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Pascual-Sánchez L, Goya-Esteban R, Cruz-Roldán F, Hernández-Madrid A, Blanco-Velasco M. Machine learning based detection of T-wave alternans in real ambulatory conditions. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2024; 249:108157. [PMID: 38582037 DOI: 10.1016/j.cmpb.2024.108157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2024] [Revised: 03/20/2024] [Accepted: 03/28/2024] [Indexed: 04/08/2024]
Abstract
BACKGROUND AND OBJECTIVE T-wave alternans (TWA) is a fluctuation in the repolarization morphology of the ECG. It is associated with cardiac instability and sudden cardiac death risk. Diverse methods have been proposed for TWA analysis. However, TWA detection in ambulatory settings remains a challenge due to the absence of standardized evaluation metrics and detection thresholds. METHODS In this work we use traditional TWA analysis signal processing-based methods for feature extraction, and two machine learning (ML) methods, namely, K-nearest-neighbor (KNN) and random forest (RF), for TWA detection, addressing hyper-parameter tuning and feature selection. The final goal is the detection in ambulatory recordings of short, non-sustained and sparse TWA events. RESULTS We train ML methods to detect a wide variety of alternant voltage from 20 to 100 μV, i.e., ranging from non-visible micro-alternans to TWA of higher amplitudes, to recognize a wide range in concordance to risk stratification. In classification, RF outperforms significantly the recall in comparison with the signal processing methods, at the expense of a small lost in precision. Despite ambulatory detection stands for an imbalanced category context, the trained ML systems always outperform signal processing methods. CONCLUSIONS We propose a comprehensive integration of multiple variables inspired by TWA signal processing methods to fed learning-based methods. ML models consistently outperform the best signal processing methods, yielding superior recall scores.
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Affiliation(s)
- Lidia Pascual-Sánchez
- Department of Teoría de la Señal y Comunicaciones, Universidad de Alcalá, Madrid, Spain.
| | - Rebeca Goya-Esteban
- Department of Teoría de la Señal y Comunicaciones, Universidad Rey Juan Carlos, Madrid, Spain.
| | - Fernando Cruz-Roldán
- Department of Teoría de la Señal y Comunicaciones, Universidad de Alcalá, Madrid, Spain.
| | | | - Manuel Blanco-Velasco
- Department of Teoría de la Señal y Comunicaciones, Universidad de Alcalá, Madrid, Spain.
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Fernández–Calvillo MG, Goya–Esteban R, Cruz–Roldán F, Hernández–Madrid A, Blanco–Velasco M. Machine Learning approach for TWA detection relying on ensemble data design. Heliyon 2023; 9:e12947. [PMID: 36699267 PMCID: PMC9868537 DOI: 10.1016/j.heliyon.2023.e12947] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Revised: 12/23/2022] [Accepted: 01/10/2023] [Indexed: 01/17/2023] Open
Abstract
BACKGROUND AND OBJECTIVE T-wave alternans (TWA) is a fluctuation of the ST-T complex of the surface electrocardiogram (ECG) on an every-other-beat basis. It has been shown to be clinically helpful for sudden cardiac death stratification, though the lack of a gold standard to benchmark detection methods limits its application and impairs the development of alternative techniques. In this work, a novel approach based on machine learning for TWA detection is proposed. Additionally, a complete experimental setup is presented for TWA detection methods benchmarking. METHODS The proposed experimental setup is based on the use of open-source databases to enable experiment replication and the use of real ECG signals with added TWA episodes. Also, intra-patient overfitting and class imbalance have been carefully avoided. The Spectral Method (SM), the Modified Moving Average Method (MMA), and the Time Domain Method (TM) are used to obtain input features to the Machine Learning (ML) algorithms, namely, K Nearest Neighbor, Decision Trees, Random Forest, Support Vector Machine and Multi-Layer Perceptron. RESULTS There were not found large differences in the performance of the different ML algorithms. Decision Trees showed the best overall performance (accuracy 0.88 ± 0.04 , precision 0.89 ± 0.05 , Recall 0.90 ± 0.05 , F1 score 0.89 ± 0.03 ). Compared to the SM (accuracy 0.79, precision 0.93, Recall 0.64, F1 score 0.76) there was an improvement in every metric except for the precision. CONCLUSIONS In this work, a realistic database to test the presence of TWA using ML algorithms was assembled. The ML algorithms overall outperformed the SM used as a gold standard. Learning from data to identify alternans elicits a substantial detection growth at the expense of a small increment of the false alarm.
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Affiliation(s)
| | - Rebeca Goya–Esteban
- Department of Teoría de la Señal y Comunicaciones, Universidad Rey Juan Carlos, Madrid, Spain
| | - Fernando Cruz–Roldán
- Department of Teoría de la Señal y Comunicaciones, Universidad de Alcalá, Madrid, Spain
| | | | - Manuel Blanco–Velasco
- Department of Teoría de la Señal y Comunicaciones, Universidad de Alcalá, Madrid, Spain
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Deng M, Wu W, Cao J, Tang M, Wang C. Deterministic Learning-Based Methodology for Detecting Abnormal Dynamics of Cardiac Repolarization During Ischemia. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2019:1492-1495. [PMID: 31946176 DOI: 10.1109/embc.2019.8857900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
OBJECTIVE This study concentrates on subtle electrocardiogram (ECG) spatiotemporal characteristics in the repolarization phase, and describes a deterministic learning-based methodology for the detection of abnormal cardiac dynamics induced by ischemia. METHODS ST-T complex of the surface 12-lead ECG signals are identified and extracted. Cardiac dynamics underlying ST-T complex signals is captured using deterministic learning algorithm. This kind of dynamics information represents the beat-to-beat temporal change of electrophysiological modifications in ventricular repolarization, which is shown to be sensitive to the variance during myocardial ischemia. Cardiodynamicsgram (CDG) is proposed as the three-dimensional graphic representation of cardiac dynamics information. RESULTS Encouraging evaluation results are achieved on electrocardiograms from public PTB database and hospital patients. Significant correlations are found between the CDG morphology and ischemia. CONCLUSION Anormal dynamics of cardiac repolarization during ischemia can be detected using a deterministic learning-based methodology. The extracted cardiac dynamics information within routine ECG is expected to provide early detection for latent ischemia before obvious pathological changes are present in ECG. SIGNIFICANCE The proposed techniques can be considered as a complementary tool to the generally accepted ECG method for detection of abnormal dynamics in cardiac repolarization, which are important for identifying patients at risk of myocardial ischemia.
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Padhy S, Dandapat S. Validation of μ-volt T-wave alternans analysis using multiscale analysis-by-synthesis and higher-order SVD. Biomed Signal Process Control 2018. [DOI: 10.1016/j.bspc.2017.09.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Blanco-Velasco M, Goya-Esteban R, Cruz-Roldán F, García-Alberola A, Rojo-Álvarez JL. Benchmarking of a T-wave alternans detection method based on empirical mode decomposition. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2017; 145:147-155. [PMID: 28552120 DOI: 10.1016/j.cmpb.2017.04.005] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Revised: 03/22/2017] [Accepted: 04/11/2017] [Indexed: 06/07/2023]
Abstract
BACKGROUND AND OBJECTIVE T-wave alternans (TWA) is a fluctuation of the ST-T complex occurring on an every-other-beat basis of the surface electrocardiogram (ECG). It has been shown to be an informative risk stratifier for sudden cardiac death, though the lack of gold standard to benchmark detection methods has promoted the use of synthetic signals. This work proposes a novel signal model to study the performance of a TWA detection. Additionally, the methodological validation of a denoising technique based on empirical mode decomposition (EMD), which is used here along with the spectral method, is also tackled. METHODS The proposed test bed system is based on the following guidelines: (1) use of open source databases to enable experimental replication; (2) use of real ECG signals and physiological noise; (3) inclusion of randomized TWA episodes. Both sensitivity (Se) and specificity (Sp) are separately analyzed. Also a nonparametric hypothesis test, based on Bootstrap resampling, is used to determine whether the presence of the EMD block actually improves the performance. RESULTS The results show an outstanding specificity when the EMD block is used, even in very noisy conditions (0.96 compared to 0.72 for SNR = 8 dB), being always superior than that of the conventional SM alone. Regarding the sensitivity, using the EMD method also outperforms in noisy conditions (0.57 compared to 0.46 for SNR=8 dB), while it decreases in noiseless conditions. CONCLUSIONS The proposed test setting designed to analyze the performance guarantees that the actual physiological variability of the cardiac system is reproduced. The use of the EMD-based block in noisy environment enables the identification of most patients with fatal arrhythmias.
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Affiliation(s)
- Manuel Blanco-Velasco
- Department of Teoría de la Señal y Comunicaciones, Universidad de Alcalá, Alcalá de Henares 28805, Madrid, Spain.
| | - Rebeca Goya-Esteban
- Department of Teoría de la Señal y Comunicaciones, Universidad Rey Juan Carlos, Fuenlabrada 28943, Madrid, Spain.
| | - Fernando Cruz-Roldán
- Department of Teoría de la Señal y Comunicaciones, Universidad de Alcalá, Alcalá de Henares 28805, Madrid, Spain.
| | - Arcadi García-Alberola
- Arrhythmia Unit, Hospital Universitario Virgen de la Arrixaca, El Palmar, Murcia, Spain.
| | - José Luis Rojo-Álvarez
- Department of Teoría de la Señal y Comunicaciones, Universidad Rey Juan Carlos, Fuenlabrada 28943, Madrid, Spain.
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Gimeno-Blanes FJ, Blanco-Velasco M, Barquero-Pérez Ó, García-Alberola A, Rojo-Álvarez JL. Sudden Cardiac Risk Stratification with Electrocardiographic Indices - A Review on Computational Processing, Technology Transfer, and Scientific Evidence. Front Physiol 2016; 7:82. [PMID: 27014083 PMCID: PMC4780431 DOI: 10.3389/fphys.2016.00082] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2015] [Accepted: 02/19/2016] [Indexed: 11/22/2022] Open
Abstract
Great effort has been devoted in recent years to the development of sudden cardiac risk predictors as a function of electric cardiac signals, mainly obtained from the electrocardiogram (ECG) analysis. But these prediction techniques are still seldom used in clinical practice, partly due to its limited diagnostic accuracy and to the lack of consensus about the appropriate computational signal processing implementation. This paper addresses a three-fold approach, based on ECG indices, to structure this review on sudden cardiac risk stratification. First, throughout the computational techniques that had been widely proposed for obtaining these indices in technical literature. Second, over the scientific evidence, that although is supported by observational clinical studies, they are not always representative enough. And third, via the limited technology transfer of academy-accepted algorithms, requiring further meditation for future systems. We focus on three families of ECG derived indices which are tackled from the aforementioned viewpoints, namely, heart rate turbulence (HRT), heart rate variability (HRV), and T-wave alternans. In terms of computational algorithms, we still need clearer scientific evidence, standardizing, and benchmarking, siting on advanced algorithms applied over large and representative datasets. New scenarios like electronic health recordings, big data, long-term monitoring, and cloud databases, will eventually open new frameworks to foresee suitable new paradigms in the near future.
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Affiliation(s)
| | - Manuel Blanco-Velasco
- Department of Signal Theory and Communications, University of de Alcalá Alcalá de Henares, Spain
| | - Óscar Barquero-Pérez
- Department of Signal Theory and Communications, Rey Juan Carlos University Fuenlabrada, Spain
| | | | - José L Rojo-Álvarez
- Department of Signal Theory and Communications, Rey Juan Carlos University Fuenlabrada, Spain
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Cheng LF, Chen TC, Chen LG. Architecture design of the multi-functional wavelet-based ECG microprocessor for realtime detection of abnormal cardiac events. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2013; 2012:4466-9. [PMID: 23366919 DOI: 10.1109/embc.2012.6346958] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Most of the abnormal cardiac events such as myocardial ischemia, acute myocardial infarction (AMI) and fatal arrhythmia can be diagnosed through continuous electrocardiogram (ECG) analysis. According to recent clinical research, early detection and alarming of such cardiac events can reduce the time delay to the hospital, and the clinical outcomes of these individuals can be greatly improved. Therefore, it would be helpful if there is a long-term ECG monitoring system with the ability to identify abnormal cardiac events and provide realtime warning for the users. The combination of the wireless body area sensor network (BASN) and the on-sensor ECG processor is a possible solution for this application. In this paper, we aim to design and implement a digital signal processor that is suitable for continuous ECG monitoring and alarming based on the continuous wavelet transform (CWT) through the proposed architectures--using both programmable RISC processor and application specific integrated circuits (ASIC) for performance optimization. According to the implementation results, the power consumption of the proposed processor integrated with an ASIC for CWT computation is only 79.4 mW. Compared with the single-RISC processor, about 91.6% of the power reduction is achieved.
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Affiliation(s)
- Li-Fang Cheng
- DSP/IC Design Lab, Graduate Institute of Electronics Engineering, National Taiwan University, Taiwan.
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Wan X, Yan K, Luo D, Zeng Y. A combined algorithm for T-wave alternans qualitative detection and quantitative measurement. J Cardiothorac Surg 2013; 8:7. [PMID: 23311454 PMCID: PMC3554460 DOI: 10.1186/1749-8090-8-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2012] [Accepted: 01/07/2013] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND T-wave alternans (TWA) provides a noninvasive and clinically useful marker for the risk of sudden cardiac death (SCD). Current most widely used TWA detection algorithms work in two different domains: time and frequency. The disadvantage of the spectral analytical techniques is that they treat the alternans signal as a stationary wave with a constant amplitude and a phase. They cannot detect non-stationary characteristics of the signal. The temporal domain methods are sensitive to the alignment of the T-waves. In this study, we sought to develop a robust combined algorithm (CA) to assess T-wave alternans, which can qualitatively detect and quantitatively measure TWA in time domain. METHODS The T wave sequences were extracted and the total energy of each T wave within the specified time-frequency region was calculated. The rank-sum test was applied to the ranked energy sequences of T waves to detect TWA qualitatively. The ECG containing TWA was quantitatively analyzed with correlation method. RESULTS Simulation test result proved a mean sensitivity of 91.2% in detecting TWA, and for the SNR not less than 30 dB, the accuracy rate of detection achieved 100%. The clinical data experiment showed that the results from this method vs. spectral method had the correlation coefficients of 0.96. CONCLUSIONS A novel TWA analysis algorithm utilizing the wavelet transform and correlation technique is presented in this paper. TWAs are not only correctly detected qualitatively in frequency domain by energy value of T waves, but the alternans frequency and amplitude in temporal domain are measured quantitatively.
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Affiliation(s)
- XiangKui Wan
- School of Information Engineering, Guangdong University of Technology, Guangzhou, 510006, China
| | - Kanghui Yan
- School of Information Engineering, Guangdong University of Technology, Guangzhou, 510006, China
| | - Dehan Luo
- School of Information Engineering, Guangdong University of Technology, Guangzhou, 510006, China
| | - Yanjun Zeng
- Biomedical Engineering Center, Beijing University of Technology, Beijing, 100022, China
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Ghoraani B, Krishnan S, Selvaraj RJ, Chauhan VS. T wave alternans evaluation using adaptive time-frequency signal analysis and non-negative matrix factorization. Med Eng Phys 2011; 33:700-11. [PMID: 21333581 DOI: 10.1016/j.medengphy.2011.01.007] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2010] [Revised: 01/04/2011] [Accepted: 01/06/2011] [Indexed: 11/25/2022]
Abstract
Each year 400,000 North Americans die from sudden cardiac death (SCD). Identifying those patients at risk of SCD remains a formidable challenge. T wave alternans (TWA) evaluation is emerging as an important tool to risk stratify patients with heart diseases. TWA is a heart rate dependent phenomenon that manifests on the surface electrocardiogram (ECG) as a change in the shape or amplitude of the T wave every second heart beat. The presence of large magnitude TWA often presages lethal ventricular arrhythmias. Because the TWA signal is typically in the microvolt range, accurate detection algorithms are required to control for confounding noise and changing physiological conditions (i.e. data nonstationarity). In this study, we address the limitations of two common TWA estimation methods, spectral method (SM) and modified moving average (MMA). To overcome their limitations, we propose a modified TWA quantification framework, called Adaptive SM, that uses non-linear time-frequency distribution (TFD). In order to increase the robustness of TWA detection in ambulatory ECGs, we also propose a new technique, called non-negative matrix factorization (NMF)-Adaptive SM. We present the analytical background of these methods, and evaluate their accuracy in detecting synthetic TWA signal in simulated and real-world ambulatory ECG recordings under conditions of noise and data non-stationarity. The results of the numerical simulations support the effectiveness of the proposed approaches for TWA analysis, which may ultimately improve SCD risk assessment.
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Affiliation(s)
- Behnaz Ghoraani
- Division of Cardiology, University Health Network, Toronto, Ontario, Canada.
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