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Huda NU, Salam AA, Alghamdi NS, Zeb J, Akram MU. Proliferative Diabetic Retinopathy Diagnosis Using Varying-Scales Filter Banks and Double-Layered Thresholding. Diagnostics (Basel) 2023; 13:2231. [PMID: 37443625 DOI: 10.3390/diagnostics13132231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Revised: 06/09/2023] [Accepted: 06/10/2023] [Indexed: 07/15/2023] Open
Abstract
Diabetic retinopathy is one of the abnormalities of the retina in which a diabetic patient suffers from severe vision loss due to an affected retina. Proliferative diabetic retinopathy (PDR) is the final and most critical stage of diabetic retinopathy. Abnormal and fragile blood vessels start to grow on the surface of the retina at this stage. It causes retinal detachment, which may lead to complete blindness in severe cases. In this paper, a novel method is proposed for the detection and grading of neovascularization. The proposed system first performs pre-processing on input retinal images to enhance the vascular pattern, followed by blood vessel segmentation and optic disc localization. Then various features are tested on the candidate regions with different thresholds. In this way, positive and negative advanced diabetic retinopathy cases are separated. Optic disc coordinates are applied for the grading of neovascularization as NVD or NVE. The proposed algorithm improves the quality of automated diagnostic systems by eliminating normal blood vessels and exudates that might cause hindrances in accurate disease detection, thus resulting in more accurate detection of abnormal blood vessels. The evaluation of the proposed system has been carried out using performance parameters such as sensitivity, specificity, accuracy, and positive predictive value (PPV) on a publicly available standard retinal image database and one of the locally available databases. The proposed algorithm gives an accuracy of 98.5% and PPV of 99.8% on MESSIDOR and an accuracy of 96.5% and PPV of 100% on the local database.
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Affiliation(s)
- Noor Ul Huda
- Center for Advanced Studies in Telecommunications (CAST), COMSATS Institute of Information Technology, Islamabad 45550, Pakistan
| | - Anum Abdul Salam
- Computer and Software Engineering Department, College of Electrical and Mechanical Engineering, National University of Sciences and Technology, Islamabad 24090, Pakistan
| | - Norah Saleh Alghamdi
- Department of Computer Sciences, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia
| | - Jahan Zeb
- Computer and Software Engineering Department, College of Electrical and Mechanical Engineering, National University of Sciences and Technology, Islamabad 24090, Pakistan
| | - Muhammad Usman Akram
- Computer and Software Engineering Department, College of Electrical and Mechanical Engineering, National University of Sciences and Technology, Islamabad 24090, Pakistan
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Guidance Image-Based Enhanced Matched Filter with Modified Thresholding for Blood Vessel Extraction. Symmetry (Basel) 2022. [DOI: 10.3390/sym14020194] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Fundus images have been established as an important factor in analyzing and recognizing many cardiovascular and ophthalmological diseases. Consequently, precise segmentation of blood using computer vision is vital in the recognition of ailments. Although clinicians have adopted computer-aided diagnostics (CAD) in day-to-day diagnosis, it is still quite difficult to conduct fully automated analysis based exclusively on information contained in fundus images. In fundus image applications, one of the methods for conducting an automatic analysis is to ascertain symmetry/asymmetry details from corresponding areas of the retina and investigate their association with positive clinical findings. In the field of diabetic retinopathy, matched filters have been shown to be an established technique for vessel extraction. However, there is reduced efficiency in matched filters due to noisy images. In this work, a joint model of a fast guided filter and a matched filter is suggested for enhancing abnormal retinal images containing low vessel contrasts. Extracting all information from an image correctly is one of the important factors in the process of image enhancement. A guided filter has an excellent property in edge-preserving, but still tends to suffer from halo artifacts near the edges. Fast guided filtering is a technique that subsamples the filtering input image and the guidance image and calculates the local linear coefficients for upsampling. In short, the proposed technique applies a fast guided filter and a matched filter for attaining improved performance measures for vessel extraction. The recommended technique was assessed on DRIVE and CHASE_DB1 datasets and achieved accuracies of 0.9613 and 0.960, respectively, both of which are higher than the accuracy of the original matched filter and other suggested vessel segmentation algorithms.
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Basha SS, Ramanaiah KV. Optimal Feature Selection for Diagnosing Diabetic Retinopathy Using FireFly Migration Operator-Based Monarch Butterfly Optimization. Crit Rev Biomed Eng 2022; 50:21-37. [PMID: 36374821 DOI: 10.1615/critrevbiomedeng.2022041571] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
In recent years, diabetic retinopathy (DR) needs to be focused with the intention of developing accurate and effective approaches by accomplishing the existing challenges in the traditional models. With this objective, this paper aims to introduce an effective diagnosis system by utilizing retinal fundus images. The implementation of this diagnosis model incorporates 4 stages like (i) preprocessing, (ii) blood vessel segmentation, (iii) feature extraction, as well as (iv) classification. Originally, the median filter as well as contrast limited adaptive histogram equalization (CLAHE) help to preprocess the image. Moreover, the Fuzzy C Mean (FCM) thresholding is applied for blood vessel segmentation, which generates stochastic clustering of pixels to obtain enhanced threshold values. Further, feature extraction is accomplished by utilizing gray-level run-length matrix (GLRM), local, and morphological transformation-based features. Furthermore, a deep learning (DL) model known as convolutional neural network (CNN) is employed for the diagnosis or classification purpose. As a main novelty, this paper introduces an optimal feature selection as well as classification model. Further, the feature selection is done optimally by FireFly Migration Operator-based Monarch Butterfly Optimization (FM-MBO) which hybridized of the monarch butterfly optimization (MBO) and fire fly (FF) algorithms as the entire adopted extracted features attain higher feature length. Moreover, the proposed FM-MBO algorithm helps for optimizing the count of CNN's convolutional neurons to further improve the performance accuracy. At the end, the enhanced outcomes of the adopted diagnostic scheme are validated via a valuable comparative examination in terms of significant performance measures.
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Affiliation(s)
- S Shafiulla Basha
- Y.S.R. Engineering College of Yogi Vemana University, Korrapadu Road, Proddatur, Andhra Pradesh 516360, India
| | - K Venkata Ramanaiah
- Y.S.R. Engineering College of Yogi Vemana University, Korrapadu Road, Proddatur, Andhra Pradesh 516360, India
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V D, JeyaLakshmi V, Latha P, Raman R, V K, Raman S, R JS. Relationship of fractal analysis in retinal microvascularity with demographic and diagnostic parameters. Microvasc Res 2022; 139:104237. [PMID: 34481844 DOI: 10.1016/j.mvr.2021.104237] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2020] [Revised: 08/01/2021] [Accepted: 08/28/2021] [Indexed: 11/19/2022]
Abstract
Problems and diseases with eye are common in diabetic patients. Early diagnosis and detection of various diseases like retinopathy, neuropathy and nephropathy is crucial in diabetic patients. Certain demographic and diagnostic parameters play a significant role in predicting diseases related to diabetes. Development of a novel diagnostic method which helps to predict the disease by establishing a significant correlation with the demographic and diagnostic parameters is of prime importance. This study proposes a new methodology in which retinal fractals are obtained for the images and the derived retinal fractals are analysed to aid in disease prediction. This study comprises of images from patients with retinopathy, non retinopathy, neuropathy, nephropathy and hypertension. The proposed research is carried out in two aspects: 1) to correlate the retinal fractals of retinopathy and non retinopathy images with certain demographic and diagnostic parameters and interpret its significance, and 2) to exhibit a relationship between the retinal fractals and various diseases/addictive habit to facilitate the prediction of the disease/addictive habit. Hausdorff fractal dimension (HFD) was applied and higher fractal dimension was obtained for healthy cases. Then using Statistical Package for the Social Sciences (SPSS) various statistical parameters and significance were calculated to analyse the relationship. Analysis results showed that fractal value helped in distinguishing between the retinopathy and non retinopathy conditions. It also helped in diagnosing the presence and absence of hypertension. Correlation analysis between certain demographic parameters and fractal value showed a positive correlation whereas few exhibited negative correlation.
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Affiliation(s)
| | | | - P Latha
- Government College of Engineering, Tirunelveli, India
| | - Rajiv Raman
- Sankara Nethralaya Medical Research Foundation, Chennai, India
| | - Kiruthika V
- Hindustan Institute of Technology and Science, Padur, Kanchipuram, India
| | | | - Janani Surya R
- Sankara Nethralaya Medical Research Foundation, Chennai, India
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Iwata Y, Thanh HT, Sun G, Ishibashi K. High Accuracy Heartbeat Detection from CW-Doppler Radar Using Singular Value Decomposition and Matched Filter. SENSORS 2021; 21:s21113588. [PMID: 34064145 PMCID: PMC8196719 DOI: 10.3390/s21113588] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Revised: 05/04/2021] [Accepted: 05/18/2021] [Indexed: 11/22/2022]
Abstract
Heart rate measurement using a continuous wave Doppler radar sensor (CW-DRS) has been applied to cases where non-contact detection is required, such as the monitoring of vital signs in home healthcare. However, as a CW-DRS measures the speed of movement of the chest surface, which comprises cardiac and respiratory signals by body motion, extracting cardiac information from the superimposed signal is difficult. Therefore, it is challenging to extract cardiac information from superimposed signals. Herein, we propose a novel method based on a matched filter to solve this problem. The method comprises two processes: adaptive generation of a template via singular value decomposition of a trajectory matrix formed from the measurement signals, and reconstruction by convolution of the generated template and measurement signals. The method is validated using a dataset obtained in two different experiments, i.e., experiments involving supine and seated subject postures. Absolute errors in heart rate and standard deviation of heartbeat interval with references were calculated as 1.93±1.76bpm and 57.0±28.1s for the lying posture, and 9.72±7.86bpm and 81.3±24.3s for the sitting posture.
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Affiliation(s)
- Yuki Iwata
- Graduate School of Informatics and Engineering, The University of Electro-Communications (UEC), Tokyo 182-8585, Japan; (G.S.); (K.I.)
- Correspondence:
| | - Han Trong Thanh
- School of Electronics and Telecommunications, Hanoi University of Science and Technology (HUST), Hanoi 100000, Vietnam;
| | - Guanghao Sun
- Graduate School of Informatics and Engineering, The University of Electro-Communications (UEC), Tokyo 182-8585, Japan; (G.S.); (K.I.)
| | - Koichiro Ishibashi
- Graduate School of Informatics and Engineering, The University of Electro-Communications (UEC), Tokyo 182-8585, Japan; (G.S.); (K.I.)
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Nath MK, Dandapat S, Barna C. Automatic detection of blood vessels and evaluation of retinal disorder from color fundus images. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2020. [DOI: 10.3233/jifs-179687] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Randive SN, Senapati RK, Rahulkar AD. A review on computer-aided recent developments for automatic detection of diabetic retinopathy. J Med Eng Technol 2019; 43:87-99. [PMID: 31198073 DOI: 10.1080/03091902.2019.1576790] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Diabetic retinopathy is a serious microvascular disorder that might result in loss of vision and blindness. It seriously damages the retinal blood vessels and reduces the light-sensitive inner layer of the eye. Due to the manual inspection of retinal fundus images on diabetic retinopathy to detect the morphological abnormalities in Microaneurysms (MAs), Exudates (EXs), Haemorrhages (HMs), and Inter retinal microvascular abnormalities (IRMA) is very difficult and time consuming process. In order to avoid this, the regular follow-up screening process, and early automatic Diabetic Retinopathy detection are necessary. This paper discusses various methods of analysing automatic retinopathy detection and classification of different grading based on the severity levels. In addition, retinal blood vessel detection techniques are also discussed for the ultimate detection and diagnostic procedure of proliferative diabetic retinopathy. Furthermore, the paper elaborately discussed the systematic review accessed by authors on various publicly available databases collected from different medical sources. In the survey, meta-analysis of several methods for diabetic feature extraction, segmentation and various types of classifiers have been used to evaluate the system performance metrics for the diagnosis of DR. This survey will be helpful for the technical persons and researchers who want to focus on enhancing the diagnosis of a system that would be more powerful in real life.
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Affiliation(s)
- Santosh Nagnath Randive
- a Department of Electronics & Communication Engineering , Koneru Lakshmaiah Education Foundation, Green Fields, Vaddeswaram , Guntur , Andhra Pradesh , India
| | - Ranjan K Senapati
- a Department of Electronics & Communication Engineering , Koneru Lakshmaiah Education Foundation, Green Fields, Vaddeswaram , Guntur , Andhra Pradesh , India
| | - Amol D Rahulkar
- b Department of Electrical and Electronics Engineering , National Institute of Technology , Goa , India
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8
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Girard F, Kavalec C, Cheriet F. Joint segmentation and classification of retinal arteries/veins from fundus images. Artif Intell Med 2019; 94:96-109. [DOI: 10.1016/j.artmed.2019.02.004] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2017] [Revised: 08/09/2018] [Accepted: 02/17/2019] [Indexed: 11/17/2022]
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Retinal Blood Vessel Segmentation by Using Matched Filtering and Fuzzy C-means Clustering with Integrated Level Set Method for Diabetic Retinopathy Assessment. J Med Biol Eng 2018. [DOI: 10.1007/s40846-018-0454-2] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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10
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Khan KB, Khaliq AA, Jalil A, Iftikhar MA, Ullah N, Aziz MW, Ullah K, Shahid M. A review of retinal blood vessels extraction techniques: challenges, taxonomy, and future trends. Pattern Anal Appl 2018. [DOI: 10.1007/s10044-018-0754-8] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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11
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Automatic computer vision-based detection and quantitative analysis of indicative parameters for grading of diabetic retinopathy. Neural Comput Appl 2018. [DOI: 10.1007/s00521-018-3443-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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12
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Huang H, Ma H, JW van Triest H, Wei Y, Qian W. Automatic detection of neovascularization in retinal images using extreme learning machine. Neurocomputing 2018. [DOI: 10.1016/j.neucom.2017.03.093] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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13
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Kalaie S, Gooya A. Vascular tree tracking and bifurcation points detection in retinal images using a hierarchical probabilistic model. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2017; 151:139-149. [PMID: 28946995 DOI: 10.1016/j.cmpb.2017.08.018] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2016] [Revised: 07/27/2017] [Accepted: 08/21/2017] [Indexed: 06/07/2023]
Abstract
BACKGROUND AND OBJECTIVE Retinal vascular tree extraction plays an important role in computer-aided diagnosis and surgical operations. Junction point detection and classification provide useful information about the structure of the vascular network, facilitating objective analysis of retinal diseases. METHODS In this study, we present a new machine learning algorithm for joint classification and tracking of retinal blood vessels. Our method is based on a hierarchical probabilistic framework, where the local intensity cross sections are classified as either junction or vessel points. Gaussian basis functions are used for intensity interpolation, and the corresponding linear coefficients are assumed to be samples from class-specific Gamma distributions. Hence, a directed Probabilistic Graphical Model (PGM) is proposed and the hyperparameters are estimated using a Maximum Likelihood (ML) solution based on Laplace approximation. RESULTS The performance of proposed method is evaluated using precision and recall rates on the REVIEW database. Our experiments show the proposed approach reaches promising results in bifurcation point detection and classification, achieving 88.67% precision and 88.67% recall rates. CONCLUSIONS This technique results in a classifier with high precision and recall when comparing it with Xu's method.
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Affiliation(s)
- Soodeh Kalaie
- Department of Electrical and Computer Engineering, Tarbiat Modares University, Tehran, Iran.
| | - Ali Gooya
- Department of Electronic and Electrical Engineering, University of Sheffield, Sheffield, UK
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15
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Mansour RF. Evolutionary Computing Enriched Computer-Aided Diagnosis System for Diabetic Retinopathy: A Survey. IEEE Rev Biomed Eng 2017; 10:334-349. [PMID: 28534786 DOI: 10.1109/rbme.2017.2705064] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Complications caused due to diabetes mellitus result in significant microvasculature that eventually causes diabetic retinopathy (DR) that keeps on increasing with time, and eventually causes complete vision loss. Identifying subtle variations in morphological changes in retinal blood vessels, optic disk, exudates, microaneurysms, hemorrhage, etc., is complicated and requires a robust computer-aided diagnosis (CAD) system so as to enable earlier and efficient DR diagnosis practices. In the majority of the existing CAD systems, functional enhancements have been realized time and again to ensure accurate and efficient diagnosis of DR. In this survey paper, a number of existing literature presenting DR CAD systems are discussed and analyzed. Both traditional and varoius evolutionary approaches, including genetic algorithm, particle swarm optimization, ant colony optimization, bee colony optimization, etc., based DR CAD have also been studied and their respective efficiencies have been discussed. Our survey revealed that evolutionary computing methods can play a vital role for optimizing DR-CAD functional components, such as proprocessing by enhancing filters coefficient, segmentation by enriching clustering, feature extraction, feature selection, and dimensional reduction, as well as classification.
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16
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Kaur J, Mittal D. A generalized method for the detection of vascular structure in pathological retinal images. Biocybern Biomed Eng 2017. [DOI: 10.1016/j.bbe.2016.09.002] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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17
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Christodoulidis A, Hurtut T, Tahar HB, Cheriet F. A multi-scale tensor voting approach for small retinal vessel segmentation in high resolution fundus images. Comput Med Imaging Graph 2016; 52:28-43. [DOI: 10.1016/j.compmedimag.2016.06.001] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2015] [Revised: 04/16/2016] [Accepted: 06/01/2016] [Indexed: 11/29/2022]
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18
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Jaya T, Dheeba J, Singh NA. Detection of Hard Exudates in Colour Fundus Images Using Fuzzy Support Vector Machine-Based Expert System. J Digit Imaging 2016; 28:761-8. [PMID: 25822397 DOI: 10.1007/s10278-015-9793-5] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Diabetic retinopathy is a major cause of vision loss in diabetic patients. Currently, there is a need for making decisions using intelligent computer algorithms when screening a large volume of data. This paper presents an expert decision-making system designed using a fuzzy support vector machine (FSVM) classifier to detect hard exudates in fundus images. The optic discs in the colour fundus images are segmented to avoid false alarms using morphological operations and based on circular Hough transform. To discriminate between the exudates and the non-exudates pixels, colour and texture features are extracted from the images. These features are given as input to the FSVM classifier. The classifier analysed 200 retinal images collected from diabetic retinopathy screening programmes. The tests made on the retinal images show that the proposed detection system has better discriminating power than the conventional support vector machine. With the best combination of FSVM and features sets, the area under the receiver operating characteristic curve reached 0.9606, which corresponds to a sensitivity of 94.1% with a specificity of 90.0%. The results suggest that detecting hard exudates using FSVM contribute to computer-assisted detection of diabetic retinopathy and as a decision support system for ophthalmologists.
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Affiliation(s)
- T Jaya
- Department of Electronics and Communication Engineering, CSI Institute of Technology, Nagercoil, India.
| | - J Dheeba
- Department of Computer Science and Engineering, Noorul Islam Centre for Higher Education, Thuckalay, India, 629180.
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Gupta G, Kulasekaran S, Ram K, Joshi N, Sivaprakasam M, Gandhi R. Local characterization of neovascularization and identification of proliferative diabetic retinopathy in retinal fundus images. Comput Med Imaging Graph 2016; 55:124-132. [PMID: 27634547 DOI: 10.1016/j.compmedimag.2016.08.005] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2015] [Revised: 07/10/2016] [Accepted: 08/10/2016] [Indexed: 10/21/2022]
Abstract
Neovascularization (NV) is a characteristic of the onset of sight-threatening stage of DR, called proliferative DR (PDR). Identification of PDR requires modeling of these unregulated ill-formed vessels, and other associated signs of PDR. We present an approach that models the micro-pattern of local variations (using texture based analysis) and quantifies structural changes in vessel patterns in localized patches, to arrive at a score of neovascularity. The distribution of patch-level confidence scores is collated into an image-level decision of presence or absence of PDR. Evaluated on a dataset of 779 images combining public data and clinical data from local hospitals, the patch-level neovascularity prediction has a sensitivity of 92.4% at 92.6% specificity. For image-level PDR identification our method is shown to achieve sensitivity of 83.3% at a high specificity operating point of 96.1% specificity, and specificity of 83% at high sensitivity operating point of 92.2% sensitivity. Our approach could have potential application in DR grading where it can localize NVE regions and identify PDR images for immediate intervention.
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Affiliation(s)
- Garima Gupta
- Department of Electrical Engineering, IIT Madras, India.
| | - S Kulasekaran
- Healthcare Technology Innovation Centre, IIT Madras, India
| | - Keerthi Ram
- Healthcare Technology Innovation Centre, IIT Madras, India.
| | - Niranjan Joshi
- Healthcare Technology Innovation Centre, IIT Madras, India.
| | - Mohanasankar Sivaprakasam
- Department of Electrical Engineering, IIT Madras, India; Healthcare Technology Innovation Centre, IIT Madras, India.
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BahadarKhan K, A Khaliq A, Shahid M. A Morphological Hessian Based Approach for Retinal Blood Vessels Segmentation and Denoising Using Region Based Otsu Thresholding. PLoS One 2016; 11:e0158996. [PMID: 27441646 PMCID: PMC4956315 DOI: 10.1371/journal.pone.0158996] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2015] [Accepted: 06/24/2016] [Indexed: 11/18/2022] Open
Abstract
Diabetic Retinopathy (DR) harm retinal blood vessels in the eye causing visual deficiency. The appearance and structure of blood vessels in retinal images play an essential part in the diagnoses of an eye sicknesses. We proposed a less computational unsupervised automated technique with promising results for detection of retinal vasculature by using morphological hessian based approach and region based Otsu thresholding. Contrast Limited Adaptive Histogram Equalization (CLAHE) and morphological filters have been used for enhancement and to remove low frequency noise or geometrical objects, respectively. The hessian matrix and eigenvalues approach used has been in a modified form at two different scales to extract wide and thin vessel enhanced images separately. Otsu thresholding has been further applied in a novel way to classify vessel and non-vessel pixels from both enhanced images. Finally, postprocessing steps has been used to eliminate the unwanted region/segment, non-vessel pixels, disease abnormalities and noise, to obtain a final segmented image. The proposed technique has been analyzed on the openly accessible DRIVE (Digital Retinal Images for Vessel Extraction) and STARE (STructured Analysis of the REtina) databases along with the ground truth data that has been precisely marked by the experts.
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Affiliation(s)
- Khan BahadarKhan
- Department of Electronic Engineering, International Islamic University, Islamabad, Pakistan
- * E-mail:
| | - Amir A Khaliq
- Department of Electronic Engineering, International Islamic University, Islamabad, Pakistan
| | - Muhammad Shahid
- Department of Computer Engineering, CUST, Islamabad, Pakistan
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21
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Lázár I, Hajdu A. Segmentation of retinal vessels by means of directional response vector similarity and region growing. Comput Biol Med 2015; 66:209-21. [PMID: 26432200 DOI: 10.1016/j.compbiomed.2015.09.008] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2015] [Revised: 09/08/2015] [Accepted: 09/09/2015] [Indexed: 10/23/2022]
Abstract
This paper presents a novel retinal vessel segmentation method. Opposed to the general approach in similar directional methods, where only the maximal or summed responses of a pixel are used, here, the directional responses of a pixel are considered as a vector. The segmentation method is a unique region growing procedure which combines a hysteresis thresholding scheme with the response vector similarity of adjacent pixels. A vessel score map is constructed as the combination of the statistical measures of the response vectors and its local maxima to provide the seeds for the region growing procedure. A nearest neighbor classifier based on a rotation invariant response vector similarity measure is used to filter the seed points. Many techniques in the literature that capture the Gaussian-like cross-section of vessels suffer from the drawback of giving false high responses to the steep intensity transitions at the boundary of the optic disc and bright lesions. To overcome this issue, we also propose a symmetry constrained multiscale matched filtering technique. The proposed vessel segmentation method has been tested on three publicly available image sets, where its performance proved to be competitive with the state-of-the-art and comparable to the accuracy of a human observer, as well.
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Affiliation(s)
- István Lázár
- Faculty of Informatics, University of Debrecen, 4010 Debrecen, Hungary.
| | - András Hajdu
- Faculty of Informatics, University of Debrecen, 4010 Debrecen, Hungary.
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Gupta G, Kulasekaran S, Ram K, Joshi N, Sivaprakasam M, Gandhi R. Computer-assisted identification of proliferative diabetic retinopathy in color retinal images. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2015; 2015:5642-5645. [PMID: 26737572 DOI: 10.1109/embc.2015.7319672] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Advanced (proliferative) stage of diabetic retinopathy (DR) is indicated by the growth of thin, fragile and highly unregulated vessels, neovascularization (NV). In order to identify proliferative diabetic retinopathy (PDR), our approach models the micro-pattern of local variations using texture based analysis and quantifies the structural changes in vessel patterns in localized patches, to map them to the confidence score of being neovascular using supervised learning framework. Rule-based criteria on patch-level neovascularity scores in an image is used for the decision of absence or presence of PDR. Evaluated using 3 datasets, our method achieves 96% sensitivity and 92.6% specificity for localizing NV. Image-level identification of PDR achieves high sensitivity of 96.72% at 79.6% specificity and high specificity of 96.50% at 73.22% sensitivity. Our approach could have potential application in DR grading where it can localize NVE regions and identify PDR images for immediate intervention.
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Welikala RA, Fraz MM, Dehmeshki J, Hoppe A, Tah V, Mann S, Williamson TH, Barman SA. Genetic algorithm based feature selection combined with dual classification for the automated detection of proliferative diabetic retinopathy. Comput Med Imaging Graph 2015; 43:64-77. [PMID: 25841182 DOI: 10.1016/j.compmedimag.2015.03.003] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2014] [Revised: 03/03/2015] [Accepted: 03/11/2015] [Indexed: 11/28/2022]
Abstract
Proliferative diabetic retinopathy (PDR) is a condition that carries a high risk of severe visual impairment. The hallmark of PDR is the growth of abnormal new vessels. In this paper, an automated method for the detection of new vessels from retinal images is presented. This method is based on a dual classification approach. Two vessel segmentation approaches are applied to create two separate binary vessel map which each hold vital information. Local morphology features are measured from each binary vessel map to produce two separate 4-D feature vectors. Independent classification is performed for each feature vector using a support vector machine (SVM) classifier. The system then combines these individual outcomes to produce a final decision. This is followed by the creation of additional features to generate 21-D feature vectors, which feed into a genetic algorithm based feature selection approach with the objective of finding feature subsets that improve the performance of the classification. Sensitivity and specificity results using a dataset of 60 images are 0.9138 and 0.9600, respectively, on a per patch basis and 1.000 and 0.975, respectively, on a per image basis.
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Affiliation(s)
- R A Welikala
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom.
| | - M M Fraz
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom.
| | - J Dehmeshki
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom.
| | - A Hoppe
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom.
| | - V Tah
- Medical Retina, Oxford Eye Hospital, Oxford, United Kingdom.
| | - S Mann
- Ophthalmology Department, St Thomas' Hospital, London, United Kingdom.
| | - T H Williamson
- Ophthalmology Department, St Thomas' Hospital, London, United Kingdom.
| | - S A Barman
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom.
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Zhang J, Li H, Nie Q, Cheng L. A retinal vessel boundary tracking method based on Bayesian theory and multi-scale line detection. Comput Med Imaging Graph 2014; 38:517-25. [DOI: 10.1016/j.compmedimag.2014.05.010] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2014] [Revised: 05/20/2014] [Accepted: 05/22/2014] [Indexed: 10/25/2022]
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25
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Ganjee R, Azmi R, Gholizadeh B. An Improved Retinal Vessel Segmentation Method Based on High Level Features for Pathological Images. J Med Syst 2014; 38:108. [DOI: 10.1007/s10916-014-0108-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2014] [Accepted: 07/07/2014] [Indexed: 11/28/2022]
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26
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Welikala RA, Dehmeshki J, Hoppe A, Tah V, Mann S, Williamson TH, Barman SA. Automated detection of proliferative diabetic retinopathy using a modified line operator and dual classification. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2014; 114:247-261. [PMID: 24636803 DOI: 10.1016/j.cmpb.2014.02.010] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2013] [Revised: 01/14/2014] [Accepted: 02/14/2014] [Indexed: 06/03/2023]
Abstract
Proliferative diabetic retinopathy (PDR) is a condition that carries a high risk of severe visual impairment. The hallmark of PDR is neovascularisation, the growth of abnormal new vessels. This paper describes an automated method for the detection of new vessels in retinal images. Two vessel segmentation approaches are applied, using the standard line operator and a novel modified line operator. The latter is designed to reduce false responses to non-vessel edges. Both generated binary vessel maps hold vital information which must be processed separately. This is achieved with a dual classification system. Local morphology features are measured from each binary vessel map to produce two separate feature sets. Independent classification is performed for each feature set using a support vector machine (SVM) classifier. The system then combines these individual classification outcomes to produce a final decision. Sensitivity and specificity results using a dataset of 60 images are 0.862 and 0.944 respectively on a per patch basis and 1.00 and 0.90 respectively on a per image basis.
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Affiliation(s)
- R A Welikala
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom.
| | - J Dehmeshki
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom
| | - A Hoppe
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom
| | - V Tah
- Medical Retina, Oxford Eye Hospital, Oxford, United Kingdom
| | - S Mann
- Ophthalmology Department, St. Thomas' Hospital, London, United Kingdom
| | - T H Williamson
- Ophthalmology Department, St. Thomas' Hospital, London, United Kingdom
| | - S A Barman
- Digital Imaging Research Centre, Faculty of Science, Engineering and Computing, Kingston University, London, United Kingdom
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27
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Mookiah MRK, Acharya UR, Chua CK, Lim CM, Ng EYK, Laude A. Computer-aided diagnosis of diabetic retinopathy: a review. Comput Biol Med 2013; 43:2136-55. [PMID: 24290931 DOI: 10.1016/j.compbiomed.2013.10.007] [Citation(s) in RCA: 168] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2013] [Revised: 09/27/2013] [Accepted: 10/04/2013] [Indexed: 11/29/2022]
Abstract
Diabetes mellitus may cause alterations in the retinal microvasculature leading to diabetic retinopathy. Unchecked, advanced diabetic retinopathy may lead to blindness. It can be tedious and time consuming to decipher subtle morphological changes in optic disk, microaneurysms, hemorrhage, blood vessels, macula, and exudates through manual inspection of fundus images. A computer aided diagnosis system can significantly reduce the burden on the ophthalmologists and may alleviate the inter and intra observer variability. This review discusses the available methods of various retinal feature extractions and automated analysis.
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28
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Abstract
Diabetic retinopathy has become an increasingly important cause of blindness. Nevertheless, vision loss can be prevented from early detection of diabetic retinopathy and monitor with regular examination. Common automatic detection of retinal abnormalities is for microaneurysms, hemorrhages, hard exudates, and cotton wool spot. However, there is a worse case of retinal abnormality, but not much research was done to detect it. It is neovascularization where new blood vessels grow due to extensive lack of oxygen in the retinal capillaries. This paper shows that various combination of techniques such as image normalization, compactness classifier, morphology-based operator, Gaussian filtering, and thresholding techniques were used in developing of neovascularization detection. A function matrix box was added in order to classify the neovascularization from natural blood vessel. A region-based neovascularization classification was attempted as a diagnostic accuracy. The developed method was tested on images from different database sources with varying quality and image resolution. It shows that specificity and sensitivity results were 89.4% and 63.9%, respectively. The proposed approach yield encouraging results for future development.
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29
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Kaiqiong Sun, Zhen Chen, Shaofeng Jiang. Local Morphology Fitting Active Contour for Automatic Vascular Segmentation. IEEE Trans Biomed Eng 2012; 59:464-73. [DOI: 10.1109/tbme.2011.2174362] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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30
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Fujita H, You J, Li Q, Arimura H, Tanaka R, Sanada S, Niki N, Lee G, Hara T, Fukuoka D, Muramatsu C, Katafuchi T, Iinuma G, Miyake M, Arai Y, Moriyama N. State-of-the-Art of Computer-Aided Detection/Diagnosis (CAD). LECTURE NOTES IN COMPUTER SCIENCE 2010. [DOI: 10.1007/978-3-642-13923-9_32] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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