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Pipoly I, Bókony V, Gaillard JM, Lemaître JF, Székely T, Liker A. Variation in adult sex ratios in tetrapods is linked to sex chromosomes through mortality differences between males and females. PLoS Biol 2025; 23:e3003156. [PMID: 40354422 DOI: 10.1371/journal.pbio.3003156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2024] [Accepted: 04/08/2025] [Indexed: 05/14/2025] Open
Abstract
Sex chromosomes can determine male and female phenotypes, and the resulting sex differences may have significant impacts on ecology and life history. One manifestation of this link is that ZW/ZZ sex-determination systems are associated with more male-skewed adult sex ratio (ASR, proportion of males in the adult population) than XX/XY systems across tetrapods (amphibians, reptiles, birds, and mammals). Here, we investigate four demographic processes: male and female offspring production, sex differences in juvenile and adult mortalities and in timing of maturation that can contribute to ASR variation between XX/XY and ZW/ZZ systems, using phylogenetic analyses of a large dataset collected from tetrapod species in the wild. We show that sex differences in adult mortality reliably predict ASR that is also more male-biased in XX/XY species than in ZW/ZZ species. Sex differences in juvenile mortality and in maturation time also contribute to ASR skews, but do not differ consistently between XX/XY and ZW/ZZ systems. Phylogenetic path analyses confirm an influence of sex-determination system on ASR through sex-biased adult mortalities. Together these results infer that sex chromosomes can impact, via demographic pathways, frequency-dependent selection emerging from the relative number of males and females. We call for follow-up studies to uncover the potentially complex web of associations between sex determination, population dynamics, and social behavior.
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Affiliation(s)
- Ivett Pipoly
- HUN-REN-PE Evolutionary Ecology Research Group, University of Pannonia, Veszprém, Hungary
- Behavioral Ecology Research Group, Center for Natural Sciences, Faculty of Engineering, University of Pannonia, Veszprém, Hungary
| | - Veronika Bókony
- Department of Evolutionary Ecology, Plant Protection Institute, HUN-REN Centre for Agricultural Research, Budapest, Hungary
| | - Jean-Michel Gaillard
- Université Lyon, CNRS, Laboratoire de Biométrie et Biologie Évolutive, Lyon, France
| | | | - Tamás Székely
- HUN-REN-DE Reproductive Strategies Research Group, University of Debrecen, Debrecen, Hungary
- Milner Centre for Evolution, Department of Life Sciences, University of Bath, Bath, United Kingdom
| | - András Liker
- HUN-REN-PE Evolutionary Ecology Research Group, University of Pannonia, Veszprém, Hungary
- Behavioral Ecology Research Group, Center for Natural Sciences, Faculty of Engineering, University of Pannonia, Veszprém, Hungary
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2
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Shealy EP, Schwartz TS, Cox RM, Reedy AM, Parrott BB. DNA methylation-based age prediction and sex-specific epigenetic aging in a lizard with female-biased longevity. SCIENCE ADVANCES 2025; 11:eadq3589. [PMID: 39888991 PMCID: PMC11784858 DOI: 10.1126/sciadv.adq3589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2024] [Accepted: 01/02/2025] [Indexed: 02/02/2025]
Abstract
Sex differences in life span are widespread across animal taxa, but their causes remain unresolved. Alterations to the epigenome are hypothesized to contribute to vertebrate aging, and DNA methylation-based aging clocks allow for quantitative estimation of biological aging trajectories. Here, we investigate the influence of age, sex, and their interaction on genome-wide DNA methylation patterns in the brown anole (Anolis sagrei), a lizard with pronounced female-biased survival and longevity. We develop a series of age predictor models and find that, contrary to our predictions, rates of epigenetic aging were not slower in female lizards. However, methylation states at loci acquiring age-associated changes appear to be more "youthful" in young females, suggesting that female DNA methylomes are preemptively fortified in early life in opposition to the direction of age-related drift. Collectively, our findings provide insights into epigenetic aging in reptiles and suggest that early-life epigenetic profiles may be more informative than rates of change for predicting sex biases in longevity.
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Affiliation(s)
- Ethan P. Shealy
- Savannah River Ecology Laboratory, University of Georgia, Aiken, SC 29802, USA
- Eugene P. Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
- Interdisciplinary Toxicology Program, University of Georgia, Athens, GA 30602, USA
| | - Tonia S. Schwartz
- Department of Biological Sciences, Auburn University, Auburn, AL 36849, USA
| | - Robert M. Cox
- Department of Biology, University of Virginia, Charlottesville, VA 22904, USA
| | - Aaron M. Reedy
- DataClassroom, 1022 Cottonwood Rd, Charlottesville, VA 22901, USA
| | - Benjamin B. Parrott
- Savannah River Ecology Laboratory, University of Georgia, Aiken, SC 29802, USA
- Eugene P. Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
- Interdisciplinary Toxicology Program, University of Georgia, Athens, GA 30602, USA
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Lemaître JF, Voituron Y, Herpe L, Veyrunes F. X*Y females exhibit steeper reproductive senescence in the African pygmy mouse. Proc Natl Acad Sci U S A 2025; 122:e2412609121. [PMID: 39739810 PMCID: PMC11725917 DOI: 10.1073/pnas.2412609121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Accepted: 11/08/2024] [Indexed: 01/02/2025] Open
Abstract
A wave of studies has recently emphasized the influence of sex chromosomes on both lifespan and actuarial senescence patterns across vertebrates and invertebrates. Basically, the heterogametic sex (XY males in XX/XY systems or ZW females in ZW/ZZ systems) typically displays a lower lifespan and a steeper rate of actuarial senescence than the homogametic sex. However, whether these effects extend to the senescence patterns of other phenotypic traits or physiological functions is yet to be determined. Here, we investigated whether sex chromosomes modulate reproductive senescence using females from the African pygmy mouse (Mus minutoides). This biological model exhibits an odd sex determining system with a third, feminizing sex chromosome, X*, resulting in three distinct female genotypes (XX, X*X, or X*Y) that coexist in natural populations. We found that the rate of senescence in litter size at birth is much more pronounced in heterogametic X*Y females than in homogametic XX or X*X females that may support the unguarded X or toxic Y hypotheses and can be directly linked to the complex and unique X*Y phenotype. A decrease in neonatal survival with mother's age has also been found, but this decline is not different between the three female genotypes.
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Affiliation(s)
- Jean-François Lemaître
- Universite Lyon 1, CNRS, Laboratoire de Biométrie et Biologie Évolutive, UMR 5558, Villeurbanne, France
| | - Yann Voituron
- Universite Claude Bernard Lyon 1, CNRS, Ecole de l’aménagement durable des territoires (ENTPE), Laboratoire d’Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), UMR 5023, VilleurbanneF-69622, France
| | - Léa Herpe
- Département de Chimie et Biochimie, Université de Moncton, Moncton, NBE1A 3E9, Canada
| | - Frédéric Veyrunes
- Institut des Sciences de l’Evolution de Montpellier, UMR 5554 (CNRS, Université Montpellier, Institut de recherche pour le développement), Montpellier34090, France
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Cayuela H, Lackey ACR, Ronget V, Monod-Broca B, Whiteman HH. Polyphenism predicts actuarial senescence and lifespan in tiger salamanders. J Anim Ecol 2024; 93:333-347. [PMID: 38279640 DOI: 10.1111/1365-2656.14048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Accepted: 12/08/2023] [Indexed: 01/28/2024]
Abstract
Actuarial senescence (called 'senescence' hereafter) often shows broad variation at the intraspecific level. Phenotypic plasticity likely plays a central role in among-individual heterogeneity in senescence rate (i.e. the rate of increase in mortality with age), although our knowledge on this subject is still very fragmentary. Polyphenism-the unique sub-type of phenotypic plasticity where several discrete phenotypes are produced by the same genotype-may provide excellent study systems to investigate if and how plasticity affects the rate of senescence in nature. In this study, we investigated whether facultative paedomorphosis influences the rate of senescence in a salamander, Ambystoma mavortium nebulosum. Facultative paedomorphosis, a unique form of polyphenism found in dozens of urodele species worldwide, leads to the production of two discrete, environmentally induced phenotypes: metamorphic and paedomorphic individuals. We leveraged an extensive set of capture-recapture data (8948 individuals, 24 years of monitoring) that were analysed using multistate capture-recapture models and Bayesian age-dependent survival models. Multistate models revealed that paedomorphosis was the most common developmental pathway used by salamanders in our study system. Bayesian age-dependent survival models then showed that paedomorphs have accelerated senescence in both sexes and shorter adult lifespan (in females only) compared to metamorphs. In paedomorphs, senescence rate and adult lifespan also varied among ponds and individuals. Females with good body condition and high lifetime reproductive success had slower senescence and longer lifespan. Late-breeding females also lived longer but showed a senescence rate similar to that of early-breeding females. Moreover, males with good condition had longer lifespan than males with poor body condition, although they had similar senescence rates. In addition, late-breeding males lived longer but, unexpectedly, had higher senescence than early-breeding males. Overall, our work provides one of the few empirical cases suggesting that environmentally cued polyphenism could affect the senescence of a vertebrate in nature, thus providing insights on the ecological and evolutionary consequences of developmental plasticity on ageing.
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Affiliation(s)
- Hugo Cayuela
- Laboratoire de Biométrie et Biologie Evolutive, Université Lyon 1, CNRS, UMR 5558, Villeurbanne, France
| | - Alycia C R Lackey
- Department of Biology, University of Louisville, Louisville, Kentucky, USA
- Department of Biological Sciences and Watershed Studies Institute, Murray State University, Murray, Kentucky, USA
| | - Victor Ronget
- Institute of Organismic and Molecular Evolution, Johannes Gutenberg University, Mainz, Germany
| | - Benjamin Monod-Broca
- Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
| | - Howard H Whiteman
- Department of Biological Sciences and Watershed Studies Institute, Murray State University, Murray, Kentucky, USA
- Rocky Mountain Biological Laboratory, Gothic, Colorado, USA
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Li S, Vazquez JM, Sudmant PH. The evolution of aging and lifespan. Trends Genet 2023; 39:830-843. [PMID: 37714733 PMCID: PMC11147682 DOI: 10.1016/j.tig.2023.08.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Revised: 08/18/2023] [Accepted: 08/21/2023] [Indexed: 09/17/2023]
Abstract
Aging is a nearly inescapable trait among organisms yet lifespan varies tremendously across different species and spans several orders of magnitude in vertebrates alone. This vast phenotypic diversity is driven by distinct evolutionary trajectories and tradeoffs that are reflected in patterns of diversification and constraint in organismal genomes. Age-specific impacts of selection also shape allele frequencies in populations, thus impacting disease susceptibility and environment-specific mortality risk. Further, the mutational processes that spawn this genetic diversity in both germline and somatic cells are strongly influenced by age and life history. We discuss recent advances in our understanding of the evolution of aging and lifespan at organismal, population, and cellular scales, and highlight outstanding questions that remain unanswered.
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Affiliation(s)
- Stacy Li
- Department of Integrative Biology, University of California, Berkeley, CA, USA; Center for Computational Biology, University of California, Berkeley, CA. USA
| | - Juan Manuel Vazquez
- Department of Integrative Biology, University of California, Berkeley, CA, USA
| | - Peter H Sudmant
- Department of Integrative Biology, University of California, Berkeley, CA, USA; Center for Computational Biology, University of California, Berkeley, CA. USA.
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Connallon T, Beasley IJ, McDonough Y, Ruzicka F. How much does the unguarded X contribute to sex differences in life span? Evol Lett 2022; 6:319-329. [PMID: 35937469 PMCID: PMC9346086 DOI: 10.1002/evl3.292] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Revised: 04/22/2022] [Accepted: 06/12/2022] [Indexed: 11/09/2022] Open
Abstract
Females and males often have markedly different mortality rates and life spans, but it is unclear why these forms of sexual dimorphism evolve. The unguarded X hypothesis contends that dimorphic life spans arise from sex differences in X or Z chromosome copy number (i.e., one copy in the "heterogametic" sex; two copies in the "homogametic" sex), which leads to a disproportionate expression of deleterious mutations by the heterogametic sex (e.g., mammalian males; avian females). Although data on adult sex ratios and sex-specific longevity are consistent with predictions of the unguarded X hypothesis, direct experimental evidence remains scant, and alternative explanations are difficult to rule out. Using a simple population genetic model, we show that the unguarded X effect on sex differential mortality is a function of several reasonably well-studied evolutionary parameters, including the proportion of the genome that is sex linked, the genomic deleterious mutation rate, the mean dominance of deleterious mutations, the relative rates of mutation and strengths of selection in each sex, and the average effect of mutations on survival and longevity relative to their effects on fitness. We review published estimates of these parameters, parameterize our model with them, and show that unguarded X effects are too small to explain observed sex differences in life span across species. For example, sex differences in mean life span are known to often exceed 20% (e.g., in mammals), whereas our parameterized models predict unguarded X effects of a few percent (e.g., 1-3% in Drosophila and mammals). Indeed, these predicted unguarded X effects fall below statistical thresholds of detectability in most experiments, potentially explaining why direct tests of the hypothesis have generated little support for it. Our results suggest that evolution of sexually dimorphic life spans is predominantly attributable to other mechanisms, potentially including "toxic Y" effects and sexual dimorphism for optimal investment in survival versus reproduction.
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Affiliation(s)
- Tim Connallon
- School of Biological SciencesMonash UniversityClaytonVIC3800Australia
| | - Isobel J. Beasley
- School of BioSciencesThe University of MelbourneParkvilleVIC3010Australia
- Melbourne Integrative GenomicsThe University of MelbourneParkvilleVIC3010Australia
- St. Vincent's Institute of Medical ResearchFitzroyVIC3065Australia
| | - Yasmine McDonough
- School of Biological SciencesMonash UniversityClaytonVIC3800Australia
| | - Filip Ruzicka
- School of Biological SciencesMonash UniversityClaytonVIC3800Australia
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Nemesházi E, Bókony V. Asymmetrical sex reversal: Does the type of heterogamety predict propensity for sex reversal? Bioessays 2022; 44:e2200039. [PMID: 35543235 DOI: 10.1002/bies.202200039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Revised: 04/12/2022] [Accepted: 04/29/2022] [Indexed: 11/10/2022]
Abstract
Sex reversal, a mismatch between phenotypic and genetic sex, can be induced by chemical and thermal insults in ectotherms. Therefore, climate change and environmental pollution may increase sex-reversal frequency in wild populations, with wide-ranging implications for sex ratios, population dynamics, and the evolution of sex determination. We propose that reconsidering the half-century old theory "Witschi's rule" should facilitate understanding the differences between species in sex-reversal propensity and thereby predicting their vulnerability to anthropogenic environmental change. The idea is that sex reversal should be asymmetrical: more likely to occur in the homogametic sex, assuming that sex-reversed heterogametic individuals would produce new genotypes with reduced fitness. A review of the existing evidence shows that while sex reversal can be induced in both homogametic and heterogametic individuals, the latter seem to require stronger stimuli in several cases. We provide guidelines for future studies on sex reversal to facilitate data comparability and reliability.
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Affiliation(s)
- Edina Nemesházi
- Conservation Genetics Research Group, Department of Ecology, University of Veterinary Medicine Budapest, Budapest, Hungary
| | - Veronika Bókony
- Conservation Genetics Research Group, Department of Ecology, University of Veterinary Medicine Budapest, Budapest, Hungary.,Lendület Evolutionary Ecology Research Group, Plant Protection Institute, Centre for Agricultural Research, Eötvös Loránd Research Network, Budapest, Hungary
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