1
|
Sato S, Appeldorff C, Wangensteen OS, Garcés-Pastor S, Laumer CE, Herranz M, Giribet G, Renault D, Rask Møller P, Worsaae K. Phylogenomics of the rarest animals: a second species of Micrognathozoa identified by machine learning. Proc Biol Sci 2025; 292:20242867. [PMID: 39968621 PMCID: PMC11836703 DOI: 10.1098/rspb.2024.2867] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2024] [Revised: 01/20/2025] [Accepted: 01/20/2025] [Indexed: 02/20/2025] Open
Abstract
The latest animal phylum to be discovered, Micrognathozoa, constitutes a rare group of limnic meiofauna. These microscopic 'jaw animals' are among the smallest metazoans yet possess highly complex jaw structures. The single species of Micrognathozoa, Limnognathia maerski Kristensen and Funch, 2000, was first described from Greenland, later reported from a remote Subantarctic island and more recently discovered in the Pyrenees on the European continent. Successful collections of these three known populations facilitated investigations of the intraphylum relationships and species limits within Limnognathia for the first time. Through detailed anatomical comparisons, we substantiate the lack of morphological differences between the three geographically disjunct populations. With transcriptomic data from single specimens, we conducted the first intraphylum phylogenetic analyses and extensively tested species hypotheses using standard approaches and novel machine learning methods. Analyses clearly delimited the Subantarctic population, here described as Limnognathia desmeti sp. nov., the second species of Micrognathozoa, but did not definitively split the Greenland and Pyrenees populations as separate species. Divergence dating analysis suggests the disjunct distribution of Micrognathozoa is not human mediated but the result of long-distance dispersal raising questions about their dispersal capabilities and potential undiscovered populations.
Collapse
Affiliation(s)
- Shoyo Sato
- Marine Biological Section, Department of Biology, University of Copenhagen, Copenhagen2100, Denmark
| | - Cecilie Appeldorff
- Marine Biological Section, Department of Biology, University of Copenhagen, Copenhagen2100, Denmark
| | - Owen S. Wangensteen
- Department of Evolutionary Biology Ecology and Environmental Sciences & Biodiversity Research Institute (IRBio), Universitat de Barcelona, Barcelona, Catalonia08028, Spain
| | - Sandra Garcés-Pastor
- Department of Evolutionary Biology Ecology and Environmental Sciences & Biodiversity Research Institute (IRBio), Universitat de Barcelona, Barcelona, Catalonia08028, Spain
- Institute of Marine Sciences (ICM), CSIC, Barcelona, Catalonia08003, Spain
| | | | - María Herranz
- Marine Biological Section, Department of Biology, University of Copenhagen, Copenhagen2100, Denmark
- Area of Biodiversity and Conservation, Superior School of Experimental Science and Technology (ESCET), Rey Juan Carlos University, Móstoles, Madrid, Spain
- Global Change Research Institute (IICG-URJC), Móstoles, Madrid28933, Spain
| | - Gonzalo Giribet
- Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
| | - David Renault
- UMR CNRS 6553 ECOBIO (Ecosystèmes, biodiversité, évolution), Université Rennes, avenue du Général Leclerc, Rennes cedex35042, France
- Institut Universitaire de France, Paris, France
| | - Peter Rask Møller
- Natural History Museum of Denmark, University of Copenhagen, Copenhagen2100, Denmark
| | - Katrine Worsaae
- Marine Biological Section, Department of Biology, University of Copenhagen, Copenhagen2100, Denmark
| |
Collapse
|
2
|
Rosenfeld S, Maturana CS, Gañan M, Rendoll Cárcamo J, Díaz A, Contador T, Aldea C, Gonzalez-Wevar C, Orlando J, Poulin E. Revealing the hidden biodiversity of Antarctic and the Magellanic Sub-Antarctic Ecoregion: A comprehensive study of aquatic invertebrates from the BASE Project. Biodivers Data J 2023; 11:e108566. [PMID: 38318521 PMCID: PMC10840509 DOI: 10.3897/bdj.11.e108566] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Accepted: 08/11/2023] [Indexed: 02/07/2024] Open
Abstract
Background Antarctica, its outlying archipelagoes and the Magellanic Subantarctic (MSA) ecoregion are amongst the last true wilderness areas remaining on the planet. Therefore, the publication, citation and peer review of their biodiversity data are essential. The new Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), a Chilean scientific initiative funded by the National Agency of Research and Innovation, contributes 770 new records of aquatic invertebrates as a point of reference for present-day biodiversity research at these latitudes. New information The occurrence dataset presented here has never been released before and is the result of the systematic recording of occurrences of several taxa across the Antarctic, Subantarctic and Magellanic Subantarctic ecoregions. We collected data from marine and freshwater invertebrates across numerous samplings from 2008 to 2023. From the 770 occurrences, we identified 160 taxa, 125 at species level and 35 at the genus level. The database has been registered in the Global Biodiversity Information Facility (GBIF). The publication of this data paper was funded by the Belgian Science Policy Office (BELSPO, contract n°FR/36/AN1/AntaBIS) in the Framework of EU-Lifewatch as a contribution to the SCAR Antarctic biodiversity portal (biodiversity.aq).
Collapse
Affiliation(s)
- Sebastian Rosenfeld
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
- Cape Horn International Center (CHIC), Puerto Williams, ChileCape Horn International Center (CHIC)Puerto WilliamsChile
- Centro de Investigación Gaia‑Antártica, Universidad de Magallanes, Punta Arenas, ChileCentro de Investigación Gaia‑Antártica, Universidad de MagallanesPunta ArenasChile
| | - Claudia S. Maturana
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
- Cape Horn International Center (CHIC), Puerto Williams, ChileCape Horn International Center (CHIC)Puerto WilliamsChile
| | - Melisa Gañan
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
- Cape Horn International Center (CHIC), Puerto Williams, ChileCape Horn International Center (CHIC)Puerto WilliamsChile
- Laboratorio de Estudios Dulceacuícolas Wankara, Programa de Conservación Biocultural Subantártica, Universidad de Magallanes, Puerto Williams, ChileLaboratorio de Estudios Dulceacuícolas Wankara, Programa de Conservación Biocultural Subantártica, Universidad de MagallanesPuerto WilliamsChile
- Millennium Nucleus of Austral Invasive Salmonids - INVASAL, Concepción, ChileMillennium Nucleus of Austral Invasive Salmonids - INVASALConcepciónChile
- FEHM-Lab (Freshwater Ecology, Hydrology and Management), Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Facultat de Biologia, Universitat de Barcelona (UB), Diagonal 643, 08028, Barcelona, SpainFEHM-Lab (Freshwater Ecology, Hydrology and Management), Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Facultat de Biologia, Universitat de Barcelona (UB), Diagonal 643, 08028BarcelonaSpain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Diagonal 643, 08028, Barcelona, SpainInstitut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Diagonal 643, 08028BarcelonaSpain
| | - Javier Rendoll Cárcamo
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
- Cape Horn International Center (CHIC), Puerto Williams, ChileCape Horn International Center (CHIC)Puerto WilliamsChile
- Laboratorio de Estudios Dulceacuícolas Wankara, Programa de Conservación Biocultural Subantártica, Universidad de Magallanes, Puerto Williams, ChileLaboratorio de Estudios Dulceacuícolas Wankara, Programa de Conservación Biocultural Subantártica, Universidad de MagallanesPuerto WilliamsChile
| | - Angie Díaz
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
- Departamento de Zoología, Universidad de Concepción, Concepción, ChileDepartamento de Zoología, Universidad de ConcepciónConcepciónChile
| | - Tamara Contador
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
- Cape Horn International Center (CHIC), Puerto Williams, ChileCape Horn International Center (CHIC)Puerto WilliamsChile
- Laboratorio de Estudios Dulceacuícolas Wankara, Programa de Conservación Biocultural Subantártica, Universidad de Magallanes, Puerto Williams, ChileLaboratorio de Estudios Dulceacuícolas Wankara, Programa de Conservación Biocultural Subantártica, Universidad de MagallanesPuerto WilliamsChile
- Millennium Nucleus of Austral Invasive Salmonids - INVASAL, Concepción, ChileMillennium Nucleus of Austral Invasive Salmonids - INVASALConcepciónChile
| | - Cristian Aldea
- Centro de Investigación Gaia‑Antártica, Universidad de Magallanes, Punta Arenas, ChileCentro de Investigación Gaia‑Antártica, Universidad de MagallanesPunta ArenasChile
| | - Claudio Gonzalez-Wevar
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
- Facultad de Ciencias, Centro FONDAP IDEAL, Instituto de Ciencias Marinas y Limnológicas (ICML), Universidad Austral de Chile, Valdivia, ChileFacultad de Ciencias, Centro FONDAP IDEAL, Instituto de Ciencias Marinas y Limnológicas (ICML), Universidad Austral de ChileValdiviaChile
| | - Julieta Orlando
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
- Departamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile, Santiago, ChileDepartamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de ChileSantiagoChile
| | - Elie Poulin
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, ChileMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE)SantiagoChile
| |
Collapse
|
3
|
Maturana CS, Biersma EM, Díaz A, González-Wevar C, Contador T, Convey P, Jackson JA, Poulin E. Survivors and colonizers: Contrasting biogeographic histories reconciled in the Antarctic freshwater copepod Boeckella poppei. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.1012852] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022] Open
Abstract
Two main hypotheses have been proposed to explain the contemporary distribution of Antarctic terrestrial biota. We assess whether the current distribution of maritime Antarctic populations of the freshwater copepod Boeckella poppei is the result of (1) a post-Last Glacial Maximum (LGM) colonization, or whether (2) the species survived in regional glacial refugia throughout the LGM and earlier glaciations. Using 438 specimens from 34 different sampling sites across Southern South America, South Georgia, South Orkney Islands, South Shetland Islands, and the Antarctic Peninsula, we analyzed mitochondrial and nuclear sequences to uncover patterns of genetic diversity and population structure. We also performed median-joining haplotype network, phylogenetic reconstruction, and divergence time analyses. Finally, we evaluated past demographic changes and historical scenarios using the Approximate Bayesian Computation (ABC) method. Our data support the existence of two clades with different and contrasting biogeographic histories. The first clade has been present in maritime Antarctica since at least the mid-Pleistocene, with the South Orkney Islands the most likely refugial area. The second clade has a broader distribution including southern South America, South Georgia, South Shetland Islands, and the Antarctic Peninsula. The ABC method identified long-distance dispersal (LDD) colonization event(s) from southern South America to South Georgia and the maritime Antarctic after the LGM deglaciation, supporting more recent colonization of Antarctic locations. The current Antarctic and sub-Antarctic distribution of B. poppei is likely derived from two independent biogeographic events. The combination of both (1) post-LGM colonization from southern South America and (2) longer-term persistence in in situ regional refugia throughout glacial periods challenges current understanding of the biogeographic history of Antarctic freshwater biota. Re-colonization of ice-impacted Antarctic areas would have occurred following a LDD and Establishment model, pointing to the existence of possible post-dispersal barriers, despite widely assumed high passive dispersal capacity in freshwater invertebrates.
Collapse
|