Colonization of a territory by a stochastic population under a strong Allee effect and a low immigration pressure

Impact of colonization history on the composition of ecological systems

Observational studies of ecological systems have shown that different species compositions can arise from distinct species arrival orders during community assembly-also known as colonization history. The presence of multiple interior equilibria in the positive orthant of the state space of the population dynamics will naturally lead to history dependency of the final state. However, it is still unclear whether and under which conditions colonization history will dominate community composition in the absence of multiple interior equilibria. Here, by considering that only one species can invade at a time and there are no recurrent invasions, we show clear evidence that the colonization history can have a big impact on the composition of ecological systems even in the absence of multiple interior equilibria. In particular, we first derive two simple rules to determine whether the composition of a community will depend on its colonization history in the absence of multiple interior equilibria and recurrent invasions. Then we apply them to communities governed by generalized Lotka-Volterra (gLV) dynamics and propose a numerical scheme to measure the probability of colonization history dependence. Finally, we show, via numerical simulations, that for gLV dynamics with a single interior equilibrium, the probability that community composition is dominated by colonization history increases monotonically with community size, network connectivity, and the variation of intrinsic growth rates across species. These results reveal that in the absence of multiple interior equilibria and recurrent invasions, community composition is a probabilistic process mediated by ecological dynamics via the interspecific variation and the size of regional pools.

Population switching under a time-varying environment

We study the switching dynamics of a stochastic population subjected to a deterministically time-varying environment. Our approach is demonstrated on a problem of population establishment, which is important in ecology. At the deterministic level, the model we study gives rise to a critical population size beyond which the system experiences establishment. Notably the latter has been shown to be strongly influenced by the interplay between demographic and environmental variations. Here we consider two prototypical examples of a time-varying environment: a temporary change in the environment, and a periodically varying environment. By employing a semiclassical approximation we compute, within exponential accuracy, the change in the establishment probability and mean establishment time of the population, due to the environmental variability. Our analytical results are verified by using a modified Gillespie algorithm which accounts for explicitly time-dependent reaction rates. Importantly, our theoretical approach can also be useful in studying switching dynamics in gene regulatory networks under external variations.

Population extinction under bursty reproduction in a time-modulated environment

In recent years nondemographic variability has been shown to greatly affect dynamics of stochastic populations. For example, nondemographic noise in the form of a bursty reproduction process with an a priori unknown burst size, or environmental variability in the form of time-varying reaction rates, have been separately found to dramatically impact the extinction risk of isolated populations. In this work we investigate the extinction risk of an isolated population under the combined influence of these two types of nondemographic variation. Using the so-called momentum-space Wentzel-Kramers-Brillouin (WKB) approach and accounting for the explicit time dependence in the reaction rates, we arrive at a set of time-dependent Hamilton equations. To this end, we evaluate the population's extinction risk by finding the instanton of the time-perturbed Hamiltonian numerically, whereas analytical expressions are presented in particular limits using various perturbation techniques. We focus on two classes of time-varying environments: periodically varying rates corresponding to seasonal effects and a sudden decrease in the birth rate corresponding to a catastrophe. All our theoretical results are tested against numerical Monte Carlo simulations with time-dependent rates and also against a numerical solution of the corresponding time-dependent Hamilton equations.

Effect of reaction-step-size noise on the switching dynamics of stochastic populations

In genetic circuits, when the messenger RNA lifetime is short compared to the cell cycle, proteins are produced in geometrically distributed bursts, which greatly affects the cellular switching dynamics between different metastable phenotypic states. Motivated by this scenario, we study a general problem of switching or escape in stochastic populations, where influx of particles occurs in groups or bursts, sampled from an arbitrary distribution. The fact that the step size of the influx reaction is a priori unknown and, in general, may fluctuate in time with a given correlation time and statistics, introduces an additional nondemographic reaction-step-size noise into the system. Employing the probability-generating function technique in conjunction with Hamiltonian formulation, we are able to map the problem in the leading order onto solving a stationary Hamilton-Jacobi equation. We show that compared to the "usual case" of single-step influx, bursty influx exponentially decreases the population's mean escape time from its long-lived metastable state. In particular, close to bifurcation we find a simple analytical expression for the mean escape time which solely depends on the mean and variance of the burst-size distribution. Our results are demonstrated on several realistic distributions and compare well with numerical Monte Carlo simulations.