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Feng W, Zhao Y, Peng H, Nie C, Lv H, Wang S, Feng H. FusionXNet: enhancing EEG-based seizure prediction with integrated convolutional and Transformer architectures. J Neural Eng 2025; 22:026067. [PMID: 40245880 DOI: 10.1088/1741-2552/adce33] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2024] [Accepted: 04/17/2025] [Indexed: 04/19/2025]
Abstract
Objective. Effective seizure prediction can reduce patient burden, improve clinical treatment accuracy, and lower healthcare costs. However, existing deep learning-based seizure prediction methods primarily rely on single models, which have limitations in feature extraction. This study aims to develop a hybrid model that integrates the advantages of convolutional neural networks (CNNs) and Transformer to enhance seizure prediction performance.Approach. We propose FusionXNet, a hybrid model inspired by CNNs and Transformer architectures, for seizure prediction. Specifically, we design a token synthesis unit to extract local features using convolution operations and capture global electroencephalography (EEG) representations via attention mechanisms. By merging local and global features extracted from the EEG segments, FusionXNet enhances feature representations, which are subsequently fed into a classifier for final seizure prediction.Main results. We evaluate the model on the publicly available Boston Children's Hospital and the Massachusetts Institute of Technology dataset, conducting segment-based and event-based experiments in both patient-specific and cross-patient settings. In event-based patient-specific experiments, FusionXNet achieves a sensitivity of 97.602% and a false positive rate (FPR) of 0.059 h-1. The results demonstrate that the proposed model effectively predicts seizures with high sensitivity and a low FPR, outperforming existing methods.Significance. The proposed FusionXNet model provides a robust and efficient approach for seizure prediction by leveraging both local and global feature extraction. The high sensitivity and low FPR indicate its potential for real-world clinical applications, improving patient management and reducing healthcare costs.
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Affiliation(s)
- Wenqian Feng
- School of Information Science and Engineering, Shandong Normal University, Jinan, Shandong 250358, People's Republic of China
| | - Yanna Zhao
- School of Information Science and Engineering, Shandong Normal University, Jinan, Shandong 250358, People's Republic of China
| | - Hao Peng
- School of Information Science and Engineering, Shandong Normal University, Jinan, Shandong 250358, People's Republic of China
| | - Chenxi Nie
- School of Information Science and Engineering, Shandong Normal University, Jinan, Shandong 250358, People's Republic of China
| | - Hongbin Lv
- School of Information Science and Engineering, Shandong Normal University, Jinan, Shandong 250358, People's Republic of China
| | - Shuai Wang
- School of Information Science and Engineering, Shandong Normal University, Jinan, Shandong 250358, People's Republic of China
| | - Hailing Feng
- School of Information Science and Engineering, Shandong Normal University, Jinan, Shandong 250358, People's Republic of China
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Leng J, Gao L, Jiang X, Lou Y, Sun Y, Wang C, Li J, Zhao H, Feng C, Xu F, Zhang Y, Jung TP. A multi-feature fusion graph attention network for decoding motor imagery intention in spinal cord injury patients. J Neural Eng 2024; 21:066044. [PMID: 39556943 DOI: 10.1088/1741-2552/ad9403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2024] [Accepted: 11/18/2024] [Indexed: 11/20/2024]
Abstract
Objective.Electroencephalogram (EEG) signals exhibit temporal-frequency-spatial multi-domain feature, and due to the nonplanar nature of the brain surface, the electrode distributions follow non-Euclidean topology. To fully resolve the EEG signals, this study proposes a temporal-frequency-spatial multi-domain feature fusion graph attention network (GAT) for motor imagery (MI) intention recognition in spinal cord injury (SCI) patients.Approach.The proposed model uses phase-locked value (PLV) to extract spatial phase connectivity information between EEG channels and continuous wavelet transform to extract valid EEG information in the time-frequency domain. It then models as a graph data structure containing multi-domain information. The gated recurrent unit and GAT learn EEG's dynamic temporal-spatial information. Finally, the fully connected layer outputs the MI intention recognition results.Main results.After 10 times 10-fold cross-validation, the proposed model can achieve an average accuracy of 95.82%. Furthermore, this study analyses the event-related desynchronization/event-related synchronization and PLV brain network to explore the brain activity of SCI patients during MI.Significance.This study confirms the potential of the proposed model in terms of EEG decoding performance and provides a reference for the mechanism of neural activity in SCI patients.
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Affiliation(s)
- Jiancai Leng
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Licai Gao
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Xiuquan Jiang
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Yitai Lou
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Yuan Sun
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Chen Wang
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Jun Li
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Heng Zhao
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Chao Feng
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Fangzhou Xu
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), No. 3501 University Road, Jinan, Shandong Province 250353, People's Republic of China
| | - Yang Zhang
- Rehabilitation and Physical Therapy Department, Shandong University of Traditional Chinese Medicine Affiliated Hospital, No. 42 Wenhuaxi Road, Jinan, Shandong Province 250011, People's Republic of China
| | - Tzyy-Ping Jung
- Swartz Center for Computational Neuroscience, Institute for Neural Computation, University of California San Diego, La Jolla, CA 92093, United States of America
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Wang X, Gao Z, Zhang M, Wang Y, Yang L, Lin J, Karkkainen T, Cong F. Combination of Channel Reordering Strategy and Dual CNN-LSTM for Epileptic Seizure Prediction Using Three iEEG Datasets. IEEE J Biomed Health Inform 2024; 28:6557-6567. [PMID: 39106143 DOI: 10.1109/jbhi.2024.3438829] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/09/2024]
Abstract
OBJECTIVE Intracranial electroencephalogram (iEEG) signals are generally recorded using multiple channels, and channel selection is therefore a significant means in studying iEEG-based seizure prediction. For n channels, [Formula: see text] channel cases can be generated for selection. However, by this means, an increase in n can cause an exponential increase in computational consumption, which may result in a failure of channel selection when n is too large. Hence, it is necessary to explore reasonable channel selection strategies under the premise of controlling computational consumption and ensuring high classification accuracy. Given this, we propose a novel method of channel reordering strategy combined with dual CNN-LSTM for effectively predicting seizures. METHOD First, for each patient with n channels, interictal and preictal iEEG samples from each single channel are input into the CNN-LSTM model for classification. Then, the F1-score of each single channel is calculated, and the channels are reordered in descending order according to the size of F1-scores (channel reordering strategy). Next, iEEG signals with an increasing number of channels are successively fed into the CNN-LSTM model for classification again. Finally, according to the classification results from n channel cases, the channel case with the highest classification rate is selected. RESULTS Our method is evaluated on the three iEEG datasets: the Freiburg, the SWEC-ETHZ and the American Epilepsy Society Seizure Prediction Challenge (AES-SPC). At the event-based level, the sensitivities of 100%, 100% and 90.5%, and the false prediction rates (FPRs) of 0.10/h, 0/h and 0.47/h, are achieved for the three datasets, respectively. Moreover, compared to an unspecific random predictor, our method also shows a better performance for all patients and dogs from the three datasets. At the segment-based level, the sensitivities-specificities-accuracies-AUCs of 88.1%-94.0%-93.5%-0.9101, 99.1%-99.7%-99.6%-0.9935, and 69.2%-79.9%-78.2%-0.7373, are attained for the three datasets, respectively. CONCLUSION Our method can effectively predict seizures and address the challenge of an excessive number of channels during channel selection.
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Ma H, Wu Y, Tang Y, Chen R, Xu T, Zhang W. Parallel Dual-Branch Fusion Network for Epileptic Seizure Prediction. Comput Biol Med 2024; 176:108565. [PMID: 38744007 DOI: 10.1016/j.compbiomed.2024.108565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 04/09/2024] [Accepted: 05/05/2024] [Indexed: 05/16/2024]
Abstract
Epilepsy is a prevalent chronic disorder of the central nervous system. The timely and accurate seizure prediction using the scalp Electroencephalography (EEG) signal can make patients adopt reasonable preventive measures before seizures occur and thus reduce harm to patients. In recent years, deep learning-based methods have made significant progress in solving the problem of epileptic seizure prediction. However, most current methods mainly focus on modeling short- or long-term dependence in EEG, while neglecting to consider both. In this study, we propose a Parallel Dual-Branch Fusion Network (PDBFusNet) which aims to combine the complementary advantages of Convolutional Neural Network (CNN) and Transformer. Specifically, the features of the EEG signal are first extracted using Mel Frequency Cepstral Coefficients (MFCC). Then, the extracted features are delivered into the parallel dual-branches to simultaneously capture the short- and long-term dependencies of EEG signal. Further, regarding the Transformer branch, a novel feature fusion module is developed to enhance the ability of utilizing time, frequency, and channel information. To evaluate our proposal, we perform sufficient experiments on the public epileptic EEG dataset CHB-MIT, where the accuracy, sensitivity, specificity and precision are 95.76%, 95.81%, 95.71% and 95.71%, respectively. PDBFusNet shows superior performance compared to state-of-the-art competitors, which confirms the effectiveness of our proposal.
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Affiliation(s)
- Hongcheng Ma
- School of Information and Communication Engineering, Hainan University, Haikou, China; State Key Laboratory of Multimodal Artificial Intelligence Systems, Institute of Automation, Chinese Academy of Sciences, Beijing, China.
| | - Yajing Wu
- State Key Laboratory of Multimodal Artificial Intelligence Systems, Institute of Automation, Chinese Academy of Sciences, Beijing, China.
| | - Yongqiang Tang
- State Key Laboratory of Multimodal Artificial Intelligence Systems, Institute of Automation, Chinese Academy of Sciences, Beijing, China.
| | - Rui Chen
- School of Information and Communication Engineering, Hainan University, Haikou, China; State Key Laboratory of Multimodal Artificial Intelligence Systems, Institute of Automation, Chinese Academy of Sciences, Beijing, China.
| | - Tao Xu
- Shanxi Key Laboratory of Big Data Analysis and Parallel Computing, Taiyuan University of Science and Technology, Taiyuan, China.
| | - Wensheng Zhang
- School of Information and Communication Engineering, Hainan University, Haikou, China; State Key Laboratory of Multimodal Artificial Intelligence Systems, Institute of Automation, Chinese Academy of Sciences, Beijing, China; School of Computer Science and Cyber Engineering, Guangzhou University, Guangzhou, China.
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Wang Y, Shi Y, He Z, Chen Z, Zhou Y. Combining temporal and spatial attention for seizure prediction. Health Inf Sci Syst 2023; 11:38. [PMID: 37637435 PMCID: PMC10447681 DOI: 10.1007/s13755-023-00239-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2022] [Accepted: 07/31/2023] [Indexed: 08/29/2023] Open
Abstract
Purpose Approximately 1% of the world population is currently suffering from epilepsy. Successful seizure prediction is necessary for those patients. Influenced by neurons in their own and surrounding locations, the electroencephalogram (EEG) signals collected by scalp electrodes carry information of spatiotemporal interactions. Therefore, it is a great challenge to exploit the spatiotemporal information of EEG signals fully. Methods In this paper, a new seizure prediction model called Gatformer is proposed by fusing the graph attention network (GAT) and the Transformer. The temporal and spatial attention are combined to extract EEG information from the perspective of spatiotemporal interactions. The model aims to explore the temporal dependence of single-channel EEG signals and the spatial correlations among multi-channel EEG signals. It can automatically identify the most noteworthy interaction in brain regions and achieve accurate seizure prediction. Results Compared with the baseline models, the performance of our model is significantly improved. The false prediction rate (FPR) on the private dataset is 0.0064/h. The average accuracy, specificity and sensitivity are 98.25%, 99.36% and 97.65%. Conclusion The proposed model is comparable to the state of the arts. Experiments on different datasets show that it has good robustness and generalization performance. The high sensitivity and low FPR prove that this model has great potential to realize clinical assistance for diagnosis and treatment.
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Affiliation(s)
- Yao Wang
- School of Biomedical Engineering, Sun Yat-sen University, Guangzhou, 510006 Guangdong China
| | - Yufei Shi
- Department of Medical Informatics, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080 Guangdong China
| | - Zhipeng He
- Department of Medical Informatics, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080 Guangdong China
| | - Ziyi Chen
- Department of Neurology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080 Guangdong China
| | - Yi Zhou
- Department of Medical Informatics, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, 510080 Guangdong China
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Zhang Y, Li X, Wang S, Shen H, Huang K. A robust seizure detection and prediction method with feature selection and spatio-temporal casual neural network model. J Neural Eng 2023; 20:056036. [PMID: 37793368 DOI: 10.1088/1741-2552/acfff5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Accepted: 10/04/2023] [Indexed: 10/06/2023]
Abstract
Objective.Epilepsy is a fairly common condition that affects the brain and causes frequent seizures. The sudden and recurring epilepsy brings a series of safety hazards to patients, which seriously affects the quality of their life. Therefore, real-time diagnosis of electroencephalogram (EEG) in epilepsy patients is of great significance. However, the conventional methods take in a tremendous amount of features to train the models, resulting in high computation cost and low portability. Our objective is to propose an efficient, light and robust seizure detecting and predicting algorithm.Approach.The algorithm is based on an interpretative feature selection method and spatial-temporal causal neural network (STCNN). The feature selection method eliminates the interference factors between different features and reduces the model size and training difficulties. The STCNN model takes both temporal and spatial information to accurately and dynamically track and diagnose the changing of the features. Considering the differences between medical application scenarios and patients, leave-one-out cross validation (LOOCV) and cross-patient validation (CPV) methods are used to conduct experiments on the dataset collected at the Children's Hospital Boston (CHB-MIT), Siena and Kaggle competition datasets.Main results.In LOOCV-based method, the detection accuracy and prediction sensitivity have been improved. A significant improvement is also achieved in the CPV-based method.Significance.The experimental results show that our proposed algorithm exhibits superior performance and robustness in seizure detection and prediction, which indicates it has higher capability to deal with different and complicated clinical situations.
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Affiliation(s)
- Yuanming Zhang
- Zhejiang University, 38 Zheda Road, Hangzhou, People's Republic of China
| | - Xin Li
- Zhejiang University, 38 Zheda Road, Hangzhou, People's Republic of China
| | - Shuang Wang
- Zhejiang University, 38 Zheda Road, Hangzhou, People's Republic of China
| | - Haibin Shen
- Zhejiang University, 38 Zheda Road, Hangzhou, People's Republic of China
| | - Kejie Huang
- Zhejiang University, 38 Zheda Road, Hangzhou, People's Republic of China
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Lu X, Wen A, Sun L, Wang H, Guo Y, Ren Y. An Epileptic Seizure Prediction Method Based on CBAM-3D CNN-LSTM Model. IEEE JOURNAL OF TRANSLATIONAL ENGINEERING IN HEALTH AND MEDICINE 2023; 11:417-423. [PMID: 37426305 PMCID: PMC10328218 DOI: 10.1109/jtehm.2023.3290036] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 05/30/2023] [Accepted: 06/18/2023] [Indexed: 07/11/2023]
Abstract
Epilepsy as a common disease of the nervous system, with high incidence, sudden and recurrent characteristics. Therefore, timely prediction of seizures and intervention treatment can significantly reduce the accidental injury of patients and protect the life and health of patients. Epilepsy seizures is the result of temporal and spatial evolution, Existing deep learning methods often ignore its spatial features, in order to make better use of the temporal and spatial characteristics of epileptic EEG signals. We propose a CBAM-3D CNN-LSTM model to predict epilepsy seizures. First, we apply short-time Fourier transform(STFT) to preprocess EEG signals. Secondly, the 3D CNN model was used to extract the features of preictal stage and interictal stage from the preprocessed signals. Thirdly, Bi-LSTM is connected to 3D CNN for classification. Finally CBAM is introduced into the model. Different attention is given to the data channel and space to extract key information, so that the model can accurately extract interictal and pre-ictal features. Our proposed approach achieved an accuracy of 97.95%, a sensitivity of 98.40%, and a false alarm rate of 0.017 h-1 on 11 patients from the public CHB-MIT scalp EEG dataset. Clinical and Translational Impact Statement-Timely prediction of epileptic seizures and intervention treatment can significantly reduce the accidental injury of patients and protect the life and health of patients.
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Affiliation(s)
- Xiang Lu
- College of Electronic and Information EngineeringShandong University of Science and TechnologyQingdaoShandong266590China
| | - Anhao Wen
- College of Electronic and Information EngineeringShandong University of Science and TechnologyQingdaoShandong266590China
| | - Lei Sun
- Taian Second Hospital of Traditional Chinese MedicineQingdaoShandong271000China
| | - Hao Wang
- College of Electronic and Information EngineeringShandong University of Science and TechnologyQingdaoShandong266590China
| | - Yinjing Guo
- College of Electronic and Information EngineeringShandong University of Science and TechnologyQingdaoShandong266590China
| | - Yande Ren
- The Affiliated Hospital of Qingdao UniversityQingdaoShandong266003China
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Ein Shoka AA, Dessouky MM, El-Sayed A, Hemdan EED. EEG seizure detection: concepts, techniques, challenges, and future trends. MULTIMEDIA TOOLS AND APPLICATIONS 2023:1-31. [PMID: 37362745 PMCID: PMC10071471 DOI: 10.1007/s11042-023-15052-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Revised: 08/07/2022] [Accepted: 02/27/2023] [Indexed: 06/28/2023]
Abstract
A central nervous system disorder is usually referred to as epilepsy. In epilepsy brain activity becomes abnormal, leading to times of abnormal behavior or seizures, and at times loss of awareness. Consequently, epilepsy patients face problems in daily life due to precautions they must take to adapt to this condition, particularly when they use heavy equipment, e.g., vehicle derivation. Epilepsy studies rely primarily on electroencephalography (EEG) signals to evaluate brain activity during seizures. It is troublesome and time-consuming to manually decide the location of seizures in EEG signals. The automatic detection framework is one of the principal tools to help doctors and patients take appropriate precautions. This paper reviews the epilepsy mentality disorder and the types of seizure, preprocessing operations that are performed on EEG data, a generally extracted feature from the signal, and a detailed view on classification procedures used in this problem and provide insights on the difficulties and future research directions in this innovative theme. Therefore, this paper presents a review of work on recent methods for the epileptic seizure process along with providing perspectives and concepts to researchers to present an automated EEG-based epileptic seizure detection system using IoT and machine learning classifiers for remote patient monitoring in the context of smart healthcare systems. Finally, challenges and open research points in EEG seizure detection are investigated.
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Affiliation(s)
- Athar A. Ein Shoka
- Faculty of Electronic Engineering, Computer Science and Engineering Department, Menoufia University, Menouf, Egypt
| | - Mohamed M. Dessouky
- Faculty of Electronic Engineering, Computer Science and Engineering Department, Menoufia University, Menouf, Egypt
- Department of Computer Science & Artificial Intelligence, College of Computer Science and Engineering, University of Jeddah, Jeddah, Saudi Arabia
| | - Ayman El-Sayed
- Faculty of Electronic Engineering, Computer Science and Engineering Department, Menoufia University, Menouf, Egypt
| | - Ezz El-Din Hemdan
- Faculty of Electronic Engineering, Computer Science and Engineering Department, Menoufia University, Menouf, Egypt
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Nazari J, Motie Nasrabadi A, Menhaj MB, Raiesdana S. Epilepsy seizure prediction with few-shot learning method. Brain Inform 2022; 9:21. [PMID: 36112246 PMCID: PMC9481757 DOI: 10.1186/s40708-022-00170-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 08/23/2022] [Indexed: 11/27/2022] Open
Abstract
Epileptic seizures prediction and timely alarms allow the patient to take effective and preventive actions. In this paper, a convolutional neural network (CNN) is proposed to diagnose the preictal period. Our goal is for those epileptic patients in whom seizures occur late and it is very challenging to record the preictal signal for them. In the previous works, generalized methods were inevitably used for this group of patients which were not very accurate. Our approach to solve this problem is to provide a few-shot learning method. This method, having the previous knowledge, is trained with only a small number of samples, learns new tasks and reduces the efforts to collect more data. Evaluation results for three patients from the CHB–MIT database, for a 10-min seizure prediction horizon (SPH) and a 20-min seizure occurrence period (SOP), averaged sensitivity of 95.70% and a false prediction rate (FPR) of 0.057/h and for the 5-min prediction horizon and the 25-min seizure occurrence period averaged sensitivity of 98.52% and a false prediction rate of (FPR) of 0.045/h. The proposed few-shot learning method, based on previous knowledge gained from the generalizable method, is regulated with a few new patient samples for the patient. Our results show that the accuracy obtained in this method is higher than the generalizable methods.
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Ren Z, Han X, Wang B. The performance evaluation of the state-of-the-art EEG-based seizure prediction models. Front Neurol 2022; 13:1016224. [PMID: 36504642 PMCID: PMC9732735 DOI: 10.3389/fneur.2022.1016224] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 11/09/2022] [Indexed: 11/26/2022] Open
Abstract
The recurrent and unpredictable nature of seizures can lead to unintentional injuries and even death. The rapid development of electroencephalogram (EEG) and Artificial Intelligence (AI) technologies has made it possible to predict seizures in real-time through brain-machine interfaces (BCI), allowing advanced intervention. To date, there is still much room for improvement in predictive seizure models constructed by EEG using machine learning (ML) and deep learning (DL). But, the most critical issue is how to improve the performance and generalization of the model, which involves some confusing conceptual and methodological issues. This review focuses on analyzing several factors affecting the performance of seizure prediction models, focusing on the aspects of post-processing, seizure occurrence period (SOP), seizure prediction horizon (SPH), and algorithms. Furthermore, this study presents some new directions and suggestions for building high-performance prediction models in the future. We aimed to clarify the concept for future research in related fields and improve the performance of prediction models to provide a theoretical basis for future applications of wearable seizure detection devices.
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Affiliation(s)
- Zhe Ren
- Department of Neurology, Zhengzhou University People's Hospital, Zhengzhou, China,Department of Neurology, Henan Provincial People's Hospital, Zhengzhou, China
| | - Xiong Han
- Department of Neurology, Zhengzhou University People's Hospital, Zhengzhou, China,Department of Neurology, Henan Provincial People's Hospital, Zhengzhou, China,*Correspondence: Xiong Han
| | - Bin Wang
- Department of Neurology, Zhengzhou University People's Hospital, Zhengzhou, China,Department of Neurology, Henan Provincial People's Hospital, Zhengzhou, China
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Xu M, Jie J, Zhou W, Zhou H, Jin S. Synthetic Epileptic Brain Activities with TripleGAN. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2022; 2022:2841228. [PMID: 36065378 PMCID: PMC9440850 DOI: 10.1155/2022/2841228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/18/2022] [Revised: 07/10/2022] [Accepted: 08/12/2022] [Indexed: 11/18/2022]
Abstract
Epilepsy is a chronic noninfectious disease caused by sudden abnormal discharge of brain neurons, which leads to intermittent brain dysfunction. It is also one of the most common neurological diseases in the world. The automatic detection of epilepsy based on electroencephalogram through machine learning, correlation analysis, and temporal-frequency analysis plays an important role in epilepsy early warning and automatic recognition. In this study, we propose a method to realize EEG epilepsy recognition by means of triple genetic antagonism network (GAN). TripleGAN is used for EEG temporal domain, frequency domain, and temporal-frequency domain, respectively. The experiment was conducted through CHB-MIT datasets, which operated at the latest level in the same industry in the world. In the CHB-MIT dataset, the classification accuracy, sensitivity, and specificity exceeded 1.19%, 1.36%, and 0.27%, respectively. The crossobject ratio exceeded 0.53%, 2.2%, and 0.37%, respectively. It shows that the established deep learning model of TripleGAN has a good effect on EEG epilepsy classification through simulation and classification optimization of real signals.
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Affiliation(s)
- Meiyan Xu
- Minnan Normal University, China
- OYMotion Technologies Co., Ltd., China
| | | | | | | | - Shunshan Jin
- Beidahuang Industry Group General Hospital, China
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12
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Mirchi N, Warsi NM, Zhang F, Wong SM, Suresh H, Mithani K, Erdman L, Ibrahim GM. Decoding Intracranial EEG With Machine Learning: A Systematic Review. Front Hum Neurosci 2022; 16:913777. [PMID: 35832872 PMCID: PMC9271576 DOI: 10.3389/fnhum.2022.913777] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Accepted: 05/31/2022] [Indexed: 11/13/2022] Open
Abstract
Advances in intracranial electroencephalography (iEEG) and neurophysiology have enabled the study of previously inaccessible brain regions with high fidelity temporal and spatial resolution. Studies of iEEG have revealed a rich neural code subserving healthy brain function and which fails in disease states. Machine learning (ML), a form of artificial intelligence, is a modern tool that may be able to better decode complex neural signals and enhance interpretation of these data. To date, a number of publications have applied ML to iEEG, but clinician awareness of these techniques and their relevance to neurosurgery, has been limited. The present work presents a review of existing applications of ML techniques in iEEG data, discusses the relative merits and limitations of the various approaches, and examines potential avenues for clinical translation in neurosurgery. One-hundred-seven articles examining artificial intelligence applications to iEEG were identified from 3 databases. Clinical applications of ML from these articles were categorized into 4 domains: i) seizure analysis, ii) motor tasks, iii) cognitive assessment, and iv) sleep staging. The review revealed that supervised algorithms were most commonly used across studies and often leveraged publicly available timeseries datasets. We conclude with recommendations for future work and potential clinical applications.
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Affiliation(s)
- Nykan Mirchi
- Faculty of Medicine, University of Toronto, Toronto, ON, Canada
| | - Nebras M. Warsi
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, ON, Canada
- Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada
| | - Frederick Zhang
- Faculty of Medicine, University of Ottawa, Ottawa, ON, Canada
| | - Simeon M. Wong
- Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada
- Program in Neuroscience and Mental Health, Hospital for Sick Children Research Institute, Toronto, ON, Canada
| | - Hrishikesh Suresh
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, ON, Canada
| | - Karim Mithani
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, ON, Canada
- Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada
| | - Lauren Erdman
- Vector Institute for Artificial Intelligence, MaRS Centre, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
- Hospital for Sick Children, Toronto, ON, Canada
| | - George M. Ibrahim
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, ON, Canada
- Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada
- Program in Neuroscience and Mental Health, Hospital for Sick Children Research Institute, Toronto, ON, Canada
- Institute of Medical Science, University of Toronto, Toronto, ON, Canada
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13
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Ong JS, Wong SN, Arulsamy A, Watterson JL, Shaikh MF. Medical Technology: A Systematic Review on Medical Devices Utilized for Epilepsy Prediction and Management. Curr Neuropharmacol 2022; 20:950-964. [PMID: 34749622 PMCID: PMC9881104 DOI: 10.2174/1570159x19666211108153001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Revised: 10/30/2021] [Accepted: 11/03/2021] [Indexed: 11/22/2022] Open
Abstract
BACKGROUND Epilepsy is a devastating neurological disorder that affects nearly 70 million people worldwide. Epilepsy causes uncontrollable, unprovoked and unpredictable seizures that reduce the quality of life of those afflicted, with 1-9 epileptic patient deaths per 1000 patients occurring annually due to sudden unexpected death in epilepsy (SUDEP). Predicting the onset of seizures and managing them may help patients from harming themselves and may improve their well-being. For a long time, electroencephalography (EEG) devices have been the mainstay for seizure detection and monitoring. This systematic review aimed to elucidate and critically evaluate the latest advancements in medical devices, besides EEG, that have been proposed for the management and prediction of epileptic seizures. A literature search was performed on three databases, PubMed, Scopus and EMBASE. METHODS Following title/abstract screening by two independent reviewers, 27 articles were selected for critical analysis in this review. RESULTS These articles revealed ambulatory, non-invasive and wearable medical devices, such as the in-ear EEG devices; the accelerometer-based devices and the subcutaneous implanted EEG devices might be more acceptable than traditional EEG systems. In addition, extracerebral signalbased devices may be more efficient than EEG-based systems, especially when combined with an intervention trigger. Although further studies may still be required to improve and validate these proposed systems before commercialization, these findings may give hope to epileptic patients, particularly those with refractory epilepsy, to predict and manage their seizures. CONCLUSION The use of medical devices for epilepsy may improve patients' independence and quality of life and possibly prevent sudden unexpected death in epilepsy (SUDEP).
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Affiliation(s)
- Jen Sze Ong
- Jeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway, Selangor, Malaysia
| | - Shuet Nee Wong
- School of Medicine, Queen’s University Belfast, Belfast, United Kingdom
| | - Alina Arulsamy
- Neuropharmacology Research Laboratory, Jeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway, Selangor, Malaysia
| | - Jessica L. Watterson
- Jeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway, Selangor, Malaysia
| | - Mohd. Farooq Shaikh
- Neuropharmacology Research Laboratory, Jeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway, Selangor, Malaysia,Address correspondence to this author at the Neuropharmacology Research Laboratory, Jeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Selangor, Malaysia; Tel/Fax: +60 3 5514 4483; E-mail:
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14
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Machine Learning-Based Epileptic Seizure Detection Methods Using Wavelet and EMD-Based Decomposition Techniques: A Review. SENSORS 2021; 21:s21248485. [PMID: 34960577 PMCID: PMC8703715 DOI: 10.3390/s21248485] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Revised: 12/13/2021] [Accepted: 12/14/2021] [Indexed: 11/25/2022]
Abstract
Epileptic seizures are temporary episodes of convulsions, where approximately 70 percent of the diagnosed population can successfully manage their condition with proper medication and lead a normal life. Over 50 million people worldwide are affected by some form of epileptic seizures, and their accurate detection can help millions in the proper management of this condition. Increasing research in machine learning has made a great impact on biomedical signal processing and especially in electroencephalogram (EEG) data analysis. The availability of various feature extraction techniques and classification methods makes it difficult to choose the most suitable combination for resource-efficient and correct detection. This paper intends to review the relevant studies of wavelet and empirical mode decomposition-based feature extraction techniques used for seizure detection in epileptic EEG data. The articles were chosen for review based on their Journal Citation Report, feature selection methods, and classifiers used. The high-dimensional EEG data falls under the category of ‘3N’ biosignals—nonstationary, nonlinear, and noisy; hence, two popular classifiers, namely random forest and support vector machine, were taken for review, as they are capable of handling high-dimensional data and have a low risk of over-fitting. The main metrics used are sensitivity, specificity, and accuracy; hence, some papers reviewed were excluded due to insufficient metrics. To evaluate the overall performances of the reviewed papers, a simple mean value of all metrics was used. This review indicates that the system that used a Stockwell transform wavelet variant as a feature extractor and SVM classifiers led to a potentially better result.
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15
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Wang Z, Yang J, Wu H, Zhu J, Sawan M. Power efficient refined seizure prediction algorithm based on an enhanced benchmarking. Sci Rep 2021; 11:23498. [PMID: 34873202 PMCID: PMC8648730 DOI: 10.1038/s41598-021-02798-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2021] [Accepted: 11/22/2021] [Indexed: 11/18/2022] Open
Abstract
Deep learning techniques have led to significant advancements in seizure prediction research. However, corresponding used benchmarks are not uniform in published results. Moreover, inappropriate training and evaluation processes used in various work create overfitted models, making prediction performance fluctuate or unreliable. In this study, we analyzed the various data preparation methods, dataset partition methods in related works, and explained the corresponding impacts to the prediction algorithms. Then we applied a robust processing procedure that considers the appropriate sampling parameters and the leave-one-out cross-validation method to avoid possible overfitting and provide prerequisites for ease benchmarking. Moreover, a deep learning architecture takes advantage of a one-dimension convolutional neural network and a bi-directional long short-term memory network is proposed for seizure prediction. The architecture achieves 77.6% accuracy, 82.7% sensitivity, and 72.4% specificity, and it outperforms the indicators of other prior-art works. The proposed model is also hardware friendly; it has 6.274 k parameters and requires only 12.825 M floating-point operations, which is advantageous for memory and power constrained device implementations.
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Affiliation(s)
- Ziyu Wang
- Cutting-Edge Net of Biomedical Research and INnovation (CenBRAIN), School of Engineering, Westlake University, Hangzhou, Zhejiang, China
| | - Jie Yang
- Cutting-Edge Net of Biomedical Research and INnovation (CenBRAIN), School of Engineering, Westlake University, Hangzhou, Zhejiang, China.
| | - Hemmings Wu
- Department of Neurosurgery, Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China
| | - Junming Zhu
- Department of Neurosurgery, Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China
| | - Mohamad Sawan
- Cutting-Edge Net of Biomedical Research and INnovation (CenBRAIN), School of Engineering, Westlake University, Hangzhou, Zhejiang, China.
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16
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Bhattacharya A, Baweja T, Karri SPK. Epileptic Seizure Prediction Using Deep Transformer Model. Int J Neural Syst 2021; 32:2150058. [PMID: 34720065 DOI: 10.1142/s0129065721500581] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The electroencephalogram (EEG) is the most promising and efficient technique to study epilepsy and record all the electrical activity going in our brain. Automated screening of epilepsy through data-driven algorithms reduces the manual workload of doctors to diagnose epilepsy. New algorithms are biased either towards signal processing or deep learning, which holds subjective advantages and disadvantages. The proposed pipeline is an end-to-end automated seizure prediction framework with a Fourier transform feature extraction and deep learning-based transformer model, a blend of signal processing and deep learning - this imbibes the potential features to automatically identify the attentive regions in EEG signals for effective screening. The proposed pipeline has demonstrated superior performance on the benchmark dataset with average sensitivity and false-positive rate per hour (FPR/h) as 98.46%, 94.83% and 0.12439, 0, respectively. The proposed work shows great results on the benchmark datasets and a big potential for clinics as a support system with medical experts monitoring the patients.
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Affiliation(s)
- Abhijeet Bhattacharya
- Electrical and Electronics Engineering, Bharati Vidyapeeth's College of Engineering, A-4 Block, Baba Ramdev Marg, Shiva Enclave, Paschim Vihar, New Delhi, 110063, India
| | - Tanmay Baweja
- Electrical and Electronics Engineering, Bharati Vidyapeeth's College of Engineering, A-4 Block, Baba Ramdev Marg, Shiva Enclave, Paschim Vihar, New Delhi, 110063, India
| | - S P K Karri
- Department of Electrical Engineering, National Institute of Technology, Andhra Pradesh, Tadepalligudem - 534101, India
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17
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Wang X, Zhang G, Wang Y, Yang L, Liang Z, Cong F. One-Dimensional Convolutional Neural Networks Combined with Channel Selection Strategy for Seizure Prediction Using Long-Term Intracranial EEG. Int J Neural Syst 2021; 32:2150048. [PMID: 34635034 DOI: 10.1142/s0129065721500489] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Seizure prediction using intracranial electroencephalogram (iEEG) has attracted an increasing attention during recent years. iEEG signals are commonly recorded in the form of multiple channels. Many previous studies generally used the iEEG signals of all channels to predict seizures, ignoring the consideration of channel selection. In this study, a method of one-dimensional convolutional neural networks (1D-CNN) combined with channel selection strategy was proposed for seizure prediction. First, we used 30-s sliding windows to segment the raw iEEG signals. Then, the 30-s iEEG segments, which were in three channel forms (single channel, channels only from seizure onset or free zone and all channels from seizure onset and free zones), were used as the inputs of 1D-CNN for classification, and the patient-specific model was trained. Finally, the channel form with the best classification was selected for each patient. The proposed method was evaluated on the Freiburg Hospital iEEG dataset. In the situation of seizure occurrence period (SOP) of 30[Formula: see text]min and seizure prediction horizon (SPH) of 5[Formula: see text]min, 98.60[Formula: see text] accuracy, 98.85[Formula: see text] sensitivity and 0.01/h false prediction rate (FPR) were achieved. In the situation of SOP of 60[Formula: see text]min and SPH of 5[Formula: see text]min, 98.32[Formula: see text] accuracy, 98.48[Formula: see text] sensitivity and 0.01/h FPR were attained. Compared with the many existing methods using the same iEEG dataset, our method showed a better performance.
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Affiliation(s)
- Xiaoshuang Wang
- School of Biomedical Engineering, Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian 116024, P. R. China.,Faculty of Information Technology, University of Jyväskylä, Jyväskylä 40014, Finland
| | - Guanghui Zhang
- School of Biomedical Engineering, Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian 116024, P. R. China.,Faculty of Information Technology, University of Jyväskylä, Jyväskylä 40014, Finland
| | - Ying Wang
- Department of Neurology and Psychiatry, First Affiliated Hospital, DaLian Medical University, Dalian, P. R. China
| | - Lin Yang
- Department of Neurology and Psychiatry, First Affiliated Hospital, DaLian Medical University, Dalian, P. R. China
| | - Zhanhua Liang
- Department of Neurology and Psychiatry, First Affiliated Hospital, DaLian Medical University, Dalian, P. R. China
| | - Fengyu Cong
- School of Biomedical Engineering, Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian 116024, P. R. China.,Faculty of Information Technology, University of Jyväskylä, Jyväskylä 40014, Finland.,School of Artificial Intelligence, Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian 116024, P. R. China.,Key Laboratory of Integrated Circuit and Biomedical Electronic System, Liaoning Province Dalian University of Technology, Dalian, P. R. China
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18
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Peng P, Xie L, Wei H. A Deep Fourier Neural Network for Seizure Prediction Using Convolutional Neural Network and Ratios of Spectral Power. Int J Neural Syst 2021; 31:2150022. [PMID: 33970057 DOI: 10.1142/s0129065721500222] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Epileptic seizure prediction is one of the most used therapeutic adjuvant strategies for drug-resistant epilepsy. Conventional methods usually adopt handcrafted features and manual parameter setting. The over-reliance on the expertise of specialists may lead to weak exploitation of features and low popularization of clinical application. This paper proposes a novel parameterless patient-specific method based on Fourier Neural Network (FNN), where the Fourier transform and backpropagation learning are synthesized to make the predictor more efficient and practical. The employment of FNN is the first attempt in the field of seizure prediction due to its automatic extraction of immanent spectra in epileptic signals. Despite the self-adaptive superiority of FNN, we introduce Convolutional Neural Network (CNN) to further improve its search capability in high-dimensional feature spaces. The study also develops a multi-layer module to estimate spectral power ratios of raw recordings, which optimizes the prediction by enhancing feature diversity. Based on these modules, this paper proposes a two-channel deep neural network: Fourier Ratio Convolutional Neural Network (FRCNN). To demonstrate the reliability of the model, we explain the mathematical meaning of hidden-layer neurons in FRCNN theoretically. This approach is evaluated on both intracranial and scalp EEG datasets. It shows that the predictor achieved a sensitivity of 91.2% and a false prediction rate (FPR) of 0.06[Formula: see text]h[Formula: see text] across intracranial subjects and a sensitivity of 85.4% and an FPR of 0.14[Formula: see text]h[Formula: see text] over scalp subjects. The results indicate that FRCNN enables the convenience of epilepsy treatments while preserving a high degree of precision. In the end, a detailed comparison with the previous methods demonstrates that FRCNN has achieved higher performance and generalization ability.
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Affiliation(s)
- Peizhen Peng
- Key Laboratory of Measurement and Control of CSE, Ministry of Education, School of Automation, Southeast University, Nanjing 210096, P. R. China
| | - Liping Xie
- Key Laboratory of Measurement and Control of CSE, Ministry of Education, School of Automation, Southeast University, Nanjing 210096, P. R. China
| | - Haikun Wei
- Key Laboratory of Measurement and Control of CSE, Ministry of Education, School of Automation, Southeast University, Nanjing 210096, P. R. China
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19
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Amini M, Pedram MM, Moradi A, Ouchani M. Diagnosis of Alzheimer's Disease by Time-Dependent Power Spectrum Descriptors and Convolutional Neural Network Using EEG Signal. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2021; 2021:5511922. [PMID: 33981355 PMCID: PMC8088352 DOI: 10.1155/2021/5511922] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Revised: 03/26/2021] [Accepted: 04/07/2021] [Indexed: 12/22/2022]
Abstract
Using strategies that obtain biomarkers where early symptoms coincide, the early detection of Alzheimer's disease and its complications is essential. Electroencephalogram is a technology that allows thousands of neurons with equal spatial orientation of the duration of cerebral cortex electrical activity to be registered by postsynaptic potential. Therefore, in this paper, the time-dependent power spectrum descriptors are used to diagnose the electroencephalogram signal function from three groups: mild cognitive impairment, Alzheimer's disease, and healthy control test samples. The final feature used in three modes of traditional classification methods is recorded: k-nearest neighbors, support vector machine, linear discriminant analysis approaches, and documented results. Finally, for Alzheimer's disease patient classification, the convolutional neural network architecture is presented. The results are indicated using output assessment. For the convolutional neural network approach, the accurate meaning of accuracy is 82.3%. 85% of mild cognitive impairment cases are accurately detected in-depth, but 89.1% of the Alzheimer's disease and 75% of the healthy population are correctly diagnosed. The presented convolutional neural network outperforms other approaches because performance and the k-nearest neighbors' approach is the next target. The linear discriminant analysis and support vector machine were at the low area under the curve values.
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Affiliation(s)
- Morteza Amini
- Department of Cognitive Modeling, Institute for Cognitive Science Studies, Shahid Beheshti University, Tehran, Iran
| | - Mir Mohsen Pedram
- Department of Electrical and Computer Engineering, Faculty of Engineering, Kharazmi University, Tehran, Iran
- Department of Cognitive Modeling, Institute for Cognitive Science Studies, Tehran, Iran
| | - AliReza Moradi
- Department of Clinical Psychology, Faculty of Psychology and Educational Science, Kharazmi University, Tehran, Iran
- Department of Cognitive Psychology, Institute for Cognitive Science Studies, Tehran, Iran
| | - Mahshad Ouchani
- Institute for Cognitive and Brain Science, Shahid Beheshti University, Tehran, Iran
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20
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Payne DE, Dell KL, Karoly PJ, Kremen V, Gerla V, Kuhlmann L, Worrell GA, Cook MJ, Grayden DB, Freestone DR. Identifying seizure risk factors: A comparison of sleep, weather, and temporal features using a Bayesian forecast. Epilepsia 2020; 62:371-382. [PMID: 33377501 DOI: 10.1111/epi.16785] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2020] [Revised: 11/15/2020] [Accepted: 11/16/2020] [Indexed: 11/30/2022]
Abstract
OBJECTIVE Most seizure forecasting algorithms have relied on features specific to electroencephalographic recordings. Environmental and physiological factors, such as weather and sleep, have long been suspected to affect brain activity and seizure occurrence but have not been fully explored as prior information for seizure forecasts in a patient-specific analysis. The study aimed to quantify whether sleep, weather, and temporal factors (time of day, day of week, and lunar phase) can provide predictive prior probabilities that may be used to improve seizure forecasts. METHODS This study performed post hoc analysis on data from eight patients with a total of 12.2 years of continuous intracranial electroencephalographic recordings (average = 1.5 years, range = 1.0-2.1 years), originally collected in a prospective trial. Patients also had sleep scoring and location-specific weather data. Histograms of future seizure likelihood were generated for each feature. The predictive utility of individual features was measured using a Bayesian approach to combine different features into an overall forecast of seizure likelihood. Performance of different feature combinations was compared using the area under the receiver operating curve. Performance evaluation was pseudoprospective. RESULTS For the eight patients studied, seizures could be predicted above chance accuracy using sleep (five patients), weather (two patients), and temporal features (six patients). Forecasts using combined features performed significantly better than chance in six patients. For four of these patients, combined forecasts outperformed any individual feature. SIGNIFICANCE Environmental and physiological data, including sleep, weather, and temporal features, provide significant predictive information on upcoming seizures. Although forecasts did not perform as well as algorithms that use invasive intracranial electroencephalography, the results were significantly above chance. Complementary signal features derived from an individual's historic seizure records may provide useful prior information to augment traditional seizure detection or forecasting algorithms. Importantly, many predictive features used in this study can be measured noninvasively.
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Affiliation(s)
- Daniel E Payne
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, Victoria, Australia.,Department of Medicine, St Vincent's Hospital, The University of Melbourne, Melbourne, Victoria, Australia
| | - Katrina L Dell
- Department of Medicine, St Vincent's Hospital, The University of Melbourne, Melbourne, Victoria, Australia
| | - Phillipa J Karoly
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, Victoria, Australia.,Graeme Clark Institute, The University of Melbourne, Melbourne, Victoria, Australia
| | - Vaclav Kremen
- Department of Neurology, Mayo Clinic, Rochester, MN, USA.,Czech Institute of Informatics, Robotics, and Cybernetics, Czech Technical University in Prague, Prague, Czech Republic
| | - Vaclav Gerla
- Czech Institute of Informatics, Robotics, and Cybernetics, Czech Technical University in Prague, Prague, Czech Republic
| | - Levin Kuhlmann
- Department of Medicine, St Vincent's Hospital, The University of Melbourne, Melbourne, Victoria, Australia.,Department of Data Science and AI, Faculty of IT, Monash University, Clayton, Victoria, Australia
| | | | - Mark J Cook
- Department of Medicine, St Vincent's Hospital, The University of Melbourne, Melbourne, Victoria, Australia.,Graeme Clark Institute, The University of Melbourne, Melbourne, Victoria, Australia
| | - David B Grayden
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, Victoria, Australia.,Department of Medicine, St Vincent's Hospital, The University of Melbourne, Melbourne, Victoria, Australia
| | - Dean R Freestone
- Department of Medicine, St Vincent's Hospital, The University of Melbourne, Melbourne, Victoria, Australia
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21
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Yang J, Sawan M. From Seizure Detection to Smart and Fully Embedded Seizure Prediction Engine: A Review. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2020; 14:1008-1023. [PMID: 32822304 DOI: 10.1109/tbcas.2020.3018465] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Recent review papers have investigated seizure prediction, creating the possibility of preempting epileptic seizures. Correct seizure prediction can significantly improve the standard of living for the majority of epileptic patients, as the unpredictability of seizures is a major concern for them. Today, the development of algorithms, particularly in the field of machine learning, enables reliable and accurate seizure prediction using desktop computers. However, despite extensive research effort being devoted to developing seizure detection integrated circuits (ICs), dedicated seizure prediction ICs have not been developed yet. We believe that interdisciplinary study of system architecture, analog and digital ICs, and machine learning algorithms can promote the translation of scientific theory to a more realistic intelligent, integrated, and low-power system that can truly improve the standard of living for epileptic patients. This review explores topics ranging from signal acquisition analog circuits to classification algorithms and dedicated digital signal processing circuits for detection and prediction purposes, to provide a comprehensive and useful guideline for the construction, implementation and optimization of wearable and integrated smart seizure prediction systems.
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22
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Comparison of Frontal-Temporal Channels in Epilepsy Seizure Prediction Based on EEMD-ReliefF and DNN. COMPUTERS 2020. [DOI: 10.3390/computers9040078] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Epilepsy patients who do not have their seizures controlled with medication or surgery live in constant fear. The psychological burden of uncertainty surrounding the occurrence of random seizures is one of the most stressful and debilitating aspects of the disease. Despite the research progress in this field, there is a need for a non-invasive prediction system that helps disrupt the seizure epileptiform. Electroencephalogram (EEG) signals are non-stationary, nonlinear and vary with each patient and every recording. Full use of the non-invasive electrode channels is impractical for real-time use. We propose two frontal-temporal electrode channels based on ensemble empirical mode decomposition (EEMD) and Relief methods to address these challenges. The EEMD decomposes the segmented data frame in the ictal state into its intrinsic mode functions, and then we apply Relief to select the most relevant oscillatory components. A deep neural network (DNN) model learns these features to perform seizure prediction and early detection of patient-specific EEG recordings. The model yields an average sensitivity and specificity of 86.7% and 89.5%, respectively. The two-channel model shows the ability to capture patterns from brain locations for non-fontal-temporal seizures.
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23
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Krishnan PT, Joseph Raj AN, Balasubramanian P, Chen Y. Schizophrenia detection using MultivariateEmpirical Mode Decomposition and entropy measures from multichannel EEG signal. Biocybern Biomed Eng 2020. [DOI: 10.1016/j.bbe.2020.05.008] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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24
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Support Vector Machine-Based EMG Signal Classification Techniques: A Review. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app9204402] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
This paper gives an overview of the different research works related to electromyographic signals (EMG) classification based on Support Vector Machines (SVM). The article summarizes the techniques used to make the classification in each reference. Furthermore, it includes the obtained accuracy, the number of signals or channels used, the way the authors made the feature vector, and the type of kernels used. Hence, this article also includes a compilation about the bands used to filter signals, the number of signals recommended, the most commonly used sampling frequencies, and certain features that can create the characteristics of the vector. This research gathers articles related to different kinds of SVM-based classification and other tools for signal processing in the field.
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25
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Liu G, Zhou W, Geng M. Automatic Seizure Detection Based on S-Transform and Deep Convolutional Neural Network. Int J Neural Syst 2019; 30:1950024. [DOI: 10.1142/s0129065719500242] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Automatic seizure detection is significant for the diagnosis of epilepsy and reducing the massive workload of reviewing continuous EEGs. In this work, a novel approach, combining Stockwell transform (S-transform) with deep Convolutional Neural Networks (CNN), is proposed to detect seizure onsets in long-term intracranial EEG recordings. Primarily, raw EEG data is filtered with wavelet decomposition. Then, S-transform is used to obtain a proper time-frequency representation of each EEG segment. After that, a 15-layer deep CNN using dropout and batch normalization serves as a robust feature extractor and classifier. Finally, smoothing and collar technique are applied to the outputs of CNN to improve the detection accuracy and reduce the false detection rate (FDR). The segment-based and event-based evaluation assessments and receiver operating characteristic (ROC) curves are employed for the performance evaluation on a public EEG database containing 21 patients. A segment-based sensitivity of 97.01% and a specificity of 98.12% are yielded. For the event-based assessment, this method achieves a sensitivity of 95.45% with an FDR of 0.36/h.
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Affiliation(s)
- Guoyang Liu
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
| | - Weidong Zhou
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
| | - Minxing Geng
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
- Shenzhen Institute of Shandong University, Shenzhen 518057, P. R. China
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26
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Zhang Y, Guo Y, Yang P, Chen W, Lo B. Epilepsy Seizure Prediction on EEG Using Common Spatial Pattern and Convolutional Neural Network. IEEE J Biomed Health Inform 2019; 24:465-474. [PMID: 31395568 DOI: 10.1109/jbhi.2019.2933046] [Citation(s) in RCA: 97] [Impact Index Per Article: 16.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Epilepsy seizure prediction paves the way of timely warning for patients to take more active and effective intervention measures. Compared to seizure detection that only identifies the inter-ictal state and the ictal state, far fewer researches have been conducted on seizure prediction because the high similarity makes it challenging to distinguish between the pre-ictal state and the inter-ictal state. In this paper, a novel solution on seizure prediction is proposed using common spatial pattern (CSP) and convolutional neural network (CNN). Firstly, artificial pre-ictal EEG signals based on the original ones are generated by combining the segmented pre-ictal signals to solve the trial imbalance problem between the two states. Secondly, a feature extractor employing wavelet packet decomposition and CSP is designed to extract the distinguishing features in both the time domain and the frequency domain. It can improve overall accuracy while reducing the training time. Finally, a shallow CNN is applied to discriminate between the pre-ictal state and the inter-ictal state. Our proposed solution is evaluated on 23 patients' data from Boston Children's Hospital-MIT scalp EEG dataset by employing a leave-one-out cross-validation, and it achieves a sensitivity of 92.2% and false prediction rate of 0.12/h. Experimental result demonstrates that the proposed approach outperforms most state-of-the-art methods.
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Parhi KK, Zhang Z. Discriminative Ratio of Spectral Power and Relative Power Features Derived via Frequency-Domain Model Ratio With Application to Seizure Prediction. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2019; 13:645-657. [PMID: 31095498 DOI: 10.1109/tbcas.2019.2917184] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The ratio of spectral power in two different bands and relative band power have been shown to be sometimes more discriminative features than the spectral power in a specific band for binary classification of a time series for seizure prediction. However, why and which ratio of spectral power and relative power features are better discriminators than a band power have not been understood. While general answers to why and which are difficult, this paper partially addresses the answer to these questions. Using auto-regressive modeling, this paper, for the first time, theoretically explains that for high signal-to-noise ratio (SNR) cases, the ratio features may sometime amplify the discriminability of one of the two states in a time series, as compared with a band power. This paper, also for the first time, introduces a novel frequency-domain model ratio (FDMR) that can be used to select the two frequency bands. The FDMR computes the ratio of the frequency responses of the two auto-regressive model filters that correspond to two different states. It is shown that the ratio implicitly cancels the effect of change of variance of the white noise that is input to the auto-regressive model in a non-stationary environment for high SNR conditions. It is also shown that under certain sufficient but not necessary conditions, the ratio of the spectral power and the relative band power, i.e., the band power divided by the total power spectral density, can be better discriminators than band power. Synthesized data and scalp EEG data from the MIT Physionet for patient-specific seizure prediction are used to explain why the ratios of spectral power obtained by a ranking algorithm in the prior literature satisfy the sufficient conditions for amplification of the ratio feature derived in this paper.
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Truong ND, Zhou L, Kavehei O. Semi-supervised Seizure Prediction with Generative Adversarial Networks. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2019; 2019:2369-2372. [PMID: 31946376 DOI: 10.1109/embc.2019.8857755] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Many outstanding studies have reported promising results in seizure prediction that is considered one of the most challenging predictive data analysis. This is mainly because electroencephalogram (EEG) bio-signal intensity is very small, in μV range, and there are significant sensing difficulties given physiological and non-physiological artifacts. In this article, we propose an approach that can make use of not only labeled EEG signals but also the unlabeled ones which are more accessible. We also suggest the use of data fusion to further improve the seizure prediction accuracy. Data fusion in our vision includes EEG signals, cardiogram signals, body temperature and time. We use the short-time Fourier transform on 28-s EEG windows as a pre-processing step. A generative adversarial network (GAN) is trained in an unsupervised manner where information of seizure onset is disregarded. The trained Discriminator of the GAN is then used as feature extractor. Features generated by the feature extractor are classified by two fully-connected layers (can be replaced by any classifier) for the labeled EEG signals. This semi-supervised seizure prediction method achieves area under the operating characteristic curve (AUC) of 77.68% and 75.47% for the CHBMIT scalp EEG dataset and the Freiburg Hospital intracranial EEG dataset, respectively. Unsupervised training without the need of labeling is important because not only it can be performed in real-time during EEG signal recording, but also it does not require feature engineering effort for each patient.
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Yıldırım Ö, Baloglu UB, Acharya UR. A deep convolutional neural network model for automated identification of abnormal EEG signals. Neural Comput Appl 2018. [DOI: 10.1007/s00521-018-3889-z] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Truong ND, Nguyen AD, Kuhlmann L, Bonyadi MR, Yang J, Ippolito S, Kavehei O. Convolutional neural networks for seizure prediction using intracranial and scalp electroencephalogram. Neural Netw 2018; 105:104-111. [DOI: 10.1016/j.neunet.2018.04.018] [Citation(s) in RCA: 246] [Impact Index Per Article: 35.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2018] [Revised: 04/24/2018] [Accepted: 04/26/2018] [Indexed: 11/24/2022]
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Yang Y, Zhou M, Niu Y, Li C, Cao R, Wang B, Yan P, Ma Y, Xiang J. Epileptic Seizure Prediction Based on Permutation Entropy. Front Comput Neurosci 2018; 12:55. [PMID: 30072886 PMCID: PMC6060283 DOI: 10.3389/fncom.2018.00055] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2018] [Accepted: 06/28/2018] [Indexed: 11/23/2022] Open
Abstract
Epilepsy is a chronic non-communicable disorder of the brain that affects individuals of all ages. It is caused by a sudden abnormal discharge of brain neurons leading to temporary dysfunction. In this regard, if seizures could be predicted a reasonable period of time before their occurrence, epilepsy patients could take precautions against them and improve their safety and quality of life. However, the potential that permutation entropy(PE) can be applied in human epilepsy prediction from intracranial electroencephalogram (iEEG) recordings remains unclear. Here, we described the novel application of PE to track the dynamical changes of human brain activity from iEEG recordings for the epileptic seizure prediction. The iEEG signals of 19 patients were obtained from the Epilepsy Centre at the University Hospital of Freiburg. After preprocessing, PE was extracted in a sliding time window, and a support vector machine (SVM) was employed to discriminate cerebral state. Then a two-step post-processing method was applied for the purpose of prediction. The results showed that we obtained an average sensitivity (SS) of 94% and false prediction rates (FPR) with 0.111 h-1. The best results with SS of 100% and FPR of 0 h-1 were achieved for some patients. The average prediction horizon was 61.93 min, leaving sufficient treatment time before a seizure. These results indicated that applying PE as a feature to extract information and SVM for classification could predict seizures, and the presented method shows great potential in clinical seizure prediction for human.
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Affiliation(s)
- Yanli Yang
- College of Information and Computer Science, Taiyuan University of Technology, Taiyuan, China
| | - Mengni Zhou
- College of Information and Computer Science, Taiyuan University of Technology, Taiyuan, China
| | - Yan Niu
- College of Information and Computer Science, Taiyuan University of Technology, Taiyuan, China
| | - Conggai Li
- Centre for AI, Faculty of Engineering and IT, University of Technology Sydney, Sydney, NSW, Australia
| | - Rui Cao
- Software College, Taiyuan University of Technology, Taiyuan, China
| | - Bin Wang
- College of Information and Computer Science, Taiyuan University of Technology, Taiyuan, China
| | - Pengfei Yan
- College of Information and Computer Science, Taiyuan University of Technology, Taiyuan, China
| | - Yao Ma
- College of Information and Computer Science, Taiyuan University of Technology, Taiyuan, China
| | - Jie Xiang
- College of Information and Computer Science, Taiyuan University of Technology, Taiyuan, China
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Integration of 24 Feature Types to Accurately Detect and Predict Seizures Using Scalp EEG Signals. SENSORS 2018; 18:s18051372. [PMID: 29710763 PMCID: PMC5982573 DOI: 10.3390/s18051372] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/04/2018] [Revised: 04/23/2018] [Accepted: 04/26/2018] [Indexed: 01/22/2023]
Abstract
The neurological disorder epilepsy causes substantial problems to the patients with uncontrolled seizures or even sudden deaths. Accurate detection and prediction of epileptic seizures will significantly improve the life quality of epileptic patients. Various feature extraction algorithms were proposed to describe the EEG signals in frequency or time domains. Both invasive intracranial and non-invasive scalp EEG signals have been screened for the epileptic seizure patterns. This study extracted a comprehensive list of 24 feature types from the scalp EEG signals and found 170 out of the 2794 features for an accurate classification of epileptic seizures. An accuracy (Acc) of 99.40% was optimized for detecting epileptic seizures from the scalp EEG signals. A balanced accuracy (bAcc) was calculated as the average of sensitivity and specificity and our seizure detection model achieved 99.61% in bAcc. The same experimental procedure was applied to predict epileptic seizures in advance, and the model achieved Acc = 99.17% for predicting epileptic seizures 10 s before happening.
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Sharma P, Kumari A, Gulati A, Krishnamurthy S, Hemalatha S. Chrysin isolated from Pyrus pashia fruit ameliorates convulsions in experimental animals. Nutr Neurosci 2017; 22:569-577. [PMID: 29284373 DOI: 10.1080/1028415x.2017.1418786] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Objective: The traditional use of the ethanolic extract of the fruit of Pyrus pashia (EPP) as a potential anticonvulsant was validated using experimental animal models. Furthermore, the anticonvulsant activity of isolated chrysin was investigated against experimental animal models to draw a possible therapeutic mechanism of EPP. Additionally, the safety profile of chrysin was evaluated to explore the possible therapeutic alternative in the management of epilepsy. Method: The anticonvulsant activity in terms of duration of onset of hind limb tonic extension and convulsion of standardized EPP was evaluated against maximal electroshock (MES) and pentylenetetrazole (PTZ) model of experimental epilepsy respectively. Furthermore, the anticonvulsant activity and electrophysiological properties of chrysin was investigated in addition to antioxidant activity against PTZ-induced convulsion in experimental animals. Moreover, the neurotoxic profile of the chrysin was assessed in terms of duration of movement and running in photoactometer and rotarod apparatus, respectively. Results: EPP (100, 200, and 400 mg/kg) exhibited significant anticonvulsant activity against an acute model of MES and PTZ-induced convulsions in experimental animals. Furthermore, chrysin (2.5, 5, and 10 mg/kg) also exhibited significant anticonvulsant activity against PTZ-induced convulsions in rats. In addition, chrysin did not exhibit sedative-like behavior in experimental rodents. Discussion: EPP could be considered as a potential and alternative therapeutic option in the management of epilepsy.
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Affiliation(s)
- Priyanka Sharma
- a Department of Pharmaceutical Engineering & Technology , Indian Institute of Technology (Banaras Hindu University) , Varanasi , India
| | - Amita Kumari
- b Academy of Scientific and Innovative Research , CSIR-Institute of Himalayan Bioresource Technology , Palampur , India
| | - Ashu Gulati
- b Academy of Scientific and Innovative Research , CSIR-Institute of Himalayan Bioresource Technology , Palampur , India
| | - Sairam Krishnamurthy
- a Department of Pharmaceutical Engineering & Technology , Indian Institute of Technology (Banaras Hindu University) , Varanasi , India
| | - Siva Hemalatha
- a Department of Pharmaceutical Engineering & Technology , Indian Institute of Technology (Banaras Hindu University) , Varanasi , India
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