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KIR2DL2, KIR2DL5A and KIR2DL5B Genes Induce Susceptibility to Dengue Virus Infection, while KIR3DL3 and KIR2DS5 Confer Protection. Mediterr J Hematol Infect Dis 2022; 14:e2022075. [PMID: 36425145 PMCID: PMC9652005 DOI: 10.4084/mjhid.2022.075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Accepted: 10/13/2022] [Indexed: 01/25/2023] Open
Abstract
BACKGROUND AND OBJECTIVES Dengue fever (DF), an emerging and re-emerging viral disease, is a major public health problem. The aim of this study was to investigate the influence of KIRs genes polymorphism and KIRs genotypes in susceptibility to dengue virus infection and disease severity in a population from Burkina Faso through a case-control study. METHODS KIRs genes determination was performed using PCR-SSP in 50 patients infected by dengue virus (DENV) and 54 Healthy controls (HC) subjects who had never been infected. RESULTS Data analysis showed significant association between frequencies of three KIR genes and dengue virus infection (DF): KIR2DL2 (OR: 7.32; IC: 2.87-18.65; P < 0.001); KIR2DL5A (OR: 15.00, IC: 5.68-39.59; P < 0.001) and KIR2DL5B (OR: 11.43; IC: 4.42-29; P < 0.001). While, KIR3DL3 (OR: 0.13, IC: 0.052-0.32; P < 0.001) and KIR2DS5 (OR: 0.12; IC: 0.04-0.30; P < 0.001) were associated with protection against DF. KIR2DL4 (OR: 9.75; IC95%: 1.33-70.97; p: 0.03) and KIRD3DL1 (OR: 12.00; IC95%: 1.60-90.13; p: 0.02) were associated with an increased risk in the development of secondary dengue infection (SDI). CONCLUSION The results suggest a contribution of KIR2DL2, KIR2DL5A, and KIR2DL5B genes in the susceptibility of DF development. In contrast, KIR3DL3 and KIR2DS5 were associated with protection against DF development by enhancing both innate and acquired immune responses.
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Elpidio LNS, de Moraes AG, Langer IBV, do Amaral GC, Moretti ML, Garcia MT, Angerami R, Proenca-Modena JL, Bispo-Dos-Santos K, Martini MC, Parise PL, Ayo CM, de Mattos LC, Brandão CC, Nogueira ML, Oliani DCMV, Spegiorin LCJF, de Lima Neto QA, Visentainer JEL. Lack of association of the KIR and HLA class I ligands with ZIKV infection in south and southeast of Brazil. Mem Inst Oswaldo Cruz 2022; 117:e210194. [PMID: 35976280 PMCID: PMC9377541 DOI: 10.1590/0074-02760210194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Accepted: 07/25/2022] [Indexed: 11/22/2022] Open
Abstract
BACKGROUND Zika virus (ZIKV) is an emerging arbovirus associated with foetal
malformations and neurological complications. The infection is usually
associated with mild symptoms. The comparison between the allelic frequency
of polymorphic genes in symptomatic infected individuals in the population
can clarify the pathogenic mechanisms of ZIKV. During ZIKV infection,
cytokines are produced and natural killer (NK) cells are recruited, whose
activation depends on signaling pathways activated by specific receptors,
such as killer cell immunoglobulin-like receptors (KIR). These molecules
interact with human leukocyte antigen (HLA) class I ligands and are encoded
by polymorphic genes. OBJECTIVES This study aimed to evaluate the frequency of allelic variants of the genes
encoding the KIR receptors and their HLA class I ligands in
139 symptomatic ZIKV-patients and 170 controls negative for the virus, and
to evaluate the role of these variants for ZIKV susceptibility. METHODS KIR and HLA class I genes were genotyped
using the polymerase chain reaction-sequence specific oligonucleotide
(PCR-SSO) technique. FINDINGS No significant differences in the frequency distribution of
KIRs and KIR-HLA in patients compared to controls were
observed. MAIN CONCLUSIONS KIR and its HLA ligands might play a minor role in ZIKV infection in the
south and southeast Brazilian individuals.
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Affiliation(s)
- Laise Nayana Sala Elpidio
- Universidade Estadual de Maringá, Programa de Pós-Graduação em Biociências e Fisiopatologia, Departamento de Análises Clínicas e Biomedicina, Maringá, PR, Brasil
| | - Amarilis Giaretta de Moraes
- Universidade Estadual de Maringá, Programa de Pós-Graduação em Biociências e Fisiopatologia, Departamento de Análises Clínicas e Biomedicina, Maringá, PR, Brasil
| | | | | | - Maria Luiza Moretti
- Universidade Estadual de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Interna, Campinas, SP, Brasil
| | - Márcia Teixeira Garcia
- Universidade Estadual de Campinas, Divisão de Epidemiologia Hospitalar, Hospital das Clínicas, Campinas, SP, Brasil
| | - Rodrigo Angerami
- Departamento de Vigilância em Saúde Pública de Campinas, Campinas, SP, Brasil
| | - José Luiz Proenca-Modena
- Universidade Estadual de Campinas, Instituto de Biologia, Departamento de Genética, Microbiologia e Imunologia, Laboratório de Vírus Emergentes, Campinas, SP, Brasil
| | - Karina Bispo-Dos-Santos
- Universidade Estadual de Campinas, Instituto de Biologia, Departamento de Genética, Microbiologia e Imunologia, Laboratório de Vírus Emergentes, Campinas, SP, Brasil
| | - Matheus Cavalheiro Martini
- Universidade Estadual de Campinas, Instituto de Biologia, Departamento de Genética, Microbiologia e Imunologia, Laboratório de Vírus Emergentes, Campinas, SP, Brasil
| | - Pierina Lorencini Parise
- Universidade Estadual de Campinas, Instituto de Biologia, Departamento de Genética, Microbiologia e Imunologia, Laboratório de Vírus Emergentes, Campinas, SP, Brasil
| | - Christiane Maria Ayo
- Faculdade de Medicina de São José do Rio Preto, Departamento de Biologia Molecular, Laboratório de Imunogenética, São José do Rio Preto, SP, Brasil
| | - Luiz Carlos de Mattos
- Faculdade de Medicina de São José do Rio Preto, Departamento de Biologia Molecular, Laboratório de Imunogenética, São José do Rio Preto, SP, Brasil
| | - Cinara Cássia Brandão
- Faculdade de Medicina de São José do Rio Preto, Departamento de Biologia Molecular, Laboratório de Imunogenética, São José do Rio Preto, SP, Brasil
| | - Maurício Lacerda Nogueira
- Faculdade de Medicina de São José do Rio Preto, Departamento de Doenças Infecciosas e Parasitárias, Laboratório de Pesquisa em Virologia, São José do Rio Preto, SP, Brasil
| | - Denise Cristina Mós Vaz Oliani
- Faculdade de Medicina de São José do Rio Preto, Departamento de Ginecologia e Obstetrícia, São José do Rio Preto, SP, Brasil
| | | | - Quirino Alves de Lima Neto
- Universidade Estadual de Maringá, Programa de Pós-Graduação em Biociências e Fisiopatologia, Departamento de Análises Clínicas e Biomedicina, Maringá, PR, Brasil.,Universidade Estadual de Maringá, Laboratório de Imunogenética, Maringá, PR, Brasil
| | - Jeane Eliete Laguila Visentainer
- Universidade Estadual de Maringá, Programa de Pós-Graduação em Biociências e Fisiopatologia, Departamento de Análises Clínicas e Biomedicina, Maringá, PR, Brasil.,Universidade Estadual de Maringá, Laboratório de Imunogenética, Maringá, PR, Brasil
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Chaisri S, Jayaraman J, Mongkolsapaya J, Duangchinda T, Jumniansong A, Trowsdale J, Traherne JA, Leelayuwat C. KIR copy number variations in dengue-infected patients from northeastern Thailand. Hum Immunol 2022; 83:328-334. [DOI: 10.1016/j.humimm.2022.01.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2021] [Revised: 12/16/2021] [Accepted: 01/07/2022] [Indexed: 11/04/2022]
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Tian Y, Babor M, Lane J, Seumois G, Liang S, Goonawardhana NDS, De Silva AD, Phillips EJ, Mallal SA, da Silva Antunes R, Grifoni A, Vijayanand P, Weiskopf D, Peters B, Sette A. Dengue-specific CD8+ T cell subsets display specialized transcriptomic and TCR profiles. J Clin Invest 2019; 129:1727-1741. [PMID: 30882366 DOI: 10.1172/jci123726] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Accepted: 02/05/2019] [Indexed: 12/31/2022] Open
Abstract
Accumulating evidence demonstrates that CD8+ T cells contribute to protection from severe dengue virus (DENV) disease and vaccine efficacy. Nevertheless, molecular programs associated with DENV-specific CD8+ T cell subsets have not been defined. Here, we studied the transcriptomic profiles of human DENV-specific CD8+ T cells isolated after stimulation with DENV epitopes from donors who had been infected with DENV multiple times and would therefore be expected to have significant levels of adaptive immunity. We found that DENV-specific CD8+ T cells mainly consisted of effector memory subsets, namely CD45RA-CCR7- effector memory (Tem) and CD45RA+CCR7- effector memory re-expressing CD45RA (Temra) cells, which enacted specific gene expression profiles upon stimulation with cognate antigens. DENV-specific CD8+ T cell subsets in general, and Temra cells in particular, were fully activated and polyfunctional, yet associated with relatively narrow transcriptional responses. Furthermore, we found that DENV-specific CD8+ Tem and Temra cells showed some unique T cell receptor features in terms of overlap and variable (V) gene usage. This study provides a transcriptomic definition of DENV-specific activated human CD8+ T cell subsets and defines a benchmark profile that vaccine-specific responses could aim to reproduce.
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Affiliation(s)
- Yuan Tian
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA
| | - Mariana Babor
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA
| | - Jerome Lane
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA
| | - Grégory Seumois
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA
| | - Shu Liang
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA
| | - N D Suraj Goonawardhana
- Department of Paraclinical Sciences, General Sir John Kotelawala Defense University, Ratmalana, Sri Lanka
| | - Aruna D De Silva
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA.,Department of Paraclinical Sciences, General Sir John Kotelawala Defense University, Ratmalana, Sri Lanka
| | - Elizabeth J Phillips
- Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA.,Institute for Immunology and Infectious Diseases, Murdoch University, Murdoch, Western Australia, Australia
| | - Simon A Mallal
- Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA.,Institute for Immunology and Infectious Diseases, Murdoch University, Murdoch, Western Australia, Australia
| | | | - Alba Grifoni
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA
| | - Pandurangan Vijayanand
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA
| | - Daniela Weiskopf
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA
| | - Bjoern Peters
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA.,Department of Medicine, UCSD, La Jolla, California, USA
| | - Alessandro Sette
- Division of Vaccine Discovery, La Jolla Institute for Immunology, La Jolla, California, USA.,Department of Medicine, UCSD, La Jolla, California, USA
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Maucourant C, Petitdemange C, Yssel H, Vieillard V. Control of Acute Arboviral Infection by Natural Killer Cells. Viruses 2019; 11:v11020131. [PMID: 30709036 PMCID: PMC6410043 DOI: 10.3390/v11020131] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Revised: 01/28/2019] [Accepted: 01/31/2019] [Indexed: 12/15/2022] Open
Abstract
The recent explosive pandemic of chikungunya virus (CHIKV) followed by Zika (ZIKV) virus infections occurring throughout many countries represents the most unexpected arrival of arthropod-borne viral diseases in the past 20 years. Transmitted through the bite of Aedes mosquitoes, the clinical picture associated with these acute arbovirus infections, including Dengue (DENV), CHIKV and ZIKV, ranges from classical febrile illness to life-threatening disease. Whereas ZIKV and CHIKV-mediated infections have previously been recognized as relatively benign diseases, in contrast to Dengue fever, recent epidemic events have brought waves of increased morbidity and mortality leading to a serious public health problem. Although the host immune response plays a crucial role in controlling infections, it may also promote viral spread and immunopathology. Here, we review recent developments in our understanding of the immune response, with an emphasis on the early antiviral immune response mediated by natural killer cells and emphasize their Janus-faced effects in the control of arbovirus infection and pathogenesis. Improving our understanding knowledge on of the mechanisms that control viral infection is crucial in the current race against the globalization of arbovirus epidemics.
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Affiliation(s)
- Christopher Maucourant
- Sorbonne Université, UPMC Univ Paris 06, Inserm U1135, CNRS ERL8255, Centre d'Immunologie et des Maladies Infectieuses (CIMI-Paris), 75013 Paris, France.
| | - Caroline Petitdemange
- Institut Gustave Roussy, CNRS UMR9196, Unité Physiologie et Pathologie Moléculaires des Rétrovirus Endogènes et Infectieux, 94800 Villejuif, France.
| | - Hans Yssel
- Sorbonne Université, UPMC Univ Paris 06, Inserm U1135, CNRS ERL8255, Centre d'Immunologie et des Maladies Infectieuses (CIMI-Paris), 75013 Paris, France.
| | - Vincent Vieillard
- Sorbonne Université, UPMC Univ Paris 06, Inserm U1135, CNRS ERL8255, Centre d'Immunologie et des Maladies Infectieuses (CIMI-Paris), 75013 Paris, France.
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Mathew A. Defining the role of NK cells during dengue virus infection. Immunology 2018; 154:557-562. [PMID: 29570783 PMCID: PMC6050221 DOI: 10.1111/imm.12928] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2018] [Revised: 03/05/2018] [Accepted: 03/06/2018] [Indexed: 02/06/2023] Open
Abstract
In recent years, our understanding of the complex number of signals that need to be integrated between a diverse number of receptors present on natural killer (NK) cells and ligands present on target cells has improved. Here, we review the progress made in identifying interactions between dengue viral peptides presented on HLA Class 1 molecules with inhibitory and activating killer-like immunoglobulin receptors on NK cells, direct interactions of viral proteins with NK cell receptors, the involvement of dengue virus-specific antibodies in mediating antibody-dependent cell-mediated cytotoxicity and the role of soluble factors in modulating NK cell responses. We discuss findings of NK cell activation early after natural dengue infection, and point to the role that NK cells may play in regulating both innate and adaptive immune responses, in the context of our new appreciation of interactions of dengue virus with specific NK cell receptors. With a number of flavivirus vaccine candidates in clinical trials, how NK cells respond to attenuated dengue virus and subunit protein vaccine candidates and shape adaptive immunity will need to be considered.
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Affiliation(s)
- Anuja Mathew
- Department of Cell and Molecular BiologyInstitute for Immunology and InformaticsProvidenceRIUSA
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Reduced frequency of two activating KIR genes in patients with sepsis. Hum Immunol 2017; 78:363-369. [PMID: 28213050 DOI: 10.1016/j.humimm.2017.02.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2016] [Revised: 02/07/2017] [Accepted: 02/11/2017] [Indexed: 12/20/2022]
Abstract
Natural killer (NK) cell activity is regulated by activating and inhibitory signals transduced by killer cell immunoglobulin-like receptors (KIR). Diversity in KIR gene repertoire among individuals may affect disease outcome. Sepsis development and severity may be influenced by genetic factors affecting the immune response. Here, we examined sixteen KIR genes and their human leucocyte antigen (HLA) class I ligands in critical patients, aiming to identify patterns that could be associated with sepsis. Male and female patients (ages ranging between 14 and 94years-old) were included. DNA samples from 211 patients with sepsis and 60 controls (critical care patients with no sepsis) collected between 2004 and 2010 were included and genotyped for KIR genes using the polymerase chain reaction method with sequence-specific oligonucleotide (PCR-SSO), and for HLA genes using the polymerase chain reaction method with sequence-specific primers (PCR-SSP). The frequencies of activating KIR2DS1 and KIR3DS1 in sepsis patients when compared to controls were 41.23% versus 55.00% and 36.49% versus 51.67% (p=0.077 and 0.037 respectively before Bonferroni correction). These results indicate that activating KIR genes 2DS1 and 3DS1 may more prevalent in critical patients without sepsis than in patients with sepsis, suggesting a potential protective role of activating KIR genes in sepsis.
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