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Shehata M, Ghazal M, Khalifeh HA, Khalil A, Shalaby A, Dwyer AC, Bakr AM, Keynton R, El-Baz A. A DEEP LEARNING-BASED CAD SYSTEM FOR RENAL ALLOGRAFT ASSESSMENT: DIFFUSION, BOLD, AND CLINICAL BIOMARKERS. PROCEEDINGS. INTERNATIONAL CONFERENCE ON IMAGE PROCESSING 2020; 2020:355-359. [PMID: 34720753 PMCID: PMC8553095 DOI: 10.1109/icip40778.2020.9190818] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Recently, studies for non-invasive renal transplant evaluation have been explored to control allograft rejection. In this paper, a computer-aided diagnostic system has been developed to accommodate with an early-stage renal transplant status assessment, called RT-CAD. Our model of this system integrated multiple sources for a more accurate diagnosis: two image-based sources and two clinical-based sources. The image-based sources included apparent diffusion coefficients (ADCs) and the amount of deoxygenated hemoglobin (R2*). More specifically, these ADCs were extracted from 47 diffusion weighted magnetic resonance imaging (DW-MRI) scans at 11 different b-values (b0, b50, b100, …, b1000 s/mm2), while the R2* values were extracted from 30 blood oxygen level-dependent MRI (BOLD-MRI) scans at 5 different echo times (2ms, 7ms, 12ms, 17ms, and 22ms). The clinical sources included serum creatinine (SCr) and creatinine clearance (CrCl). First, the kidney was segmented through the RT-CAD system using a geometric deformable model called a level-set method. Second, both ADCs and R2* were estimated for common patients (N = 30) and then were integrated with the corresponding SCr and CrCl. Last, these integrated biomarkers were considered the discriminatory features to be used as trainers and testers for future deep learning-based classifiers such as stacked auto-encoders (SAEs). We used a k-fold cross-validation criteria to evaluate the RT-CAD system diagnostic performance, which achieved the following scores: 93.3%, 90.0%, and 95.0% in terms of accuracy, sensitivity, and specificity in differentiating between acute renal rejection (AR) and non-rejection (NR). The reliability and completeness of the RT-CAD system was further accepted by the area under the curve score of 0.92. The conclusions ensured that the presented RT-CAD system has a high reliability to diagnose the status of the renal transplant in a non-invasive way.
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Affiliation(s)
- Mohamed Shehata
- BioImaging Lab, Bioengineering Department, University of Louisville, Louisville, KY, USA
| | - Mohammed Ghazal
- Faculty of Engineering, Abu Dhabi University, Abu Dhabi, UAE
| | | | - Ashraf Khalil
- Faculty of Engineering, Abu Dhabi University, Abu Dhabi, UAE
| | - Ahmed Shalaby
- BioImaging Lab, Bioengineering Department, University of Louisville, Louisville, KY, USA
| | - Amy C Dwyer
- Pediatric Nephrology Unit, Mansoura University Children's Hospital, University of Mansoura, Egypt
| | - Ashraf M Bakr
- Kidney Disease Program, University of Louisville, Louisville, KY, USA
| | - Robert Keynton
- BioImaging Lab, Bioengineering Department, University of Louisville, Louisville, KY, USA
| | - Ayman El-Baz
- BioImaging Lab, Bioengineering Department, University of Louisville, Louisville, KY, USA
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