Characterizing fish responses to a river restoration over 21 years based on species' traits

Understanding ecological response to physical characteristics in side channels of a large floodplain-river ecosystem

Side channels in large floodplain rivers serve a variety of important ecological roles, particularly in reaches where habitat conditions have been degraded or diminished. We developed hypotheses regarding side channel ecological structure whereby we expected species richness of young-of-year fishes to generally be higher in shallower, more physically heterogeneous side channels with lower velocities, with differences based on reproductive guild. We also hypothesized species richness of adult fishes to be higher in side channels with greater heterogeneity that could support diverse foraging resources and provide refugia during extreme flow conditions. To test these hypotheses, we used a 28-year fish community dataset from the Upper Mississippi and Illinois Rivers. Across six study reaches, we assessed metrics of side channel physical size, heterogeneity, and connectivity that were hypothesized to explain variance of fish community response, while accounting for site-level factors across 52 side channels using multilevel models. We then used these side channel-level characteristics in a K-means cluster analysis to classify 1126 side channels across 32 reaches of the river system. Our results indicated that the relative explanatory contributions of physical metrics varied by response variable, providing varying evidence in support of our hypotheses, and indicating that different forms of heterogeneity matter in different ways. Side channel-level factors were more explanatory of fish community responses in side channels of upstream reaches compared to downstream reaches and percent wet forest was the most explanatory side channel-level factor of fish community responses across all models. Our classification of side channels indicated strong spatial contrasts in the abundance and diversity of side channels across reaches. Scaling up to understand how the diversity and abundance of different types of side channels contributes to landscape-scale ecological functions and processes would be useful for establishing targets for reach-scale physical heterogeneity.

Short-term hydromorphological and ecological responses of using woody structures for river restoration in a tailing-impacted tropical river

Gualaxo do Norte River (GNR), in southeastern Brazil, was impacted by iron ore tailings from the Fundão Dam rupture (November 2015). The deposition of tailings on the riverbed has changed the hydrogeomorphological characteristics of the GNR, resulting in a decrease in the diversity of physical habitats and ecological biodiversity. As part of the process of restoration and management of this damaged ecosystem, the river restoration project ReNaturalize was implemented to restructure the geomorphological characteristics and the physical habitat and to enhance the reestablishment of biota, mainly for macroinvertebrates and fishes. For this goal, 203 wooden structures, such as tree trunks, branches, and grass were installed in two sections of GNR (T6R and T7R), totaling 1.8 km long. The effectiveness of the project was evaluated by an assessment that followed a before and after and control and impacted (BACI) design. Upstream of each Restored reach there is a Control and a Reference reach. Four campaigns were carried out, two before and two after the restoration process. After 14 months of the woody installation, an increase in hydraulic retention in the restored reaches was observed (T6R-20.2%; T7R-63.5%), when compared with the Control reaches, which favored the accumulation of sediments (T6R-388 metric tons; T7R-396 metric tons). This enhanced the formation of natural tailings barriers and promoted the enrichment of substrate types (T6R-39.2%; T7R-43%). The benthic macroinvertebrate community showed an increase in the total abundance (T6-110%), including the most sensitive groups (T6R-124%; T7R-124%). For fish, the increase was up to 81.38% with hand nets capture, indicating the recruitment of juveniles, and the abundance and the biomass of some species were also higher (up to 100%) than the Control reaches. The results indicated that the Restored reach is already qualitatively and quantitatively better than the Control reach and similar to the Reference reach, indicating the success of the study. Integr Environ Assess Manag 2023;19:648-662. © 2022 SETAC.

Conservation and restoration of riverine spawning habitats require fine-scale functional connectivity and functional heterogeneity

A severe extinction crisis of migratory fish caused by extensive hydropower development and climate change has attracted widespread environmental concern. Conserving and restoring riverine spawning habitat for migratory species is advantageous for population recovery. Depending on the reproductive characteristics of fish with adhesive eggs, functionally heterogeneous spawning habitats are required to support different stages of reproductive activity. However, few aquatic assessment models are available to consider the fine-scale functional connectivity between heterogeneous spawning habitats. This study developed a function-based framework that linked fine-scale functional connectivity modeling to habitat quality evaluations for the population recovery of migratory fish. The function path tree (FPT) model within the framework could identified the spatiotemporal dynamics of fine-scale connectivity patterns by emphasizing the attribute-dependence of patch arrangements. Here, we used the Chinese sturgeon, a well-known endangered anadromous fish producing adhesive eggs in the Yangtze River, as an example to demonstrate the applicability of the framework. Additionally, the ecological effectiveness of river restorations to overcome the detrimental influence of climate change on discharge decrease was also investigated. Compared to prior research, our methodology effectively enhanced the predictive performance of spatiotemporal distributions and quality assessments of spawning habitats. A strong correlation was discovered between the ecological profit indicator (HQI) and the estimated fecundity (R² = 0.941) and field-collected eggs (R² = 0.918). The minimum spawning discharge decreased from 8400 m³/s to 7000 m³/s by substrate restoration, with the optimal HQI growth rate of 52.7 % at Q < 8400 m³/s. This work will optimize long-term conservation for imperiled migratory species and help develop strategies to build resilience to ongoing environmental changes in flow-reduced rivers.

Use of a mechanistic growth model in evaluating post-restoration habitat quality for juvenile salmonids

Individual growth data are useful in assessing relative habitat quality, but this approach is less common when evaluating the efficacy of habitat restoration. Furthermore, available models describing growth are infrequently combined with computational approaches capable of handling large data sets. We apply a mechanistic model to evaluate whether selection of restored habitat can affect individual growth. We used mark-recapture to collect size and growth data on sub-yearling Chinook salmon and steelhead in restored and unrestored habitat in five sampling years (2009, 2010, 2012, 2013, 2016). Modeling strategies differed for the two species: For Chinook, we compared growth patterns of individuals recaptured in restored habitat over 15-60 d with those not recaptured regardless of initial habitat at marking. For steelhead, we had enough recaptured fish in each habitat type to use the model to directly compare habitats. The model generated spatially explicit growth parameters describing size of fish over the growing season in restored vs. unrestored habitat. Model parameters showed benefits of restoration for both species, but that varied by year and time of season, consistent with known patterns of habitat partitioning among them. The model was also supported by direct measurement of growth rates in steelhead and by known patterns of spatio-temporal partitioning of habitat between these two species. Model parameters described not only the rate of growth, but the timing of size increases, and is spatially explicit, accounting for habitat differences, making it widely applicable across taxa. The model usually supported data on density differences among habitat types in Chinook, but only in a couple of cases in steelhead. Modeling growth can thus prevent overconfidence in distributional data, which are commonly used as the metric of restoration success.

The effect of lateral connectedness on the taxonomic and functional structure of fish communities in a lowland river floodplain

In river floodplains many conservation programs focus on the main river channel as the richest in species. Lateral floodplain waterbodies, which contribute largely to functional processes in river systems, often remain overlooked and exposed to anthropogenic pressures. Although the role of hydrological connectedness between lateral waterbodies and the main river on taxonomic composition of fish communities is well understood, effects on functional community composition is much less studied. Abundance data of fish communities were gathered from 152 electrofishing sites in the main channel and lateral floodplain waterbodies of the river Lippe (Germany), over 18 years. These data were used to compare taxonomic, functional, conservation and recreational fishing aspects along the floodplain lateral connectedness gradient. Fish species richness decreased along the lateral continuum from the main river channel to isolated floodplain waterbodies. In contrast, the relative abundance of endangered and also of non-native species increased along this gradient, highlighting the ecological and conservational importance of floodplain waterbodies. Species composition in floodplain waterbodies differed across the connectedness gradient showing distinct assemblages which were not merely subsets of the main channel. The variability of life-history and feeding strategists among classes of lateral connectedness confirmed the importance of each connectivity class in contributing to the overall floodplain functional diversity. This study highlights the need of preserving fish taxonomic and functional biodiversity across the floodplain as one integrated hydrosystem. Conservation and restoration measures should therefore extend to include the whole floodplain area and the complete spectrum of differently connected floodplain waterbodies in addition to the main channel of the river.

Short-term response of fish assemblages to instream habitat restoration in heavily impacted streams

ABSTRACT Habitat homogenization has been a major impact in stream ecosystems, and it is considered one of the main drivers of biotic homogenization as well, leading to the loss of water quality and fish diversity. In this study, we added artificial woody structures and leaf packs in physically impacted streams to test if the additions can improve habitat complexity and change the taxonomic and functional structure of fish communities. The experiment was done in eight streams impacted by siltation, deforestation, and habitat homogeneization, inserted in an agricultural landscape from the Upper Paraná River Basin, and lasted 112 days. The provision of artificial microhabitats increased instream habitat diversity by creating patches of organic matter deposits, changing flow, and providing substrate for grass colonization of the instream habitat. The experimental manipulation also changed fish species abundance. Nine species contributed to these changes, five decreased and four increased in abundance, indicating species responded differently to the experimental manipulation. However, overall species richness, diversity, and community functional traits remained unaltered. These results indicate that short-term habitat restoration on a local scale may not be enough to promote changes in fish community attributes of streams that are heavily impacted.

Linkages between flow regime, biota, and ecosystem processes: Implications for river restoration

River ecosystems are highly biodiverse, influence global biogeochemical cycles, and provide valued services. However, humans are increasingly degrading fluvial ecosystems by altering their streamflows. Effective river restoration requires advancing our mechanistic understanding of how flow regimes affect biota and ecosystem processes. Here, we review emerging advances in hydroecology relevant to this goal. Spatiotemporal variation in flow exerts direct and indirect control on the composition, structure, and dynamics of communities at local to regional scales. Streamflows also influence ecosystem processes, such as nutrient uptake and transformation, organic matter processing, and ecosystem metabolism. We are deepening our understanding of how biological processes, not just static patterns, affect and are affected by stream ecosystem processes. However, research on this nexus of flow-biota-ecosystem processes is at an early stage. We illustrate this frontier with evidence from highly altered regulated rivers and urban streams. We also identify research challenges that should be prioritized to advance process-based river restoration.

Effect of river restoration on life-history strategies in fish communities

Assessments of river restoration outcomes are mostly based on taxonomic identities of species, which may not be optimal because a direct relationship to river functions remains obscure and results are hardly comparable across biogeographic borders. The use of ecological species trait information instead of taxonomic units may help to overcome these challenges. Abundance data for fish communities were gathered from 134 river restoration projects conducted in Switzerland, Germany and Finland, monitored for up to 15 years. These data were related to a dataset of 22 categories of ecological traits describing fish life-history strategies to assess the outcome of the restoration projects. Restoration increased trait functional diversity and evenness in projects that were situated in the potamal zone of rivers. Restoration effect increased with the length of the restored river reaches. In areas with low levels of anthropogenic land use, the peak of the restoration effect was reached already within one to five years after the restoration and effect receded thereafter, while communities responded later in areas with higher levels of anthropogenic land use. In the lower potamal zone, a shift towards opportunistic life-history strategists was observed. In the upper rhithral zone, in contrast, species with an opportunistic life-history strategy increased only in the first five years of restoration, followed by a shift towards equilibrium strategists at restorations older than 5 years. This pattern was more pronounced in rivers with higher level of anthropogenic land use and longer restored river reaches. Restoration reduced the variability in community trait composition between river reaches suggesting that community trait composition within these zones converges when rivers are restored. This study showed how ecological traits are suitable to analyse restoration outcomes and how such an approach can be used for the evaluation and comparison of environmental management actions across geographical regions.

Effect of flow-sediment regime on benthic invertebrate communities: Long-term analysis in a regulated floodplain lake

Flow and sediment co-create habitat structure and dynamics within river and lake systems, of which the ecological effects are well-documented. But the temporal variability of aquatic community response to continuous flow-sediment alterations is less well-known. This paper explored aquatic biota response to the flow-sediment regime in a broader temporal context using long-term paired hydrological database and monitoring data of benthic invertebrates in Dongting Lake. The inter-annual variations of benthic invertebrates and certain flow and sediment variables were synchronous. Community diversity parameters showed different response to different hydrological events and particularly revealed a short-term peak in the first two years after the operation of the Three Gorges Dam. This finding affirmed the importance of the time series study. The overall flow-sediment regime, calculated from 15 flow and sediment characteristics, affected community structures and could also affect benthic invertebrates by affecting the water quality. The combination of variables, including sediment inputs load, sediment exports/inputs ratio and the duration of low water level, could best explain the variation of benthic invertebrate assemblages and should be given the greatest management concern. When individual components of the flow-sediment regime were analysed, the response patterns of community parameters to different environmental variables or to different gradients of the same variables were complex. Our results suggest that the sediment seemed to be a more influential stressor than flow, especially erosion, which could significantly reduce total abundance and species richness. The effect of the flow regime was reflected by the duration of the low water level. Stressor gradients and the response patterns of different taxa to different stressors should be considered by river and lake managers. The results would provide valuable information for the design of lake management strategies and upstream reservoir regulation rules.

Extended Water-Level Drawdowns in Dammed Rivers Enhance Fish Habitat: Environmental Pool Management in the Upper Mississippi River

Environmental Pool Management (EPM) can improve ecosystem function in rivers by restoring aspects of the natural flow regime lost to dam construction. EPM recreates summer baseflow conditions and promotes the growth of terrestrial vegetation which is inundated in the fall, thereby improving habitat heterogeneity for many aquatic taxa. A three-year experiment was conducted wherein terrestrial floodplain areas were dewatered through EPM water-level reductions and the resulting terrestrial vegetation was (1) allowed to remain or (2) removed in paired plots in Mississippi River pool 25. Fish assemblage and abundance were quantified in paired plots after inundation. Abundances of many fish species were greater in vegetated plots, especially for species that utilize vegetation during portions of their life history. Fish assemblages varied more between plot types when the magnitude of EPM water-level drawdowns was greater, which produced greater vegetation growth. Young-of-year individuals, especially from small, early maturing species and/or species reliant on vegetation for refuge, feeding, or life history, utilized vegetated plots more than devegetated plots. Vegetation growth produced under EPM was heavily used by river fishes, including young-of-year individuals, which may ultimately positively influence recruitment. Increased habitat heterogeneity may mitigate some of the negative impacts of dam construction and water-level regulation on river fishes. Annual variability in vegetation responses that occurs under EPM enhances natural environmental variability which could ultimately contribute to increased fish diversity. Low-cost programs like EPM can be implemented as a part of adaptive management plans to help maintain biodiversity and ecosystem health in anthropogenically altered rivers.