Using soundscapes to detect variable degrees of human influence on tropical forests in Papua New Guinea

VGGish-based detection of biological sound components and their spatio-temporal variations in a subtropical forest in eastern China

Passive acoustic monitoring technology is widely used to monitor the diversity of vocal animals, but the question of how to quickly extract effective sound patterns remains a challenge due to the difficulty of distinguishing biological sounds within multiple sound sources in a soundscape. In this study, we address the potential application of the VGGish model, pre-trained on Google's AudioSet dataset, for the extraction of acoustic features, together with an unsupervised clustering method based on the Gaussian mixture model, to identify various sound sources from a soundscape of a subtropical forest in China. The results show that different biotic and abiotic components can be distinguished from various confounding sound sources. Birds and insects were the two primary biophony sound sources, and their sounds displayed distinct temporal patterns across both diurnal and monthly time frames and distinct spatial patterns in the landscape. Using the clustering and modeling method of the general sound feature set, we quickly depicted the soundscape in a subtropical forest ecosystem, which could be used to track dynamic changes in the acoustic environment and provide help for biodiversity and ecological environment monitoring.

Soundscapes and deep learning enable tracking biodiversity recovery in tropical forests

Tropical forest recovery is fundamental to addressing the intertwined climate and biodiversity loss crises. While regenerating trees sequester carbon relatively quickly, the pace of biodiversity recovery remains contentious. Here, we use bioacoustics and metabarcoding to measure forest recovery post-agriculture in a global biodiversity hotspot in Ecuador. We show that the community composition, and not species richness, of vocalizing vertebrates identified by experts reflects the restoration gradient. Two automated measures - an acoustic index model and a bird community composition derived from an independently developed Convolutional Neural Network - correlated well with restoration (adj-R² = 0.62 and 0.69, respectively). Importantly, both measures reflected composition of non-vocalizing nocturnal insects identified via metabarcoding. We show that such automated monitoring tools, based on new technologies, can effectively monitor the success of forest recovery, using robust and reproducible data.

Loss of temporal structure of tropical soundscapes with intensifying land use in Borneo

Conservation and sustainable management efforts in tropical forests often lack reliable, effective, and easily-communicated ways to measure the biodiversity status of a protected or managed landscape. The sounds that many tropical species make can be recorded by pre-programmed devices and analysed to yield measures of biodiversity. Interpreting the resulting soundscapes has developed along two paths: analysing the whole soundscape using acoustic indices, used as a proxy of biodiversity, or focusing on individual species that can be either manually or automatically recognized from the soundscape. Here we develop an intermediate approach to divide the soundscape into frequency categories belonging to broad taxonomic groups of vocalizing animals. While the method was unable to distinguish between amphibian and mammal communities, it was successful in assigning parts of the soundscape as likely produced by birds and insects. Applying the approach in Borneo revealed that, with increasing land use intensity, i) the spectral saturation of the soundscape, a proxy of species richness, loses dawn and dusk peaks, ii) bird acoustic communities lose recurrent diurnal patterns, becoming less synchronized across sites, and that iii) insect Soundscape Saturation increases at night. If soundscapes are partitioned similarly in different regions, our method could be used to bridge soundscape-level and individual-species level analyses. Regaining dawn and dusk peaks, the synchrony of bird acoustic communities, and losing nocturnal dominance of insect could be used as a set of simple indicators of tropical forest retaining high levels of biodiversity.

Animal soundscapes reveal key markers of Amazon forest degradation from fire and logging

Safeguarding tropical forest biodiversity requires solutions for monitoring ecosystem structure over time. In the Amazon, logging and fire reduce forest carbon stocks and alter habitat, but the long-term consequences for wildlife remain unclear, especially for lesser-known taxa. Here, we combined multiday acoustic surveys, airborne lidar, and satellite time series covering logged and burned forests (n = 39) in the southern Brazilian Amazon to identify acoustic markers of forest degradation. Our findings contradict expectations from the Acoustic Niche Hypothesis that animal communities in more degraded habitats occupy fewer “acoustic niches” defined by time and frequency. Instead, we found that aboveground biomass was not a consistent proxy for acoustic biodiversity due to the divergent patterns of “acoustic space occupancy” between logged and burned forests. Ecosystem soundscapes highlighted a stark, and sustained reorganization in acoustic community assembly after multiple fires; animal communication networks were quieter, more homogenous, and less acoustically integrated in forests burned multiple times than in logged or once-burned forests. These findings demonstrate strong biodiversity cobenefits from protecting burned Amazon forests from recurrent fire. By contrast, soundscape changes after logging were subtle and more consistent with acoustic community recovery than reassembly. In both logged and burned forests, insects were the dominant acoustic markers of degradation, particularly during midday and nighttime hours, which are not typically sampled by traditional biodiversity field surveys. The acoustic fingerprints of degradation history were conserved across replicate recording locations, indicating that soundscapes may offer a robust, taxonomically inclusive solution for digitally tracking changes in acoustic community composition over time.

Temporal Soundscape Patterns in a Panamanian Tree Diversity Experiment: Polycultures Show an Increase in High Frequency Cover

In this ecoacoustic study we used the setting of a tropical tree diversity planted forest to analyze temporal patterns in the composition of soundscapes and to test the effects of tree species richness on associated biodiversity measured as acoustic diversity. The analysis of soundscapes offers easy, rapid and sustainable methods when assessing biodiversity. During the last years the quantification of regional or global acoustic variability in sounds and the analysis of different soundscapes has been evolving into an important tool for biodiversity conservation, especially since case studies confirmed a relationship between land-use management, forest structure and acoustic diversity. Here we analyzed soundscapes from two seasons (dry and rainy season) and aurally inspected a subset of audio recordings to describe temporal patterns in soundscape composition. Several acoustic indices were calculated and we performed a correlation analysis and a non-metric multidimensional scaling analysis to identify acoustic indices that: (i) were complementary to each other and such represented different aspects of the local soundscapes and (ii) related most strongly to differences in acoustic composition among tree species richness, season and day phase. Thus, we chose “High Frequency Cover,” “Bioacoustic Index,” and “Events Per Second” to test the hypothesis that acoustic diversity increases with increasing tree species richness. Monocultures differed significantly from polycultures during night recordings, with respect to High Frequency Cover. This index covers sounds above 8 kHz and thus represents part of the orthopteran community. We conclude that increasing tree species richness in a young tropical forest plantation had positive effects on the vocalizing communities. The strongest effects were found for acoustic activity of the orthopteran community. In contrast to birds, orthopterans have smaller home ranges, and are therefore important indicator species for small scale environmental conditions.

Scale-free distribution of silences

Soundscape studies help us understand ecological processes, biodiversity distribution, anthropic influences, and even urban quality, across a wide variety of places and time periods. In this work, instead of looking for differences, we ask if there are common characteristics shared by all soundscapes. Based on our results, we propose a universal distribution of quiet-time (background noise) and sound-time (acoustic energy bursts) in audio recordings. We analyzed one continuous hour during daylight and one at night, from ten randomly selected days in each environment: urban, dry forest, savanna, rupestrian field, Atlantic forest, marine, and freshwater. We found that the histograms of the quiet-time followed a power law for all scenarios analyzed, they present fractal events or scale-free distributions. This distribution covers up to four orders of magnitude, with an exponent of 1.6≤α≤2.0 for all soundscapes. By contrast, the sound-time distribution in all environments followed a log-normal or timescale dependence, with a typical time for the duration of sounds (0.06-0.12 s). Such time duration limitation can be related to the physiology of sound emission in animals.

A Comprehensive Overview of Technologies for Species and Habitat Monitoring and Conservation

The range of technologies currently used in biodiversity conservation is staggering, with innovative uses often adopted from other disciplines and being trialed in the field. We provide the first comprehensive overview of the current (2020) landscape of conservation technology, encompassing technologies for monitoring wildlife and habitats, as well as for on-the-ground conservation management (e.g., fighting illegal activities). We cover both established technologies (routinely deployed in conservation, backed by substantial field experience and scientific literature) and novel technologies or technology applications (typically at trial stage, only recently used in conservation), providing examples of conservation applications for both types. We describe technologies that deploy sensors that are fixed or portable, attached to vehicles (terrestrial, aquatic, or airborne) or to animals (biologging), complemented with a section on wildlife tracking. The last two sections cover actuators and computing (including web platforms, algorithms, and artificial intelligence).

Eco-Acoustic Indices to Evaluate Soundscape Degradation Due to Human Intrusion

The characterization of environmental quality and the detection of the first sign of environmental stress, with reference to human intrusion, is currently a very important goal to prevent further environmental degradation, and consequently habitat destruction, in order to take appropriate preservation measures. Besides the traditional field observation and satellite remote sensing, geophonic and/or biophonic sounds have been proposed as potential indicators of terrestrial and aquatic settings’ status. In this work, we analyze a series of short audio-recordings taken in urban parks and bushes characterized by the presence of different human-generated-noise and species abundance. This study aims to propose a tool devoted to the investigation of urban and natural environments in a context with different soundscape qualities, such as, for example, those that can be found in urban parks. The analysis shows the ways in which it is possible to distinguish among different habitats by the use of a combination of different acoustic and sound ecology indices.