Ovarian ultrasound image analysis: follicle segmentation

Ultrasound-based geometric modeling of the human ovary with applications to cryopreservation

Successful cryopreservation of the whole ovary outside of the body, while a woman undergoes cancer treatments, may help preserving fertility and regaining hormone balance during recovery. One of the key challenges in whole ovary cryopreservation is adequately loading the organ with cryoprotective agents (CPAs). Another notable challenge in developing the application is the lack of geometric data needed for designing matching thermal protocols. The objective of the current study is twofold: (i) to develop an effective geometric reconstruction method for the ovary, based on transvaginal ultrasound (TVUS) data, and (ii) to perform a pilot study on the thermal effects associated with CPA loading with application to vitrification. This study includes screening of 127 TVUS imaging datasets of ovaries from healthy ovulatory participants, reconstruction of 14 geometric models, and thermally analyzing two representative geometric models of low and high mature follicles-to-organ volume ratios. Results of this study demonstrate that the proposed reconstruction method is faster and more accurate than that facilitated by commercially available software (SonoAVC, GE Healthcare). Two extremes were investigated: (1) complete vitrification of the ovary, and (2) crystallization of mature follicles while the remaining ovarian stroma vitrifies. CPA loading into the mature follicles is considered an outstanding cryopreservation challenge, but with very little impact on long-term fertility preservation. Results of this study suggest that ovarian preservation by vitrification is feasible when sufficient CPA loading is achieved, while identifying the most suitable CPA for the task remains a challenge beyond the scope of the current study.

Inter-software reliability and agreement for follicular and luteal morphometric and echotextural ultrasonographic parameters in beef cattle

This study aimed to compare the inter-software and inter-observer reliability and agreement for the assessment of follicular and luteal morphometry and echotexture parameters in beef crossbreed females (3/8 Bos taurus indicus and 5/8 Bos taurus taurus). B-mode and color Doppler ultrasonographic ovarian images were obtained at specific time points of estradiol-progesterone-based protocols for timed artificial insemination (TAI). Sonograms were analyzed by two observers using a licensed (IASP1) and an open access (IASP2) software package. A total of 292 snap-shot sonograms were analyzed for morphometric parameters and 504 for echotexture parameters. inter-software reliability was judged moderate to excellent (ICC or CCC=0.73-0.98), whereas inter-observer reliability for morphometric parameters was deemed good to excellent (ICC or CCC=0.82-0.98). A small percentage (up to 10.95 %) of measured parameters fell outside the limits of inter-software and inter-observer agreement. For echotexture parameters, inter-software reliability varied widely (ICC or CCC=0.16-0.95) based on the size of regions of interest (ROI), while inter-observer reliability ranged from moderate to excellent (ICC or CCC= 0.71-0.97). The highest inter-software reliability for pixel value and heterogeneity value was observed for the corpus luteum (ICCs=0.81-0.95; P>0.05), followed by the peripheral follicular antrum (ICCs=0.75-0.78; P<0.05). However, lower reliability was determined for the follicular wall (ICCs=0.08-0.33; P<0.0001) and perifollicular stroma (ICCs=0.16-0.46; P<0.05). In conclusion, both software packages showed high reproducibility for morphometric measurements, while echotexture measurements were more challenging to replicate based on ROI sizes. Caution is advised when selecting ROI sizes for echotexture measurements in bovine ovaries.

Uncertainty-aware refinement framework for ovarian tumor segmentation in CECT volume

BACKGROUND

Ovarian cancer is a highly lethal gynecological disease. Accurate and automated segmentation of ovarian tumors in contrast-enhanced computed tomography (CECT) images is crucial in the radiotherapy treatment of ovarian cancer, enabling radiologists to evaluate cancer progression and develop timely therapeutic plans. However, automatic ovarian tumor segmentation is challenging due to factors such as inhomogeneous background, ambiguous tumor boundaries, and imbalanced foreground-background, all of which contribute to high predictive uncertainty for a segmentation model.

PURPOSE

To tackle these challenges, we propose an uncertainty-aware refinement framework that aims to estimate and refine regions with high predictive uncertainty for accurate ovarian tumor segmentation in CECT images.

METHODS

To this end, we first employ an approximate Bayesian network to detect coarse regions of interest (ROIs) of both ovarian tumors and uncertain regions. These ROIs allow a subsequent segmentation network to narrow down the search area for tumors and prioritize uncertain regions, resulting in precise segmentation of ovarian tumors. Meanwhile, the framework integrates two guidance modules that learn two implicit functions capable of mapping query features sampled according to their uncertainty to organ or boundary manifolds, guiding the segmentation network to facilitate information encoding of uncertain regions.

RESULTS

Firstly, 367 CECT images are collected from the same hospital for experiments. Dice score, Jaccard, Recall, Positive predictive value (PPV), 95% Hausdorff distance (HD95) and Average symmetric surface distance (ASSD) for the testing group of 77 cases are 86.31%, 73.93%, 83.95%, 86.03%, 15.17  mm and 2.57  mm, all of which are significantly better than that of the other state-of-the-art models. And results of visual comparison shows that the compared methods have more mis-segmentation than our method. Furthermore, our method achieves a Dice score that is at least 20% higher than the Dice scores of other compared methods when tumor volumes are less than 20 cm3 $^3$ , indicating better recognition ability to small regions by our method. And then, 38 CECT images are collected from another hospital to form an external testing group. Our approach consistently outperform the compared methods significantly, with the external testing group exhibiting substantial improvements across key evaluation metrics: Dice score (83.74%), Jaccard (69.55%), Recall (82.12%), PPV (81.61%), HD95 (12.31 mm), and ASSD (2.32 mm), robustly establishing its superior performance.

CONCLUSIONS

Experimental results demonstrate that the framework significantly outperforms the compared state-of-the-art methods, with decreased under- or over-segmentation and better small tumor identification. It has the potential for clinical application.

Automatic segmentation of ovarian follicles using deep neural network combined with edge information

Medical ultrasound imaging plays an important role in computer-aided diagnosis systems. In many cases, it is the preferred method of doctors for diagnosing diseases. Combined with computer vision technology, segmentation of ovarian ultrasound images can help doctors accurately judge diseases, reduce doctors' workload, and improve doctors' work efficiency. However, accurate segmentation of an ovarian ultrasound image is a challenging task. On the one hand, there is a lot of speckle noise in ultrasound images; on the other hand, the edges of objects are blurred in ultrasound images. In order to segment the target accurately, we propose an ovarian follicles segmentation network combined with edge information. By adding an edge detection branch at the end of the network and taking the edge detection results as one of the losses of the network, we can accurately segment the ovarian follicles in an ultrasound image, making the segmentation results finer on the edge. Experiments show that the proposed network improves the segmentation accuracy of ovarian follicles, and that it has advantages over current algorithms.

Contrastive rendering with semi-supervised learning for ovary and follicle segmentation from 3D ultrasound

Segmentation of ovary and follicles from 3D ultrasound (US) is the crucial technique of measurement tools for female infertility diagnosis. Since manual segmentation is time-consuming and operator-dependent, an accurate and fast segmentation method is highly demanded. However, it is challenging for current deep-learning based methods to segment ovary and follicles precisely due to ambiguous boundaries and insufficient annotations. In this paper, we propose a contrastive rendering (C-Rend) framework to segment ovary and follicles with detail-refined boundaries. Furthermore, we incorporate the proposed C-Rend with a semi-supervised learning (SSL) framework, leveraging unlabeled data for better performance. Highlights of this paper include: (1) A rendering task is performed to estimate boundary accurately via enriched feature representation learning. (2) Point-wise contrastive learning is proposed to enhance the similarity of intra-class points and contrastively decrease the similarity of inter-class points. (3) The C-Rend plays a complementary role for the SSL framework in uncertainty-aware learning, which could provide reliable supervision information and achieve superior segmentation performance. Through extensive validation on large in-house datasets with partial annotations, our method outperforms state-of-the-art methods in various evaluation metrics for both the ovary and follicles.

Brilliant cresyl blue enhanced optoacoustic imaging enables non-destructive imaging of mammalian ovarian follicles for artificial reproduction

In the field of reproductive biology, there is a strong need for a suitable tool capable of non-destructive evaluation of oocyte viability and function. We studied the application of brilliant cresyl blue (BCB) as an intra-vital exogenous contrast agent using multispectral optoacoustic tomography (MSOT) for visualization of porcine ovarian follicles. The technique provided excellent molecular sensitivity, enabling the selection of competent oocytes without disrupting the follicles. We further conducted in vitro embryo culture, molecular analysis (real-time and reverse transcriptase polymerase chain reaction) and DNA fragmentation analysis to comprehensively establish the safety of BCB-enhanced MSOT imaging in monitoring oocyte viability. Overall, the experimental results suggest that the method offers a significant advance in the use of contrast agents and molecular imaging for reproductive studies. Our technique improves the accurate prediction of ovarian reserve significantly and, once standardized for in vivo imaging, could provide an effective tool for clinical infertility management.

CR-Unet: A Composite Network for Ovary and Follicle Segmentation in Ultrasound Images

Transvaginal ultrasound (TVUS) is widely used in infertility treatment. The size and shape of the ovary and follicles must be measured manually for assessing their physiological status by sonographers. However, this process is extremely time-consuming and operator-dependent. In this study, we propose a novel composite network, namely CR-Unet, to simultaneously segment the ovary and follicles in TVUS. The CR-Unet incorporates the spatial recurrent neural network (RNN) into a plain U-Net. It can effectively learn multi-scale and long-range spatial contexts to combat the challenges of this task, such as the poor image quality, low contrast, boundary ambiguity, and complex anatomy shapes. We further adopt deep supervision strategy to make model training more effective and efficient. In addition, self-supervision is employed to iteratively refine the segmentation results. Experiments on 3204 TVUS images from 219 patients demonstrate the proposed method achieved the best segmentation performance compared to other state-of-the-art methods for both the ovary and follicles, with a Dice Similarity Coefficient (DSC) of 0.912 and 0.858, respectively.

Automated localization and segmentation techniques for B-mode ultrasound images: A review

B-mode ultrasound imaging is used extensively in medicine. Hence, there is a need to have efficient segmentation tools to aid in computer-aided diagnosis, image-guided interventions, and therapy. This paper presents a comprehensive review on automated localization and segmentation techniques for B-mode ultrasound images. The paper first describes the general characteristics of B-mode ultrasound images. Then insight on the localization and segmentation of tissues is provided, both in the case in which the organ/tissue localization provides the final segmentation and in the case in which a two-step segmentation process is needed, due to the desired boundaries being too fine to locate from within the entire ultrasound frame. Subsequenly, examples of some main techniques found in literature are shown, including but not limited to shape priors, superpixel and classification, local pixel statistics, active contours, edge-tracking, dynamic programming, and data mining. Ten selected applications (abdomen/kidney, breast, cardiology, thyroid, liver, vascular, musculoskeletal, obstetrics, gynecology, prostate) are then investigated in depth, and the performances of a few specific applications are compared. In conclusion, future perspectives for B-mode based segmentation, such as the integration of RF information, the employment of higher frequency probes when possible, the focus on completely automatic algorithms, and the increase in available data are discussed.

Advancing ovarian folliculometry with selective plane illumination microscopy

Determination of ovarian status and follicle monitoring are common methods of diagnosing female infertility. We evaluated the suitability of selective plane illumination microscopy (SPIM) for the study of ovarian follicles. The large field of view and fast acquisition speed of our SPIM system enables rendering of volumetric image stacks from intact whole porcine ovarian follicles, clearly visualizing follicular features including follicle volume and average diameter (70 μm-2.5 mm), their spherical asymmetry parameters, size of developing cumulus oophorus complexes (40 μm-110 μm), and follicular wall thickness (90 μm-120 μm). Follicles at all developmental stages were identified. A distribution of the theca thickness was measured for each follicle, and a relationship between these distributions and the stages of follicular development was discerned. The ability of the system to non-destructively generate sub-cellular resolution 3D images of developing follicles, with excellent image contrast and high throughput capacity compared to conventional histology, suggests that it can be used to monitor follicular development and identify structural abnormalities indicative of ovarian ailments. Accurate folliculometric measurements provided by SPIM images can immensely help the understanding of ovarian physiology and provide important information for the proper management of ovarian diseases.

Tumor sensitive matching flow: A variational method to detecting and segmenting perihepatic and perisplenic ovarian cancer metastases on contrast-enhanced abdominal CT

Accurate automated segmentation and detection of ovarian cancer metastases may improve the diagnosis and prognosis of women with ovarian cancer. In this paper, we focus on an important subset of ovarian cancer metastases that spread to the surface of the liver and spleen. Automated ovarian cancer metastasis detection and segmentation are very challenging problems to solve. These metastases have a wide variety of shapes and intensity values similar to that of the liver, spleen and adjacent soft tissues. To address these challenges, this paper presents a variational approach, called tumor sensitive matching flow (TSMF), to detect and segment perihepatic and perisplenic ovarian cancer metastases. TSMF is an image motion field that only highlights metastasis-caused deformation on the surface of liver and spleen while dampening all other image motion between the patient image and the atlas image. It provides several benefits: (1) juxtaposing the roles of image matching and metastasis classification within a variational framework; (2) only requiring a small set of features from a few patient images to train a metastasis-likelihood function for classification; and (3) dynamically creating shape priors for geodesic active contour (GAC) to prevent inaccurate metastasis segmentation. We compared the TSMF to an organ surface partition (OSP) baseline approach. At a false positive rate of 2 per patient, the sensitivities of TSMF and OSP were 87% and 17% (p<0.001), respectively. In a comparison of the segmentations conducted using TSMF-constrained GAC and conventional GAC, the volume overlap rates were 73 ± 9% and 46 ± 26% (p<0.001) and average surface distances were 2.4 ± 1.2 mm and 7.0 ± 6.0 mm (p<0.001), respectively. These encouraging results demonstrate that TSMF could accurately detect and segment ovarian cancer metastases.

Computerized detection and recognition of follicles in ovarian ultrasound images: a review

Observing changes in females' ovaries is essential in obstetrics and gynaecological imaging, e.g., genetic engineering and human reproduction. It is particularly important to monitor the dynamics of ovarian follicles' growth, as only fully mature and grown follicles, i.e., the dominant follicles have a potential to ovulate at the end of a follicular phase. Gynaecologists follow this process in two dimensions, but recently three-dimensional (3-D) ultrasound examinations are coming to the fore. This paper surveys the existing computer methods for detection, recognition, and analyses of follicles in two-dimensional (2-D) and 3-D ovarian ultrasound recordings. Our study focuses on the efficiency, validation, and assessment of proposed follicle processing algorithms. The most important processing steps were identified in order to compare their performances. Higher ranking solutions are suggested for the so-called best algorithm for 2-D and 3-D ultrasound recordings of ovarian follicles. Finally, some guidelines for future research in this field are discussed, in particular for 3-D ultrasound volumes.

SEGMENTATION OF OVARIAN ULTRASOUND IMAGES USING CELLULAR NEURAL NETWORKS

Segmentation of ovarian ultrasound images using cellular neural networks (CNNs) is studied in this paper. The segmentation method consists of five successive steps where the first four uses CNNs. In the first step, only rough position of follicles is determined. In the second step, the results are improved by expansion of detected follicles. In the third step, previously undetected inexpressive follicles are determined, while the fourth step detects the position of ovary. All results are joined in the fifth step. The templates for CNNs were obtained by applying genetic algorithm. The segmentation method has been tested on 50 ovarian ultrasound images. The recognition rate of follicles was around 60% and misidentification rate was around 30%.

Acoustic Radiation Force Impulse (ARFI) imaging-based needle visualization

Ultrasound-guided needle placement is widely used in the clinical setting, particularly for central venous catheter placement, tissue biopsy and regional anesthesia. Difficulties with ultrasound guidance in these areas often result from steep needle insertion angles and spatial offsets between the imaging plane and the needle. Acoustic Radiation Force Impulse (ARFI) imaging leads to improved needle visualization because it uses a standard diagnostic scanner to perform radiation force based elasticity imaging, creating a displacement map that displays tissue stiffness variations. The needle visualization in ARFI images is independent of needle-insertion angle and also extends needle visibility out of plane. Although ARFI images portray needles well, they often do not contain the usual B-mode landmarks. Therefore, a three-step segmentation algorithm has been developed to identify a needle in an ARFI image and overlay the needle prediction on a coregistered B-mode image. The steps are: (1) contrast enhancement by median filtration and Laplacian operator filtration, (2) noise suppression through displacement estimate correlation coefficient thresholding and (3) smoothing by removal of outliers and best-fit line prediction. The algorithm was applied to data sets from horizontal 18, 21 and 25 gauge needles between 0-4 mm offset in elevation from the transducer imaging plane and to 18G needles on the transducer axis (in plane) between 10 degrees and 35 degrees from the horizontal. Needle tips were visualized within 2 mm of their actual position for both horizontal needle orientations up to 1.5 mm offset in elevation from the transducer imaging plane and on-axis angled needles between 10 degrees-35 degrees above the horizontal orientation. We conclude that segmented ARFI images overlaid on matched B-mode images hold promise for improved needle visibility in many clinical applications.

Fetal abdominal contour extraction and measurement in ultrasound images

A novel method is developed for the fetal abdominal contour extraction and measurement in ultrasound images. Fetal abdominal circumference (AC) is one of the standardized measurements in the antepartum ultrasound monitoring. Among several standardized measurements, AC is best correlated with fetal growth but is also the most difficult to be accurately measured. To overcome the difficulties in the abdominal contour extraction, the proposed method is a four-step procedure that integrates several image segmentation techniques. The proposed method is able to make the best use of the strength of different segmentation algorithms, while avoiding their deficiencies. An enhanced instantaneous coefficient of variation (ICOV) edge detector is first developed to detect edges of the abdominal contour and alleviate the effects of most speckle noise. Then, the Fuzzy C-Means clustering is employed to distinguish salient edges attributable to the abdominal contour from weak edges due to the other texture. Subsequently, the iterative Hough transform is applied to determine an elliptical contour and obtain an initial estimation of the AC. Finally, the gradient vector field (GVF) snake adapts the initial ellipse to the real edges of the abdominal contour. Quantitative validation of the proposed method on synthetic images under different imaging conditions achieves satisfactory segmentation accuracy (98.78%+/-0.16%). Experiments on 150 clinical images are carried out in three aspects: comparisons between inter-observer and inter-run variation, the fitness analysis between the automatically detected ellipse and the manual delineation, and the accuracy comparisons between automatic measurements and manual measurements in estimation of fetal weight (EFW). Experimental results show that the proposed method can provide consistent and accurate measurements. The reductions of the mean absolute difference and the standard deviation of EFW based on automatic measurements are about 1.2% and 2.1%, respectively, which indicate its potential in clinical antepartum monitoring application.

Volume segmentation and reconstruction from freehand three-dimensional ultrasound data with application to ovarian follicle measurement

This article presents a semi-automatic method for segmentation and reconstruction of freehand three-dimensional (3D) ultrasound data. The method incorporates a number of interesting features within the level-set framework: First, segmentation is carried out using region competition, requiring multiple distinct and competing regions to be encoded within the framework. This region competition uses a simple dot-product based similarity measure to compare intensities within each region. In addition, segmentation and surface reconstruction is performed within the 3D domain to take advantage of the additional spatial information available. This means that the method must interpolate the surface where there are gaps in the data, a feature common to freehand 3D ultrasound reconstruction. Finally, although the level-set method is restricted to a voxel grid, no assumption is made that the data being segmented will conform to this grid and may be segmented in its world-reference position. The volume reconstruction method is demonstrated in vivo for the volume measurement of ovarian follicles. The 3D reconstructions produce a lower error variance than the current clinical measurement based on a mean diameter estimated from two-dimensional (2D) images. However, both the clinical measurement and the semi-automatic method appear to underestimate the true follicular volume.

Ultrasound image segmentation: a survey

This paper reviews ultrasound segmentation paper methods, in a broad sense, focusing on techniques developed for medical B-mode ultrasound images. First, we present a review of articles by clinical application to highlight the approaches that have been investigated and degree of validation that has been done in different clinical domains. Then, we present a classification of methodology in terms of use of prior information. We conclude by selecting ten papers which have presented original ideas that have demonstrated particular clinical usefulness or potential specific to the ultrasound segmentation problem.

Watershed-presegmented snake for boundary detection and tracking of left ventricle in echocardiographic images

In this paper, an automated method of boundary detection of the left ventricle (LV) is proposed. The method uses a watershed transform and morphological operation to locate the region containing the LV, then performs snake deformation with a multiscale directional edge map for the detection of the endocardial boundary of the LV.

Segmentation of elastographic images using a coarse-to-fine active contour model

Delineation of radiofrequency-ablation-induced coagulation (thermal lesion) boundaries is an important clinical problem that is not well addressed by conventional imaging modalities. Elastography, which produces images of the local strain after small, externally applied compressions, can be used for visualization of thermal coagulations. This paper presents an automated segmentation approach for thermal coagulations on 3-D elastographic data to obtain both area and volume information rapidly. The approach consists of a coarse-to-fine method for active contour initialization and a gradient vector flow, active contour model for deformable contour optimization with the help of prior knowledge of the geometry of general thermal coagulations. The performance of the algorithm has been shown to be comparable to manual delineation of coagulations on elastograms by medical physicists (r = 0.99 for volumes of 36 radiofrequency-induced coagulations). Furthermore, the automatic algorithm applied to elastograms yielded results that agreed with manual delineation of coagulations on pathology images (r = 0.96 for the same 36 lesions). This algorithm has also been successfully applied on in vivo elastograms.

Cell-competition algorithm: a new segmentation algorithm for multiple objects with irregular boundaries in ultrasound images

Segmentation of multiple objects with irregular contours and surrounding sporadic spots is a common practice in ultrasound image analysis. A new region-based approach, called cell-competition algorithm, is proposed for simultaneous segmentation of multiple objects in a sonogram. The algorithm is composed of two essential ideas. One is simultaneous cell-based deformation of regions and the other is cell competition. The cells are generated by two-pass watershed transformations. The cell-competition algorithm has been validated with 13 synthetic images of different contrast-to-noise ratios and 71 breast sonograms. Three assessments have been carried out and the results show that the boundaries derived by the cell-competition algorithm are reasonably comparable to those delineated manually. Moreover, the cell-competition algorithm is robust to the variation of regions-of-interest and a range of thresholds required for the second-pass watershed transformation. The proposed algorithm is also shown to be superior to the region-competition algorithm for both types of images.

Three-dimensional ultrasound in margin evaluation for breast tumor excision using Mammotome

Sonographic evidence of tumor removal by Mammotome excision does not confirm histological clearance. The operator finds it hard to determine if a malignant tumor has been fully removed, leaving a safe margin in the direction of each border; that is, the spatial orientation during tumor retrieval is not well-established by naked eye under sonographic guidance. We propose a computational imaging process to extract reasonable tumor contour in pre- and postoperative data sets for sonographic guidance so that Mammotome excision can help the operator to evaluate the surgical outcome. There were five tumors in the study, including three benign and two malignant. The lesion of interest was delineated after 2-D examination was completed, then it was analyzed with 3-D breast ultrasound (US). To give a reference point for correlations between pre- and postoperative images, we used a marker tape pasted on the skin within the transducer scanning area and then the preoperative 3-D US images were obtained. Subsequently, 2-D breast US was applied during Mammotome operation. After the Mammotome procedures were finished, the postoperative 3-D US images were obtained; thus, we gained two different data sets of 3-D US images that were used for later analysis for evaluating the extension of postoperative margin status. From the results, the safe margin was not satisfactory in all directions, because the minimum differences measured by the proposed algorithm were not large enough in all five cases, and this was proved from two malignant mastectomy specimens. The experimental results representing this inadequate Mammotome excision can be visualized through the computer aid. The comparison of tumor contour and excision margin may possibly be used for small malignant tumors in the future to improve the breast-conserving surgery.

An automatic approach for morphological analysis and malignancy evaluation of ovarian masses using B-scans

Ovarian masses are a common phenomenon among women of all ages. The importance of prompt diagnosis of ovarian malignancies is obvious, due to the high mortality rate and the difficulty to detect a tumor in its early stages. In this work, an automatic technique for quantitative analysis and malignancy detection of ovarian masses using B-scan ultrasound (US) images is presented. The core of the technique is morphologic analysis of the ovarian mass. The method employed for this task is divided into two major stages: initial classification of the mass (into one of the three major tumor types: cyst, semisolid, solid), and detailed analysis of the mass. Malignancy evaluation is performed based on the collected data and the criteria provided by commonly used scoring systems. The results reflect adequate performance of the automatic method developed (referring to clinical requirements).

Improved prediction-based ovarian follicle detection from a sequence of ultrasound images

A new algorithm is presented for ovarian follicle recognition from a sequence of ultrasound images. The basic version of the prediction-based algorithm is upgraded by means of two improvements. The negative influence brought by the gross measurement errors is suppressed, and the locality of the treated process is considered. The basis for both improvements is the Kalman filter. The proposed algorithm is a combination of three mutually dependent Kalman filters: a global one whose parameters are then modified by two additional ones, firstly detecting the gross measurement errors and secondly, regarding the recognised contour of the object. The obtained results show that the follicles recognised using the final prediction algorithm are about 2% more compact and about 6% more accurate, on average, when compared to the values obtained using the basic prediction-based algorithm.

Validation of ultrasonic image boundary recognition in abdominal aortic aneurysm

An aneurysm of the abdominal aorta (AAA) is characterized by modified wall properties, and a balloon-like area usually filled by a thrombus. A rupture of an aortic aneurysm can be fatal, yet there is no way to accurately predict such an occurrence. The study of the wall and thrombus cross-sectional distension, due to a pressure wave, is important as a way of assessing the degradation of the mechanical properties of the vessel wall and the risk of a rupture. Echo ultrasound transverse cross-sectional imaging is used here to study the thrombus and the aortic wall distension, requiring their segmentation within the image. Polar coordinates are defined, and a search is performed for minimizing a cost function, which includes a description of the boundary (based on a limited series of sine and cosine functions) and information from the image intensity gradients along the radii. The method is based on filtering by a modified Canny-Deriche edge detector and then on minimization of an energy function based on five parts. Since echoes from blood in the lumen and the thrombus produce similar patterns and speckle noise, a modified version for identifying the lumen-thrombus border was developed. The method has been validated by various ways, including parameter sensitivity testing and comparison to the performance of an expert. It is robust enough to track the lumen and total arterial cross-sectional area changes during the cardiac cycle. In 34 patients where sequences of images were acquired, the border between the thrombus and the arterial wall was detected with errors less than 2%, while the lumen-thrombus border was detected with a mean error of 4%. Thus, a noninvasive measurement of the AAA cross-sectional area is presented, which has been validated and found to be accurate.

Interaction in the segmentation of medical images: a survey

Segmentation of the object of interest is a difficult step in the analysis of digital images. Fully automatic methods sometimes fail, producing incorrect results and requiring the intervention of a human operator. This is often true in medical applications, where image segmentation is particularly difficult due to restrictions imposed by image acquisition, pathology and biological variation. In this paper we present an early review of the largely unknown territory of human-computer interaction in image segmentation. The purpose is to identify patterns in the use of interaction and to develop qualitative criteria to evaluate interactive segmentation methods. We discuss existing interactive methods with respect to the following aspects: the type of information provided by the user, how this information affects the computational part, and the purpose of interaction in the segmentation process. The discussion is based on the potential impact of each strategy on the accuracy, repeatability and interaction efficiency. Among others, these are important aspects to characterise and understand the implications of interaction to the results generated by an interactive segmentation method. This survey is focused on medical imaging, however similar patterns are expected to hold for other applications as well.

Edge-guided boundary delineation in prostate ultrasound images

Accurate detection of prostate boundaries is required in many diagnostic and treatment procedures for prostate disease. In this paper, a new paradigm for guided edge delineation is described, which involves presenting automatically detected prostate edges as a visual guide to the observer, followed by manual editing. This approach enables robust delineation of the prostate boundaries, making it suitable for routine clinical use. The edge-detection algorithm is comprised of three stages. An algorithm called sticks is used to enhance contrast and at the same time reduce speckle in the transrectal ultrasound prostate image. The resulting image is further smoothed using an anisotropic diffusion filter. In the third stage, some basic prior knowledge of the prostate, such as shape and echo pattern, is used to detect the most probable edges describing the prostate. Finally, patient-specific anatomic information is integrated during manual linking of the detected edges. The algorithm was tested on 125 images from 16 patients. The performance of the algorithm was statistically evaluated by employing five expert observers. Based on this study, we found that consistency in prostate delineation increases when automatically detected edges are used as visual guide during outlining, while the accuracy of the detected edges was found to be at least as good as those of the human observers. The use of edge guidance for boundary delineation can also be extended to other applications in medical imaging where poor contrast in the images and the complexity in the anatomy limit the clinical usability of fully automatic edge-detection techniques.