alignment, which may help in understanding the enhanced cell migration when fibers are aligned.
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Affiliation(s)
- Seongjin Park
- Mechanical Engineering, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea
| | - Seongjin Lim
- Mechanical Engineering, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea
| | - Pan Siriviriyakul
- Mechanical Engineering, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea
| | - Jessie S Jeon
- Mechanical Engineering, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea
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11
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Zhang G, Torquato S. Realizable hyperuniform and nonhyperuniform particle configurations with targeted spectral functions via effective pair interactions. Phys Rev E 2020; 101:032124. [PMID: 32289971 DOI: 10.1103/physreve.101.032124] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2020] [Accepted: 02/24/2020] [Indexed: 11/07/2022]
Abstract
The capacity to identify realizable many-body configurations associated with targeted functional forms for the pair correlation function g_{2}(r) or its corresponding structure factor S(k) is of great fundamental and practical importance. While there are obvious necessary conditions that a prescribed structure factor at number density ρ must satisfy to be configurationally realizable, sufficient conditions are generally not known due to the infinite degeneracy of configurations with different higher-order correlation functions. A major aim of this paper is to expand our theoretical knowledge of the class of pair correlation functions or structure factors that are realizable by classical disordered ensembles of particle configurations, including exotic "hyperuniform" varieties. We first introduce a theoretical formalism that provides a means to draw classical particle configurations from canonical ensembles with certain pairwise-additive potentials that could correspond to targeted analytical functional forms for the structure factor. This formulation enables us to devise an improved algorithm to construct systematically canonical-ensemble particle configurations with such targeted pair statistics, whenever realizable. As a proof of concept, we test the algorithm by targeting several different structure factors across dimensions that are known to be realizable and one hyperuniform target that is known to be nontrivially unrealizable. Our algorithm succeeds for all realizable targets and appropriately fails for the unrealizable target, demonstrating the accuracy and power of the method to numerically investigate the realizability problem. Subsequently, we also target several families of structure-factor functions that meet the known necessary realizability conditions but are not known to be realizable by disordered hyperuniform point configurations, including d-dimensional Gaussian structure factors, d-dimensional generalizations of the two-dimensional one-component plasma (OCP), and the d-dimensional Fourier duals of the previous OCP cases. Moreover, we also explore unusual nonhyperuniform targets, including "hyposurficial" and "antihyperuniform" examples. In all of these instances, the targeted structure factors are achieved with high accuracy, suggesting that they are indeed realizable by equilibrium configurations with pairwise interactions at positive temperatures. Remarkably, we also show that the structure factor of nonequilibrium perfect glass, specified by two-, three-, and four-body interactions, can also be realized by equilibrium pair interactions at positive temperatures. Our findings lead us to the conjecture that any realizable structure factor corresponding to either a translationally invariant equilibrium or nonequilibrium system can be attained by an equilibrium ensemble involving only effective pair interactions. Our investigation not only broadens our knowledge of analytical functional forms for g_{2}(r) and S(k) associated with disordered point configurations across dimensions but also deepens our understanding of many-body physics. Moreover, our work can be applied to the design of materials with desirable physical properties that can be tuned by their pair statistics.
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Affiliation(s)
- Ge Zhang
- Department of Physics and Astronomy, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Salvatore Torquato
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA; Department of Physics, Princeton University, Princeton, New Jersey 08544, USA; Princeton Institute for the Science and Technology of Materials, Princeton University, Princeton, New Jersey 08544, USA; and Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey 08544, USA
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12
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Stillinger FH, Torquato S. Structural degeneracy in pair distance distributions. J Chem Phys 2019; 150:204125. [DOI: 10.1063/1.5096894] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Frank H. Stillinger
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Salvatore Torquato
- Department of Chemistry, Department of Physics, Princeton Institute for the Science and Technology of Materials, and Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey 08544, USA
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13
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Lubbers N, Lookman T, Barros K. Inferring low-dimensional microstructure representations using convolutional neural networks. Phys Rev E 2017; 96:052111. [PMID: 29347716 DOI: 10.1103/physreve.96.052111] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Indexed: 11/07/2022]
Abstract
We apply recent advances in machine learning and computer vision to a central problem in materials informatics: the statistical representation of microstructural images. We use activations in a pretrained convolutional neural network to provide a high-dimensional characterization of a set of synthetic microstructural images. Next, we use manifold learning to obtain a low-dimensional embedding of this statistical characterization. We show that the low-dimensional embedding extracts the parameters used to generate the images. According to a variety of metrics, the convolutional neural network method yields dramatically better embeddings than the analogous method derived from two-point correlations alone.
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Affiliation(s)
- Nicholas Lubbers
- Department of Physics, Boston University, Boston, Massachusetts 02215, USA.,Theoretical Division and CNLS, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - Turab Lookman
- Theoretical Division and CNLS, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - Kipton Barros
- Theoretical Division and CNLS, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
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14
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Gujarathi SR, Farrow CL, Glosser C, Granlund L, Duxbury PM. Ab-initio reconstruction of complex Euclidean networks in two dimensions. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 89:053311. [PMID: 25353918 DOI: 10.1103/physreve.89.053311] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2013] [Indexed: 06/04/2023]
Abstract
Reconstruction of complex structures is an inverse problem arising in virtually all areas of science and technology, from protein structure determination to bulk heterostructure solar cells and the structure of nanoparticles. We cast this problem as a complex network problem where the edges in a network have weights equal to the Euclidean distance between their endpoints. We present a method for reconstruction of the locations of the nodes of the network given only the edge weights of the Euclidean network. The theoretical foundations of the method are based on rigidity theory, which enables derivation of a polynomial bound on its efficiency. An efficient implementation of the method is discussed and timing results indicate that the run time of the algorithm is polynomial in the number of nodes in the network. We have reconstructed Euclidean networks of about 1000 nodes in approximately 24 h on a desktop computer using this implementation. We also reconstruct Euclidean networks corresponding to polymer chains in two dimensions and planar graphene nanoparticles. We have also modified our base algorithm so that it can successfully solve random point sets when the input data are less precise.
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Affiliation(s)
- S R Gujarathi
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | - C L Farrow
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | - C Glosser
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | - L Granlund
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
| | - P M Duxbury
- Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, USA
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15
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Chen D, Teng Q, He X, Xu Z, Li Z. Stable-phase method for hierarchical annealing in the reconstruction of porous media images. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 89:013305. [PMID: 24580358 DOI: 10.1103/physreve.89.013305] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2013] [Indexed: 06/03/2023]
Abstract
In this paper, we introduce a stable-phase approach for hierarchical annealing which addresses the very large computational costs associated with simulated annealing for the reconstruction of large-scale binary porous media images. Our presented method, which uses the two-point correlation function as the morphological descriptor, involves the reconstruction of three-phase and two-phase structures. We consider reconstructing the three-phase structures based on standard annealing and the two-phase structures based on standard and hierarchical annealings. From the result of the two-dimensional (2D) reconstruction, we find that the 2D generation does not fully capture the morphological information of the original image, even though the two-point correlation function of the reconstruction is in excellent agreement with that of the reference image. For the reconstructed three-dimensional (3D) microstructure, we calculate its permeability and compare it to that of the reference 3D microstructure. The result indicates that the reconstructed structure has a lower degree of connectedness than that of the actual sandstone. We also compare the computation time of our presented method to that of the standard annealing, which shows that our presented method of orders of magnitude improves the convergence rate. That is because only a small part of the pixels in the overall hierarchy need to be considered for sampling by the annealer.
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Affiliation(s)
- Dongdong Chen
- College of Electronics and Information Engineering, Sichuan University, Chengdu 610065, China
| | - Qizhi Teng
- College of Electronics and Information Engineering, Sichuan University, Chengdu 610065, China
| | - Xiaohai He
- College of Electronics and Information Engineering, Sichuan University, Chengdu 610065, China
| | - Zhi Xu
- College of Electronics and Information Engineering, Sichuan University, Chengdu 610065, China
| | - Zhengji Li
- College of Electronics and Information Engineering, Sichuan University, Chengdu 610065, China
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16
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Zhang G, Stillinger FH, Torquato S. Probing the limitations of isotropic pair potentials to produce ground-state structural extremes via inverse statistical mechanics. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:042309. [PMID: 24229174 DOI: 10.1103/physreve.88.042309] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2013] [Indexed: 06/02/2023]
Abstract
Inverse statistical-mechanical methods have recently been employed to design optimized short-range radial (isotropic) pair potentials that robustly produce novel targeted classical ground-state many-particle configurations. The target structures considered in those studies were low-coordinated crystals with a high degree of symmetry. In this paper, we further test the fundamental limitations of radial pair potentials by targeting crystal structures with appreciably less symmetry, including those in which the particles have different local structural environments. These challenging target configurations demanded that we modify previous inverse optimization techniques. In particular, we first find local minima of a candidate enthalpy surface and determine the enthalpy difference ΔH between such inherent structures and the target structure. Then we determine the lowest positive eigenvalue λ(0) of the Hessian matrix of the enthalpy surface at the target configuration. Finally, we maximize λ(0)ΔH so that the target structure is both locally stable and globally stable with respect to the inherent structures. Using this modified optimization technique, we have designed short-range radial pair potentials that stabilize the two-dimensional kagome crystal, the rectangular kagome crystal, and rectangular lattices, as well as the three-dimensional structure of the CaF(2) crystal inhabited by a single-particle species. We verify our results by cooling liquid configurations to absolute zero temperature via simulated annealing and ensuring that such states have stable phonon spectra. Except for the rectangular kagome structure, all of the target structures can be stabilized with monotonic repulsive potentials. Our work demonstrates that single-component systems with short-range radial pair potentials can counterintuitively self-assemble into crystal ground states with low symmetry and different local structural environments. Finally, we present general principles that offer guidance in determining whether certain target structures can be achieved as ground states by radial pair potentials.
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Affiliation(s)
- G Zhang
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
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17
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Derossi A, De Pilli T, Severini C. Statistical Description of Food Microstructure. Extraction of Some Correlation Functions From 2D Images. FOOD BIOPHYS 2013. [DOI: 10.1007/s11483-013-9307-2] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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18
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Rohrmann RD, Zurbriggen E. Conditional pair distributions in many-body systems: exact results for Poisson ensembles. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 85:051109. [PMID: 23004705 DOI: 10.1103/physreve.85.051109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2011] [Revised: 02/03/2012] [Indexed: 06/01/2023]
Abstract
We introduce a conditional pair distribution function (CPDF) which characterizes the probability density of finding an object (e.g., a particle in a fluid) to within a certain distance of each other, with each of these two having a nearest neighbor to a fixed but otherwise arbitrary distance. This function describes special four-body configurations, but also contains contributions due to the so-called mutual nearest neighbor (two-body) and shared neighbor (three-body) configurations. The CPDF is introduced to improve a Helmholtz free energy method based on space partitions. We derive exact expressions of the CPDF and various associated quantities for randomly distributed, noninteracting points at Euclidean spaces of one, two, and three dimensions. Results may be of interest in many diverse scientific fields, from fluid physics to social and biological sciences.
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Affiliation(s)
- René D Rohrmann
- Instituto de Ciencias Astronómicas, de la Tierra y del Espacio, UNSJ-CONICET, Av. España 1512 Sur, 5400 San Juan, Argentina.
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19
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Gommes CJ, Jiao Y, Torquato S. Microstructural degeneracy associated with a two-point correlation function and its information content. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 85:051140. [PMID: 23004736 DOI: 10.1103/physreve.85.051140] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2012] [Indexed: 06/01/2023]
Abstract
A two-point correlation function provides a crucial yet an incomplete characterization of a microstructure because distinctly different microstructures may have the same correlation function. In an earlier Letter [Gommes, Jiao, and Torquato, Phys. Rev. Lett. 108, 080601 (2012)], we addressed the microstructural degeneracy question: What is the number of microstructures compatible with a specified correlation function? We computed this degeneracy, i.e., configurational entropy, in the framework of reconstruction methods, which enabled us to map the problem to the determination of ground-state degeneracies. Here, we provide a more comprehensive presentation of the methodology and analyses, as well as additional results. Since the configuration space of a reconstruction problem is a hypercube on which a Hamming distance is defined, we can calculate analytically the energy profile of any reconstruction problem, corresponding to the average energy of all microstructures at a given Hamming distance from a ground state. The steepness of the energy profile is a measure of the roughness of the energy landscape associated with the reconstruction problem, which can be used as a proxy for the ground-state degeneracy. The relationship between this roughness metric and the ground-state degeneracy is calibrated using a Monte Carlo algorithm for determining the ground-state degeneracy of a variety of microstructures, including realizations of hard disks and Poisson point processes at various densities as well as those with known degeneracies (e.g., single disks of various sizes and a particular crystalline microstructure). We show that our results can be expressed in terms of the information content of the two-point correlation functions. From this perspective, the a priori condition for a reconstruction to be accurate is that the information content, expressed in bits, should be comparable to the number of pixels in the unknown microstructure. We provide a formula to calculate the information content of any two-point correlation function, which makes our results broadly applicable to any field in which correlation functions are employed.
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Affiliation(s)
- C J Gommes
- Department of Chemical Engineering, University of Liège, Liège 4000, Belgium.
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Gommes CJ, Jiao Y, Torquato S. Density of States for a specified correlation function and the energy landscape. PHYSICAL REVIEW LETTERS 2012; 108:080601. [PMID: 22463509 DOI: 10.1103/physrevlett.108.080601] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2011] [Indexed: 05/31/2023]
Abstract
The degeneracy of two-phase disordered microstructures consistent with a specified correlation function is analyzed by mapping it to a ground-state degeneracy. We determine for the first time the associated density of states via a Monte Carlo algorithm. Our results are explained in terms of the roughness of an energy landscape, defined on a hypercubic configuration space. The use of a Hamming distance in this space enables us to define a roughness metric, which is calculated from the correlation function alone and related quantitatively to the structural degeneracy. This relation is validated for a wide variety of disordered structures.
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Affiliation(s)
- C J Gommes
- Department of Chemical Engineering, University of Liège, B-4000 Liège, Belgium.
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21
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Zachary CE, Torquato S. Improved reconstructions of random media using dilation and erosion processes. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 84:056102. [PMID: 22181468 DOI: 10.1103/physreve.84.056102] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2011] [Revised: 10/06/2011] [Indexed: 05/31/2023]
Abstract
By using the most sensitive two-point correlation functions introduced to date, we reconstruct the microstructures of two-phase random media with heretofore unattained accuracy. Such media arise in a host of contexts, including porous and composite media, ecological structures, biological media, and astrophysical structures. The aforementioned correlation functions are special cases of the so-called canonical n-point correlation function H(n) and generalize the ones that have been recently employed to advance our ability to reconstruct complex microstructures [Y. Jiao, F. H. Stillinger, and S. Torquato, Proc. Natl. Acad. Sci. 106, 17634 (2009)]. The use of these generalized correlation functions is tantamount to dilating or eroding a reference phase of the target medium and incorporating the additional topological information of the modified media, thereby providing more accurate reconstructions of percolating, filamentary, and other topologically complex microstructures. We apply our methods to a multiply connected "donut" medium and a dilute distribution of "cracks" (a set of essentially zero measure), demonstrating improved accuracy in both cases with implications for higher-dimensional and biconnected two-phase systems. The high information content of the generalized two-point correlation functions suggests that it would be profitable to explore their use to characterize the structural and physical properties of not only random media, but also molecular systems, including structural glasses.
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Affiliation(s)
- Chase E Zachary
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
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22
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Stachurski ZH. On Structure and Properties of Amorphous Materials. MATERIALS (BASEL, SWITZERLAND) 2011; 4:1564-1598. [PMID: 28824158 PMCID: PMC5448858 DOI: 10.3390/ma4091564] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/15/2011] [Revised: 08/20/2011] [Accepted: 09/06/2011] [Indexed: 11/17/2022]
Abstract
Mechanical, optical, magnetic and electronic properties of amorphous materials hold great promise towards current and emergent technologies. We distinguish at least four categories of amorphous (glassy) materials: (i) metallic; (ii) thin films; (iii) organic and inorganic thermoplastics; and (iv) amorphous permanent networks. Some fundamental questions about the atomic arrangements remain unresolved. This paper focuses on the models of atomic arrangements in amorphous materials. The earliest ideas of Bernal on the structure of liquids were followed by experiments and computer models for the packing of spheres. Modern approach is to carry out computer simulations with prediction that can be tested by experiments. A geometrical concept of an ideal amorphous solid is presented as a novel contribution to the understanding of atomic arrangements in amorphous solids.
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Affiliation(s)
- Zbigniew H Stachurski
- Research School of Engineering, College of Engineering and Information Technology, Australian National University, Ellery Crescent, Acton ACT 2601, Australia.
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23
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Zachary CE, Torquato S. Anomalous local coordination, density fluctuations, and void statistics in disordered hyperuniform many-particle ground states. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 83:051133. [PMID: 21728516 DOI: 10.1103/physreve.83.051133] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2010] [Indexed: 05/31/2023]
Abstract
We provide numerical constructions of one-dimensional hyperuniform many-particle distributions that exhibit unusual clustering and asymptotic local number density fluctuations growing more slowly than the volume of an observation window but faster than the surface area. Hyperuniformity, defined by vanishing infinite-wavelength local density fluctuations, provides a quantitative metric of global order within a many-particle configuration and signals the onset of an "inverted" critical point in which the direct correlation function becomes long ranged. By targeting a specified form of the structure factor at small wavenumbers (S(k)~k(α) for 0<α<1) using collective density variables, we are able to tailor the form of asymptotic local density fluctuations while simultaneously measuring the effect of imposing weak and strong constraints on the available degrees of freedom within the system. This procedure is equivalent to finding the (possibly disordered) classical ground state of an interacting many-particle system with up to four-body interactions. Even in one dimension, the long-range effective interactions induce clustering and nontrivial phase transitions in the resulting ground-state configurations. We provide an analytical connection between the fraction of constrained degrees of freedom within the system and the disorder-order phase transition for a class of target structure factors by examining the realizability of the constrained contribution to the pair correlation function. Our results explicitly demonstrate that disordered hyperuniform many-particle ground states, and therefore also point distributions, with substantial clustering can be constructed. We directly relate the local coordination structure of our point patterns to the distribution of the void space external to the particles, and we provide a scaling argument for the configurational entropy (analogous to spin-frustated system) of the disordered ground states. By emphasizing the intimate connection between geometrical constraints on the particle distribution and structural regularity, our work has direct implications for higher-dimensional systems, including an understanding of the appearance of hyperuniformity and quasi-long-range pair correlations in maximally random strictly jammed packings of hard spheres.
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Affiliation(s)
- Chase E Zachary
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA.
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Zachary CE, Jiao Y, Torquato S. Hyperuniformity, quasi-long-range correlations, and void-space constraints in maximally random jammed particle packings. I. Polydisperse spheres. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 83:051308. [PMID: 21728526 DOI: 10.1103/physreve.83.051308] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2011] [Revised: 03/14/2011] [Indexed: 05/31/2023]
Abstract
Hyperuniform many-particle distributions possess a local number variance that grows more slowly than the volume of an observation window, implying that the local density is effectively homogeneous beyond a few characteristic length scales. Previous work on maximally random strictly jammed sphere packings in three dimensions has shown that these systems are hyperuniform and possess unusual quasi-long-range pair correlations decaying as r(-4), resulting in anomalous logarithmic growth in the number variance. However, recent work on maximally random jammed sphere packings with a size distribution has suggested that such quasi-long-range correlations and hyperuniformity are not universal among jammed hard-particle systems. In this paper, we show that such systems are indeed hyperuniform with signature quasi-long-range correlations by characterizing the more general local-volume-fraction fluctuations. We argue that the regularity of the void space induced by the constraints of saturation and strict jamming overcomes the local inhomogeneity of the disk centers to induce hyperuniformity in the medium with a linear small-wave-number nonanalytic behavior in the spectral density, resulting in quasi-long-range spatial correlations scaling with r(-(d+1)) in d Euclidean space dimensions. A numerical and analytical analysis of the pore-size distribution for a binary maximally random jammed system in addition to a local characterization of the n-particle loops governing the void space surrounding the inclusions is presented in support of our argument. This paper is the first part of a series of two papers considering the relationships among hyperuniformity, jamming, and regularity of the void space in hard-particle packings.
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Affiliation(s)
- Chase E Zachary
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA.
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25
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Abstract
A local self-consistent Ornstein-Zernike (OZ) integral equation theory (IET) is proposed to provide a rapid route for obtaining thermodynamic and structural information for any thermodynamically stable or metastable state points in the bulk phase diagram without recourse to traditional thermodynamic integration, and extensive NVT-Monte Carlo simulations are performed on a recently proposed honeycomb potential in three dimensions to test the theory's reliability. The simulated quantities include radial distribution function (rdf) and excess internal energy, pressure, excess chemical potential, and excess Helmholtz free energy. It is demonstrated that (i) the theory reproduces the rdf very satisfactorily only if the bulk state does not enter deep into a two phases coexistence region; (ii) the excess internal energy is the only one of the four thermodynamic quantities investigated amenable to the most accurate prediction by the present theory, and the simulated pressure is somewhat overestimated by the theoretical calculations, but the deviation tends to vanish along with rising of the temperature; (iii) using the structural functions from the present local self-consistent OZ IET, a previously derived local expression, due to the present author, achieves even a higher accuracy in calculating for the excess chemical potential than the exact virial pressure formula for the pressure, and the resulting excess Helmholtz free energy is in surprisingly same with the simulation results due to offset of the errors. Based on the above observations, it is suggested that it may be a good procedure to integrate the theoretical excess internal energy along the isochors to get the excess Helmholtz free energy, which is then fitted to a polynomial to be used for calculation of all of other thermodynamic quantities in the framework of the OZ IET.
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Affiliation(s)
- Shiqi Zhou
- State Key Laboratory of Powder Metallurgy, Central South University, Changsha, Hunan 410083, China.
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Jiao Y, Stillinger FH, Torquato S. Geometrical ambiguity of pair statistics. II. Heterogeneous media. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2010; 82:011106. [PMID: 20866564 DOI: 10.1103/physreve.82.011106] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2010] [Indexed: 05/29/2023]
Abstract
In the first part of this series of two papers [Y. Jiao, F. H. Stillinger, and S. Torquato, Phys. Rev. E 81, 011105 (2010)], we considered the geometrical ambiguity of pair statistics associated with point configurations. Here we focus on the analogous problem for heterogeneous media (materials). Heterogeneous media are ubiquitous in a host of contexts, including composites and granular media, biological tissues, ecological patterns, and astrophysical structures. The complex structures of heterogeneous media are usually characterized via statistical descriptors, such as the n -point correlation function Sn. An intricate inverse problem of practical importance is to what extent a medium can be reconstructed from the two-point correlation function S2 of a target medium. Recently, general claims of the uniqueness of reconstructions using S2 have been made based on numerical studies, which implies that S2 suffices to uniquely determine the structure of a medium within certain numerical accuracy. In this paper, we provide a systematic approach to characterize the geometrical ambiguity of S2 for both continuous two-phase heterogeneous media and their digitized representations in a mathematically precise way. In particular, we derive the exact conditions for the case where two distinct media possess identical S2 , i.e., they form a degenerate pair. The degeneracy conditions are given in terms of integral and algebraic equations for continuous media and their digitized representations, respectively. By examining these equations and constructing their rigorous solutions for specific examples, we conclusively show that in general S2 is indeed not sufficient information to uniquely determine the structure of the medium, which is consistent with the results of our recent study on heterogeneous-media reconstruction [Y. Jiao, F. H. Stillinger, and S. Torquato, Proc. Natl. Acad. Sci. U.S.A. 106, 17634 (2009)]. The analytical examples include complex patterns composed of building blocks bearing the letter "T" and the word "WATER" as well as degenerate stacking variants of the densest sphere packing in three dimensions (Barlow films). Several numerical examples of degeneracy (e.g., reconstructions of polycrystal microstructures, laser-speckle patterns and sphere packings) are also given, which are virtually exact solutions of the degeneracy equations. The uniqueness issue of multiphase media reconstructions and additional structural information required to characterize heterogeneous media are discussed, including two-point quantities that contain topological connectedness information about the phases.
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Affiliation(s)
- Yang Jiao
- Department of Mechanical and Aerospace Engineering, Princeton University, Princeton, New Jersey 08544, USA
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