1
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Jaros R, Tomicova E, Martinek R. Template subtraction based methods for non-invasive fetal electrocardiography extraction. Sci Rep 2024; 14:630. [PMID: 38182757 PMCID: PMC10770155 DOI: 10.1038/s41598-024-51213-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 01/02/2024] [Indexed: 01/07/2024] Open
Abstract
Assessment of fetal heart rate (fHR) through non-invasive fetal electrocardiogram (fECG) is challenging task. This study compares the performance of five template subtraction (TS) methods on Labor (12 5-min recordings) and Pregnancy datasets (10 20-min recordings). The methods include TS without adaptation, TS using singular value decomposition (TS[Formula: see text]), TS using linear prediction (TS[Formula: see text]), TS using scaling factor (TS[Formula: see text]), and sequential analysis (SA). The influence of the chosen maternal wavelet for the continuous wavelet transform (CWT) detector is also compared. The F1 score was used to measure performance. Each recording in both datasets consisted of four signals, resulting in a total comparison of 88 signals for the TS-based methods. The study reported the following results: F1 = 95.71% with TS, F1 = 95.93% with TS[Formula: see text], F1 = 95.30% with TS[Formula: see text], F1 = 95.82% with TS[Formula: see text], and F1 = 95.99% with SA. The study identified gaus3 as the suitable maternal wavelet for fetal R-peak detection using the CWT detector. Furthermore, the study classified signals from the tested datasets into categories of high, medium, and low quality, providing valuable insights for subsequent fECG signal extraction. This research contributes to advancing the understanding of non-invasive fECG signal processing and lays the groundwork for improving fetal monitoring in clinical settings.
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Affiliation(s)
- Rene Jaros
- Department of Cybernetics and Biomedical Engineering, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, 17. listopadu 2172/15, 708 00, Ostrava, Czechia.
| | - Eva Tomicova
- Department of Cybernetics and Biomedical Engineering, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, 17. listopadu 2172/15, 708 00, Ostrava, Czechia
| | - Radek Martinek
- Department of Cybernetics and Biomedical Engineering, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, 17. listopadu 2172/15, 708 00, Ostrava, Czechia
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2
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Huang H. A Novel Approach to Fetal ECG Extraction Using Temporal Convolutional Encoder-Decoder Network (TCED-Net). Pediatr Cardiol 2023; 44:1726-1735. [PMID: 37596420 DOI: 10.1007/s00246-023-03273-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Accepted: 08/10/2023] [Indexed: 08/20/2023]
Abstract
To extract weak fetal ECG signals from the mixed ECG signal on the mother's abdominal wall, providing a basis for accurately estimating fetal heart rate and analyzing fetal ECG morphology. First, based on the relationship between the maternal chest ECG signal and the maternal ECG component in the abdominal signal, the temporal convolutional encoder-decoder network (TCED-Net) model is trained to fit the nonlinear transmission of the maternal ECG signal from the chest to the abdominal wall. Then, the maternal chest ECG signal is nonlinearly transformed to estimate the maternal ECG component in the abdominal mixed signal. Finally, the estimated maternal ECG component is subtracted from the abdominal mixed signal to obtain the fetal ECG component. The simulation results on the FECGSYN dataset show that the proposed approach achieves the best performance in F1 score, mean square error (MSE), and quality signal-to-noise ratio (qSNR) (98.94%, 0.18, and 8.30, respectively). On the NI-FECG dataset, although the fetal ECG component is small in energy in the mixed signal, this method can effectively suppress the maternal ECG component and thus extract a clearer and more accurate fetal ECG signal. Compared with existing algorithms, the proposed method can extract clearer fetal ECG signals, which has significant application value for effective fetal health monitoring during pregnancy.
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Affiliation(s)
- Haiping Huang
- Zhaoqing Medical College, Zhaoqing, 526000, Guangdong, China.
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3
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Iyengar SS, Kumar A, Saha D, Sabry A. Synthesis of Hidden Subgroup Quantum Algorithms and Quantum Chemical Dynamics. J Chem Theory Comput 2023; 19:6082-6092. [PMID: 37703187 DOI: 10.1021/acs.jctc.3c00404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/15/2023]
Abstract
We describe a general formalism for quantum dynamics and show how this formalism subsumes several quantum algorithms, including the Deutsch, Deutsch-Jozsa, Bernstein-Vazirani, Simon, and Shor algorithms as well as the conventional approach to quantum dynamics based on tensor networks. The common framework exposes similarities among quantum algorithms and natural quantum phenomena: we illustrate this connection by showing how the correlated behavior of protons in water wire systems that are common in many biological and materials systems parallels the structure of Shor's algorithm.
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Affiliation(s)
- Srinivasan S Iyengar
- Department of Chemistry, Indiana University, Bloomington, Indiana 47405-7102, United States
- Quantum Science and Engineering Center (QSEc), Indiana University, Bloomington, Indiana 47405-7102, United States
| | - Anup Kumar
- Department of Chemistry, Indiana University, Bloomington, Indiana 47405-7102, United States
| | - Debadrita Saha
- Department of Chemistry, Indiana University, Bloomington, Indiana 47405-7102, United States
| | - Amr Sabry
- Quantum Science and Engineering Center (QSEc), Indiana University, Bloomington, Indiana 47405-7102, United States
- Department of Computer Science, Luddy School of Informatics, Computing, and Engineering, Indiana University, Bloomington, Indiana 47405-7102, United States
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4
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Liu X, Long Z, Li Z, Huang S, Wang Z. An improved adaptive periodical segment matrix algorithm for ECG denoising based on singular value decomposition. Technol Health Care 2023; 31:269-281. [PMID: 36031921 DOI: 10.3233/thc-220316] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
BACKGROUND Wearable devices that monitor heart health of cardiac disease patients in real time are in great demand. OBJECTIVE We propose an algorithm of improved segment periodical matrix construction for irregular electrocardiogram (ECG) signal denoising. METHOD While splitting the heartbeat based on each RR interval for periodical segments matrix construction, the as-filtered ECG signal is reconstructed by the maximum singular value after a singular value decomposition. RESULTS The results demonstrate a higher noise reduction effect with lower signal distortions of our methods compared to several singular value decomposition counterpart approaches. CONCLUSION Our method has great potential to enhance wearable devices diagnosis accuracy by denoising the complex noises such as electromyography artifacts in real-time ECG sensing.
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Affiliation(s)
- Xinggu Liu
- Med+X Center for Manufacturing, West China Hospital, Sichuan University, Chengdu, Sichuan, China.,Mechanic Engineering Department, University of Sichuan, Chengdu, Sichuan, China
| | - Zhiming Long
- Med+X Center for Manufacturing, West China Hospital, Sichuan University, Chengdu, Sichuan, China.,Mechanic Engineering Department, University of Sichuan, Chengdu, Sichuan, China
| | - Zongyuan Li
- Mechanic Engineering Department, University of Sichuan, Chengdu, Sichuan, China
| | - Shudong Huang
- College of Computer Science, University of Sichuan, Chengdu, Sichuan, China
| | - Zhuqing Wang
- Med+X Center for Manufacturing, West China Hospital, Sichuan University, Chengdu, Sichuan, China.,Mechanic Engineering Department, University of Sichuan, Chengdu, Sichuan, China
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5
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Li H, Liu T, Wu X, Li S. Correlated SVD and Its Application in Bearing Fault Diagnosis. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2023; 34:355-365. [PMID: 34403348 DOI: 10.1109/tnnls.2021.3094799] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The singular value decomposition (SVD) based on the Hankel matrix is commonly used in signal processing and fault diagnosis. The noise reduction performance of SVD based on the Hankel matrix is affected by three factors: the reconstruction component(s), the structure of the Hankel matrix, and the point number of the analysis data. In this article, the three influencing factors are systematically studied, and a method based on correlated SVD (C-SVD) is proposed and successfully applied to bearing fault diagnosis. First, perform SVD analysis on the collected original signal. Then, the reconstructed component(s) determination method of SVD based on the combination of singular value ratio (SVR) and correlation coefficient is proposed. Then, based on the SVR, using the envelope kurtosis as the indicator, the optimal structure of the Hankel matrix (number of rows and columns) is studied. Then, the number of data points of the analysis signal is discussed, and the constraint range is given. Finally, the envelope power spectrum analysis is performed on the reconstructed signal to extract the fault features. The proposed C-SVD method is compared with the existing typical methods and applied to the simulated signal and the actual bearing fault signal, and its superiority is verified.
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6
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Karthik G, Samson Ravindran R. Heuristic RNN-based Kalman filter for fetal electrocardiogram extraction. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2022. [DOI: 10.3233/jifs-221549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Fetal Electrocardiogram (FECG) analysis helps in diagnosis of fetal heart. Extracting FECG from composite abdominal signal that contains noises like maternal ECG (MECG), electrical interference etc is a topic of great research interest, and several approaches have been reported. The proposed method is Heuristic RNN-based Kalman Filter for Fetal Electrocardiogram Extraction (HRKFFEE) which is based on redundant noise and signal patterns in the residual signal of FECG and MECG. Two functional blocks are used in the proposed method. The first functional block is based on Heuristic RNN equipped with legacy Long Short-Term Memory (LSTM) for assembling a knowledgebase and the second functional block is RNN-based Kalman filter. Upon testing, the proposed method delivers better average values of accuracy, F Score, Precision and Specificity as 93.118%, 93.106%, 92.9495 % and 92.98% respectively.
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Affiliation(s)
- G.L. Karthik
- Department of Biomedical Engineering, SNS College of Technology (Autonomous), Coimbatore
| | - R. Samson Ravindran
- Department of Electronics and Communication Engineering, Mahendra Engineering College (Autonomous), Namakkal
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7
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Wang Y, Dong X, Wang L, Chen W, Chen H. A novel SSD fault detection method using GRU-based Sparse Auto-Encoder for dimensionality reduction. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2022. [DOI: 10.3233/jifs-220590] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
In recent years, with the development of flash memory technology, storage systems in large data centers are typically built upon thousands or even millions of solid-state drives (SSDs). Therefore, the failure of SSDs is inevitable. An SSD failure may cause unrecoverable data loss or unavailable system service, resulting in catastrophic results. Active fault detection technologies are able to detect device problems in advance, so it is gaining popularity. Recent trends have turned toward applying AI algorithms based on SSD SMART data for fault detection. However, SMART data of new SSDs contains a large number of features, and the high dimension of data features results in poor accuracy of AI algorithms for fault detection. To tackle the above problems, we improve the structure of traditional Auto-Encoder (AE) based on GRU and propose an SSD fault detection method – GAL based on dimensionality reduction with Gated Recurrent Unit (GRU) sparse autoencoder (GRUAE) by combining the temporal characteristics of SSD SMART data. The proposed method trains the GRUAE model with SSD SMART data firstly, and then adopts the encoder of GRUAE model as the dimensionality reduction tool to reduce the original high-dimensional SSD SMART data, aiming at reducing the influence of noise features in original SSD SAMRT data and highlight the features more relevant to data characteristics to improve the accuracy of fault detection. Finally, LSTM is adopted for fault detection with low-dimensional SSD SMART data. Experimental results on real SSD dataset from Alibaba show that the fault detection accuracy of various AI algorithms can be improved by varying degrees after dimensionality reduction with the proposed method, and GAL performs best among all methods.
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Affiliation(s)
- Yufei Wang
- Xi’an Jiaotong University, Xian Ning west road No.28, Xi’an City, Shaanxi, China
| | - Xiaoshe Dong
- Xi’an Jiaotong University, Xian Ning west road No.28, Xi’an City, Shaanxi, China
| | - Longxiang Wang
- Xi’an Jiaotong University, Xian Ning west road No.28, Xi’an City, Shaanxi, China
| | - Weiduo Chen
- Xi’an Jiaotong University, Xian Ning west road No.28, Xi’an City, Shaanxi, China
| | - Heng Chen
- Xi’an Jiaotong University, Xian Ning west road No.28, Xi’an City, Shaanxi, China
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8
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Jaba Deva Krupa A, Dhanalakshmi S, Kumar R. Joint time-frequency analysis and non-linear estimation for fetal ECG extraction. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103569] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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9
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Rahman S, Karmakar C, Natgunanathan I, Yearwood J, Palaniswami M. Robustness of electrocardiogram signal quality indices. J R Soc Interface 2022; 19:20220012. [PMID: 35414211 PMCID: PMC9006023 DOI: 10.1098/rsif.2022.0012] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Electrocardiogram (ECG) signal quality indices (SQIs) are essential for improving diagnostic accuracy and reliability of ECG analysis systems. In various practical applications, the ECG signals are corrupted by different types of noise. These corrupted ECG signals often provide insufficient and incorrect information regarding a patient’s health. To solve this problem, signal quality measurements should be made before an ECG signal is used for decision-making. This paper investigates the robustness of existing popular statistical signal quality indices (SSQIs): relative power of QRS complex (SQIp), skewness (SQIskew), signal-to-noise ratio (SQIsnr), higher order statistics SQI (SQIhos) and peakedness of kurtosis (SQIkur). We analysed the robustness of these SSQIs against different window sizes across diverse datasets. Results showed that the performance of SSQIs considerably fluctuates against varying datasets, whereas the impact of varying window sizes was minimal. This fluctuation occurred due to the use of a static threshold value for classifying noise-free ECG signals from the raw ECG signals. Another drawback of these SSQIs is the bias towards noise-free ECG signals, that limits their usefulness in clinical settings. In summary, the fixed threshold-based SSQIs cannot be used as a robust noise detection system. In order to solve this fixed threshold problem, other techniques can be developed using adaptive thresholds and machine-learning mechanisms.
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Affiliation(s)
- Saifur Rahman
- School of Information Technology, Deakin University, Geelong 3225, Australia
| | - Chandan Karmakar
- School of Information Technology, Deakin University, Geelong 3225, Australia
| | | | - John Yearwood
- School of Information Technology, Deakin University, Geelong 3225, Australia
| | - Marimuthu Palaniswami
- Department of Electrical and Electronic Engineering, University of Melbourne, Melbourne, Victoria 3010, Australia
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10
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Shokouhmand A, Antoine C, Young BK, Tavassolian N. Multi-modal Framework for Fetal Heart Rate Estimation: Fusion of Low-SNR ECG and Inertial Sensors. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2021; 2021:7166-7169. [PMID: 34892753 DOI: 10.1109/embc46164.2021.9629975] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
This study presents a novel multi-modal framework for fetal heart rate extraction, which incorporates wearable seismo-cardiography (SCG), gyro-cardiography (GCG), and electrocardiography (ECG) readings from ten pregnant women. Firstly, a signal refinement method based on empirical mode decomposition (EMD) is proposed to extract the desired signal components associated with fetal heart rate (FHR). Afterwards, two techniques are developed to fuse the information from different modalities. The first method, named early fusion, is intended to combine the refined signals of different modalities through intra-modality fusion, intermodality fusion, and FHR estimation. The other fusion approach, i.e., late fusion, includes FHR estimation and intermodality FHR fusion. FHR values are estimated and compared with readings from a simultaneously-recorded cardiotocography (CTG) sensor. It is demonstrated that the best performance belongs to the late-fusion approach with 87.00% of positive percent agreement (PPA), 6.30% of absolute percent error (APE), and 10.55 beats-per-minute (BPM) of root-meansquare-error (RMSE).Clinical Relevance- The proposed framework allows for the continuous monitoring of the health status of the fetus in expectant women. The approach is accurate and cost-effective due to the use of advanced signal processing techniques and lowcost wearable sensors, respectively.
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11
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Fotiadou E, van Sloun RJG, van Laar JOEH, Vullings R. A dilated inception CNN-LSTM network for fetal heart rate estimation. Physiol Meas 2021; 42. [PMID: 33853039 DOI: 10.1088/1361-6579/abf7db] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Accepted: 04/14/2021] [Indexed: 01/16/2023]
Abstract
Objective. Fetal heart rate (HR) monitoring is routinely used during pregnancy and labor to assess fetal well-being. The noninvasive fetal electrocardiogram (ECG), obtained by electrodes on the maternal abdomen, is a promising alternative to standard fetal monitoring. Subtraction of the maternal ECG from the abdominal measurements results in fetal ECG signals, in which the fetal HR can be determined typically through R-peak detection. However, the low signal-to-noise ratio and the nonstationary nature of the fetal ECG make R-peak detection a challenging task.Approach. We propose an alternative approach that instead of performing R-peak detection employs deep learning to directly determine the fetal HR from the extracted fetal ECG signals. We introduce a combination of dilated inception convolutional neural networks (CNN) with long short-term memory networks to capture both short-term and long-term temporal dynamics of the fetal HR. The robustness of the method is reinforced by a separate CNN-based classifier that estimates the reliability of the outcome.Main results. Our method achieved a positive percent agreement (within 10% of the actual fetal HR value) of 97.3% on a dataset recorded during labor and 99.6% on set-A of the 2013 Physionet/Computing in Cardiology Challenge exceeding top-performing state-of-the-art algorithms from the literature.Significance. The proposed method can potentially improve the accuracy and robustness of fetal HR extraction in clinical practice.
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Affiliation(s)
- E Fotiadou
- Department of Electrical Engineering, Eindhoven University of Technology, Eindhoven, 5612 AP, The Netherlands
| | - R J G van Sloun
- Department of Electrical Engineering, Eindhoven University of Technology, Eindhoven, 5612 AP, The Netherlands
| | - J O E H van Laar
- Department of Obstetrics and Gynaecology, Máxima Medical Center, Veldhoven, 5504 DB, The Netherlands
| | - R Vullings
- Department of Electrical Engineering, Eindhoven University of Technology, Eindhoven, 5612 AP, The Netherlands
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12
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Rasti-Meymandi A, Ghaffari A. AECG-DecompNet: abdominal ECG signal decomposition through deep-learning model. Physiol Meas 2021; 42. [PMID: 33706298 DOI: 10.1088/1361-6579/abedc1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Accepted: 03/11/2021] [Indexed: 11/11/2022]
Abstract
Objective.The accurate decomposition of a mother's abdominal electrocardiogram (AECG) to extract the fetal ECG (FECG) is a primary step in evaluating the fetus's health. However, the AECG is often affected by different noises and interferences, such as the maternal ECG (MECG), making it hard to evaluate the FECG signal. In this paper, we propose a deep-learning-based framework, namely 'AECG-DecompNet', to efficiently extract both MECG and FECG from a single-channel abdominal electrode recording.Approach.AECG-DecompNet is based on two series networks to decompose AECG, one for MECG estimation and the other to eliminate interference and noise. Both networks are based on an encoder-decoder architecture with internal and external skip connections to reconstruct the signals better.Main results.Experimental results show that the proposed framework performs much better than utilizing one network for direct FECG extraction. In addition, the comparison of the proposed framework with popular single-channel extraction techniques shows superior results in terms of QRS detection while indicating its ability to preserve morphological information. AECG-DecompNet achieves exceptional accuracy in theprecisionmetric (97.4%), higher accuracy inrecallandF1metrics (93.52% and 95.42% respectively), and outperforms other state-of-the-art approaches.Significance.The proposed method shows a notable performance in preserving the morphological information when the FECG within the AECG signal is weak.
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Affiliation(s)
- Arash Rasti-Meymandi
- Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology, Tehran, Iran
| | - Aboozar Ghaffari
- Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology, Tehran, Iran
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13
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Jaba Deva Krupa A, Dhanalakshmi S, R K. An improved parallel sub-filter adaptive noise canceler for the extraction of fetal ECG. ACTA ACUST UNITED AC 2021; 66:503-514. [PMID: 33946135 DOI: 10.1515/bmt-2020-0313] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Accepted: 04/20/2021] [Indexed: 11/15/2022]
Abstract
Non-invasive extraction of fetal electrocardiogram (FECG) by processing the abdominal signals is emerging as a promising approach in the areas of obstetrics and gynecology. This paper presents a two-stage improved non-linear adaptive filter for FECG extraction. The reference input to the adaptive noise canceler (ANC) is first processed using an adaptive neuro-fuzzy inference system (ANFIS) to estimate the non-linear maternal component in abdominal signals. A parallel sub-filter (PSF) ANC is proposed to assess the fetal ECG from the abdominal signal. The PSF-ANC decomposes a single adaptive filter into multiple sub-filters to improve the convergence performance. The filter coefficients of PSF-ANC adaptively obtained using normalised least mean square algorithm by minimizing the mean square error. Different error and common error algorithms are proposed based on the computation of the error signal. A synthetic data from the FECG synthetic database is used to evaluate the convergence performance. Two real-time data from the Daisy database and the Non-invasive FECG database from Physionet are used to evaluate the proposed ANFIS-PSF's performance qualitative and quantitatively. The results justify the performance improvement of proposed ANFIS-PSF ANC compared to the state of art techniques. The proposed scheme achieves a sensitivity of 97.92%, 94.52% accuracy, a positive predictive value of 94.66%, and an F1 score of 96.12%.
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Affiliation(s)
- Abel Jaba Deva Krupa
- Faculty of Engineering and Technology, Department of ECE, College of Engineering and Technology, SRM Institute of Science and Technology, Kancheepuram,Tamil Nadu, India
| | - Samiappan Dhanalakshmi
- Faculty of Engineering and Technology, Department of ECE, College of Engineering and Technology, SRM Institute of Science and Technology, Kancheepuram,Tamil Nadu, India
| | - Kumar R
- Faculty of Engineering and Technology, Department of ECE, College of Engineering and Technology, SRM Institute of Science and Technology, Kancheepuram,Tamil Nadu, India
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14
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Peri E, Xu L, Ciccarelli C, Vandenbussche NL, Xu H, Long X, Overeem S, van Dijk JP, Mischi M. Singular Value Decomposition for Removal of Cardiac Interference from Trunk Electromyogram. SENSORS 2021; 21:s21020573. [PMID: 33467431 PMCID: PMC7829983 DOI: 10.3390/s21020573] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Revised: 01/04/2021] [Accepted: 01/12/2021] [Indexed: 01/10/2023]
Abstract
A new algorithm based on singular value decomposition (SVD) to remove cardiac contamination from trunk electromyography (EMG) is proposed. Its performance is compared to currently available algorithms at different signal-to-noise ratios (SNRs). The algorithm is applied on individual channels. An experimental calibration curve to adjust the number of SVD components to the SNR (0–20 dB) is proposed. A synthetic dataset is generated by the combination of electrocardiography (ECG) and EMG to establish a ground truth reference for validation. The performance is compared with state-of-the-art algorithms: gating, high-pass filtering, template subtraction (TS), and independent component analysis (ICA). Its applicability on real data is investigated in an illustrative diaphragm EMG of a patient with sleep apnea. The SVD-based algorithm outperforms existing methods in reconstructing trunk EMG. It is superior to the others in the time (relative mean squared error < 15%) and frequency (shift in mean frequency < 1 Hz) domains. Its feasibility is proven on diaphragm EMG, which shows a better agreement with the respiratory cycle (correlation coefficient = 0.81, p-value < 0.01) compared with TS and ICA. Its application on real data is promising to non-obtrusively estimate respiratory effort for sleep-related breathing disorders. The algorithm is not limited to the need for additional reference ECG, increasing its applicability in clinical practice.
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Affiliation(s)
- Elisabetta Peri
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
- Correspondence:
| | - Lin Xu
- School of Information Science and Technology, ShanghaiTech University, Shanghai 201210, China;
| | - Christian Ciccarelli
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
| | - Nele L. Vandenbussche
- Center for Sleep Medicine, Kempenhaeghe, P.O. Box 61, 5590 AB Heeze, The Netherlands;
| | - Hongji Xu
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
| | - Xi Long
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
| | - Sebastiaan Overeem
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
- Center for Sleep Medicine, Kempenhaeghe, P.O. Box 61, 5590 AB Heeze, The Netherlands;
| | - Johannes P. van Dijk
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
- Center for Sleep Medicine, Kempenhaeghe, P.O. Box 61, 5590 AB Heeze, The Netherlands;
- Department of Orthodontics, University of Ulm, 89081 Ulm, Germany
| | - Massimo Mischi
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
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15
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Chen X, Lin J, Huang C, He L. A novel method based on Adaptive Periodic Segment Matrix and Singular Value Decomposition for removing EMG artifact in ECG signal. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2020.102060] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Praneeth CHNVS, Abel JDK, Samiappan D, Kumar R, Kumar SP, Nitin PV. A COMPARISON ON VARIANTS OF LMS USED IN FIR ADAPTIVE NOISE CANCELLERS FOR FETAL ECG EXTRACTION. BIOMEDICAL ENGINEERING: APPLICATIONS, BASIS AND COMMUNICATIONS 2020. [DOI: 10.4015/s101623722050026x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Fetal electrocardiogram (FECG) non-invasively obtained through abdominal recordings serves as a promising diagnostic tool for fetal health monitoring during pregnancy. However, in the abdominal ECG (AECG) signal, FECG overlaps with maternal ECG (MECG) in both temporal and spectral domains in addition to interference from various sources like electromyogram, electrogastrogram, motion artifacts and other noises. The objective of this paper is to eliminate MECG components from AECG signal to extract FECG signal through FIR adaptive noise canceller (ANC) with filter coefficients updated using adaptive algorithms. Adaptive filters are suitable for current problem of interest and Least Mean Square (LMS) and its variants are analyzed for the problem of FECG extraction. We have compared the four variants of LMS such as normalized LMS (NLMS), sign-error algorithm, least mean fourth (LMF) algorithms for FECG extraction. The algorithms are evaluated using real-time abdominal ECG recordings acquired from daisy database. The performance of each algorithm is evaluated using various parameters like sensitivity, accuracy, positive predictive values and [Formula: see text] score. Further, the convergence rate for different algorithms are plotted and analyzed. From the simulation results, it is observed that the LMF algorithm outperforms its counterparts by providing an accuracy and positive predictive value of 73.3%, sensitivity of 100% and [Formula: see text] measure of 84.5%. The convergence plots obtained justify that LMF algorithm has a faster convergence rate compared to the other variants of LMS.
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Affiliation(s)
- CH. N. V. S. Praneeth
- Department of Electronics and Communication Engineering, SRM Institute of Science and Technology, Chengalpattu, Tamil Nadu, India
| | - Jaba Deva Krupa Abel
- Department of Electronics and Communication Engineering, SRM Institute of Science and Technology, Chengalpattu, Tamil Nadu, India
| | - Dhanalakshmi Samiappan
- Department of Electronics and Communication Engineering, SRM Institute of Science and Technology, Chengalpattu, Tamil Nadu, India
| | - R. Kumar
- Department of Electronics and Communication Engineering, SRM Institute of Science and Technology, Chengalpattu, Tamil Nadu, India
| | - S. Pravin Kumar
- Department of Biomedical Engineering, SSN College of Engineering, Tamil Nadu, India
| | - Patnala Venkat Nitin
- Department of Electronics and Communication Engineering, SRM Institute of Science and Technology, Chengalpattu, Tamil Nadu, India
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Lai D, Ding F, Xie C, Zhang Y. An Adaptive Respiratory Motion Compensation Algorithm with Singular Value Decomposition for Intracardiac Catheter Tracking . ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2020:5065-5068. [PMID: 33019125 DOI: 10.1109/embc44109.2020.9176152] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
During radiofrequency catheterization for atrial fibrillation, how to accurately obtain non-X-ray intracardiac catheter position is crucial to successful endocardial mapping and ablation treatment. The major limitation of the cost-effective intracardiac catheter tracking with transthoracic electrical-fields is that the distribution of electrical conductivity within the volume torso remains dynamics and nonlinear and changes with the patient's respiratory motion. Studies have shown respiratory motion-induced catheter localization error over 20 mm. In this study, we present a novel adaptive respiratory motion compensation algorithm with singular value decomposition for reducing the interference of respiration to ensure the accuracy of intracardiac catheter localization. Animal experiments in swine were carried out for assessing the performance of the propose method through a comparison with a traditional filtering method. The obtained results demonstrate that the proposed adaptive filter based on the SVD performed well to track the original information of catheter position by accurately and timely removing the respiratory interference in case of either a fast- or slow- moving catheter operation. Future applications of this algorithm would be potentially useful for intracardiac catheter localization and real-time tracking.
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Taha L, Abdel-Raheem E. A Null Space-Based Blind Source Separation for Fetal Electrocardiogram Signals. SENSORS 2020; 20:s20123536. [PMID: 32580397 PMCID: PMC7348901 DOI: 10.3390/s20123536] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Revised: 06/19/2020] [Accepted: 06/19/2020] [Indexed: 11/16/2022]
Abstract
This paper presents a new non-invasive deterministic algorithm of extracting the fetal Electrocardiogram (FECG) signal based on a new null space idempotent transformation matrix (NSITM). The mixture matrix is used to compute the ITM. Then, the fetal ECG (FECG) and maternal ECG (MECG) signals are extracted from the null space of the ITM. Next, MECG and FECG peaks detection, control logic, and adaptive comb filter are used to remove the unwanted MECG component from the raw FECG signal, thus extracting a clean FECG signal. The visual results from Daisy and Physionet real databases indicate that the proposed algorithm is effective in extracting the FECG signal, which can be compared with principal component analysis (PCA), fast independent component analysis (FastICA), and parallel linear predictor (PLP) filter algorithms. Results from Physionet synthesized ECG data show considerable improvement in extraction performances over other algorithms used in this work, considering different additive signal-to-noise ratio (SNR) increasing from 0 dB to 12 dB, and considering different fetal-to-maternal SNR increasing from -30 dB to 0 dB. The FECG detection of the NSITM is evaluated using statistical measures and results show considerable improvement in the sensitivity (SE), the accuracy (ACC), and the positive predictive value (PPV), as compared with other algorithms. The study demonstrated that the NSITM is a feasible algorithm for FECG extraction.
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Vullings R, van Laar JOEH. Non-invasive Fetal Electrocardiography for Intrapartum Cardiotocography. Front Pediatr 2020; 8:599049. [PMID: 33363064 PMCID: PMC7755891 DOI: 10.3389/fped.2020.599049] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Accepted: 11/19/2020] [Indexed: 11/19/2022] Open
Abstract
Fetal monitoring is important to diagnose complications that can occur during pregnancy. If detected timely, these complications might be resolved before they lead to irreversible damage. Current fetal monitoring mainly relies on cardiotocography, the simultaneous registration of fetal heart rate and uterine activity. Unfortunately, the technology to obtain the cardiotocogram has limitations. In current clinical practice the fetal heart rate is obtained via either an invasive scalp electrode, that poses risks and can only be applied during labor and after rupture of the fetal membranes, or via non-invasive Doppler ultrasound technology that is inaccurate and suffers from loss of signal, in particular in women with high body mass, during motion, or in preterm pregnancies. In this study, transabdominal electrophysiological measurements are exploited to provide fetal heart rate non-invasively and in a more reliable manner than Doppler ultrasound. The performance of the fetal heart rate detection is determined by comparing the fetal heart rate to that obtained with an invasive scalp electrode during intrapartum monitoring. The performance is gauged by comparing it to performances mentioned in literature on Doppler ultrasound and on two commercially-available devices that are also based on transabdominal fetal electrocardiography.
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Affiliation(s)
- Rik Vullings
- Biomedical Diagnostics Lab Eindhoven, Department of Electrical Engineering, Eindhoven University of Technology, Eindhoven, Netherlands.,Nemo Healthcare, Veldhoven, Netherlands
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20
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DeGregorio N, Iyengar SS. Challenges in constructing accurate methods for hydrogen transfer reactions in large biological assemblies: rare events sampling for mechanistic discovery and tensor networks for quantum nuclear effects. Faraday Discuss 2020; 221:379-405. [DOI: 10.1039/c9fd00071b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We present two methods that address the computational complexities arising in hydrogen transfer reactions in enzyme active sites.
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Affiliation(s)
- Nicole DeGregorio
- Department of Chemistry
- Department of Physics
- Indiana University
- Bloomington
- USA
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21
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Zhang Y, Yu S. Single-lead noninvasive fetal ECG extraction by means of combining clustering and principal components analysis. Med Biol Eng Comput 2019; 58:419-432. [PMID: 31858419 DOI: 10.1007/s11517-019-02087-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2019] [Accepted: 11/22/2019] [Indexed: 11/27/2022]
Abstract
Early detection of potential hazards in the fetal physiological state during pregnancy and childbirth is very important. Noninvasive fetal electrocardiogram (FECG) can be extracted from the maternal abdominal signal. However, due to the interference of maternal electrocardiogram and other noises, the task of extraction is challenging. This paper introduces a novel single-lead noninvasive fetal electrocardiogram extraction method based on the technique of clustering and PCA. The method is divided into four steps: (1) pre-preprocessing; (2) fetal QRS complexes and maternal QRS complexes detection based on k-means clustering algorithm with the feature of max-min pairs; (3) FQRS correction step is to improve the performance of step two; (4) template subtraction based on PCA is introduced to extract FECG waveform. To verify the performance of the proposed algorithm, two clinical open-access databases are used to check the performance of FQRS detection. As a result, the method proposed shows the average PPV of 95.35%, Se of 96.23%, and F1-measure of 95.78%. Furthermore, the robustness test is carried out on an artificial database which proves that the algorithm has certain robustness in various noise environments. Therefore, this method is feasible and reliable to detect fetal heart rate and extract FECG. Graphical abstract Early detection of potential hazards in the fetal physiological state during pregnancy and childbirth is very important. Noninvasive fetal electrocardiogram (FECG) can be extracted from maternal abdominal signal. However, due to the interference of maternal electrocardiogram and other noises, the task of extraction is challenging. This paper introduces a novel single-lead noninvasive fetal electrocardiogram extraction method based on the technique of clustering and PCA. The method is divided into four steps: (1) pre-preprocessing; (2) fetal QRS complexes and maternal QRS complexes detection based on k-means clustering algorithm with the feature of max-min pairs; (3) FQRS correction step is to improve the performance of step two; (4) template subtraction based on PCA is introduced to extract FECG waveform. To verify the performance of algorithm, two clinical open-access databases are used to check the performance of FQRS detection. As a result, the method proposed shows the average PPV of 95.35%, Se of 96.23%, and F1-measure of 95.78%. Furthermore, the robustness test is carried out on an artificial database which proves that the algorithm has certain robustness in various noise environments. Therefore, this method is feasible and reliable to detect fetal heart rate and extract FECG.
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Affiliation(s)
- Yue Zhang
- Division of Information Science and Technology, Tsinghua University, Shenzhen, China
| | - Shuai Yu
- Division of Information Science and Technology, Tsinghua University, Shenzhen, China.
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Buongiorno D, Bortone I, Cascarano GD, Trotta GF, Brunetti A, Bevilacqua V. A low-cost vision system based on the analysis of motor features for recognition and severity rating of Parkinson's Disease. BMC Med Inform Decis Mak 2019; 19:243. [PMID: 31830986 PMCID: PMC6907109 DOI: 10.1186/s12911-019-0987-5] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
Background Assessment and rating of Parkinson’s Disease (PD) are commonly based on the medical observation of several clinical manifestations, including the analysis of motor activities. In particular, medical specialists refer to the MDS-UPDRS (Movement Disorder Society – sponsored revision of Unified Parkinson’s Disease Rating Scale) that is the most widely used clinical scale for PD rating. However, clinical scales rely on the observation of some subtle motor phenomena that are either difficult to capture with human eyes or could be misclassified. This limitation motivated several researchers to develop intelligent systems based on machine learning algorithms able to automatically recognize the PD. Nevertheless, most of the previous studies investigated the classification between healthy subjects and PD patients without considering the automatic rating of different levels of severity. Methods In this context, we implemented a simple and low-cost clinical tool that can extract postural and kinematic features with the Microsoft Kinect v2 sensor in order to classify and rate PD. Thirty participants were enrolled for the purpose of the present study: sixteen PD patients rated according to MDS-UPDRS and fourteen healthy paired subjects. In order to investigate the motor abilities of the upper and lower body, we acquired and analyzed three main motor tasks: (1) gait, (2) finger tapping, and (3) foot tapping. After preliminary feature selection, different classifiers based on Support Vector Machine (SVM) and Artificial Neural Networks (ANN) were trained and evaluated for the best solution. Results Concerning the gait analysis, results showed that the ANN classifier performed the best by reaching 89.4% of accuracy with only nine features in diagnosis PD and 95.0% of accuracy with only six features in rating PD severity. Regarding the finger and foot tapping analysis, results showed that an SVM using the extracted features was able to classify healthy subjects versus PD patients with great performances by reaching 87.1% of accuracy. The results of the classification between mild and moderate PD patients indicated that the foot tapping features were the most representative ones to discriminate (81.0% of accuracy). Conclusions The results of this study have shown how a low-cost vision-based system can automatically detect subtle phenomena featuring the PD. Our findings suggest that the proposed tool can support medical specialists in the assessment and rating of PD patients in a real clinical scenario.
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Affiliation(s)
- Domenico Buongiorno
- Department of Electrical and Information Engineering, Polytechnic University of Bari, Bari, Italy.,Apulian Bioengineering s.r.l., Via delle Violette 14, Modugno (BA), Italy
| | - Ilaria Bortone
- Institute of Clinical Physiology, National Research Council, Pisa, Italy
| | - Giacomo Donato Cascarano
- Department of Electrical and Information Engineering, Polytechnic University of Bari, Bari, Italy.,Apulian Bioengineering s.r.l., Via delle Violette 14, Modugno (BA), Italy
| | | | - Antonio Brunetti
- Department of Electrical and Information Engineering, Polytechnic University of Bari, Bari, Italy.,Apulian Bioengineering s.r.l., Via delle Violette 14, Modugno (BA), Italy
| | - Vitoantonio Bevilacqua
- Department of Electrical and Information Engineering, Polytechnic University of Bari, Bari, Italy. .,Apulian Bioengineering s.r.l., Via delle Violette 14, Modugno (BA), Italy.
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Su PC, Miller S, Idriss S, Barker P, Wu HT. Recovery of the fetal electrocardiogram for morphological analysis from two trans-abdominal channels via optimal shrinkage. Physiol Meas 2019; 40:115005. [PMID: 31585453 DOI: 10.1088/1361-6579/ab4b13] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
OBJECTIVE We propose a novel algorithm to recover fetal electrocardiogram (ECG) for both the fetal heart rate analysis and morphological analysis of its waveform from two or three trans-abdominal maternal ECG channels. APPROACH We design an algorithm based on the optimal-shrinkage under the wave-shape manifold model. For the fetal heart rate analysis, the algorithm is evaluated on publicly available database, 2013 PhyioNet/Computing in Cardiology Challenge, set A (CinC2013). For the morphological analysis, we analyze CinC2013 and another publicly available database, non-invasive fetal ECG arrhythmia database (nifeadb), and propose to simulate semi-real databases by mixing the MIT-BIH normal sinus rhythm database and MITDB arrhythmia database. MAIN RESULTS For the fetal R peak detection, the proposed algorithm outperforms all algorithms under comparison. For the morphological analysis, the algorithm provides an encouraging result in recovery of the fetal ECG waveform, including PR, QT and ST intervals, even when the fetus has arrhythmia, both in real and simulated databases. SIGNIFICANCE To the best of our knowledge, this is the first work focusing on recovering the fetal ECG for morphological analysis from two or three channels with an algorithm potentially applicable for continuous fetal electrocardiographic monitoring, which creates the potential for long term monitoring purpose.
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Affiliation(s)
- Pei-Chun Su
- Department of Mathematics, Duke University, Durham, NC, United States of America
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Fetal electrocardiography extraction with residual convolutional encoder-decoder networks. AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2019; 42:1081-1089. [PMID: 31617154 DOI: 10.1007/s13246-019-00805-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2019] [Accepted: 09/30/2019] [Indexed: 12/31/2022]
Abstract
In the context of fetal monitoring, non-invasive fetal electrocardiography is an alternative approach to the traditional Doppler ultrasound technique. However, separating the fetal electrocardiography (FECG) component from the abdominal electrocardiography (AECG) remains a challenging task. This is mainly due to the interference from maternal electrocardiography, which has larger amplitude and overlaps with the FECG in both temporal and frequency domains. The main objective is to present a novel approach to FECG extraction by using a deep learning strategy from single-channel AECG recording. A residual convolutional encoder-decoder network (RCED-Net) is developed for this task of FECG extraction. The single-channel AECG recording is the input to the RCED-Net. And the RCED-Net extracts the feature of AECG and directly outputs the estimate of FECG component in the AECG recording. The AECG recordings from two different databases are collected to illustrate the efficiency of the proposed method. And the achieved results show that the proposed technique exhibits the best performance when compared to the existing methods in the literature. This work is a proof of concept that the proposed method could effectively extract the FECG component from AECG recordings. The focus on single-channel FECG extraction technique contributes to the commercial applications for long-term fetal monitoring.
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QRStree: A prefix tree-based model to fetal QRS complexes detection. PLoS One 2019; 14:e0223057. [PMID: 31574123 PMCID: PMC6772072 DOI: 10.1371/journal.pone.0223057] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2019] [Accepted: 09/12/2019] [Indexed: 11/23/2022] Open
Abstract
Non-invasive fetal electrocardiography (NI-FECG) plays an important role in fetal heart rate (FHR) measurement during the pregnancy. However, despite the large number of methods that have been proposed for adult ECG signal processing, the analysis of NI-FECG remains challenging and largely unexplored. In this study, we propose a prefix tree-based framework, called QRStree, for FHR measurement directly from the abdominal ECG (AECG). The procedure is composed of three stages: Firstly, a preprocessing stage is employed for noise elimination. Secondly, the proposed prefix tree-based method is used for fetal QRS complexes (FQRS) detection. Finally, a correction stage is applied for false positive and false negative correction. The novelty of the framework relies on using the range of FHR to establish the connections between the FQRS. The consecutive FQRS can be considered as strings composed of alphabet items, thus we can use the prefix tree to store them. A vertex of the tree contains an alphabet, thus a path of the tree gives a string. Such that, by storing the connections of the FQRS into the prefix tree structure, the problem of FQRS detection converts to a problem of optimal path selection. Specifically, after selecting the optimal path of the tree, the nodes in the optimal path are collected as detected FQRS. Since the prefix tree can cover every possible combination of the FQRS candidates, it has the potential to reduce the occurrence of miss detections. Results on two different databases show that the proposed method is effective in FHR measurement from single-channel AECG. The focus on single-channel FHR measurement facilitates the long-term monitoring for healthcare at home.
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Kahankova R, Martinek R, Jaros R, Behbehani K, Matonia A, Jezewski M, Behar JA. A Review of Signal Processing Techniques for Non-Invasive Fetal Electrocardiography. IEEE Rev Biomed Eng 2019; 13:51-73. [PMID: 31478873 DOI: 10.1109/rbme.2019.2938061] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Fetal electrocardiography (fECG) is a promising alternative to cardiotocography continuous fetal monitoring. Robust extraction of the fetal signal from the abdominal mixture of maternal and fetal electrocardiograms presents the greatest challenge to effective fECG monitoring. This is mainly due to the low amplitude of the fetal versus maternal electrocardiogram and to the non-stationarity of the recorded signals. In this review, we highlight key developments in advanced signal processing algorithms for non-invasive fECG extraction and the available open access resources (databases and source code). In particular, we highlight the advantages and limitations of these algorithms as well as key parameters that must be set to ensure their optimal performance. Improving or combining the current or developing new advanced signal processing methods may enable morphological analysis of the fetal electrocardiogram, which today is only possible using the invasive scalp electrocardiography method.
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John RG, Ramachandran KI. Extraction of foetal ECG from abdominal ECG by nonlinear transformation and estimations. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2019; 175:193-204. [PMID: 31104707 DOI: 10.1016/j.cmpb.2019.04.022] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2019] [Revised: 04/13/2019] [Accepted: 04/20/2019] [Indexed: 06/09/2023]
Abstract
BACKGROUND AND OBJECTIVE This paper proposes a simple yet effective method for the extraction of foetal ECG from abdominal ECG which is necessary due to similar spatial and temporal content of mother and foetal ECG. METHODS The proposed algorithm for extraction of foetal ECG (fECG) from abdominal signal uses single channel. Pre-processing of abdominal ECG (abdECG) has been done to eliminate noise and condition the signal. The maternal ECG R-peaks have been detected based on thresholding, first order Gaussian differentiation and zero cross detection on pre-processed signal. Having identified R-peaks and pre-processed signal as base, using Maximum Likelihood Estimation, one beat including QRS complex morphology of maternal ECG (mECG) has been constructed. Extraction of maternal ECG from abdECG is done based on the constructed beat, R-peak locations and its corresponding QRS complex of abdECG. Extracted mECG has been cancelled from abdECG. This results in foetal ECG with residual noise. The noise has been reduced by Polynomial Approximation and Total Variation (PATV) to improve SNR. This approach ensures no loss of partially or completely overlapped fECG signals due to mECG removal. The algorithm is tested on three database namely daISy (DBI), Physiobank challenge 2013 (DBII) and abdominal and direct foetal ECG database (adfecgdb) of Physiobank (DBIII). RESULTS The algorithm detected no false positives or false negatives with certain channel for DBI, DBII and DBIII which shows that the proposed algorithm can achieve good performance. Overall accuracy and sensitivity of the system is 98.53% and 100% for DBI. Best accuracy and sensitivity of 97.77% and 98.63% are obtained for DBII. Best accuracy of 92.41% and sensitivity of 93.8% are obtained for DBIII. Correlation coefficient between actual foetal heart rate (fHR) and estimated fHR of 0.66 for DBII and 0.59 for DBIII is obtained. The method has obtained overall F1 score of 99.25% for DBI, 96.04% for DBII and 94.25% for DBIII. It has obtained a best MSE of fHR and overall MSE of R-R interval which is 10.8bpm2 and 2.2 ms for DBII, 12bpm2 and 2.14 ms for DBIII. CONCLUSION The results for different public databases show that the proposed method is capable of providing good results. The foetal QRS, R-peaks and R-R intervals have also been obtained in this method. Thus, it gives a significant contribution in the required area of research.
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Affiliation(s)
- Rolant Gini John
- Department of Electronics and Communication Engineering, Amrita School of Engineering, Coimbatore, Amrita Vishwa Vidyapeetham, India.
| | - K I Ramachandran
- Center for Computational Engineering & Networking (CEN), Amrita School of Engineering, Coimbatore, Amrita Vishwa Vidyapeetham, India
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Huque A, Ahmed K, Mukit M, Mostafa R. HMM-based Supervised Machine Learning Framework for the Detection of fECG R-R Peak Locations. Ing Rech Biomed 2019. [DOI: 10.1016/j.irbm.2019.04.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Gurve D, Krishnan S. Separation of Fetal-ECG From Single-Channel Abdominal ECG Using Activation Scaled Non-Negative Matrix Factorization. IEEE J Biomed Health Inform 2019; 24:669-680. [PMID: 31170084 DOI: 10.1109/jbhi.2019.2920356] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Performing a fetal electrocardiogram (ECG) analysis, which contains important information about the status of a fetal, can help to detect fetus health even before birth. Since the fetal ECG extracted from the ECG signal recorded from the mother's abdomen, this extraction problem can be seen as a source separation problem, of recovering source signals from signal mixtures. In this paper, a method for separation of fetal ECG from abdominal ECG using activation scaled non-negative matrix factorization (NMF) is proposed. The performance of the proposed method is also compared with independent component analysis. The proposed method is tested under three different scenarios. First, the original abdominal ECG signal is used for fetal separation. Second, the recovered abdominal ECG after compression is used for separation. Third, the fetal ECG is extracted from the compressed domain of the abdominal ECG. We applied scaling on the activation matrix obtained using NMF for emphasizing the fetal ECG present in abdominal ECG. The improved-regularized least-squares [Formula: see text] algorithm is used for signal reconstruction, which provides better reconstruction quality and less processing time in comparison with other existing methods. The proposed algorithm is evaluated and tested on real abdominal recordings obtained from two different datasets from Physionet. The first dataset used for this paper is Silesia dataset for abdominal and direct f-ECG, and the second dataset we considered is Set-A of the Physionet challenge. The obtained outcomes reveal that it is possible to separate fetal ECG from single-channel abdominal ECG signal, which can help us to achieve energy-efficient transmission, and cost-effective fetal ECG remote monitoring for Internet-of-Things applications, where device battery and computational capacity are limited.
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Fetal ECG extraction exploiting joint sparse supports in a dual dictionary framework. Biomed Signal Process Control 2019. [DOI: 10.1016/j.bspc.2018.08.023] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Jamshidian-Tehrani F, Sameni R. Fetal ECG extraction from time-varying and low-rank noninvasive maternal abdominal recordings. Physiol Meas 2018; 39:125008. [PMID: 30523836 DOI: 10.1088/1361-6579/aaef5d] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
OBJECTIVE Noninvasive fetal electrocardiography is emerging as a low-cost and high-accuracy technology for fetal cardiac monitoring. Signal processing techniques have been used over the past fifty years in this domain. The current major challenges of this domain, addressed in this study are (1) fetal electrocardiogram (fECG) extraction from few numbers of maternal abdominal channels in low signal-to-noise ratios; (2) online fECG extraction; (3) automatic and online signal quality assessment and channel selection; and (4) accurate and robust fetal R-peak detection and ECG parameter extraction. APPROACH Based on the theory of cyclostationarity, auxiliary maternal ECG channel(s) are synthetically constructed and augmented with the input channels. The augmented data are used to develop a robust multichannel source separation algorithm for online/offline fECG extraction, from as few as a single channel, and an accurate fetal R-peak detector using a two-pass matched filter. Several robust signal quality indexes (SQI) and a voting strategy are also proposed for automatic fetal signal quality assessment. MAIN RESULTS It is shown that the fECG and the fetal R-peaks can be accurately extracted from standard online available datasets, for which classical source separation methods (requiring many channels) had previously failed. The signal quality indexes fully automate the extraction and channel selection procedure. Finally, the proposed R-peak detector is highly robust to background noise and residual maternal R-peak components. SIGNIFICANCE The proposed methods for fECG extraction, R-peak detection and automatic channel selection are evaluated (visually and numerically), on two online available datasets and compared with recently developed algorithms. The proposed algorithm is statistically shown to outperform the benchmarks in terms of average and standard deviation.
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Fotiadou E, van Laar JOEH, Oei SG, Vullings R. Enhancement of low-quality fetal electrocardiogram based on time-sequenced adaptive filtering. Med Biol Eng Comput 2018; 56:2313-2323. [PMID: 29938302 PMCID: PMC6245004 DOI: 10.1007/s11517-018-1862-8] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2018] [Accepted: 06/10/2018] [Indexed: 12/05/2022]
Abstract
Extraction of a clean fetal electrocardiogram (ECG) from non-invasive abdominal recordings is one of the biggest challenges in fetal monitoring. An ECG allows for the interpretation of the electrical heart activity beyond the heart rate and heart rate variability. However, the low signal quality of the fetal ECG hinders the morphological analysis of its waveform in clinical practice. The time-sequenced adaptive filter has been proposed for performing optimal time-varying filtering of non-stationary signals having a recurring statistical character. In our study, the time-sequenced adaptive filter is applied to enhance the quality of multichannel fetal ECG after the maternal ECG is removed. To improve the performance of the filter in cases of low signal-to-noise ratio (SNR), we enhance the ECG reference signals by averaging consecutive ECG complexes. The performance of the proposed augmented time-sequenced adaptive filter is evaluated in both synthetic and real data from PhysioNet. This evaluation shows that the suggested algorithm clearly outperforms other ECG enhancement methods, in terms of uncovering the ECG waveform, even in cases with very low SNR. With the presented method, quality of the fetal ECG morphology can be enhanced to the extent that the ECG might be fit for use in clinical diagnostics. The extracted fetal ECG signals from non-invasive abdominal recordings still contain a substantial amount of noise. The time-sequenced adaptive filter provides a relatively accurate estimate of the underlying fetal ECG signal when the quality of the reference channels is enhanced prior to filtering. ![]()
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Affiliation(s)
- E Fotiadou
- Department of Electrical Engineering, Eindhoven University of Technology, 5612 AP, Eindhoven, Netherlands.
| | - J O E H van Laar
- Department of Obstetrics and Gynaecology, Máxima Medical Center, 5504 DB, Veldhoven, Netherlands
| | - S G Oei
- Department of Obstetrics and Gynaecology, Máxima Medical Center, 5504 DB, Veldhoven, Netherlands
| | - R Vullings
- Department of Electrical Engineering, Eindhoven University of Technology, 5612 AP, Eindhoven, Netherlands
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Castillo E, Morales DP, García A, Parrilla L, Ruiz VU, Álvarez-Bermejo JA. A clustering-based method for single-channel fetal heart rate monitoring. PLoS One 2018; 13:e0199308. [PMID: 29933366 PMCID: PMC6014640 DOI: 10.1371/journal.pone.0199308] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2017] [Accepted: 06/05/2018] [Indexed: 11/29/2022] Open
Abstract
Non-invasive fetal electrocardiography (ECG) is based on the acquisition of signals from abdominal surface electrodes. The composite abdominal signal consists of the maternal electrocardiogram along with the fetal electrocardiogram and other electrical interferences. These recordings allow for the acquisition of valuable and reliable information that helps ensure fetal well-being during pregnancy. This paper introduces a procedure for fetal heart rate extraction from a single-channel abdominal ECG signal. The procedure is composed of three main stages: a method based on wavelet for signal denoising, a new clustering-based methodology for detecting fetal QRS complexes, and a final stage to correct false positives and false negatives. The novelty of the procedure thus relies on using clustering techniques to classify singularities from the abdominal ECG into three types: maternal QRS complexes, fetal QRS complexes, and noise. The amplitude and time distance of all the local maxima followed by a local minimum were selected as features for the clustering classification. A wide set of real abdominal ECG recordings from two different databases, providing a large range of different characteristics, was used to illustrate the efficiency of the proposed method. The accuracy achieved shows that the proposed technique exhibits a competitve performance when compared to other recent works in the literature and a better performance over threshold-based techniques.
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Affiliation(s)
- Encarnación Castillo
- Department of Electronics and Computer Technology, Campus Universitario Fuentenueva, University of Granada, Granada, Spain
- * E-mail:
| | - Diego P. Morales
- Department of Electronics and Computer Technology, Campus Universitario Fuentenueva, University of Granada, Granada, Spain
| | - Antonio García
- Department of Electronics and Computer Technology, Campus Universitario Fuentenueva, University of Granada, Granada, Spain
| | - Luis Parrilla
- Department of Electronics and Computer Technology, Campus Universitario Fuentenueva, University of Granada, Granada, Spain
| | - Víctor U. Ruiz
- Department of Electronics and Computer Technology, Campus Universitario Fuentenueva, University of Granada, Granada, Spain
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Parameter Estimation of SAR Signal Based on SVD for the Nyquist Folding Receiver. SENSORS 2018; 18:s18061768. [PMID: 29857587 PMCID: PMC6021933 DOI: 10.3390/s18061768] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/27/2018] [Revised: 05/20/2018] [Accepted: 05/27/2018] [Indexed: 11/29/2022]
Abstract
The Nyquist Folding Receiver (NYFR) is a novel ultra-wideband (UWB) receiver structure that can realize wideband signal monitoring with fewer components. The NYFR induces a Nyquist zone (NZ)-dependent sinusoidal frequency modulation (SFM) by a modulated local oscillator (LOS), and the intercepted linear frequency modulated (LFM) synthetic aperture radar (SAR) signal will be converted into an LFM/SFM hybrid modulated signal. In this paper, a parameter estimation algorithm is proposed for the complicated NYFR output signal. According to the NYFR prior information, a chirp singular value ratio (CSVR) spectrum method based on singular value decomposition (SVD) is proposed to estimate the chirp rate directly before estimating the NZ index. Then, a fast search algorithm based on golden section method for the CSVR spectrum is analyzed, which can obviously reduce the computational complexity. The simulation shows that the presented algorithm can accurately estimate the parameters of the LFM/SFM hybrid modulated output signal by the NYFR.
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Martinek R, Kahankova R, Jezewski J, Jaros R, Mohylova J, Fajkus M, Nedoma J, Janku P, Nazeran H. Comparative Effectiveness of ICA and PCA in Extraction of Fetal ECG From Abdominal Signals: Toward Non-invasive Fetal Monitoring. Front Physiol 2018; 9:648. [PMID: 29899707 PMCID: PMC5988877 DOI: 10.3389/fphys.2018.00648] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2017] [Accepted: 05/11/2018] [Indexed: 01/15/2023] Open
Abstract
Non-adaptive signal processing methods have been successfully applied to extract fetal electrocardiograms (fECGs) from maternal abdominal electrocardiograms (aECGs); and initial tests to evaluate the efficacy of these methods have been carried out by using synthetic data. Nevertheless, performance evaluation of such methods using real data is a much more challenging task and has neither been fully undertaken nor reported in the literature. Therefore, in this investigation, we aimed to compare the effectiveness of two popular non-adaptive methods (the ICA and PCA) to explore the non-invasive (NI) extraction (separation) of fECGs, also known as NI-fECGs from aECGs. The performance of these well-known methods was enhanced by an adaptive algorithm, compensating amplitude difference and time shift between the estimated components. We used real signals compiled in 12 recordings (real01-real12). Five of the recordings were from the publicly available database (PhysioNet-Abdominal and Direct Fetal Electrocardiogram Database), which included data recorded by multiple abdominal electrodes. Seven more recordings were acquired by measurements performed at the Institute of Medical Technology and Equipment, Zabrze, Poland. Therefore, in total we used 60 min of data (i.e., around 88,000 R waves) for our experiments. This dataset covers different gestational ages, fetal positions, fetal positions, maternal body mass indices (BMI), etc. Such a unique heterogeneous dataset of sufficient length combining continuous Fetal Scalp Electrode (FSE) acquired and abdominal ECG recordings allows for robust testing of the applied ICA and PCA methods. The performance of these signal separation methods was then comprehensively evaluated by comparing the fetal Heart Rate (fHR) values determined from the extracted fECGs with those calculated from the fECG signals recorded directly by means of a reference FSE. Additionally, we tested the possibility of non-invasive ST analysis (NI-STAN) by determining the T/QRS ratio. Our results demonstrated that even though these advanced signal processing methods are suitable for the non-invasive estimation and monitoring of the fHR information from maternal aECG signals, their utility for further morphological analysis of the extracted fECG signals remains questionable and warrants further work.
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Affiliation(s)
- Radek Martinek
- Department of Cybernetics and Biomedical Engineering, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, Ostrava, Czechia
| | - Radana Kahankova
- Department of Cybernetics and Biomedical Engineering, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, Ostrava, Czechia
| | - Janusz Jezewski
- Institute of Medical Technology and Equipment ITAM, Zabrze, Poland
| | - Rene Jaros
- Department of Cybernetics and Biomedical Engineering, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, Ostrava, Czechia
| | - Jitka Mohylova
- Department of General Electrical Engineering, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, Ostrava, Czechia
| | - Marcel Fajkus
- Department of Telecommunications, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, Ostrava, Czechia
| | - Jan Nedoma
- Department of Telecommunications, Faculty of Electrical Engineering and Computer Science, VSB-Technical University of Ostrava, Ostrava, Czechia
| | - Petr Janku
- Department of Obstetrics and Gynecology, Masaryk University and University Hospital Brno, Brno, Czechia
| | - Homer Nazeran
- Department of Electrical and Computer Engineering, University of Texas El Paso, El Paso, TX, United States
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Zhong W, Liao L, Guo X, Wang G. A deep learning approach for fetal QRS complex detection. Physiol Meas 2018; 39:045004. [DOI: 10.1088/1361-6579/aab297] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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Shen C, Frasch MG, Wu HT, Herry CL, Cao M, Desrochers A, Fecteau G, Burns P. Non-invasive acquisition of fetal ECG from the maternal xyphoid process: a feasibility study in pregnant sheep and a call for open data sets. Physiol Meas 2018; 39:035005. [PMID: 29369821 DOI: 10.1088/1361-6579/aaaaa4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
OBJECTIVE The utility of fetal heart rate (FHR) monitoring can only be achieved with an acquisition sampling rate that preserves the underlying physiological information on the millisecond time scale (1000 Hz rather than 4 Hz). For such acquisition, fetal ECG (fECG) is required, rather than the ultrasound to derive FHR. We tested one recently developed algorithm, SAVER, and two widely applied algorithms to extract fECG from a single-channel maternal ECG signal recorded over the xyphoid process rather than the routine abdominal signal. APPROACH At 126dG, ECG was attached to near-term ewe and fetal shoulders, manubrium and xyphoid processes (n = 12). fECG served as the ground-truth to which the fetal ECG signal extracted from the simultaneously-acquired maternal ECG was compared. All fetuses were in good health during surgery (pH 7.29 ± 0.03, pO2 33.2 ± 8.4, pCO2 56.0 ± 7.8, O2Sat 78.3 ± 7.6, lactate 2.8 ± 0.6, BE -0.3 ± 2.4). MAIN RESULT In all animals, single lead fECG extraction algorithm could not extract fECG from the maternal ECG signal over the xyphoid process with the F1 less than 50%. SIGNIFICANCE The applied fECG extraction algorithms might be unsuitable for the maternal ECG signal over the xyphoid process, or the latter does not contain strong enough fECG signal, although the lead is near the mother's abdomen. Fetal sheep model is widely used to mimic various fetal conditions, yet ECG recordings in a public data set form are not available to test the predictive ability of fECG and FHR. We are making this data set openly available to other researchers to foster non-invasive fECG acquisition in this animal model.
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Affiliation(s)
- C Shen
- Mathematics, Duke University, Durham NC, United States of America
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39
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Quantification of Feto-Maternal Heart Rate from Abdominal ECG Signal Using Empirical Mode Decomposition for Heart Rate Variability Analysis. TECHNOLOGIES 2017. [DOI: 10.3390/technologies5040068] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Ibrahim EA, Al Awar S, Balayah ZH, Hadjileontiadis LJ, Khandoker AH. A Comparative Study on Fetal Heart Rates Estimated from Fetal Phonography and Cardiotocography. Front Physiol 2017; 8:764. [PMID: 29089896 PMCID: PMC5651042 DOI: 10.3389/fphys.2017.00764] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2017] [Accepted: 09/19/2017] [Indexed: 11/13/2022] Open
Abstract
The aim of this study is to investigate that fetal heart rates (fHR) extracted from fetal phonocardiography (fPCG) could convey similar information of fHR from cardiotocography (CTG). Four-channel fPCG sensors made of low cost (<$1) ceramic piezo vibration sensor within 3D-printed casings were used to collect abdominal phonogram signals from 20 pregnant mothers (>34 weeks of gestation). A novel multi-lag covariance matrix-based eigenvalue decomposition technique was used to separate maternal breathing, fetal heart sounds (fHS) and maternal heart sounds (mHS) from abdominal phonogram signals. Prior to the fHR estimation, the fPCG signals were denoised using a multi-resolution wavelet-based filter. The proposed source separation technique was first tested in separating sources from synthetically mixed signals and then on raw abdominal phonogram signals. fHR signals extracted from fPCG signals were validated using simultaneous recorded CTG-based fHR recordings.The experimental results have shown that the fHR derived from the acquired fPCG can be used to detect periods of acceleration and deceleration, which are critical indication of the fetus' well-being. Moreover, a comparative analysis demonstrated that fHRs from CTG and fPCG signals were in good agreement (Bland Altman plot has mean = -0.21 BPM and ±2 SD = ±3) with statistical significance (p < 0.001 and Spearman correlation coefficient ρ = 0.95). The study findings show that fHR estimated from fPCG could be a reliable substitute for fHR from the CTG, opening up the possibility of a low cost monitoring tool for fetal well-being.
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Affiliation(s)
- Emad A. Ibrahim
- Department of Electrical and Computer Engineering, Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates
| | - Shamsa Al Awar
- Department of Obstetrics and Gynaecology, College of Medicine and Health Science, UAE University, Al Ain, United Arab Emirates
| | - Zuhur H. Balayah
- Department of Obstetrics and Gynaecology, College of Medicine and Health Science, UAE University, Al Ain, United Arab Emirates
| | - Leontios J. Hadjileontiadis
- Department of Electrical and Computer Engineering, Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates
- Department of Electrical and Computer Engineering, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Ahsan H. Khandoker
- Department of Biomedical Engineering, Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates
- Department of Electrical and Electronic Engineering, University of Melbourne, Parkville, VIC, Australia
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41
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A Combined Independent Source Separation and Quality Index Optimization Method for Fetal ECG Extraction from Abdominal Maternal Leads. SENSORS 2017; 17:s17051135. [PMID: 28509860 PMCID: PMC5470811 DOI: 10.3390/s17051135] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/21/2017] [Revised: 05/06/2017] [Accepted: 05/11/2017] [Indexed: 11/21/2022]
Abstract
The non-invasive fetal electrocardiogram (fECG) technique has recently received considerable interest in monitoring fetal health. The aim of our paper is to propose a novel fECG algorithm based on the combination of the criteria of independent source separation and of a quality index optimization (ICAQIO-based). The algorithm was compared with two methods applying the two different criteria independently—the ICA-based and the QIO-based methods—which were previously developed by our group. All three methods were tested on the recently implemented Fetal ECG Synthetic Database (FECGSYNDB). Moreover, the performance of the algorithm was tested on real data from the PhysioNet fetal ECG Challenge 2013 Database. The proposed combined method outperformed the other two algorithms on the FECGSYNDB (ICAQIO-based: 98.78%, QIO-based: 97.77%, ICA-based: 97.61%). Significant differences were obtained in particular in the conditions when uterine contractions and maternal and fetal ectopic beats occurred. On the real data, all three methods obtained very high performances, with the QIO-based method proving slightly better than the other two (ICAQIO-based: 99.38%, QIO-based: 99.76%, ICA-based: 99.37%). The findings from this study suggest that the proposed method could potentially be applied as a novel algorithm for accurate extraction of fECG, especially in critical recording conditions.
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42
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Li R, Frasch MG, Wu HT. Efficient Fetal-Maternal ECG Signal Separation from Two Channel Maternal Abdominal ECG via Diffusion-Based Channel Selection. Front Physiol 2017; 8:277. [PMID: 28559848 PMCID: PMC5432652 DOI: 10.3389/fphys.2017.00277] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2017] [Accepted: 04/18/2017] [Indexed: 12/19/2022] Open
Abstract
There is a need for affordable, widely deployable maternal-fetal ECG monitors to improve maternal and fetal health during pregnancy and delivery. Based on the diffusion-based channel selection, here we present the mathematical formalism and clinical validation of an algorithm capable of accurate separation of maternal and fetal ECG from a two channel signal acquired over maternal abdomen. The proposed algorithm is the first algorithm, to the best of the authors' knowledge, focusing on the fetal ECG analysis based on two channel maternal abdominal ECG signal, and we apply it to two publicly available databases, the PhysioNet non-invasive fECG database (adfecgdb) and the 2013 PhysioNet/Computing in Cardiology Challenge (CinC2013), to validate the algorithm. The state-of-the-art results are achieved when compared with other available algorithms. Particularly, the F1 score for the R peak detection achieves 99.3% for the adfecgdb and 87.93% for the CinC2013, and the mean absolute error for the estimated R peak locations is 4.53 ms for the adfecgdb and 6.21 ms for the CinC2013. The method has the potential to be applied to other fetal cardiogenic signals, including cardiac doppler signals.
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Affiliation(s)
- Ruilin Li
- Department of Mathematics, University of TorontoToronto, ON, Canada
| | - Martin G Frasch
- Department of Obstetrics and Gynecology, University of WashingtonSeattle, USA
| | - Hau-Tieng Wu
- Department of Mathematics, University of TorontoToronto, ON, Canada.,Mathematics Division, National Center for Theoretical SciencesTaipei, Taiwan
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Ahmadieh H, Asl BM. Fetal ECG extraction via Type-2 adaptive neuro-fuzzy inference systems. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2017; 142:101-108. [PMID: 28325438 DOI: 10.1016/j.cmpb.2017.02.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2016] [Revised: 01/29/2017] [Accepted: 02/09/2017] [Indexed: 06/06/2023]
Abstract
BACKGROUND AND OBJECTIVE We proposed a noninvasive method for separating the fetal ECG (FECG) from maternal ECG (MECG) by using Type-2 adaptive neuro-fuzzy inference systems. METHODS The method can extract FECG components from abdominal signal by using one abdominal channel, including maternal and fetal cardiac signals and other environmental noise signals, and one chest channel. The proposed algorithm detects the nonlinear dynamics of the mother's body. So, the components of the MECG are estimated from the abdominal signal. By subtracting estimated mother cardiac signal from abdominal signal, fetal cardiac signal can be extracted. This algorithm was applied on synthetic ECG signals generated based on the models developed by McSharry et al. and Behar et al. and also on DaISy real database. RESULTS In environments with high uncertainty, our method performs better than the Type-1 fuzzy method. Specifically, in evaluation of the algorithm with the synthetic data based on McSharry model, for input signals with SNR of -5dB, the SNR of the extracted FECG was improved by 38.38% in comparison with the Type-1 fuzzy method. Also, the results show that increasing the uncertainty or decreasing the input SNR leads to increasing the percentage of the improvement in SNR of the extracted FECG. For instance, when the SNR of the input signal decreases to -30dB, our proposed algorithm improves the SNR of the extracted FECG by 71.06% with respect to the Type-1 fuzzy method. The same results were obtained on synthetic data based on Behar model. Our results on real database reflect the success of the proposed method to separate the maternal and fetal heart signals even if their waves overlap in time. Moreover, the proposed algorithm was applied to the simulated fetal ECG with ectopic beats and achieved good results in separating FECG from MECG. CONCLUSIONS The results show the superiority of the proposed Type-2 neuro-fuzzy inference method over the Type-1 neuro-fuzzy inference and the polynomial networks methods, which is due to its capability to capture the nonlinearities of the model better.
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Affiliation(s)
- Hajar Ahmadieh
- Department of Electrical and Computer Engineering, Tarbiat Modares University, Tehran, Iran
| | - Babak Mohammadzadeh Asl
- Department of Electrical and Computer Engineering, Tarbiat Modares University, Tehran, Iran.
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44
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Zhang N, Zhang J, Li H, Mumini OO, Samuel OW, Ivanov K, Wang L. A Novel Technique for Fetal ECG Extraction Using Single-Channel Abdominal Recording. SENSORS 2017; 17:s17030457. [PMID: 28245585 PMCID: PMC5375743 DOI: 10.3390/s17030457] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/01/2016] [Revised: 01/16/2017] [Accepted: 02/16/2017] [Indexed: 11/16/2022]
Abstract
Non-invasive fetal electrocardiograms (FECGs) are an alternative method to standard means of fetal monitoring which permit long-term continual monitoring. However, in abdominal recording, the FECG amplitude is weak in the temporal domain and overlaps with the maternal electrocardiogram (MECG) in the spectral domain. Research in the area of non-invasive separations of FECG from abdominal electrocardiograms (AECGs) is in its infancy and several studies are currently focusing on this area. An adaptive noise canceller (ANC) is commonly used for cancelling interference in cases where the reference signal only correlates with an interference signal, and not with a signal of interest. However, results from some existing studies suggest that propagation of electrocardiogram (ECG) signals from the maternal heart to the abdomen is nonlinear, hence the adaptive filter approach may fail if the thoracic and abdominal MECG lack strict waveform similarity. In this study, singular value decomposition (SVD) and smooth window (SW) techniques are combined to build a reference signal in an ANC. This is to avoid the limitation that thoracic MECGs recorded separately must be similar to abdominal MECGs in waveform. Validation of the proposed method with r01 and r07 signals from a public dataset, and a self-recorded private dataset showed that the proposed method achieved F1 scores of 99.61%, 99.28% and 98.58%, respectively for the detection of fetal QRS. Compared with four other single-channel methods, the proposed method also achieved higher accuracy values of 99.22%, 98.57% and 97.21%, respectively. The findings from this study suggest that the proposed method could potentially aid accurate extraction of FECG from MECG recordings in both clinical and commercial applications.
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Affiliation(s)
- Nannan Zhang
- Shenzhen Institues of Adavanced Technology, Chinese Academy of Science, Shenzhen 518055, China.
| | - Jinyong Zhang
- Shenzhen Institues of Adavanced Technology, Chinese Academy of Science, Shenzhen 518055, China.
- Department of Electrical and Electronic Engineering, The University of Hong Kong, Hong Kong 9990779, China.
| | - Hui Li
- Shenzhen Institues of Adavanced Technology, Chinese Academy of Science, Shenzhen 518055, China.
| | - Omisore Olatunji Mumini
- Shenzhen Institues of Adavanced Technology, Chinese Academy of Science, Shenzhen 518055, China.
- Shenzhen College of Advanced Technology, University of Chinese Academy of Sciences, Shenzhen 518055, China.
| | - Oluwarotimi Williams Samuel
- Shenzhen Institues of Adavanced Technology, Chinese Academy of Science, Shenzhen 518055, China.
- Shenzhen College of Advanced Technology, University of Chinese Academy of Sciences, Shenzhen 518055, China.
| | - Kamen Ivanov
- Shenzhen Institues of Adavanced Technology, Chinese Academy of Science, Shenzhen 518055, China.
- Shenzhen College of Advanced Technology, University of Chinese Academy of Sciences, Shenzhen 518055, China.
| | - Lei Wang
- Shenzhen Institues of Adavanced Technology, Chinese Academy of Science, Shenzhen 518055, China.
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Extraction of fetal ECG signal by an improved method using extended Kalman smoother framework from single channel abdominal ECG signal. AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2017; 40:191-207. [PMID: 28210991 DOI: 10.1007/s13246-017-0527-5] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2016] [Accepted: 01/16/2017] [Indexed: 10/20/2022]
Abstract
This paper proposes a five-stage based methodology to extract the fetal electrocardiogram (FECG) from the single channel abdominal ECG using differential evolution (DE) algorithm, extended Kalman smoother (EKS) and adaptive neuro fuzzy inference system (ANFIS) framework. The heart rate of the fetus can easily be detected after estimation of the fetal ECG signal. The abdominal ECG signal contains fetal ECG signal, maternal ECG component, and noise. To estimate the fetal ECG signal from the abdominal ECG signal, removal of the noise and the maternal ECG component presented in it is necessary. The pre-processing stage is used to remove the noise from the abdominal ECG signal. The EKS framework is used to estimate the maternal ECG signal from the abdominal ECG signal. The optimized parameters of the maternal ECG components are required to develop the state and measurement equation of the EKS framework. These optimized maternal ECG parameters are selected by the differential evolution algorithm. The relationship between the maternal ECG signal and the available maternal ECG component in the abdominal ECG signal is nonlinear. To estimate the actual maternal ECG component present in the abdominal ECG signal and also to recognize this nonlinear relationship the ANFIS is used. Inputs to the ANFIS framework are the output of EKS and the pre-processed abdominal ECG signal. The fetal ECG signal is computed by subtracting the output of ANFIS from the pre-processed abdominal ECG signal. Non-invasive fetal ECG database and set A of 2013 physionet/computing in cardiology challenge database (PCDB) are used for validation of the proposed methodology. The proposed methodology shows a sensitivity of 94.21%, accuracy of 90.66%, and positive predictive value of 96.05% from the non-invasive fetal ECG database. The proposed methodology also shows a sensitivity of 91.47%, accuracy of 84.89%, and positive predictive value of 92.18% from the set A of PCDB.
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46
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Tsui SY, Liu CS, Lin CW. Modified maternal ECG cancellation for portable fetal heart rate monitor. Biomed Signal Process Control 2017. [DOI: 10.1016/j.bspc.2016.11.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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47
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Paradkar N, Chowdhury SR. Primary study for detection of arterial blood pressure waveform components. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2015:1959-62. [PMID: 26736668 DOI: 10.1109/embc.2015.7318768] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The paper presents a technique to detect significant systolic peaks, the percussion (P) and tidal peak (T) and diastolic peak (D) from the arterial blood pressure (ABP) waveform. The technique is aimed at robust detection even in presence of significant noise. Singular Value Decomposition (SVD) based dominant period extraction of the ABP waveform followed by wavelet transform and local peak detection is applied to detect the points of interest. MIMIC-II ABP databse serves as a training dataset to select SVD and wavelet transform parameters and CSL Benchmark database is used to analyze the technique. Salient systolic peak detection for the CSL dataset was performed with positive predictive value and sensitivity figures of 98.48% and 99.24% respectively.
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A Fetal Electrocardiogram Signal Extraction Algorithm Based on Fast One-Unit Independent Component Analysis with Reference. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2016; 2016:5127978. [PMID: 27703492 PMCID: PMC5040836 DOI: 10.1155/2016/5127978] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/10/2016] [Accepted: 08/08/2016] [Indexed: 11/24/2022]
Abstract
Fetal electrocardiogram (FECG) extraction is very important procedure for fetal health assessment. In this article, we propose a fast one-unit independent component analysis with reference (ICA-R) that is suitable to extract the FECG. Most previous ICA-R algorithms only focused on how to optimize the cost function of the ICA-R and payed little attention to the improvement of cost function. They did not fully take advantage of the prior information about the desired signal to improve the ICA-R. In this paper, we first use the kurtosis information of the desired FECG signal to simplify the non-Gaussian measurement function and then construct a new cost function by directly using a nonquadratic function of the extracted signal to measure its non-Gaussianity. The new cost function does not involve the computation of the difference between the function of the Gaussian random vector and that of the extracted signal, which is time consuming. Centering and whitening are also used to preprocess the observed signal to further reduce the computation complexity. While the proposed method has the same error performance as other improved one-unit ICA-R methods, it actually has lower computation complexity than those other methods. Simulations are performed separately on artificial and real-world electrocardiogram signals.
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Qiu Z, Wang P, Zhu J, Tang B. A parameter estimation algorithm for LFM/BPSK hybrid modulated signal intercepted by Nyquist folding receiver. EURASIP JOURNAL ON ADVANCES IN SIGNAL PROCESSING 2016; 2016:90. [PMID: 27594883 PMCID: PMC4990610 DOI: 10.1186/s13634-016-0387-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Accepted: 08/09/2016] [Indexed: 06/06/2023]
Abstract
Nyquist folding receiver (NYFR) is a novel ultra-wideband receiver architecture which can realize wideband receiving with a small amount of equipment. Linear frequency modulated/binary phase shift keying (LFM/BPSK) hybrid modulated signal is a novel kind of low probability interception signal with wide bandwidth. The NYFR is an effective architecture to intercept the LFM/BPSK signal and the LFM/BPSK signal intercepted by the NYFR will add the local oscillator modulation. A parameter estimation algorithm for the NYFR output signal is proposed. According to the NYFR prior information, the chirp singular value ratio spectrum is proposed to estimate the chirp rate. Then, based on the output self-characteristic, matching component function is designed to estimate Nyquist zone (NZ) index. Finally, matching code and subspace method are employed to estimate the phase change points and code length. Compared with the existing methods, the proposed algorithm has a better performance. It also has no need to construct a multi-channel structure, which means the computational complexity for the NZ index estimation is small. The simulation results demonstrate the efficacy of the proposed algorithm.
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Affiliation(s)
- Zhaoyang Qiu
- School of Electronic Engineering, University of Electronic Science and Technology of China, Chengdu, China
| | - Pei Wang
- School of Electronic Engineering, University of Electronic Science and Technology of China, Chengdu, China
| | - Jun Zhu
- School of Electronic Engineering, University of Electronic Science and Technology of China, Chengdu, China
| | - Bin Tang
- School of Electronic Engineering, University of Electronic Science and Technology of China, Chengdu, China
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Lee KJ, Lee B. Sequential Total Variation Denoising for the Extraction of Fetal ECG from Single-Channel Maternal Abdominal ECG. SENSORS 2016; 16:s16071020. [PMID: 27376296 PMCID: PMC4970070 DOI: 10.3390/s16071020] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/27/2016] [Revised: 06/24/2016] [Accepted: 06/29/2016] [Indexed: 11/16/2022]
Abstract
Fetal heart rate (FHR) is an important determinant of fetal health. Cardiotocography (CTG) is widely used for measuring the FHR in the clinical field. However, fetal movement and blood flow through the maternal blood vessels can critically influence Doppler ultrasound signals. Moreover, CTG is not suitable for long-term monitoring. Therefore, researchers have been developing algorithms to estimate the FHR using electrocardiograms (ECGs) from the abdomen of pregnant women. However, separating the weak fetal ECG signal from the abdominal ECG signal is a challenging problem. In this paper, we propose a method for estimating the FHR using sequential total variation denoising and compare its performance with that of other single-channel fetal ECG extraction methods via simulation using the Fetal ECG Synthetic Database (FECGSYNDB). Moreover, we used real data from PhysioNet fetal ECG databases for the evaluation of the algorithm performance. The R-peak detection rate is calculated to evaluate the performance of our algorithm. Our approach could not only separate the fetal ECG signals from the abdominal ECG signals but also accurately estimate the FHR.
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Affiliation(s)
- Kwang Jin Lee
- Department of Biomedical Science and Engineering (BMSE), Institute of Integrated Technology (IIT), Gwangju Institute of Science and Technology (GIST), Gwangju 61005, Korea.
| | - Boreom Lee
- Department of Biomedical Science and Engineering (BMSE), Institute of Integrated Technology (IIT), Gwangju Institute of Science and Technology (GIST), Gwangju 61005, Korea.
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