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Naskar S, Sharma S, Kuotsu K, Halder S, Pal G, Saha S, Mondal S, Biswas UK, Jana M, Bhattacharjee S. The biomedical applications of artificial intelligence: an overview of decades of research. J Drug Target 2025; 33:717-748. [PMID: 39744873 DOI: 10.1080/1061186x.2024.2448711] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2024] [Revised: 12/13/2024] [Accepted: 12/26/2024] [Indexed: 01/11/2025]
Abstract
A significant area of computer science called artificial intelligence (AI) is successfully applied to the analysis of intricate biological data and the extraction of substantial associations from datasets for a variety of biomedical uses. AI has attracted significant interest in biomedical research due to its features: (i) better patient care through early diagnosis and detection; (ii) enhanced workflow; (iii) lowering medical errors; (v) lowering medical costs; (vi) reducing morbidity and mortality; (vii) enhancing performance; (viii) enhancing precision; and (ix) time efficiency. Quantitative metrics are crucial for evaluating AI implementations, providing insights, enabling informed decisions, and measuring the impact of AI-driven initiatives, thereby enhancing transparency, accountability, and overall impact. The implementation of AI in biomedical fields faces challenges such as ethical and privacy concerns, lack of awareness, technology unreliability, and professional liability. A brief discussion is given of the AI techniques, which include Virtual screening (VS), DL, ML, Hidden Markov models (HMMs), Neural networks (NNs), Generative models (GMs), Molecular dynamics (MD), and Structure-activity relationship (SAR) models. The study explores the application of AI in biomedical fields, highlighting its enhanced predictive accuracy, treatment efficacy, diagnostic efficiency, faster decision-making, personalised treatment strategies, and precise medical interventions.
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Affiliation(s)
- Sweet Naskar
- Department of Pharmaceutics, Institute of Pharmacy, Kalyani, West Bengal, India
| | - Suraj Sharma
- Department of Pharmaceutics, Sikkim Professional College of Pharmaceutical Sciences, Sikkim, India
| | - Ketousetuo Kuotsu
- Department of Pharmaceutical Technology, Jadavpur University, Kolkata, West Bengal, India
| | - Suman Halder
- Medical Department, Department of Indian Railway, Kharagpur Division, Kharagpur, West Bengal, India
| | - Goutam Pal
- Service Dispensary, ESI Hospital, Hoogly, West Bengal, India
| | - Subhankar Saha
- Department of Pharmaceutical Technology, Jadavpur University, Kolkata, West Bengal, India
| | - Shubhadeep Mondal
- Department of Pharmacology, Momtaz Begum Pharmacy College, Rajarhat, West Bengal, India
| | - Ujjwal Kumar Biswas
- School of Pharmaceutical Science (SPS), Siksha O Anusandhan (SOA) University, Bhubaneswar, Odisha, India
| | - Mayukh Jana
- School of Pharmacy, Centurion University of Technology and Management, Centurion University, Bhubaneswar, Odisha, India
| | - Sunirmal Bhattacharjee
- Department of Pharmaceutics, Bharat Pharmaceutical Technology, Amtali, Agartala, Tripura, India
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2
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Liu XY, Wang WL, Liu M, Chen MY, Pereira T, Doda DY, Ke YF, Wang SY, Wen D, Tong XG, Li WG, Yang Y, Han XD, Sun YL, Song X, Hao CY, Zhang ZH, Liu XY, Li CY, Peng R, Song XX, Yasi A, Pang MJ, Zhang K, He RN, Wu L, Chen SG, Chen WJ, Chao YG, Hu CG, Zhang H, Zhou M, Wang K, Liu PF, Chen C, Geng XY, Qin Y, Gao DR, Song EM, Cheng LL, Chen X, Ming D. Recent applications of EEG-based brain-computer-interface in the medical field. Mil Med Res 2025; 12:14. [PMID: 40128831 PMCID: PMC11931852 DOI: 10.1186/s40779-025-00598-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/23/2024] [Accepted: 02/21/2025] [Indexed: 03/26/2025] Open
Abstract
Brain-computer interfaces (BCIs) represent an emerging technology that facilitates direct communication between the brain and external devices. In recent years, numerous review articles have explored various aspects of BCIs, including their fundamental principles, technical advancements, and applications in specific domains. However, these reviews often focus on signal processing, hardware development, or limited applications such as motor rehabilitation or communication. This paper aims to offer a comprehensive review of recent electroencephalogram (EEG)-based BCI applications in the medical field across 8 critical areas, encompassing rehabilitation, daily communication, epilepsy, cerebral resuscitation, sleep, neurodegenerative diseases, anesthesiology, and emotion recognition. Moreover, the current challenges and future trends of BCIs were also discussed, including personal privacy and ethical concerns, network security vulnerabilities, safety issues, and biocompatibility.
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Affiliation(s)
- Xiu-Yun Liu
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
- Haihe Laboratory of Brain-Computer Interaction and Human-Machine Integration, Tianjin, 300380, China
- School of Pharmaceutical Science and Technology, Tianjin University, Tianjin, 300072, China
| | - Wen-Long Wang
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Miao Liu
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Ming-Yi Chen
- Department of Micro/Nano Electronics, Shanghai Jiaotong University, Shanghai, 200240, China
| | - Tânia Pereira
- Institute for Systems and Computer Engineering, Technology and Science, 4099-002, Porto, Portugal
| | - Desta Yakob Doda
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Yu-Feng Ke
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Shou-Yan Wang
- Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai, 200433, China
| | - Dong Wen
- School of Intelligence Science and Technology, University of Sciences and Technology Beijing, Beijing, 100083, China
| | | | - Wei-Guang Li
- The State Key Laboratory of Brain and Cognitive Sciences, The University of Hong Kong, Hong Kong SAR, 999077, China
- State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-Di Herbs, Artemisinin Research Center, and Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China
| | - Yi Yang
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, 100070, China
- China National Clinical Research Center for Neurological Diseases, Beijing, 100070, China
- Medical Research Council Brain Network Dynamics Unit, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, OX1 3TH, UK
| | - Xiao-Di Han
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, 100070, China
| | - Yu-Lin Sun
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Xin Song
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Cong-Ying Hao
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Zi-Hua Zhang
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Xin-Yang Liu
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Chun-Yang Li
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Rui Peng
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Xiao-Xin Song
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Abi Yasi
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Mei-Jun Pang
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Kuo Zhang
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Run-Nan He
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Le Wu
- Department of Electric Engineering and Information Science, University of Science and Technology of China, Hefei, 230026, China
| | - Shu-Geng Chen
- Department of Rehabilitation, Huashan Hospital, Fudan University, Shanghai, 200040, China
| | - Wen-Jin Chen
- Xuanwu Hospital of Capital Medical University, Beijing, 100053, China
| | - Yan-Gong Chao
- The First Hospital of Tsinghua University, Beijing, 100016, China
| | - Cheng-Gong Hu
- Department of Critical Care Medicine, West China Hospital of Sichuan University, Chengdu, 610041, China
| | - Heng Zhang
- Department of Neurosurgery, The First Hospital of China Medical University, Beijing, 110122, China
| | - Min Zhou
- Department of Critical Care Medicine, Division of Life Sciences and Medicine, The First Affiliated Hospital of University of Science and Technology of China, University of Science and Technology of China, Hefei, 230031, China
| | - Kun Wang
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Peng-Fei Liu
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China
| | - Chen Chen
- School of Computer Science, Fudan University, Shanghai, 200438, China
| | - Xin-Yi Geng
- School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, China
| | - Yun Qin
- School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, China
| | - Dong-Rui Gao
- School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, China
| | - En-Ming Song
- Shanghai Frontiers Science Research Base of Intelligent Optoelectronics and Perception, Institute of Optoelectronics, Fudan University, Shanghai, 200433, China
| | - Long-Long Cheng
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China.
| | - Xun Chen
- Department of Electric Engineering and Information Science, University of Science and Technology of China, Hefei, 230026, China.
| | - Dong Ming
- State Key Laboratory of Advanced Medical Materials and Devices, Medical School, Tianjin University, Tianjin, 300072, China.
- Haihe Laboratory of Brain-Computer Interaction and Human-Machine Integration, Tianjin, 300380, China.
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Higashi H. Single-channel electroencephalography decomposition by detector-atom network and its pre-trained model. J Neurosci Methods 2025; 414:110323. [PMID: 39586380 DOI: 10.1016/j.jneumeth.2024.110323] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2024] [Revised: 11/13/2024] [Accepted: 11/17/2024] [Indexed: 11/27/2024]
Abstract
Signal decomposition techniques utilizing multi-channel spatial features are critical for analyzing, denoising, and classifying electroencephalography (EEG) signals. To facilitate the decomposition of signals recorded with limited channels, this paper presents a novel single-channel decomposition approach that does not rely on multi-channel features. Our model posits that an EEG signal comprises short, shift-invariant waves, referred to as atoms. We design a decomposer as an artificial neural network aimed at estimating these atoms and detecting their time shifts and amplitude modulations within the input signal. The efficacy of our method was validated across various scenarios in brain-computer interfaces and neuroscience, demonstrating enhanced performance. Additionally, cross-dataset validation indicates the feasibility of a pre-trained model, enabling a plug-and-play signal decomposition module.
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Affiliation(s)
- Hiroshi Higashi
- Graduate School of Engineering, Osaka University, Suita, Osaka, Japan.
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Agrawal R, Dhule C, Shukla G, Singh S, Agrawal U, Alsubaie N, Alqahtani MS, Abbas M, Soufiene BO. Design of EEG based thought identification system using EMD & deep neural network. Sci Rep 2024; 14:26621. [PMID: 39496663 PMCID: PMC11535384 DOI: 10.1038/s41598-024-64961-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 06/14/2024] [Indexed: 11/06/2024] Open
Abstract
Biological communication system for neurological disorder patients is similar to the Brain Computer Interface in a way that it facilitates the connection to the outside world in real time. The interdisciplinary field of Electroencephalogram based message depiction is gaining importance as it assists the paralysed person to communicate. In the proposed method a novel approach of feature extraction is done by Empirical Mode Decomposition on non- stationary & non-linear kind of EEG signal. EMD helps in the effective time frequency analysis by disintegrating the EEG signal in the form of six Intrinsic Mode Functions with help of the frequency components. In all nine features are extracted from the decomposed IMFs so as to predict the states or messages of the patient. The above computed features are then served to the Deep Neural Network to perform the classification. The performance of suggested method is studied through applying it to the acquired database generated by the designed hardware as well as also in real time message depiction. The maximum classification accuracy 97% for the acquired database & 85% in real time are obtained respectively by comparative analysis. The command messages generated from the proposed system helps the person suffering from neurological disorder to establish the communication link with the outside world in an efficient way. Thus, the proposed novel method shows better performance in real time message depiction purpose as related to other existing methods.
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Affiliation(s)
- Rahul Agrawal
- Department of Data Science, IoT, Cybersecurity (DIC), G H Raisoni College of Engineering, Nagpur, Maharashtra, India
| | - Chetan Dhule
- Department of Data Science, IoT, Cybersecurity (DIC), G H Raisoni College of Engineering, Nagpur, Maharashtra, India
| | - Garima Shukla
- Department of Computer Science Engineering, Amity School of Engineering & Technology, Amity University, Maharashtra, India
| | - Sofia Singh
- Department of AI, Amity School of Engineering & Technology, Amity University, Noida, India
| | - Urvashi Agrawal
- Department of Electronics & Telecommunication Engineering, Jhulelal Institute of Technology, Nagpur, India
| | - Najah Alsubaie
- Department of Computer Sciences, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, P.O. Box 84428, 11671, Riyadh, Saudi Arabia
| | - Mohammed S Alqahtani
- Radiological Sciences Department, College of Applied Medical Sciences, King Khalid University, 61421, Abha, Saudi Arabia
- Space Research Centre, BioImaging Unit, University of Leicester, Michael Atiyah Building, Leicester, LE1 7RH, UK
| | - Mohamed Abbas
- Electrical Engineering Department, College of Engineering, King Khalid University, 61421, Abha, Saudi Arabia
| | - Ben Othman Soufiene
- PRINCE Laboratory Research, ISITcom, Hammam Sousse, University of Sousse, Sousse, Tunisia.
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5
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Djemili R, Djemili I. Nonlinear and chaos features over EMD/VMD decomposition methods for ictal EEG signals detection. Comput Methods Biomech Biomed Engin 2024; 27:2091-2110. [PMID: 37861376 DOI: 10.1080/10255842.2023.2271603] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 08/30/2023] [Accepted: 10/08/2023] [Indexed: 10/21/2023]
Abstract
The detection and identification of epileptic seizures attracted considerable relevance for the neurophysiologists. In order to accomplish the detection of epileptic seizures or equivalently ictal EEG states, this paper proposes the use of nonlinear and chaos features not computed over the raw EEG signals as it was commonly experienced, but instead over intrinsic mode functions (IMFs) extracted subsequently to the application of newly time-frequency signal decomposition methods on the basis of empirical mode decomposition (EMD) and variational mode decomposition (VMD) methods. The first step within the proposed methodology is to excerpt the various components of the IMFs by EMD and VMD decomposition methods on time EEG segments. The Hjorth parameters, the Hurst exponent, the Recurrence Quantification Analysis (RQA), the detrended fluctuation analysis (DFA), the Largest Lyapunov Exponent (LLE), The Higuchi and Katz fractal dimensions (HFD and KFD), seven nonlinear and chaos features computed over the IMFs were investigated and their classification performances evaluated using the k-nearest neighbor (KNN) and the multilayer perceptron neural network (MLPNN) classifiers. Furthermore, the combination of the best nonlinear features has also been examined in terms of sensitivity, specificity and overall classification accuracy. The publicly available Bonn EEG dataset has been has been employed to validate the efficiency of the proposed method for detecting ictal EEG signals from normal or interictal EEG segments. Among the several experiments involved in the current study, the ultimate results establish that the overall classification accuracy can achieve 100%, 99.45%, 99.8%, 99.8%, 98.6% and 99.1% for six different epileptic seizure detection case problems studied, confirming the ability of the proposed methodology in helping the clinic practitioners in the epilepsy detection care units to classify seizure events with a great confidence.
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Affiliation(s)
| | - Ilyes Djemili
- Lab. Electrotech, Université 20 Août, Skikda, Algeria
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6
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Wang J, Gao R, Zheng H, Zhu H, Shi CJR. SSGCNet: A Sparse Spectra Graph Convolutional Network for Epileptic EEG Signal Classification. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2024; 35:12157-12171. [PMID: 37030729 DOI: 10.1109/tnnls.2023.3252569] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
In this article, we propose a sparse spectra graph convolutional network (SSGCNet) for epileptic electroencephalogram (EEG) signal classification. The goal is to develop a lightweighted deep learning model while retaining a high level of classification accuracy. To do so, we propose a weighted neighborhood field graph (WNFG) to represent EEG signals. The WNFG reduces redundant edges between graph nodes and has lower graph generation time and memory usage than the baseline solution. The sequential graph convolutional network is further developed from a WNFG by combining sparse weight pruning and the alternating direction method of multipliers (ADMM). Compared with the state-of-the-art method, our method has the same classification accuracy on the Bonn public dataset and the spikes and slow waves (SSW) clinical real dataset when the connection rate is ten times smaller.
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Nie J, Shu H, Wu F. An epilepsy classification based on FFT and fully convolutional neural network nested LSTM. Front Neurosci 2024; 18:1436619. [PMID: 39139499 PMCID: PMC11319253 DOI: 10.3389/fnins.2024.1436619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2024] [Accepted: 07/16/2024] [Indexed: 08/15/2024] Open
Abstract
Background and objective Epilepsy, which is associated with neuronal damage and functional decline, typically presents patients with numerous challenges in their daily lives. An early diagnosis plays a crucial role in managing the condition and alleviating the patients' suffering. Electroencephalogram (EEG)-based approaches are commonly employed for diagnosing epilepsy due to their effectiveness and non-invasiveness. In this study, a classification method is proposed that use fast Fourier Transform (FFT) extraction in conjunction with convolutional neural networks (CNN) and long short-term memory (LSTM) models. Methods Most methods use traditional frameworks to classify epilepsy, we propose a new approach to this problem by extracting features from the source data and then feeding them into a network for training and recognition. It preprocesses the source data into training and validation data and then uses CNN and LSTM to classify the style of the data. Results Upon analyzing a public test dataset, the top-performing features in the fully CNN nested LSTM model for epilepsy classification are FFT features among three types of features. Notably, all conducted experiments yielded high accuracy rates, with values exceeding 96% for accuracy, 93% for sensitivity, and 96% for specificity. These results are further benchmarked against current methodologies, showcasing consistent and robust performance across all trials. Our approach consistently achieves an accuracy rate surpassing 97.00%, with values ranging from 97.95 to 99.83% in individual experiments. Particularly noteworthy is the superior accuracy of our method in the AB versus (vs.) CDE comparison, registering at 99.06%. Conclusion Our method exhibits precise classification abilities distinguishing between epileptic and non-epileptic individuals, irrespective of whether the participant's eyes are closed or open. Furthermore, our technique shows remarkable performance in effectively categorizing epilepsy type, distinguishing between epileptic ictal and interictal states versus non-epileptic conditions. An inherent advantage of our automated classification approach is its capability to disregard EEG data acquired during states of eye closure or eye-opening. Such innovation holds promise for real-world applications, potentially aiding medical professionals in diagnosing epilepsy more efficiently.
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Affiliation(s)
| | - Huazhong Shu
- Laboratory of Image Science and Technology, Key Laboratory of Computer Network and Information Integration, Ministry of Education, Southeast University, Nanjing, China
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8
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Dong Y, Tang X, Li Q, Wang Y, Jiang N, Tian L, Zheng Y, Li X, Zhao S, Li G, Fang P. An Approach for EEG Denoising Based on Wasserstein Generative Adversarial Network. IEEE Trans Neural Syst Rehabil Eng 2023; 31:3524-3534. [PMID: 37643110 DOI: 10.1109/tnsre.2023.3309815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/31/2023]
Abstract
Electroencephalogram (EEG) recordings often contain artifacts that would lower signal quality. Many efforts have been made to eliminate or at least minimize the artifacts, and most of them rely on visual inspection and manual operations, which is time/labor-consuming, subjective, and incompatible to filter massive EEG data in real-time. In this paper, we proposed a deep learning framework named Artifact Removal Wasserstein Generative Adversarial Network (AR-WGAN), where the well-trained model can decompose input EEG, detect and delete artifacts, and then reconstruct denoised signals within a short time. The proposed approach was systematically compared with commonly used denoising methods including Denoised AutoEncoder, Wiener Filter, and Empirical Mode Decomposition, with both public and self-collected datasets. The experimental results proved the promising performance of AR-WGAN on automatic artifact removal for massive data across subjects, with correlation coefficient up to 0.726±0.033, and temporal and spatial relative root-mean-square error as low as 0.176±0.046 and 0.761±0.046, respectively. This work may demonstrate the proposed AR-WGAN as a high-performance end-to-end method for EEG denoising, with many on-line applications in clinical EEG monitoring and brain-computer interfaces.
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Rukhsar S, Tiwari AK. Barnes–Hut approximation based accelerating t-SNE for seizure detection. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104833] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/19/2023]
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10
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Dianat B, La Torraca P, Manfredi A, Cassone G, Vacchi C, Sebastiani M, Pancaldi F. Classification of pulmonary sounds through deep learning for the diagnosis of interstitial lung diseases secondary to connective tissue diseases. Comput Biol Med 2023; 160:106928. [PMID: 37156223 DOI: 10.1016/j.compbiomed.2023.106928] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Revised: 01/17/2023] [Accepted: 04/13/2023] [Indexed: 05/10/2023]
Abstract
Early diagnosis of interstitial lung diseases secondary to connective tissue diseases is critical for the treatment and survival of patients. The symptoms, like dry cough and dyspnea, appear late in the clinical history and are not specific, moreover, the current approach to confirm the diagnosis of interstitial lung disease is based on high resolution computer tomography. However, computer tomography involves x-ray exposure for patients and high costs for the Health System, therefore preventing its use for a massive screening campaign in elder people. In this work we investigate the use of deep learning techniques for the classification of pulmonary sounds acquired from patients affected by connective tissue diseases. The novelty of the work consists of a suitably developed pre-processing pipeline for de-noising and data augmentation. The proposed approach is combined with a clinical study where the ground truth is represented by high resolution computer tomography. Various convolutional neural networks have provided an overall accuracy as high as 91% in the classification of lung sounds and have led to an overwhelming diagnostic accuracy in the range 91%-93%. Modern high performance hardware for edge computing can easily support our algorithms. This solution paves the way for a vast screening campaign of interstitial lung diseases in elder people on the basis of a non-invasive and cheap thoracic auscultation.
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Affiliation(s)
- Behnood Dianat
- University of Modena and Reggio Emilia, Department of Sciences and Methods for Engineering, Via G. Amendola 2, 42122 Reggio Emilia, Italy; University of Modena and Reggio Emilia, Artificial Intelligence Research and Innovation Center (AIRI), Via Pietro Vivarelli 10, 41125 Modena, Italy
| | - Paolo La Torraca
- University of Modena and Reggio Emilia, Department of Sciences and Methods for Engineering, Via G. Amendola 2, 42122 Reggio Emilia, Italy
| | - Andreina Manfredi
- University of Modena and Reggio Emilia, Department of Surgery, Medicine, Dentistry and Morphological Sciences with Transplant Surgery, Oncology and Regenerative Medicine Relevance, via del Pozzo 71, 41124, Modena, Italy; Azienda Policlinico di Modena, Rheumatology Unit, via del Pozzo 71, 41124, Modena, Italy
| | - Giulia Cassone
- University of Modena and Reggio Emilia, Department of Surgery, Medicine, Dentistry and Morphological Sciences with Transplant Surgery, Oncology and Regenerative Medicine Relevance, via del Pozzo 71, 41124, Modena, Italy; Azienda Policlinico di Modena, Rheumatology Unit, via del Pozzo 71, 41124, Modena, Italy
| | - Caterina Vacchi
- University of Modena and Reggio Emilia, Department of Surgery, Medicine, Dentistry and Morphological Sciences with Transplant Surgery, Oncology and Regenerative Medicine Relevance, via del Pozzo 71, 41124, Modena, Italy; Azienda Policlinico di Modena, Rheumatology Unit, via del Pozzo 71, 41124, Modena, Italy
| | - Marco Sebastiani
- University of Modena and Reggio Emilia, Department of Surgery, Medicine, Dentistry and Morphological Sciences with Transplant Surgery, Oncology and Regenerative Medicine Relevance, via del Pozzo 71, 41124, Modena, Italy; Azienda Policlinico di Modena, Rheumatology Unit, via del Pozzo 71, 41124, Modena, Italy
| | - Fabrizio Pancaldi
- University of Modena and Reggio Emilia, Department of Sciences and Methods for Engineering, Via G. Amendola 2, 42122 Reggio Emilia, Italy; University of Modena and Reggio Emilia, Artificial Intelligence Research and Innovation Center (AIRI), Via Pietro Vivarelli 10, 41125 Modena, Italy.
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Guhan Seshadri N, Agrawal S, Kumar Singh B, Geethanjali B, Mahesh V, Pachori RB. EEG based classification of children with learning disabilities using shallow and deep neural network. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2022.104553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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12
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Gu L, Jiang J, Han H, Gan JQ, Wang H. Recognition of unilateral lower limb movement based on EEG signals with ERP-PCA analysis. Neurosci Lett 2023; 800:137133. [PMID: 36801241 DOI: 10.1016/j.neulet.2023.137133] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2022] [Revised: 01/30/2023] [Accepted: 02/13/2023] [Indexed: 02/17/2023]
Abstract
It has been confirmed that motor imagery (MI) and motor execution (ME) share a subset of mechanisms underlying motor cognition. In contrast to the well-studied laterality of upper limb movement, the laterality hypothesis of lower limb movement also exists, but it needs to be characterized by further investigation. This study used electroencephalographic (EEG) recordings of 27 subjects to compare the effects of bilateral lower limb movement in the MI and ME paradigms. Event-related potential (ERP) recorded was decomposed into meaningful and useful representatives of the electrophysiological components, such as N100 and P300. Principal components analysis (PCA) was used to trace the characteristics of ERP components temporally and spatially, respectively. The hypothesis of this study is that the functional opposition of unilateral lower limbs of MI and ME should be reflected in the different alterations of the spatial distribution of lateralized activity. Meanwhile, the significant ERP-PCA components of the EEG signals as identifiable feature sets were applied with support vector machine to identify left and right lower limb movement tasks. The average classification accuracy over all subjects is up to 61.85% for MI and 62.94% for ME. The proportion of subjects with significant results are 51.85% for MI and 59.26% for ME, respectively. Therefore, a potential new classification model for lower limb movement can be applied on brain computer interface (BCI) systems in the future.
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Affiliation(s)
- Lingyun Gu
- Key Laboratory of Child Development and Learning Science of Ministry of Education, School of Biological Science & Medical Engineering, Southeast University, Nanjing 210096, Jiangsu, PR China
| | - Jiuchuan Jiang
- School of Information Engineering, Nanjing University of Finance and Economics, Nanjing 210003, Jiangsu, PR China
| | - Hongfang Han
- Key Laboratory of Child Development and Learning Science of Ministry of Education, School of Biological Science & Medical Engineering, Southeast University, Nanjing 210096, Jiangsu, PR China
| | - John Q Gan
- School of Computer Science and Electronic Engineering, University of Essex, Colchester CO4 3SQ, UK
| | - Haixian Wang
- Key Laboratory of Child Development and Learning Science of Ministry of Education, School of Biological Science & Medical Engineering, Southeast University, Nanjing 210096, Jiangsu, PR China.
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13
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EEG Signals to Digit Classification Using Deep Learning-Based One-Dimensional Convolutional Neural Network. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2022. [DOI: 10.1007/s13369-022-07313-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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14
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EEG analysis and classification based on cardinal spline empirical mode decomposition and synchrony features. Med Biol Eng Comput 2022; 60:2359-2372. [DOI: 10.1007/s11517-022-02615-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2021] [Accepted: 06/15/2022] [Indexed: 10/17/2022]
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15
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Nour M, Kandaz D, Ucar MK, Polat K, Alhudhaif A. Machine Learning and Electrocardiography Signal-Based Minimum Calculation Time Detection for Blood Pressure Detection. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2022; 2022:5714454. [PMID: 35903432 PMCID: PMC9325348 DOI: 10.1155/2022/5714454] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Revised: 06/21/2022] [Accepted: 06/28/2022] [Indexed: 11/18/2022]
Abstract
Objective Measurement and monitoring of blood pressure are of great importance for preventing diseases such as cardiovascular and stroke caused by hypertension. Therefore, there is a need for advanced artificial intelligence-based systolic and diastolic blood pressure systems with a new technological infrastructure with a noninvasive process. The study is aimed at determining the minimum ECG time required for calculating systolic and diastolic blood pressure based on the Electrocardiography (ECG) signal. Methodology. The study includes ECG recordings of five individuals taken from the IEEE database, measured during daily activity. For the study, each signal was divided into epochs of 2-4-6-8-10-12-14-16-18-20 seconds. Twenty-five features were extracted from each epoched signal. The dimension of the dataset was reduced by using Spearman's feature selection algorithm. Analysis based on metrics was carried out by applying machine learning algorithms to the obtained dataset. Gaussian process regression exponential (GPR) machine learning algorithm was preferred because it is easy to integrate into embedded systems. Results The MAPE estimation performance values for diastolic and systolic blood pressure values for 16-second epochs were 2.44 mmHg and 1.92 mmHg, respectively. Conclusion According to the study results, it is evaluated that systolic and diastolic blood pressure values can be calculated with a high-performance ratio with 16-second ECG signals.
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Affiliation(s)
- Majid Nour
- Department of Electrical and Computer Engineering, Faculty of Engineering, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Derya Kandaz
- Electrical-Electronics Engineering, Faculty of Engineering, Sakarya University, 54187 Sakarya, Turkey
| | - Muhammed Kursad Ucar
- Electrical-Electronics Engineering, Faculty of Engineering, Sakarya University, 54187 Sakarya, Turkey
| | - Kemal Polat
- Department of Electrical and Electronics Engineering, Faculty of Engineering, Bolu Abant Izzet Baysal University, Bolu 14280, Turkey
| | - Adi Alhudhaif
- Department of Computer Science, College of Computer Engineering and Sciences in Al-Kharj, Prince Sattam Bin Abdulaziz University, P.O. Box 151, Al-Kharj 11942, Saudi Arabia
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16
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Classification of EEG Signals for Prediction of Epileptic Seizures. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12147251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Epilepsy is a common brain disorder that causes patients to face multiple seizures in a single day. Around 65 million people are affected by epilepsy worldwide. Patients with focal epilepsy can be treated with surgery, whereas generalized epileptic seizures can be managed with medications. It has been noted that in more than 30% of cases, these medications fail to control epileptic seizures, resulting in accidents and limiting the patient’s life. Predicting epileptic seizures in such patients prior to the commencement of an oncoming seizure is critical so that the seizure can be treated with preventive medicines before it occurs. Electroencephalogram (EEG) signals of patients recorded to observe brain electrical activity during a seizure can be quite helpful in predicting seizures. Researchers have proposed methods that use machine and/or deep learning techniques to predict epileptic seizures using scalp EEG signals; however, prediction of seizures with increased accuracy is still a challenge. Therefore, we propose a three-step approach. It includes preprocessing of scalp EEG signals with PREP pipeline, which is a more sophisticated alternative to basic notch filtering. This method uses a regression-based technique to further enhance the SNR, with a combination of handcrafted, i.e., statistical features such as temporal mean, variance, and skewness, and automated features using CNN, followed by classification of interictal state and preictal state segments using LSTM to predict seizures. We train and validate our proposed technique on the CHB-MIT scalp EEG dataset and achieve accuracy of 94%, sensitivity of 93.8%, and 91.2% specificity. The proposed technique achieves better sensitivity and specificity than existing methods.
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17
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Kuo PC, Kuo PC, Liou M. Decision thresholding on fMRI activation maps using the Hilbert-Huang transform. J Neural Eng 2022; 19. [PMID: 35797976 DOI: 10.1088/1741-2552/ac7f5e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 07/07/2022] [Indexed: 11/12/2022]
Abstract
OBJECTIVE Functional magnetic resonance imaging (fMRI) requires thresholds by which to identify brain regions with significant activation, particularly for experiments involving real-life paradigms. One conventional non-parametric approach to generating surrogate data involves decomposition of the original fMRI time series using the Fourier transform, after which the phase is randomized without altering the magnitude of individual frequency components. However, it has been reported that spontaneous brain signals could be non-stationary, which, if true, could lead to false-positive results. APPROACH This paper introduces a randomization procedure based on the Hilbert-Huang transform by which to account for non-stationarity in fMRI time series derived from two fMRI datasets (stationary or non-stationary). The significance of individual voxels was determined by comparing the distribution of empirical data versus a surrogate distribution. MAIN RESULTS In a comparison with conventional phase-randomization and wavelet-based permutation methods, the proposed method proved highly effective in generating activation maps indicating essential brain regions, while filtering out noise in the white matter. SIGNIFICANCE This work demonstrated the importance of considering the non-stationary nature of fMRI time series when selecting resampling methods by which to probe brain activity or identify functional networks in real-life fMRI experiments. We propose a statistical testing method to deal with the non-stationarity of continuous brain signals.
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Affiliation(s)
- Po-Chih Kuo
- , National Chiao-Tung University, Hsinchu, TAIWAN
| | - Po-Chih Kuo
- Department of Computer Science, National Tsing Hua University, No. 101 KungFu Rd. Sec. 2, Hsinchu, 02140, TAIWAN
| | - Michelle Liou
- Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei, Taipei, 11529, TAIWAN
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18
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Kaushik G, Gaur P, Sharma RR, Pachori RB. EEG signal based seizure detection focused on Hjorth parameters from tunable-Q wavelet sub-bands. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103645] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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19
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Khan NA, Ali S, Choi K. Modified Time-Frequency Marginal Features for Detection of Seizures in Newborns. SENSORS 2022; 22:s22083036. [PMID: 35459022 PMCID: PMC9025536 DOI: 10.3390/s22083036] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 04/06/2022] [Accepted: 04/11/2022] [Indexed: 02/01/2023]
Abstract
The timely detection of seizure activity in the case of newborns can help save lives. Clinical signs of seizures in newborns are difficult to observe, so, in this study, we propose an automated method of detecting seizures in newborns using multi-channel electroencephalogram (EEG) recording acquired from 36 newborns admitted to Royal Women's Hospital, Brisbane, Australia. A novel set of time-frequency marginal features are defined to detect seizure activity in newborns. The proposed set is based on the observation that EEG seizure signals appear either as a train of spikes or as a summation of frequency-modulated chirps with slow variation in the instantaneous frequency curve. The proposed set of features is obtained by extracting the time-frequency (TF) signature of seizure spikes and frequency-modulated chirps by exploiting the direction of ridges in the TF plane. Based on extracted TF signature of spikes, the modified time-marginal is computed whereas based on the extracted TF signature of frequency-modulated chirps, the modified frequency-marginal is computed. It is demonstrated that features extracted from the modified time-domain marginal and frequency-domain marginal in combination with TF statistical and frequency-related features lead to better accuracy than the existing TF signal classification method, i.e., the proposed method achieves an F1 score of 70.93% which is 5% greater than the existing method.
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Affiliation(s)
- Nabeel Ali Khan
- Faculty of Engineering & IT, Foundation University Islamabad, Islamabad 46000, Pakistan;
| | - Sadiq Ali
- Department of Electrical Engineering, University of Engineering and Technology, Peshawar 25000, Pakistan;
| | - Kwonhue Choi
- Department of Information and Communicaiton, Yeungnam University, Gyeongsan 38541, Korea
- Correspondence:
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20
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Machine-learning-enabled adaptive signal decomposition for a brain-computer interface using EEG. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103526] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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21
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Yan X, Yang D, Lin Z, Vucetic B. Significant Low-dimensional Spectral-temporal Features for Seizure Detection. IEEE Trans Neural Syst Rehabil Eng 2022; 30:668-677. [PMID: 35245199 DOI: 10.1109/tnsre.2022.3156931] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Absence seizure as a generalized onset seizure, simultaneously spreading seizure to both sides of the brain, involves around ten-second sudden lapses of consciousness. It common occurs in children than adults, which affects living quality even threats lives. Absence seizure can be confused with inattentive attention-deficit hyperactivity disorder since both have similar symptoms, such as inattention and daze. Therefore, it is necessary to detect absence seizure onset. However, seizure onset detection in electroencephalography (EEG) signals is a challenging task due to the non-stereotyped seizure activities as well as their stochastic and non-stationary characteristics in nature. Joint spectral-temporal features are believed to contain sufficient and powerful feature information for absence seizure detection. However, the resulting high-dimensional features involve redundant information and require heavy computational load. Here, we discover significant low-dimensional spectral-temporal features in terms of mean-standard deviation of wavelet transform coefficient (MS-WTC), based on which a novel absence seizure detection framework is developed. The EEG signals are transformed into the spectral-temporal domain, with their low-dimensional features fed into a convolutional neural network. Superior detection performance is achieved on the widely-used benchmark dataset as well as a clinical dataset from the Chinese 301 Hospital. For the former, seven classification tasks were evaluated with the accuracy from 99.8% to 100.0%, while for the latter, the method achieved a mean accuracy of 94.7%, overwhelming other methods with low-dimensional temporal and spectral features. Experimental results on two seizure datasets demonstrate reliability, efficiency and stability of our proposed MS-WTC method, validating the significance of the extracted low-dimensional spectral-temporal features.
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22
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Rout SK, Sahani M, Dora C, Biswal PK, Biswal B. An efficient epileptic seizure classification system using empirical wavelet transform and multi-fuse reduced deep convolutional neural network with digital implementation. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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23
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Chen J, Li H, Ma L, Soong F. DEEMD-SPP: A Novel Framework for Emotion Recognition Based on EEG Signals. Front Psychiatry 2022; 13:885120. [PMID: 35573327 PMCID: PMC9091650 DOI: 10.3389/fpsyt.2022.885120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 04/01/2022] [Indexed: 11/13/2022] Open
Abstract
Electroencephalography (EEG) is one of the most widely-used biosignal capturing technology for investigating brain activities, cognitive diseases, and affective disorders. To understand the underlying principles of brain activities and affective disorders using EEG data, one of the fundamental tasks is to accurately identify emotions from EEG signals, which has attracted huge attention in the field of affective computing. To improve the accuracy and effectiveness of emotion recognition based on EEG data, previous studies have successfully developed numerous feature extraction methods and classifiers. Among them, ensemble empirical mode decomposition (EEMD) is an efficient signal decomposition technique for extracting EEG features. It can alleviate the mode-mixing problem by adding white noise to the source signal. However, there remain some issues when applying this method to recognition tasks. As the added noise cannot be filtered completely, spurious modes are generated due to the residual noise. Therefore, it is crucial to perform intrinsic mode function (IMF) selection to find the most valuable IMF components that represent brain activities. Furthermore, the number of decomposed IMFs is various to different original signals, thus how to unify feature dimensions needs better solutions. To solve these issues, we propose a novel forecasting framework, named DEEMD-SPP, to identify emotions from EEG signals, based on the combination of denoising ensemble empirical mode decomposition (DEEMD) and Spatial Pyramid Pooling Network (SPP-Net). First, DEEMD is proposed to decompose the EEG signals, which effectively eliminates residual noise in the IMFs and selects the most valuable IMFs. Second, time-domain and frequency-domain features are extracted from the selected IMFs. Finally, SPP-net is employed as the classifier to recognize emotions, which can effectively transform various-sized feature maps into fixed-sized feature vectors through the pyramid pooling layer. The experimental results demonstrate that our proposed DEEMD-SPP framework can effectively reduce the effect of spike-in white noise, accurately extract EEG features, and significantly improve the performance of emotion recognition.
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Affiliation(s)
- Jing Chen
- School of Computer Science and Technology, Faculty of Computing, Harbin Institute of Technology, Harbin, China
| | - Haifeng Li
- School of Computer Science and Technology, Faculty of Computing, Harbin Institute of Technology, Harbin, China
| | - Lin Ma
- School of Computer Science and Technology, Faculty of Computing, Harbin Institute of Technology, Harbin, China
| | - Frank Soong
- School of Computer Science and Technology, Faculty of Computing, Harbin Institute of Technology, Harbin, China.,Speech Group, Microsoft Research Asia, Beijing, China
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24
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An age-dependent Connectivity-based computer aided diagnosis system for Autism Spectrum Disorder using Resting-state fMRI. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103108] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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25
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Chang L, Wang R, Zhang Y. Decoding SSVEP patterns from EEG via multivariate variational mode decomposition-informed canonical correlation analysis. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103209] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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26
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Machine Learning-Based Epileptic Seizure Detection Methods Using Wavelet and EMD-Based Decomposition Techniques: A Review. SENSORS 2021; 21:s21248485. [PMID: 34960577 PMCID: PMC8703715 DOI: 10.3390/s21248485] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Revised: 12/13/2021] [Accepted: 12/14/2021] [Indexed: 11/25/2022]
Abstract
Epileptic seizures are temporary episodes of convulsions, where approximately 70 percent of the diagnosed population can successfully manage their condition with proper medication and lead a normal life. Over 50 million people worldwide are affected by some form of epileptic seizures, and their accurate detection can help millions in the proper management of this condition. Increasing research in machine learning has made a great impact on biomedical signal processing and especially in electroencephalogram (EEG) data analysis. The availability of various feature extraction techniques and classification methods makes it difficult to choose the most suitable combination for resource-efficient and correct detection. This paper intends to review the relevant studies of wavelet and empirical mode decomposition-based feature extraction techniques used for seizure detection in epileptic EEG data. The articles were chosen for review based on their Journal Citation Report, feature selection methods, and classifiers used. The high-dimensional EEG data falls under the category of ‘3N’ biosignals—nonstationary, nonlinear, and noisy; hence, two popular classifiers, namely random forest and support vector machine, were taken for review, as they are capable of handling high-dimensional data and have a low risk of over-fitting. The main metrics used are sensitivity, specificity, and accuracy; hence, some papers reviewed were excluded due to insufficient metrics. To evaluate the overall performances of the reviewed papers, a simple mean value of all metrics was used. This review indicates that the system that used a Stockwell transform wavelet variant as a feature extractor and SVM classifiers led to a potentially better result.
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Eltrass AS, Tayel MB, EL-qady AF. Automatic epileptic seizure detection approach based on multi-stage Quantized Kernel Least Mean Square filters. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.103031] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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28
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Solving the SSVEP Paradigm Using the Nonlinear Canonical Correlation Analysis Approach. SENSORS 2021; 21:s21165308. [PMID: 34450750 PMCID: PMC8439358 DOI: 10.3390/s21165308] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 07/31/2021] [Accepted: 08/01/2021] [Indexed: 01/16/2023]
Abstract
This paper presents the implementation of nonlinear canonical correlation analysis (NLCCA) approach to detect steady-state visual evoked potentials (SSVEP) quickly. The need for the fast recognition of proper stimulus to help end an SSVEP task in a BCI system is justified due to the flickering external stimulus exposure that causes users to start to feel fatigued. Measuring the accuracy and exposure time can be carried out through the information transfer rate-ITR, which is defined as a relationship between the precision, the number of stimuli, and the required time to obtain a result. NLCCA performance was evaluated by comparing it with two other approaches-the well-known canonical correlation analysis (CCA) and the least absolute reduction and selection operator (LASSO), both commonly used to solve the SSVEP paradigm. First, the best average ITR value was found from a dataset comprising ten healthy users with an average age of 28, where an exposure time of one second was obtained. In addition, the time sliding window responses were observed immediately after and around 200 ms after the flickering exposure to obtain the phase effects through the coefficient of variation (CV), where NLCCA obtained the lowest value. Finally, in order to obtain statistical significance to demonstrate that all approaches differ, the accuracy and ITR from the time sliding window responses was compared using a statistical analysis of variance per approach to identify differences between them using Tukey's test.
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29
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Juan CH, Nguyen KT, Liang WK, Quinn AJ, Chen YH, Muggleton NG, Yeh JR, Woolrich MW, Nobre AC, Huang NE. Revealing the Dynamic Nature of Amplitude Modulated Neural Entrainment With Holo-Hilbert Spectral Analysis. Front Neurosci 2021; 15:673369. [PMID: 34421511 PMCID: PMC8375503 DOI: 10.3389/fnins.2021.673369] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Accepted: 07/14/2021] [Indexed: 12/11/2022] Open
Abstract
Patterns in external sensory stimuli can rapidly entrain neuronally generated oscillations observed in electrophysiological data. Here, we manipulated the temporal dynamics of visual stimuli with cross-frequency coupling (CFC) characteristics to generate steady-state visual evoked potentials (SSVEPs). Although CFC plays a pivotal role in neural communication, some cases reporting CFC may be false positives due to non-sinusoidal oscillations that can generate artificially inflated coupling values. Additionally, temporal characteristics of dynamic and non-linear neural oscillations cannot be fully derived with conventional Fourier-based analyses mainly due to trade off of temporal resolution for frequency precision. In an attempt to resolve these limitations of linear analytical methods, Holo-Hilbert Spectral Analysis (HHSA) was investigated as a potential approach for examination of non-linear and non-stationary CFC dynamics in this study. Results from both simulation and SSVEPs demonstrated that temporal dynamic and non-linear CFC features can be revealed with HHSA. Specifically, the results of simulation showed that the HHSA is less affected by the non-sinusoidal oscillation and showed possible cross frequency interactions embedded in the simulation without any a priori assumptions. In the SSVEPs, we found that the time-varying cross-frequency interaction and the bidirectional coupling between delta and alpha/beta bands can be observed using HHSA, confirming dynamic physiological signatures of neural entrainment related to cross-frequency coupling. These findings not only validate the efficacy of the HHSA in revealing the natural characteristics of signals, but also shed new light on further applications in analysis of brain electrophysiological data with the aim of understanding the functional roles of neuronal oscillation in various cognitive functions.
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Affiliation(s)
- Chi-Hung Juan
- Institute of Cognitive Neuroscience, National Central University, Taoyuan City, Taiwan
- Cognitive Intelligence and Precision Healthcare Center, National Central University, Taoyuan City, Taiwan
- Department of Psychology, Kaohsiung Medical University, Kaohsiung City, Taiwan
| | - Kien Trong Nguyen
- Institute of Cognitive Neuroscience, National Central University, Taoyuan City, Taiwan
- Faculty of Electronics Engineering, Posts and Telecommunications Institute of Technology, Ho Chi Minh City, Vietnam
| | - Wei-Kuang Liang
- Institute of Cognitive Neuroscience, National Central University, Taoyuan City, Taiwan
- Cognitive Intelligence and Precision Healthcare Center, National Central University, Taoyuan City, Taiwan
| | - Andrew J. Quinn
- Oxford Centre for Human Brain Activity, University of Oxford, Oxford, United Kingdom
- Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, United Kingdom
| | - Yen-Hsun Chen
- Institute of Cognitive Neuroscience, National Central University, Taoyuan City, Taiwan
| | - Neil G. Muggleton
- Institute of Cognitive Neuroscience, National Central University, Taoyuan City, Taiwan
- Cognitive Intelligence and Precision Healthcare Center, National Central University, Taoyuan City, Taiwan
- Department of Psychology, Goldsmiths, University of London, London, United Kingdom
- Institute of Cognitive Neuroscience, University College London, London, United Kingdom
| | - Jia-Rong Yeh
- Cognitive Intelligence and Precision Healthcare Center, National Central University, Taoyuan City, Taiwan
| | - Mark W. Woolrich
- Oxford Centre for Human Brain Activity, University of Oxford, Oxford, United Kingdom
- Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, United Kingdom
| | - Anna C. Nobre
- Oxford Centre for Human Brain Activity, University of Oxford, Oxford, United Kingdom
- Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, United Kingdom
- Department of Experimental Psychology, University of Oxford, Oxford, United Kingdom
| | - Norden E. Huang
- Cognitive Intelligence and Precision Healthcare Center, National Central University, Taoyuan City, Taiwan
- Data Analysis and Application Laboratory, The First Institute of Oceanography, Qingdao, China
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30
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Transfer of semi-supervised broad learning system in electroencephalography signal classification. Neural Comput Appl 2021. [DOI: 10.1007/s00521-021-05793-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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31
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A novel time-varying modeling and signal processing approach for epileptic seizure detection and classification. Neural Comput Appl 2021. [DOI: 10.1007/s00521-020-05330-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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32
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Krishnaprasanna R, Vijaya Baskar V, Panneerselvam J. Automatic identification of epileptic seizures using volume of phase space representation. Phys Eng Sci Med 2021; 44:545-556. [PMID: 33956327 DOI: 10.1007/s13246-021-01006-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2020] [Accepted: 04/26/2021] [Indexed: 11/26/2022]
Abstract
Epilepsy is a neurological disorder that affects people of any age, which can be detected by Electroencephalogram (EEG) signals. This paper proposes a novel method called Volume of Phase Space Representation (VOPSR) to classify seizure and seizure-free EEG signals automatically. Primarily, the recorded EEG signal is disintegrated into several Intrinsic Mode Functions (IMFs) using the Empirical Mode Decomposition (EMD) method and the three-dimensional phase space have been reconstructed for the obtained IMFs. The volume is measured for the obtained 3D-PSR for different IMFs called VOPSR, which is used as a feature set for the classification of Epileptic seizure EEG signals. Support vector machine (SVM) is used as a classifier for the classification of epileptic and epileptic-free EEG signals. The classification performance of the proposed method is evaluated under different kernels such as Linear, Polynomial and Radial Basis Function (RBF) kernels. Finally, the proposed method outperforms noteworthy state-of-the-art classification methods in the context of epileptic EEG signals, achieving 99.13% accuracy (average) with the Linear, Polynomial, and RBF kernels. The proposed technique can be used to detect epilepsy from the EEG signals automatically without human intervention.
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Affiliation(s)
- R Krishnaprasanna
- Department of ECE, Sathyabama Institute of Science and Technology, Chennai, Tamil Nadu, 600119, India.
| | - V Vijaya Baskar
- School of EEE, Sathyabama Institute of Science and Technology, Chennai, Tamil Nadu, 600119, India
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Shi M, Wang C, Li XZ, Li MQ, Wang L, Xie NG. EEG signal classification based on SVM with improved squirrel search algorithm. BIOMED ENG-BIOMED TE 2021; 66:137-152. [PMID: 32990644 DOI: 10.1515/bmt-2020-0038] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2020] [Accepted: 07/30/2020] [Indexed: 11/15/2022]
Abstract
Electroencephalography (EEG) is a complex bioelectrical signal. Analysis of which can provide researchers with useful physiological information. In order to recognize and classify EEG signals, a pattern recognition method for optimizing the support vector machine (SVM) by using improved squirrel search algorithm (ISSA) is proposed. The EEG signal is preprocessed, with its time domain features being extracted and directed to the SVM as feature vectors for classification and identification. In this paper, the method of good point set is used to initialize the population position, chaos and reverse learning mechanism are introduced into the algorithm. The performance test of the improved squirrel algorithm (ISSA) is carried out by using the benchmark function. As can be seen from the statistical analysis of the results, the exploration ability and convergence speed of the algorithm are improved. This is then used to optimize SVM parameters. ISSA-SVM model is established and built for classification of EEG signals, compared with other common SVM parameter optimization models. For data sets, the average classification accuracy of this method is 85.9%. This result is an improvement of 2-5% over the comparison method.
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Affiliation(s)
- Miao Shi
- Department of Mechanical Engineering, Anhui University of Technology, Ma'anshan, Anhui, China
| | - Chao Wang
- Department of Mechanical Engineering, Anhui University of Technology, Ma'anshan, Anhui, China
| | - Xian-Zhe Li
- Department of Management Science and Engineering, Anhui University of Technology, Ma'anshan, Anhui, China
| | - Ming-Qiang Li
- Department of Electrical and Electronic Engineering, Imperial College, London, UK
| | - Lu Wang
- Department of Mechanical Engineering, Anhui University of Technology, Ma'anshan, Anhui, China
| | - Neng-Gang Xie
- Department of Management Science and Engineering, Anhui University of Technology, Ma'anshan, Anhui, China
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34
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Zheng X, Zhang M, Li T, Ji C, Hu B. A novel consciousness emotion recognition method using ERP components and MMSE. J Neural Eng 2021; 18. [PMID: 33636711 DOI: 10.1088/1741-2552/abea62] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 02/26/2021] [Indexed: 11/12/2022]
Abstract
Objective.Electroencephalogram (EEG) based emotion recognition mainly extracts traditional features from time domain and frequency domain, and the classification accuracy is often low for the complex nature of EEG signals. However, to the best of our knowledge, the fusion of event-related potential (ERP) components and traditional features is not employed in emotion recognition, and the ERP components are only identified and analyzed by the psychology professionals, which is time-consuming and laborious.Approach.In order to recognize the consciousness and unconsciousness emotions, we propose a novel consciousness emotion recognition method using ERP components and modified multi-scale sample entropy (MMSE). Firstly, ERP components such as N200, P300 and N300 are automatically identified and extracted based on shapelet technique. Secondly, variational mode decomposition and wavelet packet decomposition are utilized to process EEG signals for obtaining different levels of emotional variational mode function (VMF), namelyVMFβ+γ, and then nonlinear feature MMSE of eachVMFβ+γare extracted. At last, ERP components and nonlinear feature MMSE are fused to generate a new feature vector, which is fed into random forest to classify the consciousness and unconsciousness emotions.Main results.Experimental results demonstrate that the average classification accuracy of our proposed method reach 94.42%, 94.88%, and 94.95% for happiness, horror and anger, respectively.Significance.Our study indicates that the fusion of ERP components and nonlinear feature MMSE is more effective for the consciousness and unconsciousness emotions recognition, which provides a new research direction and method for the study of nonlinear time series.
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Affiliation(s)
- Xiangwei Zheng
- School of Information Science and Engineering, Shandong Normal University, Jinan, People's Republic of China.,Shandong Provincial Key Laboratory for Distributed Computer Software Novel Technology, Jinan, People's Republic of China
| | - Min Zhang
- School of Information Science and Engineering, Shandong Normal University, Jinan, People's Republic of China.,Shandong Provincial Key Laboratory for Distributed Computer Software Novel Technology, Jinan, People's Republic of China
| | - Tiantian Li
- Faculty of Education, Shandong Normal University, Jinan, People's Republic of China
| | - Cun Ji
- School of Information Science and Engineering, Shandong Normal University, Jinan, People's Republic of China.,Shandong Provincial Key Laboratory for Distributed Computer Software Novel Technology, Jinan, People's Republic of China
| | - Bin Hu
- School of Information Science and Engineering, Shandong Normal University, Jinan, People's Republic of China
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35
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Yadav VP, Sharma KK. Variational mode decomposition-based seizure classification using Bayesian regularized shallow neural network. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.02.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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36
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B. LP, S. J, Pragatheeswaran JK, D. S, N. P. Scattering convolutional network based predictive model for cognitive activity of brain using empirical wavelet decomposition. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102501] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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37
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Dong A, Li Z, Zheng Q. Transferred Subspace Learning Based on Non-negative Matrix Factorization for EEG Signal Classification. Front Neurosci 2021; 15:647393. [PMID: 33841089 PMCID: PMC8024531 DOI: 10.3389/fnins.2021.647393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2020] [Accepted: 02/22/2021] [Indexed: 11/13/2022] Open
Abstract
EEG signal classification has been a research hotspot recently. The combination of EEG signal classification with machine learning technology is very popular. Traditional machine leaning methods for EEG signal classification assume that the EEG signals are drawn from the same distribution. However, the assumption is not always satisfied with the practical applications. In practical applications, the training dataset and the testing dataset are from different but related domains. How to make best use of the training dataset knowledge to improve the testing dataset is critical for these circumstances. In this paper, a novel method combining the non-negative matrix factorization technology and the transfer learning (NMF-TL) is proposed for EEG signal classification. Specifically, the shared subspace is extracted from the testing dataset and training dataset using non-negative matrix factorization firstly and then the shared subspace and the original feature space are combined to obtain the final EEG signal classification results. On the one hand, the non-negative matrix factorization can assure to obtain essential information between the testing and the training dataset; on the other hand, the combination of shared subspace and the original feature space can fully use all the signals including the testing and the training dataset. Extensive experiments on Bonn EEG confirmed the effectiveness of the proposed method.
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Affiliation(s)
- Aimei Dong
- School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Science), Jinan, China
| | - Zhigang Li
- School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Science), Jinan, China
| | - Qiuyu Zheng
- School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Science), Jinan, China
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38
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Chaudhary P, Agrawal R. Sensory motor imagery EEG classification based on non-dyadic wavelets using dynamic weighted majority ensemble classification. INTELLIGENT DECISION TECHNOLOGIES 2021. [DOI: 10.3233/idt-200005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
The classification accuracy has become a significant challenge and an important task in sensory motor imagery (SMI) electroencephalogram (EEG) based Brain Computer interface (BCI) system. This paper compares ensemble classification framework with individual classifiers. The main objective is to reduce the inference of non-stationary and transient information and improves the classification decision in BCI system. The framework comprises the three phases as follows: (1) the EEG signal first decomposes into triadic frequency bands: low pass band, band pass filter and high pass filter to localize α, β and high γ frequency bands within the EEG signals, (2) Then, Common spatial pattern (CSP) algorithm has been applied on the extracted frequencies in phase I to heave out the important features of EEG signal, (3) Further, an existing Dynamic Weighted Majiority (DWM) ensemble classification algorithm has been implemented using features extracted in phase II, for final class label decision. J48, Naive Bayes, Support Vector Machine, and K-Nearest Neighbor classifiers used as base classifiers for making a diverse ensemble of classifiers. A comparative study between individual classifiers and ensemble framework has been included in the paper. Experimental evaluation and assessment of the performance of the proposed model is done on the publically available datasets: BCI Competition IV dataset IIa and BCI Competition III dataset IVa. The ensemble based learning method gave the highest accuracy among all. The average sensitivity, specificity, and accuracy of 85.4%, 86.5%, and 85.6% were achieved with a kappa value of 0.59 using DWM classification.
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39
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Ge W, Jing J, An S, Herlopian A, Ng M, Struck AF, Appavu B, Johnson EL, Osman G, Haider HA, Karakis I, Kim JA, Halford JJ, Dhakar MB, Sarkis RA, Swisher CB, Schmitt S, Lee JW, Tabaeizadeh M, Rodriguez A, Gaspard N, Gilmore E, Herman ST, Kaplan PW, Pathmanathan J, Hong S, Rosenthal ES, Zafar S, Sun J, Brandon Westover M. Deep active learning for Interictal Ictal Injury Continuum EEG patterns. J Neurosci Methods 2021; 351:108966. [PMID: 33131680 PMCID: PMC8135050 DOI: 10.1016/j.jneumeth.2020.108966] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2020] [Revised: 09/16/2020] [Accepted: 10/01/2020] [Indexed: 02/02/2023]
Abstract
OBJECTIVES Seizures and seizure-like electroencephalography (EEG) patterns, collectively referred to as "ictal interictal injury continuum" (IIIC) patterns, are commonly encountered in critically ill patients. Automated detection is important for patient care and to enable research. However, training accurate detectors requires a large labeled dataset. Active Learning (AL) may help select informative examples to label, but the optimal AL approach remains unclear. METHODS We assembled >200,000 h of EEG from 1,454 hospitalized patients. From these, we collected 9,808 labeled and 120,000 unlabeled 10-second EEG segments. Labels included 6 IIIC patterns. In each AL iteration, a Dense-Net Convolutional Neural Network (CNN) learned vector representations for EEG segments using available labels, which were used to create a 2D embedding map. Nearest-neighbor label spreading within the embedding map was used to create additional pseudo-labeled data. A second Dense-Net was trained using real- and pseudo-labels. We evaluated several strategies for selecting candidate points for experts to label next. Finally, we compared two methods for class balancing within queries: standard balanced-based querying (SBBQ), and high confidence spread-based balanced querying (HCSBBQ). RESULTS Our results show: 1) Label spreading increased convergence speed for AL. 2) All query criteria produced similar results to random sampling. 3) HCSBBQ query balancing performed best. Using label spreading and HCSBBQ query balancing, we were able to train models approaching expert-level performance across all pattern categories after obtaining ∼7000 expert labels. CONCLUSION Our results provide guidance regarding the use of AL to efficiently label large EEG datasets in critically ill patients.
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Affiliation(s)
- Wendong Ge
- Massachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States
| | - Jin Jing
- Massachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States
| | - Sungtae An
- Georgia Institute of Technology, College of Computing, Atlanta, GA, Georgia
| | | | | | - Aaron F Struck
- University of Wisconsin Madison Department of Neurology, United States
| | - Brian Appavu
- University of Arizona College of Medicine, Phoenix, United States
| | | | | | | | | | | | | | | | | | | | | | | | | | | | - Nicolas Gaspard
- Université Libre de Bruxelles, Hôpital Erasme and Yale University, Belgium
| | - Emily Gilmore
- Yale University, Yale New Haven Hospital, United States
| | - Susan T Herman
- Barrow Neurological Institute, Phoenix, AZ, United States
| | | | | | - Shenda Hong
- Georgia Institute of Technology, College of Computing, Atlanta, GA, Georgia
| | - Eric S Rosenthal
- Massachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States
| | - Sahar Zafar
- Massachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States
| | - Jimeng Sun
- University of Illinois at Urbana-Champaign, College of Computing, Champaign, IL, United States
| | - M Brandon Westover
- Massachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States.
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40
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Chowdhury TT, Fattah SA, Shahnaz C. Seizure activity classification based on bimodal Gaussian modeling of the gamma and theta band IMFs of EEG signals. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2020.102273] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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41
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Epilepsy seizure detection using kurtosis based VMD’s parameters selection and bandwidth features. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2020.102255] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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42
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Li C, Zhou W, Liu G, Zhang Y, Geng M, Liu Z, Wang S, Shang W. Seizure Onset Detection Using Empirical Mode Decomposition and Common Spatial Pattern. IEEE Trans Neural Syst Rehabil Eng 2021; 29:458-467. [PMID: 33507872 DOI: 10.1109/tnsre.2021.3055276] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Automatic seizure onset detection plays an important role in epilepsy diagnosis. In this paper, a novel seizure onset detection method is proposed by combining empirical mode decomposition (EMD) of long-term scalp electroencephalogram (EEG) with common spatial pattern (CSP). First, wavelet transform (WT) and EMD are employed on EEG recordings respectively for filtering pre-processing and time-frequency decomposition. Then CSP is applied to reduce the dimension of multi-channel time-frequency representation, and the variance is extracted as the only feature. Afterwards, a support vector machine (SVM) group consisting of ten SVMs is served as a robust classifier. Finally, the post-processing is adopted to acquire a higher recognition rate and reduce the false detection rate. The results obtained from CHB-MIT database of 977 h scalp EEG recordings reveal that the proposed system can achieve a segment-based sensitivity of 97.34% with a specificity of 97.50% and an event-based sensitivity of 98.47% with a false detection rate of 0.63/h. This proposed detection system was also validated on a clinical scalp EEG database from the Second Hospital of Shandong University, and the system yielded a sensitivity of 93.67% and a specificity of 96.06%. At the event-based level, a sensitivity of 99.39% and a false detection rate of 0.64/h were obtained. Furthermore, this work showed that the CSP spatial filter was helpful to identify EEG channels involved in seizure onsets. These satisfactory results indicate that the proposed system may provide a reference for seizure onset detection in clinical applications.
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43
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Fathima S, Kore SK. Formulation of the Challenges in Brain-Computer Interfaces as Optimization Problems-A Review. Front Neurosci 2021; 14:546656. [PMID: 33551716 PMCID: PMC7859253 DOI: 10.3389/fnins.2020.546656] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2020] [Accepted: 12/18/2020] [Indexed: 11/13/2022] Open
Abstract
Electroencephalogram (EEG) is one of the common modalities of monitoring the mental activities. Owing to the non-invasive availability of this system, its applicability has seen remarkable developments beyond medical use-cases. One such use case is brain-computer interfaces (BCI). Such systems require the usage of high resolution-based multi-channel EEG devices so that the data collection spans multiple locations of the brain like the occipital, frontal, temporal, and so on. This results in huge data (with high sampling rates) and with multiple EEG channels with inherent artifacts. Several challenges exist in analyzing data of this nature, for instance, selecting the optimal number of EEG channels or deciding what best features to rely on for achieving better performance. The selection of these variables is complicated and requires a lot of domain knowledge and non-invasive EEG monitoring, which is not feasible always. Hence, optimization serves to be an easy to access tool in deriving such parameters. Considerable efforts in formulating these issues as an optimization problem have been laid. As a result, various multi-objective and constrained optimization functions have been developed in BCI that has achieved reliable outcomes in device control like neuro-prosthetic arms, application control, gaming, and so on. This paper makes an attempt to study the usage of optimization techniques in formulating the issues in BCI. The outcomes, challenges, and major observations of these approaches are discussed in detail.
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Affiliation(s)
- Shireen Fathima
- Department of Electronics and Communication Engineering, HKBK College of Engineering, Bengaluru, India
| | - Sheela Kiran Kore
- Department of Electronics and Communication Engineering, KLE Dr. M. S. Sheshagiri College of Engineering and Technology, Belgaum, India
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44
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Chen X, Tao X, Wang FL, Xie H. Global research on artificial intelligence-enhanced human electroencephalogram analysis. Neural Comput Appl 2021. [DOI: 10.1007/s00521-020-05588-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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45
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Usman SM, Khalid S, Bashir Z. Epileptic seizure prediction using scalp electroencephalogram signals. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.01.001] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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46
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Zheng Q, Chen T, Zhou W, Xie L, Su H. Gene prediction by the noise-assisted MEMD and wavelet transform for identifying the protein coding regions. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2020.12.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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47
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Analysis of epileptic EEG signals by using dynamic mode decomposition and spectrum. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2020.11.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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48
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Siuly S, Khare SK, Bajaj V, Wang H, Zhang Y. A Computerized Method for Automatic Detection of Schizophrenia Using EEG Signals. IEEE Trans Neural Syst Rehabil Eng 2020; 28:2390-2400. [PMID: 32897863 DOI: 10.1109/tnsre.2020.3022715] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Diagnosis of schizophrenia (SZ) is traditionally performed through patient's interviews by a skilled psychiatrist. This process is time-consuming, burdensome, subject to error and bias. Hence the aim of this study is to develop an automatic SZ identification scheme using electroencephalogram (EEG) signals that can eradicate the aforementioned problems and support clinicians and researchers. This study introduces a methodology design involving empirical mode decomposition (EMD) technique for diagnosis of SZ from EEG signals to perfectly handle the behavior of non-stationary and nonlinear EEG signals. In this study, each EEG signal is decomposed into intrinsic mode functions (IMFs) by the EMD algorithm and then twenty-two statistical characteristics/features are calculated from these IMFs. Among them, five features are selected as significant feature applying Kruskal Wallis test. The performance of the obtained feature set is tested through several renowned classifierson a SZ EEG dataset. Among the considered classifiers, theensemble bagged tree performed as the best classifier producing 93.21% correct classification rate for SZ, with an overall accuracy of 89.59% for IMF 2. These results indicate that EEG signals discriminate SZ patients from healthy control (HC) subjects efficiently and have the potential to become a tool for the psychiatrist to support the positive diagnosis of SZ.
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49
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Liu Y, Lin Y, Jia Z, Ma Y, Wang J. Representation based on ordinal patterns for seizure detection in EEG signals. Comput Biol Med 2020; 126:104033. [PMID: 33091826 DOI: 10.1016/j.compbiomed.2020.104033] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Revised: 09/25/2020] [Accepted: 10/01/2020] [Indexed: 11/26/2022]
Abstract
EEG signals carry rich information about brain activity and play an important role in the diagnosis and recognition of epilepsy. Numerous algorithms using EEG signals to detect seizures have been developed in recent decades. However, most of them require well-designed features that highly depend on domain-specific knowledge and algorithm expertise. In this study, we introduce the unigram ordinal pattern (UniOP) and bigram ordinal pattern (BiOP) representations to capture the different underlying dynamics of time series, which only assumes that time series derived from different dynamics can be characterized by repeated ordinal patterns. Specifically, we first transform each subsequence in a time series into the corresponding ordinal pattern in terms of the ranking of values and consider the distribution of ordinal patterns of all subsequences as the UniOP representation. Furthermore, we consider the distribution of the cooccurrence of ordinal patterns as the BiOP representation to characterize the contextual information for each ordinal pattern. We then combine the proposed representations with the nearest neighbor algorithm to evaluate its effectiveness on three publicly available seizure datasets. The results on the Bonn EEG dataset demonstrate that this method provides more than 90% accuracy, sensitivity, and specificity in most cases and outperforms several state-of-the-art methods, which proves its ability to capture the key information of the underlying dynamics of EEG time series at healthy, seizure-free, and seizure states. The results on the second dataset are comparable with the state-of-the-art method, showing the good generalization ability of the proposed method. All performance metrics on the third dataset are approximately 89%, which demonstrates that the proposed representations are suitable for large-scale datasets.
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Affiliation(s)
- Yunxiao Liu
- Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University, Beijing, 100044, PR China; CAAC Key Laboratory of Intelligent Passenger Service of Civil Aviation, Beijing, China
| | - Youfang Lin
- Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University, Beijing, 100044, PR China; CAAC Key Laboratory of Intelligent Passenger Service of Civil Aviation, Beijing, China
| | - Ziyu Jia
- Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University, Beijing, 100044, PR China; CAAC Key Laboratory of Intelligent Passenger Service of Civil Aviation, Beijing, China
| | - Yan Ma
- Division of Interdisciplinary Medicine and Biotechnology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA
| | - Jing Wang
- Beijing Key Lab of Traffic Data Analysis and Mining, School of Computer and Information Technology, Beijing Jiaotong University, Beijing, 100044, PR China; CAAC Key Laboratory of Intelligent Passenger Service of Civil Aviation, Beijing, China.
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50
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Epileptic seizure detection via logarithmic normalized functional values of singular values. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2020.102086] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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